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{"work":{"id":7556382,"created_at":"2014-07-04T05:12:37.120-07:00","from_world_paper_id":125281663,"updated_at":"2024-11-12T12:16:48.970-08:00","_data":{"grobid_abstract":"Background: Citrus canker is a disease that has severe economic impact on the citrus industry worldwide. There are three types of canker, called A, B, and C. The three types have different phenotypes and affect different citrus species. The causative agent for type A is Xanthomonas citri subsp. citri, whose genome sequence was made available in 2002. Xanthomonas fuscans subsp. aurantifolii strain B causes canker B and Xanthomonas fuscans subsp. aurantifolii strain C causes canker C.","publication_date":"2010,,","publication_name":"BMC Genomics","grobid_abstract_attachment_id":"34117310"},"document_type":"paper","pre_hit_view_count_baseline":null,"quality":"high","language":"en","title":"Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii","broadcastable":true,"draft":null,"has_indexable_attachment":true,"indexable":true}}["work"]; window.loswp.workCoauthors = [13574656]; window.loswp.locale = "en"; window.loswp.countryCode = "SG"; window.loswp.cwvAbTestBucket = ""; window.loswp.designVariant = "ds_vanilla"; window.loswp.fullPageMobileSutdModalVariant = "full_page_mobile_sutd_modal"; window.loswp.useOptimizedScribd4genScript = false; window.loswp.appleClientId = 'edu.academia.applesignon';</script><script defer="" 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class="ds-work-cover--hover-container"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">download</span><p>Download Free PDF</p></div><div class="ds-work-cover--ribbon-container">Download Free PDF</div><div class="ds-work-cover--ribbon-triangle"></div></button></div></div></div><div class="ds-work-card--work-information"><h1 class="ds-work-card--work-title">Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii</h1><div class="ds-work-card--work-authors ds-work-card--detail"><a class="ds-work-card--author js-wsj-grid-card-author ds2-5-body-md ds2-5-body-link" data-author-id="13574656" href="https://usp-br.academia.edu/AlinedaSilva"><img alt="Profile image of Aline da Silva" class="ds-work-card--author-avatar" src="https://gravatar.com/avatar/35e6a5d554b515d096b78dee34631322?s=65" />Aline da Silva</a></div><p class="ds-work-card--detail ds2-5-body-sm">2010, BMC 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data-client_id="331998490334-rsn3chp12mbkiqhl6e7lu2q0mlbu0f1b" data-doc_id="34117310" data-landing_url="https://www.academia.edu/7556382/Novel_insights_into_the_genomic_basis_of_citrus_canker_based_on_the_genome_sequences_of_two_strains_of_Xanthomonas_fuscans_subsp_aurantifolii" data-login_uri="https://www.academia.edu/registrations/google_one_tap" data-moment_callback="onGoogleOneTapEvent" id="g_id_onload"></div><div class="ds-top-related-works--grid-container"><div class="ds-related-content--container ds-top-related-works--container"><h2 class="ds-related-content--heading">Related papers</h2><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="0" data-entity-id="117954842" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/117954842/Genetic_Relationship_among_Worldwide_Strains_of_Xanthomonas_Causing_Canker_in_Citrus_Species_and_Design_of_New_Primers_for_Their_Identification_by_PCR">Genetic Relationship among Worldwide Strains of Xanthomonas Causing Canker in Citrus Species and Design of New Primers for Their Identification by PCR</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="33304568" href="https://independent.academia.edu/CuberoJ">J. Cubero</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Applied and Environmental Microbiology, 2002</p><p class="ds-related-work--abstract ds2-5-body-sm">Partial sequence analysis of the ribosomal operon in Xanthomonas axonopodis allowed discrimination among strains causing the A, B, and C types of citrus bacterial canker (CBC) and quantification of the relationship of these organisms with other species and pathovars in the same genus. Sets of primers based on sequence differences in the internally transcribed spacer and on a sequence from the plasmid gene pthA involved in virulence were designed for specific identification of xanthomonads causing CBC diseases. The two sets were validated with a collection of Xanthomonas strains associated with citrus species. The primer set based on ribosomal sequences had a high level of specificity for X. axonopodis pv. citri, whereas the set based on the pthA gene was universal for all types of CBC organisms. Moreover, the relationships among worldwide Xanthomonas strains causing CBC were analyzed by amplification of repetitive sequences (enterobacterial repetitive intergenic consensus and BOX el...</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Genetic Relationship among Worldwide Strains of Xanthomonas Causing Canker in Citrus Species and Design of New Primers for Their Identification by PCR","attachmentId":113691574,"attachmentType":"pdf","work_url":"https://www.academia.edu/117954842/Genetic_Relationship_among_Worldwide_Strains_of_Xanthomonas_Causing_Canker_in_Citrus_Species_and_Design_of_New_Primers_for_Their_Identification_by_PCR","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/117954842/Genetic_Relationship_among_Worldwide_Strains_of_Xanthomonas_Causing_Canker_in_Citrus_Species_and_Design_of_New_Primers_for_Their_Identification_by_PCR"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="1" data-entity-id="92987199" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/92987199/Identification_of_New_Genes_Related_to_Virulence_of_i_Xanthomonas_axonopodis_i_Pv_i_Citri_i_during_Citrus_Host_Interactions">Identification of New Genes Related to Virulence of <i>Xanthomonas axonopodis</i> Pv. <i>Citri</i> during Citrus Host Interactions</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="228493499" href="https://independent.academia.edu/JesusAparecidoFerro">Jesus Aparecido Ferro</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Advances in Microbiology, 2017</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Identification of New Genes Related to Virulence of \u003ci\u003eXanthomonas axonopodis\u003c/i\u003e Pv. \u003ci\u003eCitri\u003c/i\u003e during Citrus Host Interactions","attachmentId":95849790,"attachmentType":"pdf","work_url":"https://www.academia.edu/92987199/Identification_of_New_Genes_Related_to_Virulence_of_i_Xanthomonas_axonopodis_i_Pv_i_Citri_i_during_Citrus_Host_Interactions","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/92987199/Identification_of_New_Genes_Related_to_Virulence_of_i_Xanthomonas_axonopodis_i_Pv_i_Citri_i_during_Citrus_Host_Interactions"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="2" data-entity-id="78841550" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/78841550/CitrusKB_A_Comprehensive_Knowledge_Base_for_Transcriptome_and_Interactome_of_Citrus_spp_Infected_by_Xanthomonas_citri_subsp_citri_at_Different_Infection_Stages">CitrusKB: A Comprehensive Knowledge Base for Transcriptome and Interactome of Citrus spp. Infected by Xanthomonas citri subsp. citri at Different Infection Stages</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="33064988" href="https://iapar.academia.edu/RuiPereiraLeiteJunior">Rui Pereira Leite Junior</a></div><p class="ds-related-work--metadata ds2-5-body-xs">2020</p><p class="ds-related-work--abstract ds2-5-body-sm">Citrus canker type A is a serious disease caused by Xanthomonas citri subsp. citri (X. citri), which is responsible for severe losses to growers and to the citrus industry worldwide. To date, no canker-resistant citrus genotypes are available, and there is limited information regarding the molecular and genetic mechanisms involved in the early stages of the citrus canker development. Here, we present the knowledge base for transcriptome of in vivo citrus interactome, the CitrusKB. This is the first in vivo interactome database for different citrus cultivars, and it was produced to provide a valuable source of information on citrus and their interaction with the citrus canker bacterium X. citri. The database provides tools for a user-friendly web interface to search and analyze a large amount of information regarding eight citrus cultivars with distinct levels of susceptibility to the disease and their interaction, at different stages of infection, with the citrus canker bacterium X....</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"CitrusKB: A Comprehensive Knowledge Base for Transcriptome and Interactome of Citrus spp. Infected by Xanthomonas citri subsp. citri at Different Infection Stages","attachmentId":85743076,"attachmentType":"pdf","work_url":"https://www.academia.edu/78841550/CitrusKB_A_Comprehensive_Knowledge_Base_for_Transcriptome_and_Interactome_of_Citrus_spp_Infected_by_Xanthomonas_citri_subsp_citri_at_Different_Infection_Stages","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/78841550/CitrusKB_A_Comprehensive_Knowledge_Base_for_Transcriptome_and_Interactome_of_Citrus_spp_Infected_by_Xanthomonas_citri_subsp_citri_at_Different_Infection_Stages"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="3" data-entity-id="118325241" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/118325241/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_i_Xanthomonas_citri_i_and_reduce_citrus_canker_disease_severity">Bacteria from the citrus phylloplane can disrupt cell-cell signalling in<i>Xanthomonas citri</i>and reduce citrus canker disease severity</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="228493499" href="https://independent.academia.edu/JesusAparecidoFerro">Jesus Aparecido Ferro</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Plant Pathology, 2015</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Bacteria from the citrus phylloplane can disrupt cell-cell signalling in\u003ci\u003eXanthomonas citri\u003c/i\u003eand reduce citrus canker disease severity","attachmentId":113979152,"attachmentType":"pdf","work_url":"https://www.academia.edu/118325241/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_i_Xanthomonas_citri_i_and_reduce_citrus_canker_disease_severity","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/118325241/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_i_Xanthomonas_citri_i_and_reduce_citrus_canker_disease_severity"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="4" data-entity-id="11833314" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/11833314/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_">Transcriptional analysis of the sweet orange interaction with the citrus canker pathogens Xanthomonas axonopodis pv. citri and Xanthomonas axonopodis pv. …</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="29198179" href="https://independent.academia.edu/CelsoBenedetti">Celso Benedetti</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Molecular plant …, 2008</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Transcriptional analysis of the sweet orange interaction with the citrus canker pathogens Xanthomonas axonopodis pv. citri and Xanthomonas axonopodis pv. …","attachmentId":46496740,"attachmentType":"pdf","work_url":"https://www.academia.edu/11833314/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/11833314/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="5" data-entity-id="122869956" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/122869956/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_Xanthomonas_citri_and_reduce_citrus_canker_disease_severity">Bacteria from the citrus phylloplane can disrupt cell–cell signalling in Xanthomonas citri and reduce citrus canker disease severity</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="243689944" href="https://independent.academia.edu/KatiaKupper">Katia Kupper</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Plant Pathology, 2015</p><p class="ds-related-work--abstract ds2-5-body-sm">Xanthomonas citri subsp. citri (Xcc) is the causal agent of citrus canker, a disease that affects almost all types of citrus crops. Production of particular Xcc pathogenicity factors is controlled by a gene cluster rpf, which encodes elements of a cell–cell communication system called quorum sensing (QS), mediated by molecules of the diffusible signal factor (DSF) family. Interference with cell–cell signalling, also termed quorum quenching, either by signal degradation or over‐production, has been suggested as a strategy to control bacterial disease. In this study, three bacterial strains were isolated from citrus leaves that displayed the ability to disrupt QS signalling in Xcc. Pathogenicity assays in sweet orange (Citrus sinensis) showed that bacteria of the genera Pseudomonas and Bacillus also have a strong ability to reduce the severity of citrus canker disease. These effects were associated with alteration in bacterial attachment and biofilm formation, factors that are known t...</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Bacteria from the citrus phylloplane can disrupt cell–cell signalling in Xanthomonas citri and reduce citrus canker disease severity","attachmentId":117441253,"attachmentType":"pdf","work_url":"https://www.academia.edu/122869956/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_Xanthomonas_citri_and_reduce_citrus_canker_disease_severity","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/122869956/Bacteria_from_the_citrus_phylloplane_can_disrupt_cell_cell_signalling_in_Xanthomonas_citri_and_reduce_citrus_canker_disease_severity"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="6" data-entity-id="44569931" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/44569931/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_aurantifolii">Transcriptional analysis of the sweet orange interaction with the citrus canker pathogens Xanthomonas axonopodis pv. citri and Xanthomonas axonopodis pv. aurantifolii</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="10803238" href="https://uesc.academia.edu/LucianaR">LUCIANA R O D R I G U E S CAMILLO</a><span>, </span><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="180547412" href="https://independent.academia.edu/RaulCernadas">Raúl Cernadas</a></div><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Transcriptional analysis of the sweet orange interaction with the citrus canker pathogens Xanthomonas axonopodis pv. citri and Xanthomonas axonopodis pv. aurantifolii","attachmentId":65025549,"attachmentType":"pdf","work_url":"https://www.academia.edu/44569931/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_aurantifolii","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/44569931/Transcriptional_analysis_of_the_sweet_orange_interaction_with_the_citrus_canker_pathogens_Xanthomonas_axonopodis_pv_citri_and_Xanthomonas_axonopodis_pv_aurantifolii"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" 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Species","attachmentId":74098478,"attachmentType":"pdf","work_url":"https://www.academia.edu/60825231/Genomics_of_Xanthomonas_citri_and_Related_Species","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/60825231/Genomics_of_Xanthomonas_citri_and_Related_Species"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="8" data-entity-id="12563037" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" 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translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/12563037/COMPARATIVE_GENOMICS_ANALYSES_OF_CITRUS_ASSOCIATED_BACTERIA"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="9" data-entity-id="30814283" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/30814283/Over_expression_of_the_citrus_gene_CtNH1_confers_resistance_to_bacterial_canker_disease">Over-expression of the citrus gene CtNH1 confers resistance to bacterial canker disease</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" 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