Ensembl Metazoa

<!DOCTYPE html> <html lang="en-gb"> <head> <title>Ensembl Metazoa</title> <link rel="stylesheet" type="text/css" media="all" href="/minified/1627d0642fc0489f4d5171e89c120c90.css"/><link rel="stylesheet" type="text/css" media="all" href="/minified/1e7dbc57580167c82fbefd42000cbfd3.image.css"/> <link rel="icon" type="image/png" href="/i/ensembl-favicon.png" /> <link type="image/png" rel="apple-touch-icon" href="/apple-touch-icon.png" /> <link href="//metazoa.ensembl.org/opensearch/all.xml" type="application/opensearchdescription+xml" rel="search" title="Ensembl (All)" /> <meta name="description" content="Ensembl Metazoa is a genome-centric portal for metazoan species of scientific interest" /> <meta name="viewport" content="target-densitydpi=device-dpi, width=device-width, initial-scale=1.0, maximum-scale=2.0, user-scalable=yes" /> <script>var prefetch = [];</script> </head> <body id="ensembl-webpage" class="ie ie7 ie67 no_tabs static" data-pace="2"> <div id="min_width_container"> <div 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Data","description":"Cross-genome resources and analyses at both the sequence level and the gene level","keywords":"phylogenetics, evolution, homology, synteny","includedInDataCatalog":"http://.ensembl.org/#project","url":"/info/genome/compara","distribution":[{"@type":"DataDownload","contentURL":"http://ftp.ensemblgenomes.org/pub/metazoa/pan_ensembl/current/emf/ensembl-compara/homologies/","fileFormat":"emf","description":"Alignments of resequencing data across the full taxonomic tree","name":"Pan Comparative Genomics - EMF files"},{"name":"Ensembl Metazoa Comparative Genomics - EMF files","fileFormat":"emf","description":"Alignments of resequencing data for Ensembl species","@type":"DataDownload","contentURL":"http://ftp.ensemblgenomes.org/pub/metazoa//current/emf/ensembl-compara/homologies/"}],"@type":"Dataset"},"keywords":"genomics, bioinformatics, vertebrate, EBI, genetic, research, gene, regulation, variation, tool, download","@context":"http://schema.org","provider":{"name":"Ensembl","@type":"Organization","email":"helpdesk@ensembl.org"},"@id":"http://.ensembl.org/#project","sourceOrganization":{"@type":"Organization","url":"https://www.ebi.ac.uk","name":"European Bioinformatics Institute"},"url":"http://metazoa.ensembl.org","@type":"DataCatalog"} </script> <div id="SpeciesSearch" class="js_panel"><input type="hidden" class="panel_type" value="SearchBox" /><form class="clear homepage-search-form search-form" method="get" action="/Multi/Psychic"><fieldset><input value="ensemblunit" type="hidden" name="site" /><div class="form-field ff-multi"><label for="species" class="ff-label">Search:</label><div class="ff-right ff-inline"><span class="inp-group"><select id="species" class="input fselect" name="species"><option value="">All species</option><option value="" disabled="disabled">---</option><optgroup label="Favourite species"><option value="Caenorhabditis_elegans">Caenorhabditis elegans (Nematode, N2)</option><option value="Anopheles_gambiae">Anopheles gambiae (African malaria mosquito, PEST)</option><option value="Drosophila_melanogaster">Drosophila melanogaster (Fruit fly)</option><option value="Apis_mellifera">Apis mellifera (Honey bee, DH4)</option></optgroup><option value="" disabled="disabled">---</option><option value="Acanthaster_planci_gca001949145v1">Acanthaster planci (Crown-of-thorns starfish)</option><option value="Acromyrmex_echinatior_gca000204515v1rs">Acromyrmex echinatior (Panamanian leaf-cutter ant)</option><option value="Acropora_millepora_gca013753865v1">Acropora millepora (Stony coral, JS-1)</option><option value="Actinia_equina_GCA_011057435.1">Actinia equina (Beadlet anemone, AE1)</option><option value="Actinia_tenebrosa_gca009602425v1">Actinia tenebrosa (Australian red waratah sea anemone)</option><option value="Acyrthosiphon_pisum_gca005508785v2rs">Acyrthosiphon pisum (Pea aphid, AL4f)</option><option value="Adelges_cooleyi_gca023614345v1rs">Adelges cooleyi (Spruce gall adelgid, 19-005CV)</option><option value="Adineta_vaga">Adineta vaga (Rotifer)</option><option value="Aedes_aegypti_lvpagwg">Aedes aegypti (Yellow fever mosquito, LVP_AGWG)</option><option value="Aedes_albopictus">Aedes albopictus (Asian tiger mosquito, Foshan)</option><option value="Aethina_tumida_gca024364675v1rs">Aethina tumida (Small hive beetle, Nest 87)</option><option value="Agrilus_planipennis_gca000699045v2">Agrilus planipennis (Emerald ash borer, EAB-ADULT)</option><option value="Amblyteles_armatorius_gca933228735v1">Amblyteles armatorius (Ichneumon Wasp, reference)</option><option value="Amphibalanus_amphitrite_gca019059575v1">Amphibalanus amphitrite (Acorn barnacle, SeventyFive)</option><option value="Amphimedon_queenslandica_gca000090795v2rs">Amphimedon queenslandica (Demosponge)</option><option value="Amyelois_transitella_gca001186105v1rs">Amyelois transitella (Naval orange worm, UIUC subculture of SPIRL-1966)</option><option value="Anastrepha_ludens_gca028408465v1rs">Anastrepha ludens (Mexican fruit fly, Willacy)</option><option value="Anastrepha_obliqua_gca027943255v1rs">Anastrepha obliqua (WestIndian fruit fly, idAnaObli1)</option><option value="Ancistrocerus_nigricornis_gca916049575v1">Ancistrocerus nigricornis (Potter wasp, reference)</option><option value="Anneissia_japonica_gca011630105v1">Anneissia japonica (Sea lily, Jap-2015-1)</option><option value="Anopheles_albimanus">Anopheles albimanus (Mosquito, STECLA)</option><option value="Anopheles_arabiensis">Anopheles arabiensis (Mosquito, Dongola)</option><option value="Anopheles_atroparvus_GCA_914969975.1">Anopheles atroparvus (Mosquito, Infravec2 EBRE)</option><option value="Anopheles_christyi">Anopheles christyi (Mosquito, ACHKN1017)</option><option value="Anopheles_coluzzii">Anopheles coluzzii (Mosquito, Mali-NIH)</option><option value="Anopheles_coluzzii_ngousso">Anopheles coluzzii (Mosquito, Ngousso)</option><option value="Anopheles_coluzzii_gca943734685v1rs">Anopheles coluzzii (Mosquitos)</option><option value="Anopheles_culicifacies">Anopheles culicifacies (Mosquito, A-37)</option><option value="Anopheles_darlingi">Anopheles darlingi (American malaria mosquito, Coari)</option><option value="Anopheles_dirus">Anopheles dirus (Mosquito, WRAIR2)</option><option value="Anopheles_epiroticus">Anopheles epiroticus (Mosquito, Epiroticus2)</option><option value="Anopheles_farauti">Anopheles farauti (Mosquito, FAR1)</option><option value="Anopheles_funestus_gca943734845v1rs">Anopheles funestus (African malaria mosquito)</option><option value="Anopheles_funestus">Anopheles funestus (African malaria mosquito, FUMOZ)</option><option value="Anopheles_gambiae">Anopheles gambiae (African malaria mosquito, PEST)</option><option value="Anopheles_maculatus">Anopheles maculatus (Mosquito, maculatus3)</option><option value="Anopheles_melas">Anopheles melas (Mosquito, CM1001059_A)</option><option value="Anopheles_merus">Anopheles merus (Mosquito, MAF)</option><option value="Anopheles_minimus">Anopheles minimus (Mosquito, MINIMUS1)</option><option value="Anopheles_quadriannulatus">Anopheles quadriannulatus (Mosquito, SANGWE)</option><option value="Anopheles_sinensis_china">Anopheles sinensis (Mosquito, China)</option><option value="Anopheles_sinensis">Anopheles sinensis (Mosquito, SINENSIS)</option><option value="Anopheles_stephensi_indian">Anopheles stephensi (Asian malaria mosquito, Indian)</option><option value="Anopheles_stephensi">Anopheles stephensi (Asian malaria mosquito, SDA-500)</option><option value="Anoplophora_glabripennis_gca000390285v2">Anoplophora glabripennis (Asian long-horned beetle, ALB-LARVAE)</option><option value="Anthonomus_grandis_gca022605725v3rs">Anthonomus grandis grandis (Boll weevil)</option><option value="Aphidius_gifuensis_gca014905175v1">Aphidius gifuensis (Parasitoid wasp, YNYX2018)</option><option value="Apis_dorsata_gca000469605v1rs">Apis dorsata (Giant honeybee)</option><option value="Apis_florea_gca000184785v2rs">Apis florea (Dwarf honeybee)</option><option value="Apis_mellifera">Apis mellifera (Honey bee, DH4)</option><option value="Aplysia_californica_gca000002075v2">Aplysia californica (California sea hare, F4 #8)</option><option value="Ascaris_suum_prjna62057">Ascaris suum (Pig roundworm, AG01)</option><option value="Asterias_rubens_GCA_902459465.3">Asterias rubens (European starfish)</option><option value="Athalia_rosae_gca917208135v1">Athalia rosae (Coleseed sawfly, reference)</option><option value="Atta_cephalotes">Atta cephalotes (Leaf-cutter ant)</option><option value="Bactrocera_dorsalis_gca000789215v2">Bactrocera dorsalis (Oriental fruit fly, Punador)</option><option value="Bactrocera_latifrons_gca001853355v1">Bactrocera latifrons (Solanum fruit fly, USDA-ARS-PBARC rearing strain)</option><option value="Bactrocera_neohumeralis_gca024586455v2rs">Bactrocera neohumeralis (Lesser Queensland fruit fly, Rockhampton)</option><option value="Bactrocera_tryoni_gca016617805v2">Bactrocera tryoni (Queensland fruitfly, S06)</option><option value="Belgica_antarctica">Belgica antarctica (Antarctic midge)</option><option value="Bemisia_tabaci_asiaii5">Bemisia tabaci (Silverleaf whitefly, Asia II-5)</option><option value="Bemisia_tabaci_ssa1nig">Bemisia tabaci (Silverleaf whitefly, SSA1-SG1 Ng)</option><option value="Bemisia_tabaci_ssa1ug">Bemisia tabaci (Silverleaf whitefly, SSA1-SG1 Ug)</option><option value="Bemisia_tabaci_ssa2nig">Bemisia tabaci (Silverleaf whitefly, SSA2 Ng)</option><option value="Bemisia_tabaci_ssa3nig">Bemisia tabaci (Silverleaf whitefly, SSA3 Ng)</option><option value="Bemisia_tabaci_uganda1">Bemisia tabaci (Silverleaf whitefly, Uganda-1)</option><option value="Bicyclus_anynana_gca900239965v1rs">Bicyclus anynana (Squinting bush brown)</option><option value="Biomphalaria_glabrata">Biomphalaria glabrata (Bloodfluke planorb, BB02)</option><option value="Bombus_affinis_gca024516045v2rs">Bombus affinis (Rusty patched bumble bee, iyBomAffi1)</option><option value="Bombus_huntii_gca024542735v1rs">Bombus huntii (Hunt's bumblebee, Logan2020A)</option><option value="Bombus_impatiens_gca000188095v4">Bombus impatiens (Common eastern bumblebee)</option><option value="Bombus_terrestris">Bombus terrestris (Buff-tailed bumblebee)</option><option value="Bombus_terrestris_gca910591885v2">Bombus terrestris (buff-tailed bumblebee, reference)</option><option value="Bombus_vancouverensis_gca011952275v1rs">Bombus vancouverensis nearcticus (Montane Bumble Bee, JDL1245)</option><option value="Bombyx_mandarina_gca003987935v1rs">Bombyx mandarina (Wild silkworm, Bman2017)</option><option value="Bombyx_mori_gca014905235v2">Bombyx mori (Domestic silkworm, p50T)</option><option value="Branchiostoma_lanceolatum">Branchiostoma lanceolatum (Amphioxus)</option><option value="Brugia_malayi_prjna10729">Brugia malayi (Nematode, FR3)</option><option value="Caenorhabditis_brenneri_prjna20035">Caenorhabditis brenneri (Nematode)</option><option value="Caenorhabditis_briggsae_prjna10731">Caenorhabditis briggsae (Nematode)</option><option value="Caenorhabditis_elegans">Caenorhabditis elegans (Nematode, N2)</option><option value="Caenorhabditis_japonica_prjna12591">Caenorhabditis japonica (Nematode)</option><option value="Caenorhabditis_remanei_prjna53967">Caenorhabditis remanei (Nematode)</option><option value="Camponotus_floridanus_gca003227725v1rs">Camponotus floridanus (Florida carpenter ant, SB8)</option><option value="Capitella_teleta">Capitella teleta (Bristle worm)</option><option value="Cataglyphis_hispanica_gca021464435v1rs">Cataglyphis hispanica (Desert ant, Lineage 1)</option><option value="Centruroides_sculpturatus_gca000671375v2">Centruroides sculpturatus (Bark scorpion, CEXI.00-Female)</option><option value="Ceratitis_capitata_gca000347755v4">Ceratitis capitata (Mediterranean fruit fly)</option><option value="Chelonus_insularis_gca013357705v1rs">Chelonus insularis (Parasitoid wasp, UGA/USDA-ARS -01)</option><option value="Cherax_quadricarinatus_gca026875155v2rs">Cherax quadricarinatus (Australian red claw crayfish, HC-2022)</option><option value="Cimex_lectularius">Cimex lectularius (Bed bug, Harlan)</option><option value="Clytia_hemisphaerica_gca902728285">Clytia hemisphaerica (Jellyfish, Z4C2)</option><option value="Copidosoma_floridanum_gca000648655v2">Copidosoma floridanum (Parasitoid wasp, CFLO.00-Male)</option><option value="Coremacera_marginata_gca914767935v1">Coremacera marginata (Sieve-winged Snailkiller, reference)</option><option value="Cotesia_glomerata_gca020080835v1">Cotesia glomerata (White butterfly parasite wasp, CgM1)</option><option value="Crassostrea_angulata_gca025612915v2rs">Crassostrea angulata (Portuguese oyster, pt1a10)</option><option value="Crassostrea_gigas">Crassostrea gigas (Pacific oyster)</option><option value="Crassostrea_virginica_gca002022765v4">Crassostrea virginica (Eastern oyster, RU13XGHG1-28)</option><option value="Cryptotermes_secundus_gca002891405v2rs">Cryptotermes secundus (Drywood termite)</option><option value="Ctenocephalides_felis_gca003426905v1rs">Ctenocephalides felis (Cat flea, EL2017-DRISC)</option><option value="Culex_pipiens_gca016801865v2rs">Culex pipiens pallens (Northern house mosquito, TS)</option><option value="Culex_quinquefasciatus_gca015732765v1vb">Culex quinquefasciatus (Southern house mosquito, JHB)</option><option value="Culex_quinquefasciatus">Culex quinquefasciatus (Southern house mosquito, Johannesburg)</option><option value="Culicoides_sonorensis">Culicoides sonorensis (Biting Midge)</option><option value="Cylas_formicarius_gca029955315v1rs">Cylas formicarius (Sweet potato weevil, icCylForm1)</option><option value="Daktulosphaira_vitifoliae_gca025091365v1rs">Daktulosphaira vitifoliae (Grape phylloxera, Bord-2020)</option><option value="Danaus_plexippus_gca009731565v1">Danaus plexippus plexippus (Monarch butterfly, F-2)</option><option value="Daphnia_carinata_gca022539665v3rs">Daphnia carinata (Water flea, CSIRO-1)</option><option value="Daphnia_magna_gca020631705v2">Daphnia magna (Fresh water planktonic, NIES)</option><option value="Daphnia_pulex_gca021134715v1rs">Daphnia pulex (Common water flea, KAP4)</option><option value="Daphnia_pulicaria_gca021234035v2rs">Daphnia pulicaria (Water flea, SC F1-1A)</option><option value="Dendroctonus_ponderosae_gca000355655v1">Dendroctonus ponderosae (Mountain pine beetle)</option><option value="Dendronephthya_gigantea_gca004324835v1">Dendronephthya gigantea (Carnation coral, DGI-Jeju-01)</option><option value="Dermacentor_andersoni_gca023375885v2rs">Dermacentor andersoni (Rocky Mountain wood tick, qqDerAnde1)</option><option value="Dermacentor_silvarum_gca013339745v2rs">Dermacentor silvarum (Tick, Dsil-2018)</option><option value="Dermatophagoides_pteronyssinus_gca001901225v2">Dermatophagoides pteronyssinus (European house dust mite, airmid)</option><option value="Diabrotica_virgifera_gca917563875v2rs">Diabrotica virgifera virgifera (Western corn rootworm)</option><option value="Diabrotica_virgifera_gca003013835v2">Diabrotica virgifera virgifera (Western corn rootworm, Ped12-6-A-3)</option><option value="Diaphorina_citri_gca000475195v1rs">Diaphorina citri (Asian citrus psyllid)</option><option value="Dimorphilus_gyrociliatus_gca904063045v1">Dimorphilus gyrociliatus (Segmented worms)</option><option value="Dinothrombium_tinctorium">Dinothrombium tinctorium (Red velvet mite, UoL-WK)</option><option value="Diorhabda_carinulata_gca026250575v1rs">Diorhabda carinulata (Northern tamarisk beetle, Delta)</option><option value="Diorhabda_sublineata_gca026230105v1rs">Diorhabda sublineata (Subtropical tamarisk beetle, icDioSubl1.1)</option><option value="Diuraphis_noxia_gca001186385v1">Diuraphis noxia (Russian wheat aphid, RWA2)</option><option value="Dreissena_polymorpha_gca020536995v1rs">Dreissena polymorpha (Zebra mussel, Duluth1)</option><option value="Drosophila_albomicans_gca009650485v2rs">Drosophila albomicans (Fruit fly, 15112-1751.03)</option><option value="Drosophila_ananassae_gca017639315v2rs">Drosophila ananassae (Fruit fly, 14024-0371.13)</option><option value="Drosophila_ananassae">Drosophila ananassae (Fruit fly, TSC#14024-0371.13)</option><option value="Drosophila_arizonae_gca001654025v1rs">Drosophila arizonae (Fruit fly, ariz_Son04)</option><option value="Drosophila_biarmipes_gca025231255v1rs">Drosophila biarmipes (Fruit fly, raj3)</option><option value="Drosophila_bipectinata_gca000236285v2rs">Drosophila bipectinata (Fruit fly)</option><option value="Drosophila_busckii_gca011750605v1rs">Drosophila busckii (Fruit fly, San Diego stock center stock number 13000-0081.31)</option><option value="Drosophila_elegans_gca000224195v2rs">Drosophila elegans (Fruit fly)</option><option value="Drosophila_erecta_gca003286155v2rs">Drosophila erecta (Fruit fly, 14021-0224.00,06,07)</option><option value="Drosophila_erecta">Drosophila erecta (Fruit fly, TSC#14021-0224.01)</option><option value="Drosophila_eugracilis_gca018153835v1rs">Drosophila eugracilis (Fruit fly, 14026-0451.02)</option><option value="Drosophila_ficusphila_gca018152265v1rs">Drosophila ficusphila (Fruit fly, 14025-0441.05)</option><option value="Drosophila_grimshawi_gca018153295v1rs">Drosophila grimshawi (Fruit fly, 15287-2541.00)</option><option value="Drosophila_grimshawi">Drosophila grimshawi (Fruit fly, TSC#15287-2541.00)</option><option value="Drosophila_guanche_gca900245975v1rs">Drosophila guanche (Fruit fly)</option><option value="Drosophila_gunungcola_gca025200985v1rs">Drosophila gunungcola (Fruit fly, Sukarami)</option><option value="Drosophila_hydei_gca003285905v2rs">Drosophila hydei (Fruit fly, 15085-1641.00,03,60)</option><option value="Drosophila_innubila_gca004354385v1rs">Drosophila innubila (Fruit fly, TH190305)</option><option value="Drosophila_kikkawai_gca018152535v1rs">Drosophila kikkawai (Fruit fly, 14028-0561.14)</option><option value="Drosophila_mauritiana_gca004382145v1rs">Drosophila mauritiana (Fruit fly, mau12)</option><option value="Drosophila_melanogaster">Drosophila melanogaster (Fruit fly)</option><option value="Drosophila_miranda_gca003369915v2rs">Drosophila miranda (Fruit fly, MSH22)</option><option value="Drosophila_mojavensis_gca018153725v1rs">Drosophila mojavensis (Fruit fly, 15081-1352.22)</option><option value="Drosophila_mojavensis">Drosophila mojavensis (Fruit fly, TSC#15081-1352.22)</option><option value="Drosophila_navojoa_gca001654015v2rs">Drosophila navojoa (Fruit fly, navoj_Jal97)</option><option value="Drosophila_obscura_gca018151105v1rs">Drosophila obscura (Fruit fly, BZ-5 IFL)</option><option value="Drosophila_persimilis_gca003286085v2rs">Drosophila persimilis (Fruit fly, 14011-0111.01,24,50)</option><option value="Drosophila_persimilis">Drosophila persimilis (Fruit fly, MSH-3)</option><option value="Drosophila_pseudoobscura_gca009870125v2rs">Drosophila pseudoobscura (Fruit fly, MV2-25)</option><option value="Drosophila_pseudoobscura">Drosophila pseudoobscura pseudoobscura (Fruit fly, MV2-25)</option><option value="Drosophila_rhopaloa_gca018152115v1rs">Drosophila rhopaloa (Fruit fly, 14029-0021.01)</option><option value="Drosophila_santomea_gca016746245v2rs">Drosophila santomea (Fruit fly, STO CAGO 1482)</option><option value="Drosophila_sechellia">Drosophila sechellia (Fruit fly, Rob3c)</option><option value="Drosophila_sechellia_gca004382195v2rs">Drosophila sechellia (Fruit fly, sech25)</option><option value="Drosophila_simulans_gca016746395v2rs">Drosophila simulans (Fruit fly, w501)</option><option value="Drosophila_subobscura_gca008121235v1rs">Drosophila subobscura (Fruit fly, 14011-0131.10)</option><option value="Drosophila_subpulchrella_gca014743375v2rs">Drosophila subpulchrella (Fruit fly, 33 F10 #4)</option><option value="Drosophila_suzukii_gca013340165v1rs">Drosophila suzukii (Fruit fly, WT3_2.0)</option><option value="Drosophila_takahashii_gca018152695v1rs">Drosophila takahashii (Fruit fly, IR98-3 E-12201)</option><option value="Drosophila_teissieri_gca016746235v2rs">Drosophila teissieri (Fruit fly, GT53w)</option><option value="Drosophila_virilis_gca003285735v2rs">Drosophila virilis (Fruit fly, 15010-1051.48,49,85)</option><option value="Drosophila_virilis">Drosophila virilis (Fruit fly, TSC#15010-1051.87)</option><option value="Drosophila_willistoni_gca018902025v2rs">Drosophila willistoni (Fruit fly, 14030-0811.24)</option><option value="Drosophila_willistoni">Drosophila willistoni (Fruit fly, TSC#14030-0811.24)</option><option value="Drosophila_yakuba_gca016746365v2rs">Drosophila yakuba (Fruit fly, Tai18E2)</option><option value="Dufourea_novaeangliae_gca001272555v1rs">Dufourea novaeangliae (Bee, 0120121106)</option><option value="Echinococcus_granulosus_gca000524195v1rs">Echinococcus granulosus (Dog tapeworm)</option><option value="Eriocheir_sinensis_gca024679095v1rs">Eriocheir sinensis (Chinese mitten crab)</option><option value="Eufriesea_mexicana_gca001483705v1rs">Eufriesea mexicana (Bee, 0111107269)</option><option value="Eurytemora_affinis_gca000591075v2">Eurytemora affinis (Calanoid copepod, Atlantic clade)</option><option value="Exaiptasia_diaphana_gca001417965v1">Exaiptasia diaphana (Sea anemone, CC7)</option><option value="Folsomia_candida">Folsomia candida (Springtail, str. VU population)</option><option value="Galendromus_occidentalis_gca000255335v2rs">Galendromus occidentalis (Western predatory mite)</option><option value="Galleria_mellonella_gca003640425v2rs">Galleria mellonella (Greater wax moth, Carbio01_MB)</option><option value="Gigantopelta_aegis_gca016097555v1">Gigantopelta aegis (Deep sea snail, Gae_Host)</option><option value="Glossina_austeni">Glossina austeni (Tsetse fly, TTRI)</option><option value="Glossina_brevipalpis">Glossina brevipalpis (Tsetse fly, IAEA)</option><option value="Glossina_fuscipes_gca014805625v1">Glossina fuscipes (Tsetse fly, IAEA_lab_2018)</option><option value="Glossina_morsitans">Glossina morsitans morsitans (Tsetse fly, Yale)</option><option value="Glossina_pallidipes">Glossina pallidipes (Tsetse fly, IAEA)</option><option value="Glossina_palpalis">Glossina palpalis gambiensis (Tsetse fly, IAEA)</option><option value="Glyphotaelius_pellucidus_gca936435175v1">Glyphotaelius pellucidus (Caddisflies, reference)</option><option value="Habropoda_laboriosa_gca001263275v1rs">Habropoda laboriosa (Southeastern blueberry bee, 0110345459)</option><option value="Haemaphysalis_longicornis_gca013339765v1">Haemaphysalis longicornis (Longhorned tick, HaeL-2018)</option><option value="Haliotis_rubra_gca003918875v1rs">Haliotis rubra (Blacklip abalone, DU_JTF1)</option><option value="Haliotis_rufescens_gca023055435v1rs">Haliotis rufescens (Red abalone, VD_foot)</option><option value="Halyomorpha_halys_gca000696795v2rs">Halyomorpha halys (Brown marmorated stink bug, HHAL.00)</option><option value="Harpegnathos_saltator_gca003227715v2rs">Harpegnathos saltator (Indian jumping ant, DR-91)</option><option value="Heliconius_melpomene">Heliconius melpomene (Postman butterfly)</option><option value="Helicoverpa_armigera_gca023701775v1rs">Helicoverpa armigera (Cotton bollworm, SCD)</option><option value="Helicoverpa_zea_gca022581195v1rs">Helicoverpa zea (Corn earworm, HzStark_Cry1AcR)</option><option value="Helobdella_robusta">Helobdella robusta (Freshwater leech)</option><option value="Hermetia_illucens_gca905115235v1">Hermetia illucens (Black soldier fly)</option><option value="Hofstenia_miamia">Hofstenia miamia (Panther worm, MS-H3)</option><option value="Homalodisca_vitripennis_gca021130785v2rs">Homalodisca vitripennis (Glassy winged sharpshooter, AUS2020)</option><option value="Homarus_americanus_gca018991925v1">Homarus americanus (American lobster, GMGI-L3)</option><option value="Homarus_gammarus_gca958450375v1">Homarus gammarus (European lobster, reference)</option><option value="Hyalella_azteca_gca000764305v2">Hyalella azteca (Amphipod, HAZT.00-mixed)</option><option value="Hyalomma_asiaticum_gca013339685v1">Hyalomma asiaticum (Tick, Hyas-2018)</option><option value="Hydra_vulgaris_gca022113875v1rs">Hydra vulgaris (Swiftwater hydra, 105)</option><option value="Hydractinia_symbiolongicarpus_gca029227915v2rs">Hydractinia symbiolongicarpus (Hydrozoan, clone_291-10)</option><option value="Hylaeus_anthracinus_gca026225885v1rs">Hylaeus anthracinus (Anthricinan yellow-faced bee, JK02)</option><option value="Hylaeus_volcanicus_gca026283585v1rs">Hylaeus volcanicus (Volcano Masked Bee, JK05)</option><option value="Hymenolepis_microstoma_prjeb124">Hymenolepis microstoma (Rodent tapeworm)</option><option value="Hypsibius_exemplaris_gca002082055v1">Hypsibius exemplaris (Water bear tardigrade, Z151)</option><option value="Ichneumon_xanthorius_gca917499995v1">Ichneumon xanthorius (Ichneumon Wasp, reference)</option><option value="Ixodes_persulcatus_gca013358835v1">Ixodes persulcatus (Taiga tick, Iper-2018)</option><option value="Ixodes_scapularis_ise6">Ixodes scapularis (Black-legged tick, ISE6)</option><option value="Ixodes_scapularis_gca016920785v2">Ixodes scapularis (Black-legged tick, PalLabHiFi)</option><option value="Ixodes_scapularis">Ixodes scapularis (Black-legged tick, Wikel)</option><option value="Leguminivora_glycinivorella_gca023078275v1rs">Leguminivora glycinivorella (Soybean pod borer, SPB_JAAS2020)</option><option value="Lepeophtheirus_salmonis_gca016086655v3rs">Lepeophtheirus salmonis (Salmon louse, Lsal2020)</option><option value="Leptinotarsa_decemlineata_gca000500325v2">Leptinotarsa decemlineata (Colorado potato beetle, Imidocloprid resistant)</option><option value="Leptotrombidium_deliense">Leptotrombidium deliense (Harvest mite, UoL-UT)</option><option value="Limnephilus_lunatus_gca917563855v2">Limnephilus lunatus (Caddisflies, reference)</option><option value="Limnephilus_marmoratus_gca917880885v1">Limnephilus marmoratus (Caddisflies, reference)</option><option value="Limnephilus_rhombicus_gca929108145v2">Limnephilus rhombicus (Caddisflies, reference)</option><option value="Limnoperna_fortunei_gca944474755v1">Limnoperna fortunei (Golden mussel, reference)</option><option value="Limulus_polyphemus_gca000517525v1">Limulus polyphemus (Atlantic horseshoe crab)</option><option value="Linepithema_humile_gca000217595v1rs">Linepithema humile (Argentine ant)</option><option value="Lineus_longissimus_gca910592395v2">Lineus longissimus (Bootlace worm, reference)</option><option value="Lingula_anatina_gca001039355v2">Lingula anatina (Lamp shell, Amm_Jpn)</option><option value="Loa_loa">Loa loa (Eye worm, Cameroon SouthWest Province isolate)</option><option value="Lottia_gigantea">Lottia gigantea (Owl limpet)</option><option value="Lucilia_cuprina_gca022045245v1rs">Lucilia cuprina (Australian sheep blowfly, Lc7/37)</option><option value="Lucilia_cuprina">Lucilia cuprina (Australian sheep blowfly, LS)</option><option value="Lutzomyia_longipalpis">Lutzomyia longipalpis (Sand fly, Jacobina)</option><option value="Lutzomyia_longipalpis_gca024334085v1rs">Lutzomyia longipalpis (Sand fly, SR_M1_2022)</option><option value="Lytechinus_pictus_gca015342785v2rs">Lytechinus pictus (Painted urchin, DCL-2020)</option><option value="Lytechinus_variegatus_gca018143015v1">Lytechinus variegatus (Green sea urchin, NC3)</option><option value="Machimus_atricapillus_gca933228815v1">Machimus atricapillus (Kite-tailed Robberfly, reference)</option><option value="Macrosteles_quadrilineatus_gca028750875v1rs">Macrosteles quadrilineatus (Aster leafhopper, MER2022)</option><option value="Malaya_genurostris_gca030247185v2rs">Malaya genurostris (Mosquitos, Urasoe2022)</option><option value="Manduca_sexta_gca014839805v1rs">Manduca sexta (Tobacco hornworm, Smith_Timp_Sample1)</option><option value="Mayetiola_destructor">Mayetiola destructor (Hessian fly, Kansas Great Plain)</option><option value="Megachile_rotundata_gca000220905v1rs">Megachile rotundata (Alfalfa leafcutting bee)</option><option value="Megaselia_scalaris">Megaselia scalaris (Coffin fly)</option><option value="Melanaphis_sacchari_gca002803265v2rs">Melanaphis sacchari (Sugarcane aphid, LSU)</option><option value="Melitaea_cinxia_gca905220565v1">Melitaea cinxia (Glanville fritillary, reference)</option><option value="Mercenaria_mercenaria_gca014805675v2">Mercenaria mercenaria (Hard clam (quahog), YKG-2019)</option><option value="Microctonus_aethiopoides_gca030272935v1cm">Microctonus aethiopoides (Parasitoid wasp, French)</option><option value="Microctonus_aethiopoides_gca030347275v1cm">Microctonus aethiopoides (Parasitoid wasp, Irish)</option><option value="Microctonus_aethiopoides_gca030272655v1cm">Microctonus aethiopoides (Parasitoid wasp, Moroccan)</option><option value="Microctonus_hyperodae_gca030347285v1cm">Microctonus hyperodae (Parasitoid wasp, Lincoln)</option><option value="Microplitis_demolitor_gca026212275v2rs">Microplitis demolitor (Parasitoid wasp, Queensland-Clemson2020A)</option><option value="Microplitis_mediator_gca029852145v1rs">Microplitis mediator (Endoparasitoid wasp, UGA2020A)</option><option value="Mizuhopecten_yessoensis_gca002113885v2">Mizuhopecten yessoensis (Yesso scallop, PY_sf001)</option><option value="Mnemiopsis_leidyi">Mnemiopsis leidyi (Warty comb jelly)</option><option value="Monomorium_pharaonis_gca013373865v2">Monomorium pharaonis (Pharaoh ant, MP-MQ-018)</option><option value="Musca_domestica">Musca domestica (House fly, aabys)</option><option value="Mya_arenaria_gca026914265v1rs">Mya arenaria (Soft-shell clam, MELC-2E11)</option><option value="Myopa_tessellatipennis_gca943737955v1">Myopa tessellatipennis (Thick-headed flies, reference)</option><option value="Mytilus_californianus_gca021869535v1rs">Mytilus californianus (California mussel, M0D057914Y)</option><option value="Nasonia_vitripennis">Nasonia vitripennis (Jewel wasp, AsymCx)</option><option value="Necator_americanus_prjna72135">Necator americanus (New World hookworm, N. amaericanus Hunan isolate)</option><option value="Nematostella_vectensis">Nematostella vectensis (Starlet sea anemone, CH2 x CH6)</option><option value="Neodiprion_lecontei_gca021901455v1rs">Neodiprion lecontei (Redheaded pine sawfly, iyNeoLeco1)</option><option value="Neodiprion_pinetum_gca021155775v1rs">Neodiprion pinetum (White pine sawfly, iyNeoPine1)</option><option value="Nilaparvata_lugens_gca014356525v1rs">Nilaparvata lugens (Brown planthopper, BPH)</option><option value="Octopus_bimaculoides_gca001194135v2rs">Octopus bimaculoides (California two-spot octopus, UCB-OBI-ISO-001)</option><option value="Octopus_sinensis_gca006345805v1">Octopus sinensis (East Asian common octopus)</option><option value="Onchocerca_volvulus_prjeb513">Onchocerca volvulus (Nematode, O. volvulus Cameroon isolate)</option><option value="Onthophagus_taurus_gca000648695v2">Onthophagus taurus (Dung beetle)</option><option value="Ooceraea_biroi_gca003672135v1">Ooceraea biroi (Clonal raider ant, clonal line C1)</option><option value="Oppia_nitens_gca028296485v1rs">Oppia nitens (Oribatid soil mite, AA-2021)</option><option value="Orbicella_faveolata_gca002042975v1">Orbicella faveolata (Mountainous star coral, FL)</option><option value="Orchesella_cincta">Orchesella cincta (Springtail)</option><option value="Orussus_abietinus_gca000612105v2">Orussus abietinus (Parasitic wood wasp, OABI.00-Male)</option><option value="Ostrea_edulis_gca023158985v1rs">Ostrea edulis (European flat oyster, OE_ROSLIN_2020)</option><option value="Owenia_fusiformis_gca903813345v1">Owenia fusiformis (Segmented worms)</option><option value="Panonychus_citri_gca014898815v1rs">Panonychus citri (Citrus red mite, SS)</option><option value="Paramacrobiotus_metropolitanus_gca019649055v1rs">Paramacrobiotus metropolitanus (Water bear tardigrade, TYO)</option><option value="Parasteatoda_tepidariorum_gca000365465v3">Parasteatoda tepidariorum (Common house spider, Goettingen)</option><option value="Patella_pellucida_gca917208275v1">Patella pellucida (Blue-rayed limpet, reference)</option><option value="Patella_vulgata_gca932274485v1">Patella vulgata (Common limpet, reference)</option><option value="Patiria_miniata_gca015706575v1">Patiria miniata (Bat star starfish, m_02_andy)</option><option value="Pecten_maximus_gca902652985v1rs">Pecten maximus (Great Scallop)</option><option value="Pectinophora_gossypiella_gca024362695v1rs">Pectinophora gossypiella (Pink bollworm)</option><option value="Pediculus_humanus">Pediculus humanus corporis (Human body louse, USDA)</option><option value="Penaeus_chinensis_gca019202785v2rs">Penaeus chinensis (Fleshy prawn)</option><option value="Penaeus_japonicus_gca017312705v1">Penaeus japonicus (Kuruma shrimp, Ginoza2017)</option><option value="Penaeus_monodon_gca015228065v1">Penaeus monodon (Black tiger shrimp, SGIC_2016)</option><option value="Penaeus_vannamei_gca003789085v1">Penaeus vannamei (Pacific white shrimp)</option><option value="Phlebotomus_argentipes_gca947086385v1rs">Phlebotomus argentipes (Sand fly)</option><option value="Phlebotomus_papatasi">Phlebotomus papatasi (Sand fly, Israel)</option><option value="Phlebotomus_papatasi_gca024763615v2rs">Phlebotomus papatasi (Sand fly, M1)</option><option value="Phlebotomus_perniciosus_GCA_918844115.2">Phlebotomus perniciosus (Murcia)</option><option value="Plodia_interpunctella_gca027563975v1rs">Plodia interpunctella (Indianmeal moth, USDA-ARS_2022_Savannah)</option><option value="Pocillopora_damicornis_gca003704095v1">Pocillopora damicornis (Cauliflower coral, RSMAS)</option><option value="Pogonomyrmex_barbatus_gca000187915v1rs">Pogonomyrmex barbatus (Red harvester ant)</option><option value="Polistes_canadensis_gca001313835v1rs">Polistes canadensis (Red paper wasp, GaletaPanama2010)</option><option value="Polistes_dominula_gca001465965v1rs">Polistes dominula (European paper wasp, PdomPennStateAug2009)</option><option value="Polistes_fuscatus_gca010416935v1rs">Polistes fuscatus (Common paper wasp, 324)</option><option value="Pollicipes_pollicipes_gca011947565v2">Pollicipes pollicipes (Goose neck barnacle, AB1234)</option><option value="Pomacea_canaliculata_gca003073045v1">Pomacea canaliculata (Apple snail, SZHN2017)</option><option value="Pomphorhynchus_laevis_gca012934845v2gb">Pomphorhynchus laevis (Thorny-headed worm, GPI110)</option><option value="Portunus_trituberculatus_gca017591435v1">Portunus trituberculatus (Swimming crab, SZX2019)</option><option value="Priapulus_caudatus_gca000485595v2">Priapulus caudatus (Penis worm)</option><option value="Pristionchus_pacificus_prjna12644">Pristionchus pacificus (Nematode, PS312)</option><option value="Procambarus_clarkii_gca020424385v2">Procambarus clarkii (Red swamp crayfish, Jiangsu)</option><option value="Rhagoletis_pomonella_gca013731165v1">Rhagoletis pomonella (Apple magot fly, Grant_MI)</option><option value="Rhipicephalus_microplus_gca013339725v1">Rhipicephalus microplus (Southern cattle tick, Rmic-2018)</option><option value="Rhipicephalus_sanguineus_gca013339695v2rs">Rhipicephalus sanguineus (Brown dog tick, Rsan-2018)</option><option value="Rhodnius_prolixus">Rhodnius prolixus (Kissing bug, CDC)</option><option value="Rhopalosiphum_maidis_gca003676215v3">Rhopalosiphum maidis (Corn leaf aphid, BTI-1)</option><option value="Saccoglossus_kowalevskii_gca000003605v1">Saccoglossus kowalevskii (Acorn worm)</option><option value="Sarcoptes_scabiei_gca014595675v1">Sarcoptes scabiei (Itch mite, SSS_KF_BRIS2020)</option><option value="Schistocerca_americana_gca021461395v2rs">Schistocerca americana (American grasshopper, TAMUIC-IGC-003095)</option><option value="Schistocerca_cancellata_gca023864275v2rs">Schistocerca cancellata (South American locust, TAMUIC-IGC-003103)</option><option value="Schistocerca_gregaria_gca023897955v2rs">Schistocerca gregaria (Grasshoppers, iqSchGreg1)</option><option value="Schistocerca_nitens_gca023898315v2rs">Schistocerca nitens (Vagrant locust, TAMUIC-IGC-003100)</option><option value="Schistocerca_piceifrons_gca021461385v2rs">Schistocerca piceifrons (Central American locust, TAMUIC-IGC-003096)</option><option value="Schistocerca_serialis_gca023864345v3rs">Schistocerca serialis cubense (Grasshoppers, TAMUIC-IGC-003099)</option><option value="Schistosoma_haematobium_gca000699445v2rs">Schistosoma haematobium (Urinary blood fluke)</option><option value="Schistosoma_mansoni_prjea36577">Schistosoma mansoni (Flatworm)</option><option value="Sipha_flava_gca003268045v1">Sipha flava (Yellow sugarcane aphid, LNK)</option><option value="Sitophilus_oryzae_gca002938485v2rs">Sitophilus oryzae (Rice weevil)</option><option value="Solenopsis_invicta_gca016802725v1">Solenopsis invicta (Red fire ant, M01_SB)</option><option value="Spodoptera_frugiperda_gca023101765v3rs">Spodoptera frugiperda (Fall armyworm, SF20-4)</option><option value="Stegodyphus_dumicola_gca010614865v2rs">Stegodyphus dumicola (Social spider, AA2019)</option><option value="Stegodyphus_mimosarum">Stegodyphus mimosarum (African social velvet spider)</option><option value="Stomoxys_calcitrans">Stomoxys calcitrans (Stable fly, USDA)</option><option value="Strigamia_maritima">Strigamia maritima (Soil centipede)</option><option value="Strongylocentrotus_purpuratus">Strongylocentrotus purpuratus (Purple sea urchin, Spur 01)</option><option value="Strongyloides_ratti_prjeb125">Strongyloides ratti (Threadworm)</option><option value="Stylophora_pistillata_gca002571385v1">Stylophora pistillata (Hood coral, CSM Monaco)</option><option value="Teleopsis_dalmanni_gca002237135v2">Teleopsis dalmanni (Malaysian stalk-eyed fly, 2A)</option><option value="Tetranychus_urticae">Tetranychus urticae (Two-spotted spider mite)</option><option value="Thelohanellus_kitauei">Thelohanellus kitauei (Myxozoan endoparasite)</option><option value="Thrips_palmi_gca012932325v1rs">Thrips palmi (Melon Thrips, BJ-2018)</option><option value="Tigriopus_californicus_gca007210705">Tigriopus californicus (Copepod, San Diego)</option><option value="Topomyia_yanbarensis_gca030247195v1rs">Topomyia yanbarensis (Mosquitos, Yona2022)</option><option value="Toxorhynchites_rutilus_gca029784135v1rs">Toxorhynchites rutilus septentrionalis (Elephant mosquito, SRP)</option><option value="Trialeurodes_vaporariorum_gca011764245">Trialeurodes vaporariorum (Greenhouse whitefly, IVF)</option><option value="Tribolium_castaneum">Tribolium castaneum (Red flour beetle, Georgia GA2)</option><option value="Tribolium_madens_gca015345945v1rs">Tribolium madens (Black flour beetle, multiple individuals)</option><option value="Trichinella_spiralis">Trichinella spiralis (Pork worm, ISS_195)</option><option value="Trichogramma_pretiosum_gca000599845v3">Trichogramma pretiosum (Parasitoid wasp, Unisexual culture from Peru)</option><option value="Trichoplax_adhaerens">Trichoplax adhaerens (Placozoa, Grell-BS-1999)</option><option value="Trichuris_muris_prjeb126">Trichuris muris (Nematode)</option><option value="Uloborus_diversus_gca026930045v1rs">Uloborus diversus (Orb Weaver, 005)</option><option value="Uranotaenia_lowii_gca029784155v1rs">Uranotaenia lowii (Mosquitos, MFRU-FL)</option><option value="Varroa_destructor_gca002443255">Varroa destructor (Honeybee mite)</option><option value="Varroa_jacobsoni_gca002532875v1rs">Varroa jacobsoni (Varroa mite, VJ856)</option><option value="Venturia_canescens_gca019457755v1rs">Venturia canescens (Endoparasitoid wasp, UGA)</option><option value="Wyeomyia_smithii_gca029784165v1rs">Wyeomyia smithii (Pitcher plant Mosquito, HCP4-BCI-WySm-NY-G18)</option><option value="Zerene_cesonia_gca012273895v2rs">Zerene cesonia (Southern Dogface)</option><option value="Zeugodacus_cucurbitae_gca028554725v2rs">Zeugodacus cucurbitae (Melon fly, PBARC_wt_2022May)</option><option value="Zootermopsis_nevadensis">Zootermopsis nevadensis (Nevada dampwood termite)</option></select><label for="q">for</label></span><wbr></wbr><span class="inp-group"><input class="optional input inactive _string query ftext" size="30" name="q" value="" type="text" id="q" /><input value="Go" type="submit" class="fbutton" /></span><wbr></wbr></div><div class="ff-notes"><p class="search-example">e.g. <a class="nowrap" href="/Multi/Psychic?q=CPR34;site=ensemblunit">CPR34</a> or <a class="nowrap" href="/Multi/Psychic?q=chitin*;site=ensemblunit">chitin*</a></p></div></div></fieldset></form></div> </div> <div class="plain-box"> <div class="js_panel"> <input class="panel_type" type="hidden" value="SpeciesList" /> <div class="column_wrapper"><div class="column-two static_all_species"><h3>All genomes</h3> <p><select class="fselect _all_species"><option value="">-- Select a species --</option></select></p> <h3 class="space-above"></h3> <p><a href="/species.html">View full list of all species</a></p> </div><div class="column-two fave-genomes"><h3>Favourite genomes <a href="/Multi/Account/Login" class="_list_edit modal_link"><img src="/i/16/pencil.png" class="left-half-margin" title="Edit your favourites"></a></h3><div class="clear reorder_species hidden _species_sort_container"><p>For easy access to commonly used genomes, drag from the bottom list to the top one</p> <p><strong>Favourites</strong></p> <ul class="_favourites"></ul> <p><a href="#Done" class="button _list_done">Done</a> <a href="#Reset" class="button _list_reset">Restore default list</a></p> <p><strong>Other available species</strong></p> <ul class="_species"></ul> </div><div class="_species_fav_container species-list"> <div class="species-box-outer"> <div class="species-box"> <a href="/Caenorhabditis_elegans/Info/Index"><img src="/i/species/Caenorhabditis_elegans.png" alt="Caenorhabditis_elegans" title="Browse Caenorhabditis_elegans" class="badge-48"/></a> <a href="/Caenorhabditis_elegans/Info/Index" class="species-name">Caenorhabditis elegans (Nematode, N2)</a> <div class="assembly">WBcel235</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Anopheles_gambiae/Info/Index"><img src="/i/species/Anopheles_gambiae.png" alt="Anopheles_gambiae" title="Browse Anopheles_gambiae" class="badge-48"/></a> <a href="/Anopheles_gambiae/Info/Index" class="species-name">Anopheles gambiae (African malaria mosquito, PEST)</a> <div class="assembly">AgamP4</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Drosophila_melanogaster/Info/Index"><img src="/i/species/Drosophila_melanogaster.png" alt="Drosophila_melanogaster" title="Browse Drosophila_melanogaster" class="badge-48"/></a> <a href="/Drosophila_melanogaster/Info/Index" class="species-name">Drosophila melanogaster (Fruit fly)</a> <div class="assembly">BDGP6.46</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Apis_mellifera/Info/Index"><img src="/i/species/Apis_mellifera.png" alt="Apis_mellifera" title="Browse Apis_mellifera" class="badge-48"/></a> <a href="/Apis_mellifera/Info/Index" class="species-name">Apis mellifera (Honey bee, DH4)</a> <div class="assembly">Amel_HAv3.1</div> </div> </div></div><input name="fav_template" class="js_param" type="hidden" value=" <div class="species-box-outer"> <div class="species-box"> <a href="{{species.homepage}}"><img src="{{species.img}}" alt="{{species.name}}" title="Browse {{species.name}}" class="badge-48"/></a> <a href="{{species.homepage}}" class="species-name">{{species.common}}</a> <div class="assembly">{{species.assembly}}</div> </div> {{species.extra}} </div>" /><input value="<li id="species-{{species.key}}">{{species.common}} (<em>{{species.name}}</em>)</li>" type="hidden" class="js_param" name="list_template" /><input type="hidden" value="[{"assembly":"WBcel235","straintitle":"Caenorhabditis elegans","assembly_v":"WBcel235","strain_type":"","key":"Caenorhabditis_elegans","img":"/i/species/Caenorhabditis_elegans.png","group":"Nematoda","common":"Caenorhabditis elegans (Nematode, N2)","strainspage":"","favourite":1,"name":"Caenorhabditis_elegans","extra":"","homepage":"/Caenorhabditis_elegans/Info/Index","has_alt":0},{"strain_type":"","straintitle":"Anopheles 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nevadensis","assembly_v":"ZooNev1.0","assembly":"ZooNev1.0","has_alt":0,"homepage":"/Zootermopsis_nevadensis/Info/Index","extra":"","name":"Zootermopsis_nevadensis","favourite":0}]" name="species_list" class="js_param json" /><input value="[]" type="hidden" class="json js_param" name="strains_list" /><input value="Ajax/html_doc?db=core;module=GenomeList" type="hidden" class="js_param" name="ajax_refresh_url" /><input value="/Multi/Account/Favourites/Save" type="hidden" class="js_param" name="ajax_save_url" /><input class="js_param" name="display_limit" value="6" type="hidden" /><input value="Favourite" type="hidden" class="js_param" name="fave_text" /><input type="hidden" value="{}" name="taxon_labels" class="js_param json" /><input value="["Nematoda","Coleoptera","Diptera","Hemiptera","Hymenoptera","Lepidoptera","Collembola","Dictyoptera","Isoptera","Orthoptera","Phthiraptera","Thysanoptera","Trichoptera","Crustacea","Myriapoda","Chelicerata","Tardigrada","Priapulida","Acanthocephala","Annelida","Brachiopoda","Mollusca","Nemertea","Platyhelminthes","Rotifera","Echinodermata","Cephalochordata","Hemichordata","Acoelomorpha","Cnidaria","Ctenophora","Placozoa","Porifera","Metazoa","Eukaryota"]" type="hidden" class="js_param json" name="taxon_order" /></div></div> </div> </div> </div> </div> <div class="column-two"> <div class="column-padding no-right-margin"> <div class="plain-box"><h2>What's New in Release 60</h2> <ul> <li><p><strong>Updated gene sets</strong></p> <ul> <li><em>Culex quinquefasciatus</em> (Southern house mosquito, GCA_015732765.1) </li> </ul></li> <li><p><strong>New assembly for existing species</strong></p> <ul> <li><em>Anopheles coluzzii</em> (Mosquitos, GCA_943734685.1) </li> <li><em>Anopheles funestus</em> (African malaria mosquito, GCA_943734845.1) </li> <li><em>Lutzomyia longipalpis</em> (Sand fly, GCA_024334085.1) </li> </ul></li> <li><p><strong>Assembly and gene set data updated</strong></p> <ul> <li><em>Phlebotomus papatasi</em> (Sand fly, GCA_024763615.2) </li> </ul></li> <li><p><strong>New species</strong></p> <ul> <li><em>Anastrepha ludens</em> (Mexican fruit fly, GCA_028408465.1) </li> <li><em>Anastrepha obliqua</em> (WestIndian fruit fly, GCA_027943255.1) </li> <li><em>Bombus affinis</em> (Rusty patched bumble bee, GCA_024516045.2) </li> <li><em>Culex pipiens pallens</em> (Northern house mosquito, GCA_016801865.2) </li> <li><em>Cylas formicarius</em> (Sweet potato weevil, GCA_029955315.1) </li> <li><em>Diorhabda carinulata</em> (Northern tamarisk beetle, GCA_026250575.1) </li> <li><em>Diorhabda sublineata</em> (Subtropical tamarisk beetle, GCA_026230105.1) </li> <li><em>Hylaeus anthracinus</em> (Anthricinan yellow-faced bee, GCA_026225885.1) </li> <li><em>Hylaeus volcanicus</em> (Volcano Masked Bee, GCA_026283585.1) </li> <li><em>Malaya genurostris</em> (Mosquitos, GCA_030247185.2) </li> <li><em>Microplitis demolitor</em> (Parasitoid wasp, GCA_026212275.2) </li> <li><em>Microplitis mediator</em> (Endoparasitoid wasp, GCA_029852145.1) </li> <li><em>Mytilus californianus</em> (California mussel, GCA_021869535.1) </li> <li><em>Phlebotomus argentipes</em> (Sand fly, GCA_947086385.1) </li> <li><em>Plodia interpunctella</em> (Indianmeal moth, GCA_027563975.1) </li> <li><em>Spodoptera frugiperda</em> (Fall armyworm, GCA_023101765.3) </li> <li><em>Topomyia yanbarensis</em> (Mosquitos, GCA_030247195.1) </li> <li><em>Toxorhynchites rutilus septentrionalis</em> (Elephant mosquito, GCA_029784135.1) </li> <li><em>Uranotaenia lowii</em> (Sandfly, GCA_029784155.1) </li> <li><em>Wyeomyia smithii</em> (Pitcher plant Mosquito, GCA_029784165.1) </li> <li><em>Zeugodacus cucurbitae</em> (Melon fly, GCA_028554725.2) </li> </ul></li> <li><p><strong>Other Updates</strong></p> <ul> <li><em>Drosophila rhopaloa</em> (Fruit fly) - Patched incorrectly assigned GCA_000236305.2 to correct INSDC accession GCA_018152115.1 </li> <li><em>Athalia rosae</em> - The older GCA_000344095.2 assembly replaced with newer GCA_917208135.1. Compara reference updated. </li> <li><em>Drosophila yakuba</em> - The older GCA_000005975.1 assembly replaced with newer GCA_016746365.2. </li> <li><em>Melitaea cinxia</em> - The older GCA_000716385.1 assembly replaced with newer GCA_905220565.1. Compara reference updated. </li> </ul></li> <li><p><strong>Planned updates:</strong></p> <ul> <li>Release 61: <ul> <li><em>Drosophila melanogaster</em> (Fruit fly) - New annotation (Flybase Release 6.54) of assembly GCA_000001215.4. </li> <li><em>Bombus terrestris</em> (Buff-tailed bumble-bee) - Compara reference genome (Metazoa & Protostome protein trees) updated to newer GCA_910591885.2 assembly. The older GCA_000214255.1 will be removed. </li> <li><em>Crassostrea gigas</em> - New RefSeq annotation to be added for GCA_902806645.1. Homotypic synonym <em>C. gigas</em> species name to be updated to '<em>Magallana gigas</em>'. </li> </ul> </li> </ul></li> <li><p><strong>Updated BioMarts for all gene and variation data</strong></p></li> <li><strong>Updated pan-taxonomic gene trees and homologies</strong> </li> </ul> <div id="rapidbox"> <h2>Ensembl Rapid Release</h2> <p><b>New genome assemblies are now being released to the <a target="_blank" href="http://beta.ensembl.org">Ensembl Beta site</a> </b>.</p> <p>All Rapid Release data, including release 65, has been uploaded into the new Ensembl Beta site.</p> <p>The Ensembl Rapid Release website will remain active for the foreseeable future, however, the data and species set will no longer be updated.</p> <p class="right">Find out more on our <a href="https://www.ensembl.info/2024/11/14/we-will-be-freezing-ensembl-rapid-release/" target="_blank">blog</a></p> </div> </div> <div class="plain-box"> <h2 id="archivesites">Archive sites</h2> <p>Archive of release 59 of EnsemblMetazoa: <a href="https://eg59-metazoa.ensembl.org">eg59-metazoa.ensembl.org</a> (May 2024)</p> <p>Archive of release 56 of EnsemblMetazoa: <a href="https://eg56-metazoa.ensembl.org">eg56-metazoa.ensembl.org</a> (Feb 2023)</p> <p>Archive of release 52 of EnsemblMetazoa: <a href="https://eg52-metazoa.ensembl.org">eg52-metazoa.ensembl.org</a> (Dec 2021)</p> <p>Archive of release 49 of EnsemblMetazoa: <a href="https://eg49-metazoa.ensembl.org">eg49-metazoa.ensembl.org</a> (Dec 2020)</p> <p>Archive of release 45 of EnsemblMetazoa: <a href="https://eg45-metazoa.ensembl.org">eg45-metazoa.ensembl.org</a> (Sep 2019)</p> </div> <div class="plain-box"> <h2 id="funding">Funding</h2> <p>Ensembl Metazoa receives funding from <a href="https://infravec2.eu">Infravec2</a>, to serve as a data delivery mechanism for that project. Infravec2 is an international and interdisciplinary research project on insect vectors of human and animal disease, including mosquitoes, sandflies and other flies. This project has received funding from the European Unions Horizon 2020 research and innovation programme under grant agreement No 731060.</p> <p class="rtecenter"><img alt="" src="/img/Infravec2logo.png" style="height:124px; width:247px" /><img alt="" src="/img/European_Commission.png" style="height:124px; width:179px" /></p> <p>The biting midge genome resequencing and annotation is funding by a grant from the Bioinformatics and Biological Resources Fund of the United Kingdom Biotechnology and Biological Sciences Research Council (grant number BB/M028372/1) to The Pirbright Institute and the European Bioinformatics Institute.</p> <p class="rtecenter"><img alt="" src="/img/bbsrc-small.png" style="height:90px; width:238px" /></p> <p>The <em>Branchiostoma lanceolatum</em> (amphioxus) genome is provided by Corbel, an initiative of thirteen biological and medical research infrastructures creating a platform for harmonised access to biological and medical samples, technologies and data services. This project receives funding from the European Unions Horizon 2020 research and innovation programme under grant agreement No 654248.</p> <p class="rtecenter"><img src="https://www.corbel-project.eu/fileadmin/corbel/html_templates/media/gfx/corbel_logo.png" style="height:124px; width:137px" /></p> </div> <div class="plain-box"> <p><a href="http://ensemblgenomes.org/">Ensembl Genomes</a> is developed by <a href="http://www.ebi.ac.uk">EMBL-EBI</a> and is powered by the <a href="http://www.ensembl.org">Ensembl</a> software system for the analysis and visualisation of genomic data. For details of our funding please <a href="/info/about/credits.html">click here</a>.</p> <p class="rtecenter"> <a href="http://www.ebi.ac.uk/"><img alt="EMBL-EBI logo" src="/img/ebi_logo.png" style="height:30px; vertical-align:middle" /></a> <a href="http://www.ensembl.org" style="padding-left: 20px;"><img alt="Ensembl logo" src="/img/empowered.png" style="height:20px; vertical-align:middle" /></a> <a href="https://globalbiodata.org/scientific-activities/global-core-biodata-resources"><img alt="Global Bio Data logo" src="/img/GCBR-Logo-RGB.svg" style="width:100px;height:73px;padding-left: 12px;vertical-align:middle"/></a> <a href="https://www.elixir-europe.org/platforms/data/core-data-resources" style="padding-left: 12px;"><img alt="Elixir Logo" src="/img/Elixir_CDR-mini.png" style="vertical-align:middle" /></a> </p> </div> </div> </div> </div> </div> </div> <div id="wide-footer"> <div class="column-wrapper"> <div class="column-two left"> <p> Ensembl Metazoa release 60 - October 2024 © 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