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Rhea search
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margin-top: 5px;"> <rhea-search-examples></rhea-search-examples> <a id="advanced-search-button">Advanced search</a> <a id="browse-button">Browse</a> </div> </div> </header> <nav role="navigation" itemscope itemtype="http://www.schema.org/SiteNavigationElement" class="row-container"> <a itemprop="url" href="/structuresearch"> <svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0z" fill="none"/><path d="M4.59 6.89c.7-.71 1.4-1.35 1.71-1.22.5.2 0 1.03-.3 1.52-.25.42-2.86 3.89-2.86 6.31 0 1.28.48 2.34 1.34 2.98.75.56 1.74.73 2.64.46 1.07-.31 1.95-1.4 3.06-2.77 1.21-1.49 2.83-3.44 4.08-3.44 1.63 0 1.65 1.01 1.76 1.79-3.78.64-5.38 3.67-5.38 5.37 0 1.7 1.44 3.09 3.21 3.09 1.63 0 4.29-1.33 4.69-6.1H21v-2.5h-2.47c-.15-1.65-1.09-4.2-4.03-4.2-2.25 0-4.18 1.91-4.94 2.84-.58.73-2.06 2.48-2.29 2.72-.25.3-.68.84-1.11.84-.45 0-.72-.83-.36-1.92.35-1.09 1.4-2.86 1.85-3.52.78-1.14 1.3-1.92 1.3-3.28C8.95 3.69 7.31 3 6.44 3 5.12 3 3.97 4 3.72 4.25c-.36.36-.66.66-.88.93l1.75 1.71zm9.29 11.66c-.31 0-.74-.26-.74-.72 0-.6.73-2.2 2.87-2.76-.3 2.69-1.43 3.48-2.13 3.48z"/></svg> <span itemprop="name">Structure search</span> </a> <a itemprop="url" href="/mapping"> <svg xmlns="http://www.w3.org/2000/svg" enable-background="new 0 0 24 24" height="24" viewBox="0 0 24 24" width="24"><g><rect fill="none" height="24" width="24" x="0"/></g><g><g><g><path d="M9.01,14H2v2h7.01v3L13,15l-3.99-4V14z M14.99,13v-3H22V8h-7.01V5L11,9L14.99,13z"/></g></g></g></svg> <span itemprop="name">Retrieve/ID mapping</span> </a> <a itemprop="url" class="sparqlEndpoint" href="https://sparql.rhea-db.org/sparql"> <svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0z" fill="none"/><path d="M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76 0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71 0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71 0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76 0 5-2.24 5-5s-2.24-5-5-5z"/></svg> <span itemprop="name">SPARQL</span> </a> <a itemprop="url" href="/help/download"> <svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0z" fill="none"/><path d="M19.35 10.04C18.67 6.59 15.64 4 12 4 9.11 4 6.6 5.64 5.35 8.04 2.34 8.36 0 10.91 0 14c0 3.31 2.69 6 6 6h13c2.76 0 5-2.24 5-5 0-2.64-2.05-4.78-4.65-4.96zM17 13l-5 5-5-5h3V9h4v4h3z"/></svg> <span itemprop="name">Download</span> </a> <a itemprop="url" href="/help"> <svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0V0z" fill="none"/><path d="M19.07 4.93l-1.41 1.41C19.1 7.79 20 9.79 20 12c0 4.42-3.58 8-8 8s-8-3.58-8-8c0-4.08 3.05-7.44 7-7.93v2.02C8.16 6.57 6 9.03 6 12c0 3.31 2.69 6 6 6s6-2.69 6-6c0-1.66-.67-3.16-1.76-4.24l-1.41 1.41C15.55 9.9 16 10.9 16 12c0 2.21-1.79 4-4 4s-4-1.79-4-4c0-1.86 1.28-3.41 3-3.86v2.14c-.6.35-1 .98-1 1.72 0 1.1.9 2 2 2s2-.9 2-2c0-.74-.4-1.38-1-1.72V2h-1C6.48 2 2 6.48 2 12s4.48 10 10 10 10-4.48 10-10c0-2.76-1.12-5.26-2.93-7.07z"/></svg> <span itemprop="name">Help</span> </a> <a itemprop="url" href="/feedback"> <svg xmlns="http://www.w3.org/2000/svg" height="24" viewBox="0 0 24 24" width="24"><path d="M0 0h24v24H0z" fill="none"/><path d="M20 4H4c-1.1 0-1.99.9-1.99 2L2 18c0 1.1.9 2 2 2h16c1.1 0 2-.9 2-2V6c0-1.1-.9-2-2-2zm0 4l-8 5-8-5V6l8 5 8-5v2z"/></svg> <span itemprop="name">Feedback</span> </a> </nav> <main class="column-container"> <section class="advanced-search" style="display: none"></section> <section class="retrieveform"> <h2>Retrieve Rhea reactions</h2> <form enctype="multipart/form-data" method="post" action="/mapping/" id="mapping-form"> <div class="formcontainer column-container"> <div id="fromDatabase" class="advanced-search-inputs"> <label>Identifier type <sup class="tooltip-from-html" data-tooltip-content=" <div> <p>Choose the resource from which you want to map to Rhea. For ontologies the default mapping uses the ontology's relationships to retrieve Rhea reactions that are linked either directly or indirectly to your query IDs. Choose the <em>exact</em> option if you want only direct mappings. <a href="/help/id-mapping">More</a>...</p> </div> "><i class="material-icons info">help_outline</i></sup> <select id="from-database" name="from"> <optgroup label="Reactions"> <option value="Rhea">Rhea</option> <option value="EcoCyc">EcoCyc</option> <option value="MetaCyc">MetaCyc</option> <option value="Reactome">Reactome</option> <option value="KEGG">KEGG</option> <option value="M-CSA">M-CSA</option> </optgroup> <optgroup label="Molecules/Compounds"> <option value="InChIKey">InChIKey</option> <option value="ChEBI">ChEBI</option> <option value="ChEBI (exact)">ChEBI (exact)</option> </optgroup> <optgroup label="Functions"> <option value="EC">Enzyme classification</option> <option value="GO">Gene Ontology</option> <option value="GO (exact)">Gene Ontology (exact)</option> </optgroup> </select> </label> </div> <textarea placeholder="Provide a list of identifiers..." id="mappingQuery" name="query"></textarea> <div class="uploadFilex"> <strong>OR</strong> upload your own file: <input id="uploadfile" name="file" class="uploadList" type="file"/> </div> <!-- <input id="newTabCheckbox" name="related" type="checkbox"><label for="newTabCheckbox">Map to all related reactions too.</label> --> <div class="row-container"> <clear-button label="Clear"></clear-button> <submit-button label="Submit"></submit-button> </div> </div> </form> </section> </main> <footer class="row-container" style="text-align: center;"> <div class="row-container footer-logo"> <img alt="SIB logo" width="70px" height="37px" src="/style/images/sib_logo_short.png" /> <span> <a href="/help/license-disclaimer">License & Disclaimer</a> | <a href="https://www.sib.swiss/privacy-policy">Privacy Policy</a> </span> </div> <div class="row-container footer-logo"> <a href="https://www.elixir-europe.org/platforms/data/core-data-resources"> <img width="64px" height="64px" id="elixir-cdr-logo" alt="Elixir-cdr-logo" src="/style/images/elixir-cdr.gif"> </a> <h4>ELIXIR Core Data Resource</h4> </div> <div class="row-container footer-logo"> <a href="https://globalbiodata.org/scientific-activities/global-core-biodata-resources/"> <img width="64px" height="64px" id="global-cdr-logo" alt="Global-cdr-logo" src="/style/images/GCBR-Logo-RGB.svg"> </a> <h4>Global Core Biodata Resource</h4> </div> </footer> <script type="module" src="/js/home_mapping-bundle-b6bf534ab33332c56b7e.js"></script> </body> </html>