CINXE.COM

PDBx/mmCIF Dictionary Resources

<!DOCTYPE html> <html lang="en"> <head> <!-- File: head_common_bs.html Updates: 2013-Aug-24 jdw bootstrap 3.0.0 2013-Oct-06 jdw add fonts --> <meta charset="utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <link href="/assets/css/bootstrap/css/bootstrap.css" rel="stylesheet"> <!-- local application css --> <link href="/styles/app.css" rel="stylesheet"> <link href="/styles/prettify.css" rel="stylesheet"> <!-- font definitions --> <!-- 'gothic-league' --> <link href="/assets/webfonts/LeagueGothic/stylesheet.css" rel="stylesheet"> <!-- 'titilliumlight' --> <link href="/assets/webfonts/Titillium/fonts.css" rel="stylesheet"> <!-- 'colaborate-thinregular' --> <link href="/assets/webfonts/Colaborate/colaborate_thin_macroman/stylesheet.css" rel="stylesheet"> <!-- 'droid_sansregular' --> <link href="/assets/webfonts/DroidSans/droidsans_regular_macroman/stylesheet.css" rel="stylesheet"> <!-- 'existencelight' --> <link href="/assets/webfonts/Existence/existence_light_macroman/stylesheet.css" rel="stylesheet"> <!-- 'existencestencil_light' --> <link href="/assets/webfonts/Existence/existence_stencillight_macroman/stylesheet.css" rel="stylesheet"> <!-- 'existenceunicase_light' --> <link href="/assets/webfonts/Existence/existence_unicaselight_macroman/stylesheet.css" rel="stylesheet"> <!-- 'robotothin' --> <link href="/assets/webfonts/Roboto/roboto_thin_macroman/stylesheet.css" rel="stylesheet"> <!-- 'robotolight' --> <link href="/assets/webfonts/Roboto/roboto_light_macroman/stylesheet.css" rel="stylesheet"> <!-- HTML5 shim, for IE 6-8 support of HTML5 elements --> <!--[if lt IE 9]> <script src="/assets/js/html5shiv.js"></script> <script src="/assets/js/respond.min.js"></script> <![endif]--> <!-- end of file File: head_common_bs.html --> <title>PDBx/mmCIF Dictionary Resources</title> </head> <body> <div id="wrap"> <!-- common page navigation --> <!-- File: page_header_bs.html Update: Aug 18, 2013 J. Westbrook Update: Sep 12, 2013 J. Westbrook add form details Update: Oct 6, 2013 J. Westbrook overhaul Update: Jan 9, 2015 J. Westbrook update - Update: Jul 8, 2017 E. Peisach - make v50 default Update: Jul 14, 2017 E. Peisach - Add IHM Update: Jul 7, 2018 E. Peisach - Add ma, remove mdb --> <div class="navbar navbar-inverse navbar-fixed-top"> <div class="container"> <div class="navbar-header"> <button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".nav-collapse"> <span class="icon-bar"></span> <span class="icon-bar"></span> <span class="icon-bar"></span> </button> <a class="my-navbar-brand" href="/pdbx-mmcif-home-page.html">PDBx/mmCIF</a> </div> <!-- end navbar-header --> <div class="collapse navbar-collapse"> <ul class="nav navbar-nav"> <!-- <li class="active"><a href="/index.html">Home</a></li> --> <li><a href="/pdbx-mmcif-home-page.html">Home</a></li> <!-- Dictionary pull-down --> <li class="dropdown"> <a href="#" class="dropdown-toggle" data-toggle="dropdown">Dictionaries<b class="caret"></b></a> <ul class="dropdown-menu"> <li class="divider"></li> <li class="dropdown-header">Browse the PDBx/mmCIF Dictionaries</li> <li><a href="/dictionaries/mmcif_pdbx_v50.dic/Index">Current version (V5) PDBx/mmCIF</a></li> <li><a href="/dictionaries/mmcif_pdbx_v5_next.dic/Index">Development Version PDBx/mmCIF</a></li> <li><a href="/dictionaries/mmcif_ddl.dic/Index">Dictionary Definition Language V2</a></li> <li><a href="/dictionaries/mmcif_pdbx_vrpt.dic/Index">wwPDB Validation</a></li> <li class="divider"></li> <li class="dropdown-header">Browse Other Dictionaries</li> <li><a href="/dictionaries/mmcif_ihm_ext.dic/Index">IHMCIF</a></li> <li><a href="/dictionaries/mmcif_ihm_flr_ext.dic/Index">flrCIF</a></li> <li><a href="/dictionaries/mmcif_pdbx_v40.dic/Index">Previous PDBx/mmCIF V4</a></li> <li><a href="/dictionaries/mmcif_std.dic/Index">Original mmCIF</a></li> <li><a href="/dictionaries/mmcif_nmr-star.dic/Index">NMRIF/NMR-STAR</a></li> <li><a href="/dictionaries/mmcif_nef.dic/Index">NMR Exchange Format (NEF)</a></li> <li><a href="/dictionaries/mmcif_sas.dic/Index">SAS</a></li> <li><a href="/dictionaries/mmcif_ndb_ntc.dic/Index">NDB NTC</a></li> <li><a href="/dictionaries/mmcif_em.dic/Index">3DEM</a></li> <li><a href="/dictionaries/mmcif_img.dic/Index">Image mmCIF</a></li> <li><a href="/dictionaries/mmcif_sym.dic/Index">Symmetry</a></li> <li><a href="/dictionaries/mmcif_biosync.dic/Index">Biosync</a></li> <li><a href="/dictionaries/mmcif_ma.dic/Index">ModelCIF</a></li> </ul> </li> <!-- Documentation pull-down --> <li class="dropdown"> <a href="#" class="dropdown-toggle" data-toggle="dropdown">Documentation<b class="caret"></b></a> <ul class="dropdown-menu"> <li class="divider"></li> <li><a href="/docs/faqs/pdbx-mmcif-faq-general.html">PDBx/mmCIF FAQ</a></li> <li><a href="/docs/user-guide/guide.html">PDBx/mmCIF User Guide</a></li> <li class="divider"></li> <li class="dropdown-header">Format</li> <li><a href="/docs/large-pdbx-examples/index.html">Large Structures in PDBx/mmCIF</a></li> <li><a href="/docs/pdb_to_pdbx_correspondences.html">PDB to PDBx Format Correspondences</a></li> <li><a href="http://wwpdb.org/task/mmcif" target="_blank">wwPDB PDBx/mmCIF Working Group</a></li> <li class="divider"></li> <li class="dropdown-header">Software</li> <li><a href="/docs/software-resources.html">Software resources</a></li> <li><a href="/docs/sw-examples/cpp/html">C++ Examples</a></li> <li><a href="/docs/sw-examples/python/html">Python Examples</a></li> <li class="divider"></li> <li class="dropdown-header">Reference</li> <li><a href="/docs/tutorials/mechanics/pdbx-mmcif-syntax.html">File syntax</a> </li> <li> <a href="/docs/tutorials/mechanics/pdbx-mmcif-dict-struct.html">Dictionary organization</a></li> <li><a href="/docs/tutorials/content/atomic-description.html">Atomic description</a></li> <li><a href="/docs/tutorials/content/molecular-entities.html">Molecular description</li> <li><a href="/docs/pubs/pdbx-mmcif-references.html">Reference List</a></li> <li><a href="/docs/tutorials/glossary/early-history.html">Early history</a></li> <li><a href="/docs/tutorials/glossary/pdbx-mmcif-glossary.html">Glossary</a></li> </ul> </li> <li><a href="/dictionaries/downloads.html">Downloads</a></li> <li><a href="mailto:pdbx-mmcif-help@mail.wwpdb.org">Contact Us</a></li> </ul> <!-- end nav --> <a href="http://www.wwpdb.org/" class="pull-right right-icon" title="Worldwide Protein Data Bank"> <img alt="A Member of the wwPDB" src="/assets/images/wwpdb/wwpdb-logo-menubar-20.png" width="107" height="20"></a> <form class="navbar-form pull-right" id="searchSite" action="/cgi-bin/swish/swish.cgi" method="get" enctype="application/x-www-form-urlencoded"> <button type="submit" class="btn btn-wwpdb-green"> <span class="glyphicon glyphicon-search"></span></a> </button> <div class="form-group"> <input type="text" placeholder="Search current dictionary" class="form-control" size=25 name="query"> </div> <input type="hidden" name="sort" value="swishrank" /> <input type="hidden" name="si" value="0" /> </form> <!-- right-justified icon in navbar --> </div><!--/.nav-collapse --> </div> <!-- end container --> </div> <!-- end navbar --> <!-- End file page_header_bs.html --> <!-- Begin page content --> <div class="container"> <div class="jumbotron"> <div class="container"> <h1 class="my-font-robotothin">PDBx/mmCIF Dictionary Resources</h1> <p> This site provides information about the format, dictionaries and related software tools used by the Worldwide Protein Data Bank (<a href="http://www.wwpdb.org/">wwPDB</a>) to define data content for depositon, annotation and archiving of PDB entries. </p> <div class="row"> <div class="col-md-offset-4"> <a href="/dictionaries/mmcif_pdbx_v50.dic/Index" class="btn btn-wwpdb-green btn-lg">Browse the current dictionary &raquo;</a> </div> </div> </div> </div> <div class="container"> <div class="row"> <div class="col-md-4"> <h2>Dictionaries</h2> <ul class="ul-lg"> <li><a href="/dictionaries/mmcif_pdbx_v50.dic/Index">Browse the current dictionary&raquo;</a></li> <li><a href="/dictionaries/downloads.html">Download/view all dictionaries &raquo;</a></li> <li><a href="/pdbx-mmcif-search.html">Search dictionaries&raquo;</a></li> </ul> <!-- <p><a class="btn btn-wwpdb-green btn-default" href="#">Dictionary Downloads &raquo;</a></p> --> </div> <div class="col-md-4"> <h2>Documentation</h2> <ul class="ul-lg"> <li><a href="/docs/pdb_to_pdbx_correspondences.html">PDB -&gt; PDBx/mmCIF correspondences &raquo;</a></li> <li><a href="https://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/beginner%E2%80%99s-guide-to-pdbx-mmcif">Understanding PDBx/mmCIF format</a></li> <li><a href="/docs/large-pdbx-examples/index.html">PDBx/mmCIF for large structures &raquo;</a></li> <li><a href="/docs/software-resources.html">Software resources &raquo;</a></li> <li> <a href="/docs/sw-examples/cpp/html/index.html">C++ &raquo;</a> and <a href="/docs/sw-examples/python/html/index.html">Python &raquo;</a> programming examples</li> <li><a href="/docs/tutorials/mechanics/pdbx-mmcif-syntax.html">File syntax &raquo;</a> and <a href="/docs/tutorials/mechanics/pdbx-mmcif-dict-struct.html">dictionary organization &raquo;</a> </li> <li><a href="/docs/tutorials/content/atomic-description.html">Atomic &raquo;</a> and <a href="/docs/tutorials/content/molecular-entities.html">molecular &raquo;</a> descriptions</li> <li><a href="/docs/pubs/pdbx-mmcif-references.html">References &raquo;</a></li> <li><a href="/docs/tutorials/glossary/early-history.html">Early history &raquo;</a></li> <li><a href="/docs/tutorials/glossary/pdbx-mmcif-glossary.html">Glossary &raquo;</a></li> <li><a href="/docs/user-guide/guide.html">User guide</a></li> </ul> </div> <div class="col-md-4"> <h2>FAQs</h2> <p class="pg-lg"> Questions about PDBx/mmCIF format, and data content, or software tools? Check out the <a href="/docs/faqs/pdbx-mmcif-faq-general.html">FAQ&raquo;</a> </p> </div> </div> </div> <!-- end main page container --> </div> <!-- end wrap --> <!-- File: page_javascript_bs.html Update: Oct 6, 2013 jdw --> <script src="/assets/js/jquery/core/jquery-1.11.0.min.js" ></script> <script src="/assets/css/bootstrap/js/bootstrap.js" > </script> <!-- local application js --> <script src="/js/MyApp.js"></script> <!-- end of file page_javascript_bs.html --> <!-- File: page_footer_bs.html Update: Oct 6, 2013 J. Westbrook --> <div id="footer"> <div class="container"> <p class="muted credit">&copy; wwPDB </p> </div> </div> <!-- end file page_footer_bs.html --> </body> </html>

Pages: 1 2 3 4 5 6 7 8 9 10