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href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-peer-review-history"> Peer Review History </a></li> <li data-anchor="loc-author-proof" name="loc-author-proof"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-author-proof"> Author Proof </a></li> <li data-anchor="loc-early-version" name="loc-early-version"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-early-version"> Early Version </a></li> <li data-anchor="loc-linking-to-preprints" name="loc-linking-to-preprints"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-linking-to-preprints"> Linking to Preprints </a></li> <li data-anchor="loc-cross-mark" name="loc-cross-mark"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-cross-mark"> CrossMark </a></li> <li data-anchor="loc-press-and-media" name="loc-press-and-media"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-press-and-media"> Press and Media </a></li> <li data-anchor="loc-indexing-and-archiving" name="loc-indexing-and-archiving"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-indexing-and-archiving"> Indexing and Archiving </a></li> <li data-anchor="loc-reprints" name="loc-reprints"><a href="https://journals-plos-org.translate.goog/plospathogens/s/accepted-manuscripts?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-reprints"> Reprints </a></li> </ul> </nav> <article> <h1>Accepted Manuscripts</h1> <div data-section-id="511"> <h2><a data-anchor-id="5113" id="loc-accept-decisions" name="loc-accept-decisions"></a>Accept Decisions</h2> <p>There are two types of accept decisions: editorial accept and formal accept.</p> <h4>Editorial accept</h4> <p>Editorial acceptance means that the manuscript is provisionally accepted pending final checks for formatting and technical requirements. You will be notified of these requirements by email. See details of our final checks below.</p> <p>The editorial acceptance date is the acceptance date that will appear on the published article.</p> <h4>Formal accept</h4> <p>Formal acceptance is issued when the final checks are complete. At this time, the manuscript will be sent to our production department.</p> </div> <div data-section-id="875"> <div class="block-basic"><strong>Communication with authors</strong> <br><br> All communication about editorial accept decisions and final checks will be sent to the corresponding author. When the manuscript is formally accepted, all authors will be notified. All authors will also be notified when the article appears online. </div> </div> <div data-section-id="515"> <h2><a data-anchor-id="4719" id="loc-final-checks" name="loc-final-checks"></a>Final Checks</h2> <p>When a manuscript is editorially accepted, it will go through a final round of checks to ensure the formatting and content meet our technical requirements. Some of the manuscript elements checked at this stage include:</p> <ul> <li>Author names and affiliations</li> <li>Funding statement</li> <li>Competing interests statement</li> <li>Data availability statement</li> <li>Figure and table formatting</li> <li>File names for figures, tables, and supporting information</li> </ul> <p><br> You can expedite the progress of your manuscript during this stage by reviewing our submission guidelines beforehand and by responding promptly to our queries.</p> </div> <div data-section-id="839"> <div class="block-important"> When you receive a decision of editorial accept, this will be your last opportunity to correct any errors in your manuscript. Please check your files very carefully, because you will not be able to check or change anything after this point.  </div> </div> <div data-section-id="2288"> <h2><a id="loc-peer-review-history" name="loc-peer-review-history" data-anchor-id="8420"></a>Peer Review History</h2> <p>If your submission is accepted for publication, you’ll be invited to opt-in to publish the peer review history of your manuscript using a form in our submission system. The peer review history package includes the editorial decision letter for each revision, with reviews, and your responses to reviewer comments, including attachments. Read more about <a data-parent-id="13" href="https://journals-plos-org.translate.goog/plospathogens/s/editorial-and-peer-review-process?_x_tr_sl=pl&_x_tr_tl=ru&_x_tr_hl=en-GB#loc-peer-review-history">published peer review history</a>.</p> </div> <div data-section-id="838"> <h2><a data-anchor-id="5420" id="loc-author-proof" name="loc-author-proof"></a>Author Proof</h2> <p>You will receive an author proof before publication. This is an opportunity to ensure your manuscript is scientifically accurate. We will not be making copyedit changes at this stage.</p> <p>When your proof is ready, you will receive an email to download it from the ProTrak production server. Please monitor your inbox for this message, which will be sent from noreply@apexcovantage.com. To ensure delivery, add noreply@apexcovantage.com to your address book. </p> </div> <div data-section-id="1527"> <h2><a data-anchor-id="7031" id="loc-early-version" name="loc-early-version"></a>Early Version</h2> <p><i>PLOS Pathogens</i> will publish an uncorrected page proof of your manuscript as an early version of your manuscript in advance of the final article at the same time that you receive your author proof. The date the early version is posted will be your article’s publication date. The final article, which will include any changes made during the proof stage, will be published to the same URL and have the same DOI. The early version will remain accessible to readers. 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