CINXE.COM
Looking for data? Try SGD Downloads! - Tutorials, Information, Help - Alliance of Genome Resources Community Forum
<!DOCTYPE html> <html lang="en"> <head> <meta charset="utf-8"> <title>Looking for data? Try SGD Downloads! - Tutorials, Information, Help - Alliance of Genome Resources Community Forum</title> <meta name="description" content="SGD distributes data in various files in the SGD Downloads site. For information regarding genes and IDs, etc., check out the chromosomal_features directory. There you will find various files, including: Saccharomyce&hellip;"> <meta name="generator" content="Discourse 3.3.0.beta3-dev - https://github.com/discourse/discourse version 5361c3704d4fb30882cac18c14af98c9226332a2"> <link rel="icon" type="image/png" href="https://community.alliancegenome.org/uploads/default/optimized/1X/03a6737fa032dcc7b6b39eed6f2d0ae8ffcbcad8_2_32x32.png"> <link rel="apple-touch-icon" type="image/png" href="https://community.alliancegenome.org/uploads/default/optimized/1X/d0a649bda118ecbfde158d2e012a0648410be778_2_180x180.png"> <meta name="theme-color" media="all" content="#ffffff"> <meta name="viewport" content="width=device-width, initial-scale=1.0, minimum-scale=1.0, user-scalable=yes, viewport-fit=cover"> <link rel="canonical" href="https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759" /> <link rel="search" type="application/opensearchdescription+xml" href="https://community.alliancegenome.org/opensearch.xml" title="Alliance of Genome Resources Community Forum Search"> <link href="/stylesheets/color_definitions_graceful_5_2_60c78ae2fbfbea27ed79fea82f0b738399837276.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" class="light-scheme"/> <link href="/stylesheets/desktop_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="desktop" /> <link href="/stylesheets/checklist_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="checklist" /> <link href="/stylesheets/discourse-details_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="discourse-details" /> <link href="/stylesheets/discourse-lazy-videos_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="discourse-lazy-videos" /> <link href="/stylesheets/discourse-local-dates_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="discourse-local-dates" /> <link href="/stylesheets/discourse-narrative-bot_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="discourse-narrative-bot" /> <link href="/stylesheets/discourse-presence_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="discourse-presence" /> <link href="/stylesheets/docker_manager_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="docker_manager" /> <link href="/stylesheets/footnote_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="footnote" /> <link href="/stylesheets/poll_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="poll" /> <link href="/stylesheets/spoiler-alert_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="spoiler-alert" /> <link href="/stylesheets/poll_desktop_b2f77246ba180221bf90d8c1205c127849f61a23.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="poll_desktop" /> <link href="/stylesheets/desktop_theme_2_2d85a299b3d113f24b1d2ece39702d8da10b1610.css?__ws=community.alliancegenome.org" media="all" rel="stylesheet" data-target="desktop_theme" data-theme-id="2" data-theme-name="graceful"/> <script defer="" src="/theme-javascripts/558b669bcc308982cd95f3da9bbd7604aea87fd7.js?__ws=community.alliancegenome.org" data-theme-id="10" nonce="CIK5LSx3MM5Dq1Bc7Ndu7CVI2"></script> <meta id="data-ga-universal-analytics" data-tracking-code="UA-98765810-1" data-json="{"cookieDomain":"auto"}" data-auto-link-domains=""> <script async src="https://www.googletagmanager.com/gtag/js?id=UA-98765810-1" nonce="CIK5LSx3MM5Dq1Bc7Ndu7CVI2"></script> <script defer src="/assets/google-universal-analytics-v4-e154af4adb3c483a3aba7f9a7229b8881cdc5cf369290923d965a2ad30163ae8.js" data-discourse-entrypoint="google-universal-analytics-v4" nonce="CIK5LSx3MM5Dq1Bc7Ndu7CVI2"></script> <link rel="alternate nofollow" type="application/rss+xml" title="RSS feed of 'Looking for data? Try SGD Downloads!'" href="https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759.rss" /> <meta property="og:site_name" content="Alliance of Genome Resources Community Forum" /> <meta property="og:type" content="website" /> <meta name="twitter:card" content="summary_large_image" /> <meta name="twitter:image" content="https://community.alliancegenome.org/uploads/default/original/1X/a69c864854d9b8ca3fafa83b8dc5d64b479b90f8.png" /> <meta property="og:image" content="https://community.alliancegenome.org/uploads/default/original/1X/d0a649bda118ecbfde158d2e012a0648410be778.png" /> <meta property="og:url" content="https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759" /> <meta name="twitter:url" content="https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759" /> <meta property="og:title" content="Looking for data? Try SGD Downloads!" /> <meta name="twitter:title" content="Looking for data? Try SGD Downloads!" /> <meta property="og:description" content="SGD distributes data in various files in the SGD Downloads site. For information regarding genes and IDs, etc., check out the chromosomal_features directory. There you will find various files, including: Saccharomyces cerevisiae GFF - genes and other chromosomal features, including IDs, coordinates, and descriptions in General Feature Format SGD_features.tab - genes and other chromosomal features, including IDs, coordinates, and descriptions in tab-delimited format dbxref.tab - external IDs ..." /> <meta name="twitter:description" content="SGD distributes data in various files in the SGD Downloads site. For information regarding genes and IDs, etc., check out the chromosomal_features directory. There you will find various files, including: Saccharomyces cerevisiae GFF - genes and other chromosomal features, including IDs, coordinates, and descriptions in General Feature Format SGD_features.tab - genes and other chromosomal features, including IDs, coordinates, and descriptions in tab-delimited format dbxref.tab - external IDs ..." /> <meta property="og:article:section" content="Model Organism: Yeast" /> <meta property="og:article:section:color" content="92278F" /> <meta property="og:article:section" content="Tutorials, Information, Help" /> <meta property="og:article:section:color" content="92278F" /> <meta property="article:published_time" content="2024-08-13T15:33:55+00:00" /> <meta property="og:ignore_canonical" content="true" /> </head> <body class="crawler browser-update"> <div class="background-container"></div> <header> <a href="/"> Alliance of Genome Resources Community Forum </a> </header> <div id="main-outlet" class="wrap" role="main"> <div id="topic-title"> <h1> <a href="/t/looking-for-data-try-sgd-downloads/7759">Looking for data? Try SGD Downloads!</a> </h1> <div class="topic-category" itemscope itemtype="http://schema.org/BreadcrumbList"> <span itemprop="itemListElement" itemscope itemtype="http://schema.org/ListItem"> <a href="/c/model-organism-yeast/tutorials-information-help/240" class="badge-wrapper bullet" itemprop="item"> <span class='badge-category-bg' style='background-color: #92278F'></span> <span class='badge-category clear-badge'> <span class='category-name' itemprop='name'>Model Organism: Yeast</span> </span> </a> <meta itemprop="position" content="1" /> </span> <span itemprop="itemListElement" itemscope itemtype="http://schema.org/ListItem"> <a href="/c/model-organism-yeast/tutorials-information-help/240" class="badge-wrapper bullet" itemprop="item"> <span class='badge-category-bg' style='background-color: #92278F'></span> <span class='badge-category clear-badge'> <span class='category-name' itemprop='name'>Tutorials, Information, Help</span> </span> </a> <meta itemprop="position" content="2" /> </span> </div> </div> <div itemscope itemtype='http://schema.org/DiscussionForumPosting'> <meta itemprop='headline' content='Looking for data? Try SGD Downloads!'> <link itemprop='url' href='https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759'> <meta itemprop='datePublished' content='2024-08-13T15:33:55Z'> <meta itemprop='articleSection' content='Tutorials, Information, Help'> <meta itemprop='keywords' content=''> <div itemprop='publisher' itemscope itemtype="http://schema.org/Organization"> <meta itemprop='name' content='Alliance of Genome Resources'> <div itemprop='logo' itemscope itemtype="http://schema.org/ImageObject"> <meta itemprop='url' content='https://community.alliancegenome.org/uploads/default/original/1X/4a081d50c42d1ba08cf9f94e86de0d5ed8a8cf3f.png'> </div> </div> <div id='post_1' class='topic-body crawler-post'> <div class='crawler-post-meta'> <span class="creator" itemprop="author" itemscope itemtype="http://schema.org/Person"> <a itemprop="url" href='https://community.alliancegenome.org/u/stacia'><span itemprop='name'>stacia</span></a> </span> <link itemprop="mainEntityOfPage" href="https://community.alliancegenome.org/t/looking-for-data-try-sgd-downloads/7759"> <span class="crawler-post-infos"> <time datetime='2024-08-13T15:33:55Z' class='post-time'> August 13, 2024, 3:33pm </time> <meta itemprop='dateModified' content='2024-08-13T16:39:45Z'> <span itemprop='position'>1</span> </span> </div> <div class='post' itemprop='text'> <p><a href="https://www.yeastgenome.org">SGD</a> distributes data in various files in the <a href="http://sgd-archive.yeastgenome.org/curation/">SGD Downloads</a> site.</p> <p>For information regarding genes and IDs, etc., check out the <a href="http://sgd-archive.yeastgenome.org/curation/chromosomal_feature/">chromosomal_features directory</a>. There you will find various files, including:</p> <ul> <li><em>Saccharomyces cerevisiae</em> GFF - genes and other chromosomal features, including IDs, coordinates, and descriptions in General Feature Format</li> <li>SGD_features.tab - genes and other chromosomal features, including IDs, coordinates, and descriptions in tab-delimited format</li> <li>dbxref.tab - external IDs</li> </ul> <p>For information regarding various types of annotations, see the <a href="http://sgd-archive.yeastgenome.org/curation/literature/">literature directory</a> where you can find a variety of annotation files:</p> <ul> <li>alleles.tab</li> <li>biochemical_pathways.tab</li> <li>functional_complementation.tab</li> <li>gene2pmid.tab</li> <li>genetic_loci.tab</li> <li>go_slim_mapping.tab</li> <li>interaction_data.tab</li> <li>molecularComplexes.tab</li> <li>phenotype_data.tab</li> <li>regulation.tab</li> <li>yeastHumanDisease.tab</li> </ul> <p>To access the SGD Downloads site, click on ‘<a href="http://sgd-archive.yeastgenome.org">Download</a>’ in the black toolbar running across the top of most <a href="https://www.yeastgenome.org">SGD</a> webpages.</p> </div> <div itemprop="interactionStatistic" itemscope itemtype="http://schema.org/InteractionCounter"> <meta itemprop="interactionType" content="http://schema.org/LikeAction"/> <meta itemprop="userInteractionCount" content="0" /> <span class='post-likes'></span> </div> <div itemprop="interactionStatistic" itemscope itemtype="http://schema.org/InteractionCounter"> <meta itemprop="interactionType" content="http://schema.org/CommentAction"/> <meta itemprop="userInteractionCount" content="0" /> </div> </div> </div> </div> <footer class="container wrap"> <nav class='crawler-nav'> <ul> <li itemscope itemtype='http://schema.org/SiteNavigationElement'> <span itemprop='name'> <a href='/' itemprop="url">Home </a> </span> </li> <li itemscope itemtype='http://schema.org/SiteNavigationElement'> <span itemprop='name'> <a href='/categories' itemprop="url">Categories </a> </span> </li> <li itemscope itemtype='http://schema.org/SiteNavigationElement'> <span itemprop='name'> <a href='/guidelines' itemprop="url">FAQ/Guidelines </a> </span> </li> <li itemscope itemtype='http://schema.org/SiteNavigationElement'> <span itemprop='name'> <a href='/tos' itemprop="url">Terms of Service </a> </span> </li> <li itemscope itemtype='http://schema.org/SiteNavigationElement'> <span itemprop='name'> <a href='/privacy' itemprop="url">Privacy Policy </a> </span> </li> </ul> </nav> <p class='powered-by-link'>Powered by <a href="https://www.discourse.org">Discourse</a>, best viewed with JavaScript enabled</p> </footer> <div class="buorg"><div>Unfortunately, <a href="https://www.discourse.org/faq/#browser">your browser is unsupported</a>. Please <a href="https://browsehappy.com">switch to a supported browser</a> to view rich content, log in and reply.</div></div> </body> </html>