Tutorials: Get more out of BioCyc

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</div> <div class="toolbar-dropdown" role="menuitem"> <button class="toolbar-dropbtn">Pathway Tools <i class="fa fa-caret-down"></i> </button> <div class="toolbar-dropdown-content" role="menu"> <p> Desktop Application<br> Bring the power of BioCyc.org securely in-house, with the abilities to create and<br> edit PGDBs, perform metabolic modeling, and query/update using APIs. </p> <a href="https://pathwaytools.com" role="menuitem">More Information<br></a> <a href="https://biocyc.org/download-bundle.shtml" role="menuitem">Academic Licenses</a> <a href="https://share.hsforms.com/1qZSgeFYGSVqqSTKohHQITA3ipje" role="menuitem">Commercial Licenses</a>  </div> </div> <div class="toolbar-dropdown" role="menuitem"> <button class="toolbar-dropbtn">Help <i class="fa fa-caret-down"></i> </button> <div class="toolbar-dropdown-content" role="menu"> <a href="/login-help.shtml" role="menuitem">Login/Subscription Problems</a> <div class="sub-toolbar-dropdown" role="menuitem"> <button 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role="menuitem">How to Cite </a> <a href="/contact.shtml" role="menuitem">Contact Us/Licensing/Support</a> </div> </div> </div> <div class="pure-u-lg-7-12 pure-u-md-7-12 pure-u-sm-1-1" style="height: 49px"> <div class="login pure-g" id="loginMenuBar">  <div id='subscriptionBanner' style="display:flex;flex-direction:row;justify-content: space-around;width:100%"> </div> <script type='text/javascript'> ajaxUpdater('subscriptionBanner', '/subscription-banner'); </script> </div> </div>  <div style="text-align: left; float: right; position: relative; left: 0;"> </div> </div> </div> </div> <div> <div class="whitespace-wide-margin-border" style="max-width: 1200px; margin-left: auto; margin-right: auto;display:flex;flex-flow:row wrap;align-items:center;justify-content:space-around"> <div id="small-logo">  <img src="/graphics2021/BioCyc.svg" alt="BioCyc" onclick="window.location.href='https://biocyc.org'" > </div> <div> <div style="margin: 20px 0 0 10px;" id="changeDBAndQuickSearch"> </div> </div> </div> </div>  </div>     <div id="msgPopup"></div>  <div class="navBox" id="navBox" style="display:none" role="navigation" aria-label="Operations"> <div class='navBoxExpansion'> <a href="#" onclick='toggleNavBox()' aria-controls="navBoxBody" aria-expanded=true role="button"> <span id="navBoxHide"> <img src='/navbox-hide.png' alt='' width='9' height='9'> hide </span> <span id="navBoxShow"> <img src='/navbox-show.png' alt='' width='9' height='9'> show operations </span> </a> </div> <div id='navBoxBody'> <br> <div id='navBoxTitle'> <div class="navBoxItem"><i><a href="organism-summary" class="dynDBName" ></a></i></div> <div class="navBoxLabel" id='objtypeNavBox'></div> <div class='navBoxItem' id='objnameNavBox'></div> </div> <span class='section1'>OPERATIONS</span> <div id="navBoxOps"> </div> </div> </div>  <div class=pageContentStatic id="mainContent">  <h1>Online Tutorials</h1> <h2>What Can I Do with BioCyc? 2-Minute Tutorials<img src="new.png" alt="new"> </h2> Each 2-minute tutorial introduces a key area of BioCyc functionality in two minutes or less.<p> <ul> <li><a href=https://youtu.be/y4dJ_5SrOYs>Find information about a gene</a></li> <li><a href=https://youtu.be/nF03Eun5xt4>Find information about a metabolite or a metabolic pathway</a></li> <li><a href=https://youtu.be/Py3rLBSny8I>Genome Browser </a> </li> <li><a href=https://youtu.be/PZ5hjYyIX8o>Extract the sequence of a gene, a protein, or of a chromosomal region</a></li>   <li><a href=https://youtu.be/QAlaWtsHVow>Find all proteins in an organism containing a given sequence pattern</a></li> <li><a href=https://youtu.be/ugeXEU1ukYs> Produce a multiple sequence alignment </a> </li> <li><a href=https://youtu.be/fjWfienKXYc>Search for genes or proteins via multiple criteria </a> </li> <li><a href=https://youtu.be/wWbIEjmohhY>Navigate through the metabolic network of an organism</a></li> <li><a href=https://youtu.be/wolj5WUHAB8>Compare information about a list of known genes (via SmartTables)</a> </li> <li><a href=https://youtu.be/8sXzuXLDyhU>Compare the metabolic potentials of several organisms </a></li> <li><a href=https://youtu.be/tmsiimv55JE>Analyze transcriptomics and metabolomics data</a> </li> <li><a href=https://youtu.be/c25WghdphM8>Comparative Genome Alignments </a> </li> </ul> <hr> <h2>In-Depth BioCyc Tutorials on YouTube </h2> <p>These BioCyc tutorials present both basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. To access a tutorial, click the left triangle to list the tutorial segments. </p> <ul> <details> <summary> <b>Tutorial #1: Introduction to BioCyc </b> </summary> <ul> <li><a href="https://youtu.be/2eCrAUF0-jg"> <b>Quick Introduction to BioCyc</b> (4:30) </a> <li><a href="https://youtu.be/vPbJUyyMrbo"> Searching in BioCyc (17:00) </a> <li><a href="https://youtu.be/y13lfIQRd3Y"> Genes (15:00) </a> <li><a href="https://www.youtube.com/watch?v=VQIYRgMXlJc"> Genome Browser (11:45) </a> <li><a href="http://youtu.be/vmanLbAOlFw">Pathways (13:19) </a> <li><a href="http://youtu.be/A0POxCr7I_E">Reactions (3:51) </a> <li><a href="http://youtu.be/FjMmDLpDZb4">Compounds (5:48)</a> </ul> </details> <details> <summary><b>Tutorial #2: Introduction to SmartTables</b> </summary> <p>The following Tutorial will guide you through SmartTables, which enable you to create, upload, share, and analyze sets of genes, metabolites, pathways, and sequence sites. The Tutorial is broken up into parts, ranging from basic operations to more advanced uses such as gene expression analysis and metabolomics. To view, click one of the links below.</p> <ul> <li><a href="https://youtu.be/lNfHYqSAkwE">SmartTables Overview (4:30)</a> <li><a href=" https://youtu.be/4nQlYQJl278">SmartTables Basics (12:43)</a> <li><a href="https://youtu.be/JsnPSgr01-c">SmartTables Transformations (8:08) </a> <li><a href=" https://youtu.be/Kc7RIDerRa8">SmartTables Import and Export (9:00) </a> <li><a href="https://youtu.be/u4KN0iFHl9o">SmartTables Gene Expression Analysis (7:40)</a> <li><a href="https://youtu.be/ZtC6-X4UrcA">Metabolomics Analysis with SmartTables (6:45) </a> </ul> </details> <details> <summary><b>Tutorial #3: Zoomable Metabolic Map, Comparative Tools, Regulatory Network </b> </summary> <p>This Tutorial introduces users to many of the advanced tools available on the BioCyc.org website for navigating cellular networks, analyzing large-scale datasets, and comparing organisms. </p> <ul> <li><a href="https://youtu.be/D1auFR-YtyA">The Cellular Overview: Navigating metabolic networks (17:15) </a> <li><a href="https://www.youtube.com/watch?v=edlc_pwgszw">Comparative Genomics (21:06) </a> <li><a href="https://www.youtube.com/watch?v=_25kvmBC9wE">Ortholog Viewing (10:02) </a> <li><a href="https://youtu.be/AtXsbRwBFvo">The Regulatory Overview -- exploring transcriptional regulatory networks (15:21) </a> </ul> </details> <details> <summary><b>Tutorial #4: Omics Data Analysis </b></summary> <p?This Tutorial will show you how to use BioCyc's tools for omics data analysis, including the cellular omics viewer, the omics dashboard, and other tools.</p> <ul> <li><a href="https://youtu.be/k6ZUBjHDH_0">Transcriptomics Analysis Tools [brief tour (2:40) </a></li> <li> <a href="https://www.youtube.com/watch?v=gDiNdp3hnWg"> Metabolomics Analysis Tools (3:26) <a href="https://www.youtube.com/watch?v=RVkmpDTdcIU&t=2s">[click here for a detailed tutorial]</a> </li> <li><a href="https://youtu.be/lfea1lKsiWk">Omics Dashboard (16:35)</a> </li> <li> <a href="https://youtu.be/eDMcTDAMVXU">Omics Dashboard Part (24:29) </a> </li> </ul> </details> <details> <summary><b>Tutorial #5: Pathway Collages </b> </summary> <p>Pathway collages are multi-pathway diagrams that you can customize in various respects, such as overlaying omics data, altering the relative positions of pathways, and modifying connections among pathways. This Tutorial will show you how to generate, customize and export high-quality pathway-collage diagrams showing collections of user-specified pathways.</p> <ul> <li> <a href="https://www.youtube.com/watch?v=WW0nVpXAusg&feature=youtu.be">Pathway Collages (22:39)</a> </li> </ul> </details> <details> <summary><b>Tutorial #6: Creating a Pathway/Genome Database </b></summary> <p>This Tutorial walks you through the process of building a BioCyc-like Pathway/Genome Database (PGDB) for an organism with a sequenced and annotated genome. Learn how to predict metabolic pathways and operons, how to revise gene and protein annotations, build metabolic pathways, make protein complexes, add metabolic reactions and compounds, and assign Gene Ontology (GO) terms to genes. Build a PGDB for your own lab or for the whole scientific community. Segments: </p> <ul> <li><a href="https://youtu.be/8GTifTlmnZA">Part 1A: Introduction to Database Building and Pathologic (14:04) </a></li> <li> <a href="https://youtu.be/bn1DHXBpVQk">Part 1B: Building a Database: Detailed Pathologic Example (23:53) </a></li> <li><a href="https://youtu.be/va6UY6OdW1k">Part 2A: General Editing Strategies (8:00) </a> <li> <a href="https://youtu.be/eeMVaP9H7-k">Part 2B: Creating and Editing Reactions and Compounds (17:32)</a> <li> <a href="https://youtu.be/msYOJ3lwzck">Part 2C: Updating Proteins, Citations, GO Terms, and Enzymatic Reactions (26:10) </a> <li><a href="https://youtu.be/06kXAwJUUj0">Part 2D: Making and Editing Pathways (9:42) </a> </ul> <details> <summary><b>Tutorial #7: Using the Structured Advanced Query Page </b></summary> <p>The Structured Advanced Query Page enables construction of complex queries to PGDBs, and queries across one or more databases in the BioCyc collection. In this Tutorial, you'll learn about:</p> <ul> <li>The basic steps of setting up an advanced query <li>Four examples of increasingly complex queries, including how to query across multiple databases <li>Where to learn more about the structure of BioCyc databases </ul> <p>To view, click one of the links below.</p> <ul> <li><a href="https://youtu.be/3fT1T6nu3C4">Structured Advanced Query Page Quick Introduction (6:27) </a> <li> <a href="https://youtu.be/4RSexCHLbI8">Structured Advanced Query Page Full Webinar (42:15) </a> </ul> </ul> </details> <hr> <h2> Coursera Course on Pathway Bioinformatics </h3> <p>An online course on pathway bioinformatics by Peter Karp is available on <a href="https://www.coursera.org/learn/hacking-covid-19--course-4-searching-for-drug-targets">Coursera</a> and on <a href="https://stepik.org/course/132910/promo">Stepik</a> (free). </p> <hr> <a name="ZOOM"> <h2>Recordings from Live BioCyc Tutorials</h2> </a> We have been conducting tutorials and other special webinars on Zoom since 2021. We record many of these and make them available here. <ul> <details> <summary> <b>"Introduction to BioCyc for new Life-Science Graduate Students and PostDocs" </b> </summary> <ul> <li> <a href="https://youtu.be/NYxIzdqqjEo"> "Overview of the BioCyc Microbial Genomes Web Portal", Presented by Peter Karp, November 3, 2021.</a> </li> <li><a href="https://youtu.be/AoaG19AKCxw"> "Comparative Tools, Searches, and SmartTables", Presented by Peter Midford, November 10, 2021.</a></li> <li> <a href="https://youtu.be/Cu06BozE800"> "BioCyc Omics Analysis Tools", Presented by Suzanne Paley, November 17, 2021.</a></li> </ul> </details> <p></p> <details> <summary> <b>PGDB Editing Tutorial, presented by Ron Caspi.</b> </summary> <ul> <li><a href="https://youtu.be/xNTo-5K8B0g"> Part 1, March 3, 2022. </a></li> <li> <a href="https://youtu.be/xY0zuJX9dEg">Part 2, March 10, 2022.</a></li> </ul> </details> <p></p> <li><i>Helicobacter pylori</i> Genome Database Tutorial, presented by Ron Caspi, March 17, 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Match</option> <option value="substr">Substring Match</option> </select> <div class = "mdSubstringInput" id="mmdSubstringAC1"> <input id="mmdKeyword1" type="text" aria-label='Value for constraint 2'> <div id="mmdKWContainer1"></div> </div> </div> <div id="mnumericInput1" style="display:none" class="flexRow"> <select id="mmdNumOp1" onchange="updateForOp(1, 'mmdNumOp1', 'mmdNum1', 'm')" aria-label='Numeric operator for constraint 2'> <option value="e" selected>= (approx.)</option> <option value="lt"><</option> <option value="lte">≤</option> <option value="gt">></option> <option value="gte">≥</option> <option value="enum">Select Values</option> </select> <input id="mmdNum1" type="text" aria-label='Value for constraint 2'> </div> <div id="mmdEnumContainer1" style="display:none"> <select id="mmdEnum1" multiple aria-label='Value for constraint 2'> </select> </div> </div> </div> <div id="mclause2" style="display:none"> <select id="mconnector2" aria-label='Connector for constraint 3'> <option value='and' selected>AND</option> <option value='or'>OR</option> </select> <input id="mmdDelete2" type="button" value="Remove Constraint" onclick='mdRemoveClause(2, "m")' aria-label='Remove Constraint 3'> <br> <div class="flexRowWrap"> <select id="mmdSlot2" onChange='updateMetadataSlot(2, "m")' aria-label='Property for constraint 3'> <option value=false selected>Select Property</option> </select> <select id="mmdConstraint2" onChange='updateMetadataSlot(2, "m")' aria-label='Operator for constraint 3'> <option value="c" selected>is</option> <option value="nc">is not</option> <option value="a">has any value</option> <option value="n">has no value</option> </select> <div id="mkeywordInput2" style="display:none" class="flexRow"> <select id="mmdKeywordOp2" onchange="updateForOp(2, 'mmdKeywordOp2', 'mmdSubstringAC', 'm')" aria-label='Operator for constraint 3'> <option value="enum" selected>Exact Match</option> <option value="substr">Substring Match</option> </select> <div class = "mdSubstringInput" id="mmdSubstringAC2"> <input id="mmdKeyword2" type="text" aria-label='Value for constraint 3'> <div id="mmdKWContainer2"></div> </div> </div> <div id="mnumericInput2" style="display:none" class="flexRow"> <select id="mmdNumOp2" onchange="updateForOp(2, 'mmdNumOp2', 'mmdNum2', 'm')" aria-label='Numeric operator for constraint 3'> <option value="e" selected>= (approx.)</option> <option value="lt"><</option> <option value="lte">≤</option> <option value="gt">></option> <option value="gte">≥</option> <option value="enum">Select Values</option> </select> <input id="mmdNum2" type="text" aria-label='Value for constraint 3'> </div> <div id="mmdEnumContainer2" style="display:none"> <select id="mmdEnum2" multiple aria-label='Value for constraint 3'> </select> </div> </div> </div> <div id="mclause3" style="display:none"> <select id="mconnector3" aria-label='Connector for constraint 4'> <option value='and' selected>AND</option> <option value='or'>OR</option> </select> <input id="mmdDelete3" type="button" value="Remove Constraint" onclick='mdRemoveClause(3, "m")' aria-label='Remove Constraint 4'> <br> <div class="flexRowWrap"> <select id="mmdSlot3" onChange='updateMetadataSlot(3, "m")' aria-label='Property for constraint 4'> <option value=false selected>Select Property</option> </select> <select id="mmdConstraint3" onChange='updateMetadataSlot(3, "m")' aria-label='Operator for constraint 4'> <option value="c" selected>is</option> <option value="nc">is not</option> <option value="a">has any value</option> <option value="n">has no value</option> </select> <div id="mkeywordInput3" style="display:none" class="flexRow"> <select id="mmdKeywordOp3" onchange="updateForOp(3, 'mmdKeywordOp3', 'mmdSubstringAC3', 'm')" aria-label='Operator for constraint 4'> <option value="enum" selected>Exact Match</option> <option value="substr">Substring Match</option> </select> <div class = "mdSubstringInput" id="mmdSubstringAC3"> <input id="mmdKeyword3" type="text" aria-label='Value for constraint 4'> <div id="mmdKWContainer3"></div> </div> </div> <div id="mnumericInput3" style="display:none" class="flexRow"> <select id="mmdNumOp3" onchange="updateForOp(3, 'mmdNumOp3', 'mmdNum3', 'm')" aria-label='Numeric operator for constraint 4'> <option value="e" selected>= (approx.)</option> <option value="lt"><</option> <option value="lte">≤</option> <option value="gt">></option> <option value="gte">≥</option> <option value="enum">Select Values</option> </select> <input id="mmdNum3" type="text" aria-label='Value for constraint 4'> </div> <div id="mmdEnumContainer3" style="display:none"> <select id="mmdEnum3" multiple aria-label='Value for constraint 4'> </select> </div> </div> </div> <div id="mclause4" style="display:none"> <select id="mconnector4" aria-label='Connector for constraint 5'> <option value='and' selected>AND</option> <option value='or'>OR</option> </select> <input id="mmdDelete4" type="button" value = "Remove Constraint" onclick='mdRemoveClause(4, "m")' aria-label='Remove Constraint 5'> <br> <div class="flexRowWrap"> <select id="mmdSlot4" onChange='updateMetadataSlot(4, "m")' aria-label='Property for constraint 5'> <option value=false selected>Select Property</option> </select> <select id="mmdConstraint4" onChange='updateMetadataSlot(4, "m")' aria-label='Operator for constraint 5'> <option value="c" selected>is</option> <option value="nc">is not</option> <option value="a">has any value</option> <option value="n">has no value</option> </select> <div id="mkeywordInput4" style="display:none" class="flexRow"> <select id="mmdKeywordOp4" onchange="updateForOp(4, 'mmdKeywordOp4', 'mmdSubstringAC4', 'm')" aria-label='Operator for constraint 5'> <option value="enum" selected>Exact Match</option> <option value="substr">Substring Match</option> </select> <div class = "mdSubstringInput" id="mmdSubstringAC4"> <input id="mmdKeyword4" type="text" aria-label='Value for constraint 5'> <div id="mmdKWContainer4"></div> </div> </div> <div id="mnumericInput4" style="display:none"> <select id="mmdNumOp4" onchange="updateForOp(4, 'mmdNumOp4', 'mmdNum4', 'm')" aria-label='Numeric operator for constraint 5'> <option value="e" selected>= (approx.)</option> <option value="lt"><</option> <option value="lte">≤</option> <option value="gt">></option> <option value="gte">≥</option> <option value="enum">Select Values</option> </select> <input id="mmdNum4" type="text" aria-label='Value for constraint 5'> </div> <div id="mmdEnumContainer4" style="display:none"> <select id="mmdEnum4" multiple aria-label='Value for constraint 5'> </select> </div> </div> </div> <div id="mclause5" style="display:none"> <select id="mconnector5" aria-label='Connector for constraint 6'> <option value='and' selected>AND</option> <option value='or'>OR</option> </select> <input id="mmdDelete5" type="button" value="Remove Constraint" onclick='mdRemoveClause(5, "m")' aria-label='Remove Constraint 6'> <br> <div class="flexRowWrap"> <select id="mmdSlot5" onChange='updateMetadataSlot(5, "m")' aria-label='Property for constraint 6'> <option value=false selected>Select Property</option> </select> <select id="mmdConstraint5" onChange='updateMetadataSlot(5, "m")' aria-label='Operator for constraint 6'> <option value="c" selected>is</option> <option value="nc">is not</option> <option value="a">has any value</option> <option value="n">has no value</option> </select> <div id="mkeywordInput5" style="display:none" class="flexRow"> <select id="mmdKeywordOp5" onchange="updateForOp(5, 'mmdKeywordOp5', 'mmdSubstringAC5', 'm')" aria-label='Operator for constraint 6'> <option value="enum" selected>Exact Match</option> <option value="substr">Substring Match</option> </select> <div class = "mdSubstringInput" id="mmdSubstringAC5"> <input id="mmdKeyword5" type="text" aria-label='Value for constraint 6'> <div id="mmdKWContainer5"></div> </div> </div> <div id="mnumericInput5" style="display:none" class="flexRow"> <select id="mmdNumOp5" onchange="updateForOp(5, 'mmdNumOp5', 'mmdNum5', 'm')" aria-label='Numeric operator for constraint 6'> <option value="e" selected>= (approx.)</option> <option value="lt"><</option> <option value="lte">≤</option> <option value="gt">></option> <option value="gte">≥</option> <option value="enum">Select Values</option> </select> <input id="mmdNum5" type="text" aria-label='Value for constraint 6'> </div> <div id="mmdEnumContainer5" style="display:none"> <select id="mmdEnum5" multiple aria-label='Value for constraint 6'> </select> </div> </div> </div> <br> <div class="flexRow"> <input id="maddClause" type="button" value = "Add Constraint" onclick='mdAddClause("m")' style="display:none"> <input id="mmdSearch" type="button" value = "Find Organisms" onclick = 'processMdQuery(true, "m")'> </div> <div id="mmdResults" class='yui3-skin-sam'></div> </div> <div id="multiorgSavedTab" class='multiorgselectorTab' style="overflow-y:auto"> <div style="padding-bottom:20px"> <span>Database lists include both predefined lists and lists that are saved as SmartTables that you can edit from your <a href="/smarttables" target="new.window">My SmartTables</a> page. To add all organisms from a saved list, check the box next to the list name and then click the "Add" button. </span> </div> <div id="multiorgSavedTree" class="ygtv-checkbox"></div> <div class="requiresLogin" style="padding-top:50px"> <span class="requiresNoSavedOrglist requiresLogin"> You have no saved database lists </span> </div> <div class="requiresNotLoggedIn" style="padding-top:50px"> Log in and reload this page to access your saved database lists. </div> </div> </div> <div id="tierKey" style="padding-top:3px"> <span class="tier1">Tier 1</span> and <span class="tier2">Tier 2</span> databases are displayed with orange and blue backgrounds, respectively. </div> </div> <div class='buttons flexCol' style="gap:4px;margin:3px;"> <div id="multiorgSelectAllRow"> <input type="button" id="multiorgSelectAllBtn" class="disableWhenAllSelected" value="Select All" onclick="multiorgSelectAll()"> </div> <input type="button" id="multiorgAddToList" class="disableWhenAllSelected" value="Add →" onclick="addNewSelections()"> <input type="button" id="multiorgDeleteFromList" class="disableWhenAllSelected" value="Remove ←" onclick="deleteMultiorgOptions(false)"> <input type="button" id="multiorgClearAll" value="Clear All" onclick="deleteMultiorgOptions(true)"> <input type="button" id="moveup" value="Up ↑" onclick="moveUpOption()"> <input type="button" id="movedown" value="Down ↓" onclick="moveDownOption()"> </div> <div> <label for="multiorgSelection"><h3>Current Selection</h3></label> <span id="multiNumSelected">0</span> databases or taxa currently selected. <p> <div id='multiorgSelectionDiv'> <select multiple id="multiorgSelection"> </select> </div> <div class="requiresLogin" id="rememberAsST"> <fieldset style="border:none;padding:0"> <legend style="padding-top:3px"> Remember Selection as SmartTable:</legend> <label> <input type="radio" name="stSave" value="new" checked> Create New </label> <label> <input type="radio" name="stSave" value="old"> Update Existing </label> <div style="padding-top:3px"> <input type="text" id="orglistname" style="width:200px" placeholder="Enter SmartTable Name"> <select id="savedOrglistUpdate" class="savedOrglistSelectEl" aria-label="Select an organism SmartTable to update" style="display:none"> </select> <input type="button" value="Save" title="Clicking this button will save or update the specified organism SmartTable to refer to the currently selected databases. It will not close this dialog or submit your choices. If no databases are currently selected, clicking this button will cause the named SmartTable to be deleted. SmartTables saved here can be accessed from the My Lists tab."> </div> </fieldset> </div> <div class="requiresNotLoggedIn" style="padding-top:3px"> Note: if you create a user account and log in, you can save your database lists for next time. </div> </div> </div> </form> </div> </div> <script type="text/javascript"> multiorg_maxOrgs = 70 </script>  <script type="text/javascript"> if (forceOrgID && forceOrgID != "DEFAULT") setOrganism(forceOrgID); </script> <script src="https://unpkg.com/@popperjs/core@2"></script> <script src="https://unpkg.com/tippy.js@6"></script> <script> /* following relates to tooltips for template-top-menubar */ var subTipContent; subTipContent = "You are not connected to a paid subscription, which limits your access to BioCyc. The EcoCyc database is free."; var accelTipContent = "Create a free account and receive one month of free access to BioCyc. Even if your institution already subscribes to BioCyc, you still need to create an account for ongoing access."; if (subTipContent) { tippy('#subscribe', { content: subTipContent, theme: 'biocyc', placement: 'bottom', plugins: [hideOnEsc] }); } tippy('#account', { content: accelTipContent, theme: 'biocyc', placement: 'bottom', plugins: [hideOnEsc] }); /* following relates to tooltip for MetaCyc */ tippy('#metacycRef', { theme: 'biocyc', content: "MetaCyc is a curated database of metabolic enzymes and pathways from all domains of life.", placement: 'right', plugins: [hideOnEsc] }); </script>

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