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<!DOCTYPE html> <html lang="en-gb"> <head> <title>Ensembl Tools</title> <!--[if lte IE 7]><link rel="stylesheet" type="text/css" media="all" href="/minified/98adc89a8b4418c03a4c81d5bf76272d.ie7.css"/><![endif]--><!--[if gt IE 7]><link rel="stylesheet" type="text/css" media="all" href="/minified/98adc89a8b4418c03a4c81d5bf76272d.css"/><![endif]--><!--[if !IE]><!--><link rel="stylesheet" type="text/css" media="all" href="/minified/98adc89a8b4418c03a4c81d5bf76272d.css"/><!--<![endif]--><!--[if lte IE 7]><link rel="stylesheet" type="text/css" media="all" href="/minified/9bafd8bb591fb39bcb766b0160434c45.image.ie7.css"/><![endif]--><!--[if gt IE 7]><link rel="stylesheet" type="text/css" media="all" href="/minified/9bafd8bb591fb39bcb766b0160434c45.image.css"/><![endif]--><!--[if !IE]><!--><link rel="stylesheet" type="text/css" media="all" href="/minified/9bafd8bb591fb39bcb766b0160434c45.image.css"/><!--<![endif]--> <link href="/i/ensembl-favicon.png" rel="icon" type="image/png" /> <link type="image/png" href="/apple-touch-icon.png" rel="apple-touch-icon" /> <link type="application/opensearchdescription+xml" title="Ensembl (All)" href="//useast.ensembl.org/opensearch/all.xml" rel="search" /> <meta name="google-site-verification" content="tG3WW0bg9gNaIHH002gJl-fV2k0bzf-ZxC8pBqXTaNo" /> <meta name="viewport" content="target-densitydpi=device-dpi, width=device-width, initial-scale=1.0, maximum-scale=2.0, user-scalable=yes" /> <script>var prefetch = ['/minified/8b49a46e34da8ff984905ba1470c2f54.png','/minified/9cf07063d9febd1e9344ca4a6cc02cb1.png','/minified/ff8270b50aa958c83f1fe0c29e61a75a.png','/minified/95cdc75b8720f22b080d415a4915e7a1.png','/minified/f37021b24ed3c44d7252707733a6c8e3.png','/minified/79a5fb49f716554891451d08438ee679.png','/minified/d2faa6d6cba3f9fe2b841c9ca08bb867.jpg'];</script> </head> <body class="ie ie7 ie67 static" id="ensembl-webpage" data-pace="2"> <div id="min_width_container"> <div id="min_width_holder"> <!-- Announcement Banner --> <!-- /Announcement Banner --> <div id="masthead" class="js_panel"> <input type="hidden" class="panel_type" value="Masthead" /> <div class="logo_holder"><a href="/"><div class="logo-header print_hide" title="Ensembl mirror">&nbsp;</div></a><img src="/i/e-ensembl_print.gif" alt="Ensembl mirror" title="Ensembl mirror" class="screen_hide_inline" style="width:170px;height:45px" /></div> <div class="mh print_hide"> <div class="account_holder"><div class="_account_holder"><div class="account-loading">Loading&hellip;</div><form action="/Ajax/accounts_dropdown"></form></div></div> <div class="tools_holder"><ul class="tools"><li><a class="constant" href="/Multi/Tools/Blast">BLAST/BLAT</a></li><li><a class="constant" href="/info/docs/tools/vep/">VEP</a></li><li><a class="constant" href="/info/docs/tools/index.html">Tools</a></li><li><a class="constant" href="/biomart/martview">BioMart</a></li><li><a class="constant" rel="nofollow" href="/info/data/">Downloads</a></li><li><a class="constant" rel="nofollow" href="/info/">Help &amp; 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software">API</a></li><li class=" short_tab" style="display:none"><a href="/info/about/" title="About us">About</a></li><li class=" long_tab" style="display:block"><a href="/info/website/">Using this website</a></li><li class=" long_tab" style="display:block"><a href="/info/genome/">Annotation and prediction</a></li><li class=" long_tab" style="display:block"><a href="/info/data/">Data access</a></li><li class=" active long_tab" style="display:block"><a href="/info/docs/">API &amp; software</a></li><li class=" long_tab" style="display:block"><a href="/info/about/">About us</a></li></ul></div> </div> <div id="main_holder"> <div id="page_nav_wrapper"> <div id="page_nav" class="nav print_hide js_panel floating"> <input type="hidden" class="panel_type" value="LocalContext" /> <div class="header">In this section</div> <ul class="local_context"> <li class="top_level parent"><img src="/i/open.gif" class="toggle _info_docs_tools_vep_" alt=""><a href="/info/docs/tools/vep/"><b>Ensembl Variant Effect Predictor (VEP)</b></a><ul><li><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/online/" title="VEP web interface">VEP web interface</a></li><li><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/script/" title="VEP command line">VEP command line</a></li><li><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/vep_formats.html" title="Data formats">Data formats</a></li><li><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/recoder/" title="Variant Recoder">Variant Recoder</a></li><li><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/haplo/" title="Haplosaurus">Haplosaurus</a></li><li class="last"><img src="/i/leaf.gif"><a href="/info/docs/tools/vep/vep_faq.html" title="VEP FAQ">VEP FAQ</a></li></ul></li><li class="top_level"><img src="/i/leaf.gif" class="toggle _info_docs_tools_simulator_" alt=""><a href="/info/docs/tools/simulator/"><b>Variant Simulator</b></a></li><li class="last"><img src="/i/leaf.gif" class="toggle _info_docs_tools_vcftoped_" alt=""><a href="/info/docs/tools/vcftoped/"><b>VCF to PED Converter</b></a></li> </ul> <div class="js_panel" style="margin:16px 0 0 8px"> <input type="hidden" class="panel_type" value="SearchBox" /> <form method="get" class="clear search-form" action="/Multi/Psychic"><fieldset><input value="ensembl" type="hidden" name="site" /><input type="hidden" value="Documentation" name="facet_feature_type" /><div class="ff-multi form-field"><div class="ff-inline ff-right"><input size="20" name="q" value="Search documentation&#8230;" type="text" class="ftext input query optional _string inactive" id="q" /><input value="Go" type="submit" class="fbutton" id="KXpEoB5Z_1" /></div></div></fieldset></form> </div> <p class="invisible">.</p> </div> </div> <div id="main"> <ul class="breadcrumbs print_hide"><li><a class="home" href="//useast.ensembl.org">Home</a></li><li><a href="/info/">Help &amp; Documentation</a></li><li><a href="/info/docs/" title="API & Software">API & Software</a></li><li class="last"><a href="/info/docs/tools/" title="Ensembl Tools">Ensembl Tools</a></li></ul> <div id="content"><div id="static"> <h1>Ensembl Tools</h1> <p>We provide a number of ready-made tools for processing both our data and yours. We routinely delete results from our servers after 10 days, but if you have an <a href="/Help/View?id=473" class="modal_link">ensembl account</a> you will be able to save the results indefinitely. <h2>Processing your data</h2> <table class="ss autocenter" style="width: 100%" cellpadding="4" cellspacing="0"> <thead><tr class="ss_header"><th title="Name" style="width:20%;text-align:left">Name</th><th title="Description" style="text-align:left;width:40%">Description</th><th title="Online tool" style="width:10%;text-align:center">Online tool</th><th title="Upload limit" style="text-align:center;width:10%">Upload limit</th><th title="Download script" style="width:10%;text-align:center">Download script</th><th title="Documentation" style="width:10%;text-align:center">Documentation</th></tr></thead> <tbody><tr class="bg1"><td style="width:20%;text-align:left"><a href="/Homo_sapiens/Tools/VEP" class="nodeco"><b>Variant Effect Predictor</b><br /><img src="/i/vep_logo_sm.png" alt="[logo]" /></a></td><td style="width:40%;text-align:left">Analyse your own variants and predict the functional consequences of known and unknown variants via our Variant Effect Predictor (VEP) tool.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/VEP" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%">50MB*</td><td style="text-align:center;width:10%"><a href="https://github.com/Ensembl/ensembl-tools/archive/release/113.zip" rel="external" class="nodeco"><img src="/i/16/download.png" alt="Download" title="Download Perl script" /></a></td><td style="text-align:center;width:10%"><a href="/info/docs/tools/vep/index.html"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="text-align:left;width:20%"><b><a class="nodeco" href="/Homo_sapiens/Tools/VR">Variant Recoder</a></b></td><td style="width:40%;text-align:left">Translate a variant identifier, HGVS notation or genomic SPDI notation to all possible variant IDs, HGVS, VCF format and genomic SPDI.</td><td style="text-align:center;width:10%"><a href="/Homo_sapiens/Tools/VR" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="width:10%;text-align:center">Maximun 1000 variants recommended</td><td style="text-align:center;width:10%"><a href="https://github.com/Ensembl/ensembl-vep/tree/release/113/variant_recoder" rel="external" class="nodeco"><img src="/i/16/download.png" alt="Download" title="Download Perl script" /></a></td><td style="text-align:center;width:10%"><a href="/info/docs/tools/vep/recoder/index.html"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg1"><td style="width:20%;text-align:left"><b><a class="nodeco" href="/Homo_sapiens/Tools/Blast">BLAST/BLAT</a></b></td><td style="text-align:left;width:40%">Search our genomes for your DNA or protein sequence.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/Blast" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%">50MB</td><td style="text-align:center;width:10%"></td><td style="text-align:center;width:10%"><a href="/Help/View?db=core;id=451" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="width:20%;text-align:left"><b><a class="nodeco" href="/Homo_sapiens/Tools/FileChameleon">File Chameleon</a></b></td><td style="width:40%;text-align:left">Convert Ensembl files for use with other analysis tools</td><td style="text-align:center;width:10%"><a href="/Homo_sapiens/Tools/FileChameleon" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="width:10%;text-align:center"></td><td style="text-align:center;width:10%"><a href="https://github.com/FAANG/faang-format-transcriber" rel="external" class="nodeco"><img src="/i/16/download.png" alt="Download" title="Download Perl script" /></a></td><td style="text-align:center;width:10%"><a href="/Help/View?db=core;id=572" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg1"><td style="width:20%;text-align:left"><b><a class="nodeco" href="/Homo_sapiens/Tools/AssemblyConverter">Assembly Converter</a></b></td><td style="width:40%;text-align:left">Map (liftover) your data's coordinates to the current assembly.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/AssemblyConverter" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%">50MB</td><td style="text-align:center;width:10%"></td><td style="width:10%;text-align:center"><a href="/Help/View?db=core;id=559" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="width:20%;text-align:left"><b><a class="nodeco" href="/Homo_sapiens/Tools/IDMapper">ID History Converter</a></b></td><td style="width:40%;text-align:left">Convert a set of Ensembl IDs from a previous release into their current equivalents.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/IDMapper" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="width:10%;text-align:center">50MB</td><td style="width:10%;text-align:center"><a href="https://github.com/Ensembl/ensembl-tools/tree/release/113/scripts/id_history_converter" rel="external" class="nodeco"><img src="/i/16/download.png" alt="Download" title="Download Perl script" /></a></td><td style="width:10%;text-align:center"><a href="/Help/View?db=core;id=560" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg1"><td style="text-align:left;width:20%"><b><a class="nodeco" href="/Homo_sapiens/Tools/LD">Linkage Disequilibrium Calculator</a></b></td><td style="text-align:left;width:40%">Calculate LD between variants using genotypes from a selected population.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/LD" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%"></td><td style="text-align:center;width:10%"></td><td style="width:10%;text-align:center"><a href="/Help/View?db=core;id=587" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="text-align:left;width:20%"><b><a class="nodeco" href="/Homo_sapiens/Tools/VcftoPed">VCF to PED converter</a></b></td><td style="width:40%;text-align:left">Parse a vcf file to create a linkage pedigree file (ped) and a marker information file, which together may be loaded into ld visualization tools like Haploview.</td><td style="width:10%;text-align:center"><a href="/Homo_sapiens/Tools/VcftoPed" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%"></td><td style="width:10%;text-align:center"><a href="http://http.1000genomes.ebi.ac.uk/vol1/ftp/technical/browser/vcf_to_ped_converter/version_1.1/vcf_to_ped_convert.pl" rel="external" class="nodeco"><img src="/i/16/download.png" alt="Download" title="Download Perl script" /></a></td><td style="width:10%;text-align:center"><a href="/info/docs/tools/vcftoped/index.html"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg1"><td style="text-align:left;width:20%"><b><a class="nodeco" href="/Homo_sapiens/Tools/DataSlicer">Data Slicer</a></b></td><td style="text-align:left;width:40%">Get a subset of data from a BAM or VCF file.</td><td style="text-align:center;width:10%"><a href="/Homo_sapiens/Tools/DataSlicer" class="nodeco"><img src="/i/16/tool.png" alt="Tool" title="Go to online tool" /></a></td><td style="text-align:center;width:10%"></td><td style="text-align:center;width:10%"></td><td style="width:10%;text-align:center"><a href="/Help/View?db=core;id=575" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr></tbody> </table> * For larger datasets we provide an API script that can be downloaded (you will also need to install our Perl API, below, to run the script).<h2 class="top-margin">Accessing Ensembl data</h2> <table class="ss autocenter" style="width: 100%" cellpadding="4" cellspacing="0"> <thead><tr class="ss_header"><th title="Name" style="width:20%;text-align:left">Name</th><th title="Description" style="text-align:left;width:30%">Description</th><th title="Get it from:" style="text-align:center;width:30%">Get it from:</th><th title="Documentation" style="text-align:center;width:10%">Documentation</th></tr></thead> <tbody><tr class="bg1"><td style="text-align:left;width:20%"><b><a href="/biomart/martview">BioMart</a></b></td><td style="text-align:left;width:30%">Use this data-mining tool to export custom datasets from Ensembl.</td><td style="width:30%;text-align:center"><a href="/biomart/martview">Ensembl Biomart</a></td><td style="text-align:center;width:10%"><a href="/info/data/biomart/index.html" class="popup"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="text-align:left;width:20%"><b>Ensembl Perl API</b></td><td style="width:30%;text-align:left">Programmatic access to all Ensembl data using simple Perl scripts</td><td style="width:30%;text-align:center"><a href="https://github.com/Ensembl">GitHub</a> or <a href="https://ftp.ensembl.org/pub/ensembl-api.tar.gz" rel="external">FTP download</a> (current release only)</td><td style="width:10%;text-align:center"><a href="/info/docs/api/"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg1"><td style="width:20%;text-align:left"><b>Ensembl Virtual Machine</b></td><td style="text-align:left;width:30%">VirtualBox virtual Machine with Ubuntu desktop and pre-configured with the latest Ensembl API plus Variant Effect Predictor (VEP). <b>NB: download is >1 GB</b></td><td style="text-align:center;width:30%"><a href="https://ftp.ensembl.org/pub/current_virtual_machine" rel="external">FTP download</a></td><td style="width:10%;text-align:center"><a href="/info/data/virtual_machine.html"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr><tr class="bg2"><td style="width:20%;text-align:left"><b><a href=https://rest.ensembl.org>Ensembl REST server</a></b></td><td style="text-align:left;width:30%">Access Ensembl data using your favourite programming language</td><td style="text-align:center;width:30%"><a href="https://rest.ensembl.org">rest.ensembl.org</a></td><td style="width:10%;text-align:center"><a href="https://github.com/Ensembl/ensembl-rest/wiki"><img src="/i/16/info.png" alt="Documentation" /></a></td></tr></tbody> </table> </div></div> </div> <div id="footer"> <div class="column-wrapper"> <div class="column-two left"> <p>Ensembl release 113 - October 2024 &copy; <span class="print_hide"><a 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value=Lates_calcarifer|Lynx_canadensis|Apteryx_haastii|Sus_scrofa_bama_miniature|Sus_scrofa_rongchang|Taeniopygia_guttata|Oreochromis_niloticus|Eptatretus_burgeri|Canis_lupus_familiarisboxer|Acanthochromis_polyacanthus|Strigops_habroptila|Leptobrachium_leishanense|Oryzias_latipes|Corvus_moneduloides|Macaca_nemestrina|Theropithecus_gelada|Oryzias_javanicus|Capra_hircus|Rhinopithecus_roxellana|Sus_scrofa_nihs_2020|Mus_caroli|Rattus_norvegicus_SHRUtx|Accipiter_nisus|Ovis_aries_kermani|Mus_spretus|Ursus_thibetanus_thibetanus|Anolis_carolinensis|Junco_hyemalis|Rhinopithecus_bieti|Nothoprocta_perdicaria|Pan_paniscus|Echinops_telfairi|Tetraodon_nigroviridis|Sus_scrofa_berkshire|Cervus_hanglu_yarkandensis|Sus_scrofa_meishan|Ovis_aries_white_dorper|Propithecus_coquereli|Sus_scrofa_hampshire|Sorex_araneus|Microcebus_murinus|Cyprinodon_variegatus|Mus_musculus_NZO_HlLtJ|Panthera_leo|Homo_sapiens|Ovis_aries_rambouillet|Sus_scrofa_pietrain|Stegastes_partitus|Seriola_lalandi_dorsalis|Bos_mutus|Poecilia_reticulata|Sus_scrofa_ossabaw_miniature|Nothobranchius_furzeri|Mus_musculus_C3H_HeJ|Ursus_americanus|Panthera_tigris_altaica|Danio_rerio|Scleropages_formosus|Takifugu_rubripes|Strix_occidentalis_caurina|Choloepus_hoffmanni|Sus_scrofa_ningxiang|Sinocyclocheilus_grahami|Cavia_aperea|Gallus_gallus_GCA_016700215.2|Vombatus_ursinus|Pavo_cristatus|Sus_scrofa_pb115|Catagonus_wagneri|Salmo_salar|Loxodonta_africana|Electrophorus_electricus|Salmo_trutta|Crocodylus_porosus|Sus_scrofa_usmarc|Cricetulus_griseus_picr|Sciurus_vulgaris|Gallus_gallus_GCA_000002315.5|Gadus_morhua_celtic_sea|Gallus_gallus|Oryzias_latipes_hni|Astyanax_mexicanus|Gasterosteus_aculeatus_freshwater_bot|Saimiri_boliviensis_boliviensis|Capra_hircus_saanen_dairy|Anas_zonorhyncha|Podarcis_muralis|Cyclopterus_lumpus|Mus_musculus_C57BL_6NJ|Ailuropoda_melanoleuca|Oncorhynchus_mykiss|Amphiprion_percula|Callorhinchus_milii|Gasterosteus_aculeatus|Gambusia_affinis|Chinchilla_lanigera|Ciona_savignyi|Hucho_hucho|Anas_platyrhynchos_platyrhynchos|Pseudonaja_textilis|Vulpes_vulpes|Betta_splendens|Malurus_cyaneus_samueli|Labrus_bergylta|Numida_meleagris|Camarhynchus_parvulus|Erinaceus_europaeus|Mandrillus_leucophaeus|Petromyzon_marinus|Catharus_ustulatus|Oncorhynchus_tshawytscha|Neovison_vison|Otus_sunia|Pelusios_castaneus|Sus_scrofa_tibetan|Cyprinus_carpio_hebao_red|Capra_hircus_xinong_saanen_dairy|Astyanax_mexicanus_pachon|Amphiprion_ocellaris|Zonotrichia_albicollis|Athene_cunicularia|Cricetulus_griseus_chok1gshd|Vicugna_pacos|Phocoena_sinus|Canis_lupus_familiaris|Mus_musculus_PWK_PhJ|Rattus_norvegicus_SHRSPBbbUtx|Erpetoichthys_calabaricus|Latimeria_chalumnae|Calidris_pygmaea|Ovis_aries_texel|Mus_spicilegus|Gopherus_agassizii|Xiphophorus_maculatus|Denticeps_clupeoides|Felis_catus|Naja_naja|Mustela_putorius_furo|Canis_lupus_familiarisgreatdane|Cavia_porcellus|Pelodiscus_sinensis|Bos_grunniens|Equus_caballus|Struthio_camelus_australis|Parus_major|Neogobius_melanostomus|Gorilla_gorilla|Oryzias_melastigma|Lepisosteus_oculatus|Tupaia_belangeri|Varanus_komodoensis|Piliocolobus_tephrosceles|Spermophilus_dauricus|Sus_scrofa_euw1|Macaca_fascicularis|Sphaeramia_orbicularis|Meleagris_gallopavo|Delphinapterus_leucas|Papio_anubis|Coturnix_japonica|Esox_lucius|Poecilia_latipinna|Chlorocebus_sabaeus|Drosophila_melanogaster|Meriones_unguiculatus|Nomascus_leucogenys|Amazona_collaria|Gadus_morhua|Oryctolagus_cuniculus|Gouania_willdenowi|Poecilia_mexicana|Oreochromis_aureus|Mus_musculus_CAST_EiJ|Otolemur_garnettii|Serinus_canaria|Buteo_japonicus|Mus_musculus_A_J|Laticauda_laticaudata|Sus_scrofa_meishan_GCA_017957985.1|Melopsittacus_undulatus|Pongo_abelii|Calidris_pugnax|Oryzias_latipes_hsok|Nannospalax_galili|Parambassis_ranga|Scophthalmus_maximus|Dicentrarchus_labrax|Myripristis_murdjan|Capra_hircus_blackbengal|Gasterosteus_aculeatus_marine_syl|Dipodomys_ordii|Notamacropus_eugenii|Aotus_nancymaae|Carassius_auratus|Ficedula_albicollis|Monopterus_albus|Hippocampus_comes|Sus_scrofa_duroc|Mus_musculus_DBA_2J|Heterocephalus_glaber_male|Cyprinus_carpio_carpio|Anser_cygnoides|Castor_canadensis|Ursus_maritimus|Moschus_moschiferus|Falco_tinnunculus|Dasypus_novemcinctus|Clupea_harengus|Physeter_catodon|Terrapene_carolina_triunguis|Apteryx_owenii|Cyprinus_carpio_german_mirror|Anabas_testudineus|Monodon_monoceros|Oncorhynchus_kisutch|Myotis_lucifugus|Camelus_dromedarius|Ovis_aries_chinese_merino|Oryzias_sinensis|Monodelphis_domestica|Sander_lucioperca|Mus_musculus_BALB_cJ|Echeneis_naucrates|Octodon_degus|Ovis_aries_east_friesian|Sinocyclocheilus_anshuiensis|Cynoglossus_semilaevis|Chrysemys_picta_bellii|Xiphophorus_couchianus|Astatotilapia_calliptera|Cyprinus_carpio_huanghe|Ciona_intestinalis|Chelonoidis_abingdonii|Canis_lupus_dingo|Microtus_ochrogaster|Gasterosteus_aculeatus_marine_bam|Heterocephalus_glaber_female|Mola_mola|Sinocyclocheilus_rhinocerous|Marmota_marmota_marmota|Cairina_moschata_domestica|Ictalurus_punctatus|Chrysolophus_pictus|Poecilia_formosa|Fundulus_heteroclitus|Stachyris_ruficeps|Sarcophilus_harrisii|Sus_scrofa_wuzhishan|Panthera_pardus|Salmo_salar_north_american_atlantic_salmon|Apteryx_rowi|Paramormyrops_kingsleyae|Rattus_norvegicus|Saccharomyces_cerevisiae|Ovis_aries_polled_dorset|Colobus_angolensis_palliatus|Mus_musculus_LP_J|Mesocricetus_auratus|Mus_musculus_AKR_J|Suricata_suricatta|Larimichthys_crocea|Mastacembelus_armatus|Equus_asinus|Salmo_salar_european_origin_alta|Canis_lupus_familiarisbasenji|Tursiops_truncatus|Cricetulus_griseus_crigri|Zosterops_lateralis_melanops|Bos_taurus|Phasianus_colchicus|Pan_troglodytes|Mus_musculus_NOD_ShiLtJ|Sparus_aurata|Canis_lupus_familiarisgermanshepherd|Cebus_imitator|Salmo_salar_north_american_origin_brian|Carlito_syrichta|Pogona_vitticeps|Haplochromis_burtoni|Ovis_aries_qiaoke|Salvator_merianae|Cottoperca_gobio|Bos_indicus_hybrid|Peromyscus_maniculatus_bairdii|Pundamilia_nyererei|Lepidothrix_coronata|Ictidomys_tridecemlineatus|Ochotona_princeps|Neolamprologus_brichardi|Seriola_dumerili|Ornithorhynchus_anatinus|Pygocentrus_nattereri|Procavia_capensis|Periophthalmus_magnuspinnatus|Gopherus_evgoodei|Phascolarctos_cinereus|Pteropus_vampyrus|Erythrura_gouldiae|Zalophus_californianus|Salarias_fasciatus|Cercocebus_atys|Fukomys_damarensis|Sus_scrofa_bamei|Ovis_aries_hu|Anser_brachyrhynchus|Sus_scrofa_landrace|Chelydra_serpentina|Bubo_bubo|Bos_taurus_hybrid|Balaenoptera_musculus|Jaculus_jaculus|Mus_pahari|Maylandia_zebra|Geospiza_fortis|Callithrix_jacchus|Aquila_chrysaetos_chrysaetos|Kryptolebias_marmoratus|Lonchura_striata_domestica|Caenorhabditis_elegans|Mus_musculus|Mus_musculus_WSB_EiJ|Sphenodon_punctatus|Mus_musculus_CBA_J|Prolemur_simus|Sus_scrofa_jinhua|Xenopus_tropicalis|Urocitellus_parryii|Bison_bison_bison|Cyanistes_caeruleus|Macaca_mulatta|Ovis_aries_romanov|Dromaius_novaehollandiae|Notechis_scutatus|Rattus_norvegicus_WKYBbb|Sus_scrofa|Anas_platyrhynchos|Sus_scrofa_largewhite|Rhinolophus_ferrumequinum|Mus_musculus_FVB_NJ|Manacus_vitellinus|Amphilophus_citrinellus|Mus_musculus_129S1_SvImJ> 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