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(PDF) Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi | Darrin Hulsey - Academia.edu
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For example, even in the face of ongoing gene flow strong" /> <title>(PDF) Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi | Darrin Hulsey - Academia.edu</title> <link rel="canonical" href="https://www.academia.edu/100278894/Population_Genomic_Evidence_Reveals_Subtle_Patterns_of_Differentiation_in_the_Trophically_Polymorphic_Cuatro_Ci%C3%A9negas_Cichlid_Herichthys_minckleyi" /> <script async src="https://www.googletagmanager.com/gtag/js?id=G-5VKX33P2DS"></script> <script> window.dataLayer = window.dataLayer || []; function gtag(){dataLayer.push(arguments);} gtag('js', new Date()); gtag('config', 'G-5VKX33P2DS', { cookie_domain: 'academia.edu', send_page_view: false, }); gtag('event', 'page_view', { 'controller': "single_work", 'action': "show", 'controller_action': 'single_work#show', 'logged_in': 'false', 'edge': 'unknown', // Send nil if there is no A/B test bucket, in case some records get logged // with missing data - that way we can distinguish between the two cases. // ab_test_bucket should be of the form <ab_test_name>:<bucket> 'ab_test_bucket': null, }) </script> <script> var $controller_name = 'single_work'; var $action_name = "show"; var $rails_env = 'production'; var $app_rev = '92477ec68c09d28ae4730a4143c926f074776319'; var $domain = 'academia.edu'; var $app_host = "academia.edu"; var $asset_host = "academia-assets.com"; var $start_time = new Date().getTime(); var $recaptcha_key = "6LdxlRMTAAAAADnu_zyLhLg0YF9uACwz78shpjJB"; var $recaptcha_invisible_key = "6Lf3KHUUAAAAACggoMpmGJdQDtiyrjVlvGJ6BbAj"; var $disableClientRecordHit = false; </script> <script> window.require = { config: function() { return function() {} } } </script> <script> window.Aedu = window.Aedu || {}; window.Aedu.hit_data = null; window.Aedu.serverRenderTime = new Date(1732776715000); window.Aedu.timeDifference = new Date().getTime() - 1732776715000; </script> <script type="application/ld+json">{"@context":"https://schema.org","@type":"ScholarlyArticle","abstract":"In recent decades, an increased understanding of molecular ecology has led to a reinterpretation of the role of gene flow during the evolution of reproductive isolation and biological novelty. For example, even in the face of ongoing gene flow strong selection may maintain divergent polymorphisms, or gene flow may introduce novel biological diversity via hybridization and introgression from a divergent species. Herein, we elucidate the evolutionary history and genomic basis of a trophically polymorphic trait in a species of cichlid fish, Herichthys minckleyi. We explored genetic variation at 3 hierarchical levels; between H. minckleyi (n = 69) and a closely related species Herichthys cyanoguttatus (n = 10), between H. minckleyi individuals from 2 geographic locations, and finally between individuals with alternate morphotypes at both a genome-wide and locus-specific scale. We found limited support for the hypothesis that the H. minckleyi polymorphism is the result of ongoing hybridi...","author":[{"@context":"https://schema.org","@type":"Person","name":"Darrin Hulsey"}],"contributor":[],"dateCreated":"2023-04-16","dateModified":null,"datePublished":"2019-01-01","headline":"Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi","inLanguage":"en","keywords":["Evolutionary Biology","Genetics","Gene Flow","Biology","Medicine","Heredity","Population","Introgression","Reproductive Isolation"],"locationCreated":null,"publication":"Journal of Heredity","publisher":{"@context":"https://schema.org","@type":"Organization","name":"Oxford University Press (OUP)"},"image":null,"thumbnailUrl":null,"url":"https://www.academia.edu/100278894/Population_Genomic_Evidence_Reveals_Subtle_Patterns_of_Differentiation_in_the_Trophically_Polymorphic_Cuatro_Ci%C3%A9negas_Cichlid_Herichthys_minckleyi","sourceOrganization":[{"@context":"https://schema.org","@type":"EducationalOrganization","name":"konstanz"}]}</script><link rel="stylesheet" media="all" href="//a.academia-assets.com/assets/single_work_page/loswp-102fa537001ba4d8dcd921ad9bd56c474abc201906ea4843e7e7efe9dfbf561d.css" /><link rel="stylesheet" media="all" href="//a.academia-assets.com/assets/design_system/body-8d679e925718b5e8e4b18e9a4fab37f7eaa99e43386459376559080ac8f2856a.css" /><link rel="stylesheet" media="all" href="//a.academia-assets.com/assets/design_system/button-3cea6e0ad4715ed965c49bfb15dedfc632787b32ff6d8c3a474182b231146ab7.css" /><link rel="stylesheet" media="all" 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For example, even in the face of ongoing gene flow strong selection may maintain divergent polymorphisms, or gene flow may introduce novel biological diversity via hybridization and introgression from a divergent species. Herein, we elucidate the evolutionary history and genomic basis of a trophically polymorphic trait in a species of cichlid fish, Herichthys minckleyi. We explored genetic variation at 3 hierarchical levels; between H. minckleyi (n = 69) and a closely related species Herichthys cyanoguttatus (n = 10), between H. minckleyi individuals from 2 geographic locations, and finally between individuals with alternate morphotypes at both a genome-wide and locus-specific scale. We found limited support for the hypothesis that the H. minckleyi polymorphism is the result of ongoing hybridi...","publisher":"Oxford University Press (OUP)","publication_date":"2019,,","publication_name":"Journal of Heredity"},"document_type":"paper","pre_hit_view_count_baseline":null,"quality":"high","language":"en","title":"Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi","broadcastable":false,"draft":null,"has_indexable_attachment":true,"indexable":true}}["work"]; window.loswp.workCoauthors = [171988268]; window.loswp.locale = "en"; window.loswp.countryCode = "SG"; window.loswp.cwvAbTestBucket = ""; window.loswp.designVariant = "ds_vanilla"; window.loswp.fullPageMobileSutdModalVariant = "full_page_mobile_sutd_modal"; window.loswp.useOptimizedScribd4genScript = false; window.loswp.appleClientId = 'edu.academia.applesignon';</script><script defer="" src="https://accounts.google.com/gsi/client"></script><div class="ds-loswp-container"><div class="ds-work-card--grid-container"><div class="ds-work-card--container js-loswp-work-card"><div class="ds-work-card--cover"><div class="ds-work-cover--wrapper"><div class="ds-work-cover--container"><button class="ds-work-cover--clickable js-swp-download-button" data-signup-modal="{"location":"swp-splash-paper-cover","attachmentId":101146651,"attachmentType":"pdf"}"><img alt="First page of “Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi”" class="ds-work-cover--cover-thumbnail" src="https://0.academia-photos.com/attachment_thumbnails/101146651/mini_magick20230416-1-ar6k77.png?1681671923" /><img alt="PDF Icon" class="ds-work-cover--file-icon" src="//a.academia-assets.com/assets/single_work_splash/adobe.icon-574afd46eb6b03a77a153a647fb47e30546f9215c0ee6a25df597a779717f9ef.svg" /><div class="ds-work-cover--hover-container"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">download</span><p>Download Free PDF</p></div><div class="ds-work-cover--ribbon-container">Download Free PDF</div><div class="ds-work-cover--ribbon-triangle"></div></button></div></div></div><div class="ds-work-card--work-information"><h1 class="ds-work-card--work-title">Population Genomic Evidence Reveals Subtle Patterns of Differentiation in the Trophically Polymorphic Cuatro Ciénegas Cichlid, Herichthys minckleyi</h1><div class="ds-work-card--work-authors ds-work-card--detail"><a class="ds-work-card--author js-wsj-grid-card-author ds2-5-body-md ds2-5-body-link" data-author-id="171988268" href="https://konstanz.academia.edu/DarrinHulsey"><img alt="Profile image of Darrin Hulsey" class="ds-work-card--author-avatar" src="//a.academia-assets.com/images/s65_no_pic.png" />Darrin Hulsey</a></div><div class="ds-work-card--detail"><p class="ds-work-card--detail ds2-5-body-sm">2019, Journal of Heredity</p><div class="ds-work-card--work-metadata"><div class="ds-work-card--work-metadata__stat"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">visibility</span><p class="ds2-5-body-sm" id="work-metadata-view-count">…</p></div><div class="ds-work-card--work-metadata__stat"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">description</span><p class="ds2-5-body-sm">9 pages</p></div><div class="ds-work-card--work-metadata__stat"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">link</span><p class="ds2-5-body-sm">1 file</p></div></div><script>(async () => { const workId = 100278894; const worksViewsPath = "/v0/works/views?subdomain_param=api&work_ids%5B%5D=100278894"; const getWorkViews = async (workId) => { const response = await fetch(worksViewsPath); if (!response.ok) { throw new Error('Failed to load work views'); } const data = await response.json(); return data.views[workId]; }; // Get the view count for the work - we send this immediately rather than waiting for // the DOM to load, so it can be available as soon as possible (but without holding up // the backend or other resource requests, because it's a bit expensive and not critical). const viewCount = await getWorkViews(workId); const updateViewCount = (viewCount) => { const viewCountNumber = Number(viewCount); if (!viewCountNumber) { throw new Error('Failed to parse view count'); } const commaizedViewCount = viewCountNumber.toLocaleString(); const viewCountBody = document.getElementById('work-metadata-view-count'); if (viewCountBody) { viewCountBody.textContent = `${commaizedViewCount} views`; } else { throw new Error('Failed to find work views element'); } }; // If the DOM is still loading, wait for it to be ready before updating the view count. if (document.readyState === "loading") { document.addEventListener('DOMContentLoaded', () => { updateViewCount(viewCount); }); // Otherwise, just update it immediately. } else { updateViewCount(viewCount); } })();</script></div><p class="ds-work-card--work-abstract ds-work-card--detail ds2-5-body-md">In recent decades, an increased understanding of molecular ecology has led to a reinterpretation of the role of gene flow during the evolution of reproductive isolation and biological novelty. For example, even in the face of ongoing gene flow strong selection may maintain divergent polymorphisms, or gene flow may introduce novel biological diversity via hybridization and introgression from a divergent species. Herein, we elucidate the evolutionary history and genomic basis of a trophically polymorphic trait in a species of cichlid fish, Herichthys minckleyi. We explored genetic variation at 3 hierarchical levels; between H. minckleyi (n = 69) and a closely related species Herichthys cyanoguttatus (n = 10), between H. minckleyi individuals from 2 geographic locations, and finally between individuals with alternate morphotypes at both a genome-wide and locus-specific scale. We found limited support for the hypothesis that the H. minckleyi polymorphism is the result of ongoing hybridi...</p><div class="ds-work-card--button-container"><button class="ds2-5-button js-swp-download-button" data-signup-modal="{"location":"continue-reading-button--work-card","attachmentId":101146651,"attachmentType":"pdf","workUrl":"https://www.academia.edu/100278894/Population_Genomic_Evidence_Reveals_Subtle_Patterns_of_Differentiation_in_the_Trophically_Polymorphic_Cuatro_Ci%C3%A9negas_Cichlid_Herichthys_minckleyi"}">See full PDF</button><button class="ds2-5-button ds2-5-button--secondary js-swp-download-button" data-signup-modal="{"location":"download-pdf-button--work-card","attachmentId":101146651,"attachmentType":"pdf","workUrl":"https://www.academia.edu/100278894/Population_Genomic_Evidence_Reveals_Subtle_Patterns_of_Differentiation_in_the_Trophically_Polymorphic_Cuatro_Ci%C3%A9negas_Cichlid_Herichthys_minckleyi"}"><span class="material-symbols-outlined" style="font-size: 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href="https://www.academia.edu/107969073/Introgressive_hybridization_in_a_trophically_polymorphic_cichlid">Introgressive hybridization in a trophically polymorphic cichlid</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="171988268" href="https://konstanz.academia.edu/DarrinHulsey">Darrin Hulsey</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Ecology and Evolution, 2013</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Introgressive hybridization in a trophically polymorphic cichlid","attachmentId":106481569,"attachmentType":"pdf","work_url":"https://www.academia.edu/107969073/Introgressive_hybridization_in_a_trophically_polymorphic_cichlid","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/107969073/Introgressive_hybridization_in_a_trophically_polymorphic_cichlid"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="1" data-entity-id="14698471" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/14698471/Community_Genetics_Reveal_Elevated_Levels_of_Sympatric_Gene_Flow_among_Morphologically_Similar_but_Not_among_Morphologically_Dissimilar_Species_of_Lake_Victoria_Cichlid_Fish">Community Genetics Reveal Elevated Levels of Sympatric Gene Flow among Morphologically Similar but Not among Morphologically Dissimilar Species of Lake Victoria Cichlid Fish</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="33649473" href="https://independent.academia.edu/MartijnEgas">Martijn Egas</a></div><p class="ds-related-work--metadata ds2-5-body-xs">International Journal of Evolutionary Biology, 2011</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Community Genetics Reveal Elevated Levels of Sympatric Gene Flow among Morphologically Similar but Not among Morphologically Dissimilar Species of Lake Victoria Cichlid Fish","attachmentId":43966561,"attachmentType":"pdf","work_url":"https://www.academia.edu/14698471/Community_Genetics_Reveal_Elevated_Levels_of_Sympatric_Gene_Flow_among_Morphologically_Similar_but_Not_among_Morphologically_Dissimilar_Species_of_Lake_Victoria_Cichlid_Fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/14698471/Community_Genetics_Reveal_Elevated_Levels_of_Sympatric_Gene_Flow_among_Morphologically_Similar_but_Not_among_Morphologically_Dissimilar_Species_of_Lake_Victoria_Cichlid_Fish"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="2" data-entity-id="18886553" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/18886553/Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish">Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="39191901" href="https://independent.academia.edu/SchmidCorinne">Corinne Schmid</a><span>, </span><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">BMC Evolutionary Biology, 2009</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish","attachmentId":40310949,"attachmentType":"pdf","work_url":"https://www.academia.edu/18886553/Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/18886553/Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="3" data-entity-id="69611821" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/69611821/Genomics_of_parallel_ecological_speciation_in_Lake_Victoria_cichlids">Genomics of parallel ecological speciation in Lake Victoria cichlids</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Molecular biology and evolution, 2018</p><p class="ds-related-work--abstract ds2-5-body-sm">The genetic basis of parallel evolution of similar species is of great interest in evolutionary biology. In the adaptive radiation of Lake Victoria cichlid fishes, sister species with either blue or red-back male nuptial coloration have evolved repeatedly, often associated with shallower and deeper water, respectively. One such case are blue and red-backed Pundamilia species, for which we recently showed that a young species pair may have evolved through &quot;hybrid parallel speciation&quot;. Coalescent simulations suggested that the older species P. pundamilia (blue) and P. nyererei (red-back) admixed in the Mwanza Gulf and that new &quot;nyererei-like&quot; and &quot;pundamilia-like&quot; species evolved from the admixed population. Here, we use genome scans to study the genomic architecture of differentiation, and assess the influence of hybridization on the evolution of the younger species pair. For each of the two species pairs, we find over 300 genomic regions, widespread acr...</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Genomics of parallel ecological speciation in Lake Victoria cichlids","attachmentId":79640142,"attachmentType":"pdf","work_url":"https://www.academia.edu/69611821/Genomics_of_parallel_ecological_speciation_in_Lake_Victoria_cichlids","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/69611821/Genomics_of_parallel_ecological_speciation_in_Lake_Victoria_cichlids"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="4" data-entity-id="28293221" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/28293221/Genetic_linkage_of_distinct_adaptive_traits_in_sympatrically_speciating_crater_lake_cichlid_fish">Genetic linkage of distinct adaptive traits in sympatrically speciating crater lake cichlid fish</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="25663965" href="https://muni.academia.edu/VieraKovacova">Viera Kovacova</a><span>, </span><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="8742" href="https://qut.academia.edu/CarmeloFruciano">Carmelo Fruciano</a></div><p class="ds-related-work--abstract ds2-5-body-sm">Our understanding of how biological diversity arises is limited, especially in the case of speciation in the face of gene flow. Here we investigate the genomic basis of adaptive traits, focusing on a sympatrically diverging species pair of crater lake cichlid fishes. We identify the main quantitative trait loci (QTL) for two eco-morphological traits: body shape and phar-yngeal jaw morphology. These traits diverge in parallel between benthic and limnetic species in the repeated adaptive radiations of this and other fish lineages. Remarkably, a single chromosomal region contains the highest effect size QTL for both traits. Transcriptomic data show that the QTL regions contain genes putatively under selection. Independent population genomic data corroborate QTL regions as areas of high differentiation between the sympatric sister species. Our results provide empirical support for current theoretical models that emphasize the importance of genetic linkage and pleiotropy in facilitating rapid divergence in sympatry.</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Genetic linkage of distinct adaptive traits in sympatrically speciating crater lake cichlid fish","attachmentId":48625053,"attachmentType":"pdf","work_url":"https://www.academia.edu/28293221/Genetic_linkage_of_distinct_adaptive_traits_in_sympatrically_speciating_crater_lake_cichlid_fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/28293221/Genetic_linkage_of_distinct_adaptive_traits_in_sympatrically_speciating_crater_lake_cichlid_fish"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="5" data-entity-id="69611805" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/69611805/Evolutionary_divergence_in_replicate_pairs_of_ecotypes_of_Lake_Victoria_cichlid_fish">Evolutionary divergence in replicate pairs of ecotypes of Lake Victoria cichlid fish</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Evolutionary Ecology Research, 2012</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Evolutionary divergence in replicate pairs of ecotypes of Lake Victoria cichlid fish","attachmentId":79640126,"attachmentType":"pdf","work_url":"https://www.academia.edu/69611805/Evolutionary_divergence_in_replicate_pairs_of_ecotypes_of_Lake_Victoria_cichlid_fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/69611805/Evolutionary_divergence_in_replicate_pairs_of_ecotypes_of_Lake_Victoria_cichlid_fish"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="6" data-entity-id="18886715" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/18886715/Population_genomic_signatures_of_divergent_adaptation_gene_flow_and_hybrid_speciation_in_the_rapid_radiation_of_Lake_Victoria_cichlid_fishes">Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Molecular Ecology, 2013</p><div class="ds-related-work--ctas"><button 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class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="7" data-entity-id="111466787" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/111466787/Demographic_modelling_with_whole_genome_data_reveals_parallel_origin_of_similar_i_Pundamilia_i_cichlid_species_after_hybridization">Demographic modelling with whole-genome data reveals parallel origin of similar<i>Pundamilia</i>cichlid species after hybridization</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Molecular Ecology, 2016</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Demographic modelling with whole-genome data reveals parallel origin of similar\u003ci\u003ePundamilia\u003c/i\u003ecichlid species after hybridization","attachmentId":108998464,"attachmentType":"pdf","work_url":"https://www.academia.edu/111466787/Demographic_modelling_with_whole_genome_data_reveals_parallel_origin_of_similar_i_Pundamilia_i_cichlid_species_after_hybridization","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/111466787/Demographic_modelling_with_whole_genome_data_reveals_parallel_origin_of_similar_i_Pundamilia_i_cichlid_species_after_hybridization"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="8" data-entity-id="44950705" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/44950705/Ontogenetic_divergence_generates_novel_phenotypes_in_hybrid_cichlids">Ontogenetic divergence generates novel phenotypes in hybrid cichlids</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="8300075" href="https://csic.academia.edu/JavierHSantosSantos">Javier H . Santos-Santos</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Journal of Anatomy, 2021</p><p class="ds-related-work--abstract ds2-5-body-sm">Hybridization is suggested to contribute to ecomorphological and taxonomic diversity in lacustrine East African cichlids. This is supported by studies demonstrating that genetic diversity within lake radiations has been influenced by hybridization events, leading to extensive phenotypic differentiation of genetically closely related species. Hybrid persistence and speciation in sympatry with gene flow can be explained by pleiotropy in traits involved in reproductive isolation; however, little attention has been given to how trait differentiation is established during hybrid ontogeny, and how this may relate to trophic and locomotor specialization. This study compares body shape changes in a Lake Victoria cichlid hybrid throughout its post-hatch ontogeny to those of its parental species. Across the considered age/size categories, hybrids occupy a distinct and intermediate morphological space, yet where several transgressive traits emerge. A between-group principal component analysis on body shapes across size categories reveals axes of shape variation exclusive to the hybrids in the youngest/ smallest size categories. Shape differences in the hybrids involved morphological traits known to be implicated in trophic and locomotor specializations in the parental species. Combined, our findings suggest that phenotypic divergence in the hybrid can lead to functional differences that may potentially release them to some degree from competition with the parental species. These findings agree with recent literature that addresses the potential importance of hybridization for the unusually recent origin of the Lake Victoria cichlid super-species flock.</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Ontogenetic divergence generates novel phenotypes in hybrid cichlids","attachmentId":65480985,"attachmentType":"pdf","work_url":"https://www.academia.edu/44950705/Ontogenetic_divergence_generates_novel_phenotypes_in_hybrid_cichlids","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/44950705/Ontogenetic_divergence_generates_novel_phenotypes_in_hybrid_cichlids"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-wsj-grid-card" data-collection-position="9" data-entity-id="30069410" data-sort-order="default"><a class="ds-related-work--title js-wsj-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/30069410/BMC_Evolutionary_Biology_Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish">BMC Evolutionary Biology Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish</a><div class="ds-related-work--metadata"><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="2323640" href="https://independent.academia.edu/OliverSelz">Oliver Selz</a><span>, </span><a class="js-wsj-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--abstract ds2-5-body-sm">Background: Transgressive segregation describes the occurrence of novel phenotypes in hybrids with extreme trait values not observed in either parental species. A previously experimentally untested prediction is that the amount of transgression increases with the genetic distance between hybridizing species. This follows from QTL studies suggesting that transgression is most commonly due to complementary gene action or epistasis, which become more frequent at larger genetic distances. This is because the number of QTLs fixed for alleles with opposing signs in different species should increase with time since speciation provided that speciation is not driven by disruptive selection. We measured the amount of transgression occurring in hybrids of cichlid fish bred from species pairs with gradually increasing genetic distances and varying phenotypic similarity. Transgression in multi-trait shape phenotypes was quantified using landmark-based geometric morphometric methods.</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"BMC Evolutionary Biology Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish","attachmentId":50518521,"attachmentType":"pdf","work_url":"https://www.academia.edu/30069410/BMC_Evolutionary_Biology_Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-wsj-grid-card-view-pdf" href="https://www.academia.edu/30069410/BMC_Evolutionary_Biology_Phenotypic_novelty_in_experimental_hybrids_is_predicted_by_the_genetic_distance_between_species_of_cichlid_fish"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div></div></div><div class="ds-sticky-ctas--wrapper js-loswp-sticky-ctas hidden"><div class="ds-sticky-ctas--grid-container"><div class="ds-sticky-ctas--container"><button class="ds2-5-button js-swp-download-button" data-signup-modal="{"location":"continue-reading-button--sticky-ctas","attachmentId":101146651,"attachmentType":"pdf","workUrl":null}">See full PDF</button><button class="ds2-5-button ds2-5-button--secondary js-swp-download-button" data-signup-modal="{"location":"download-pdf-button--sticky-ctas","attachmentId":101146651,"attachmentType":"pdf","workUrl":null}"><span class="material-symbols-outlined" style="font-size: 20px" translate="no">download</span>Download PDF</button></div></div></div><div class="ds-below-fold--grid-container"><div class="ds-work--container js-loswp-embedded-document"><div class="attachment_preview" data-attachment="Attachment_101146651" style="display: none"><div class="js-scribd-document-container"><div class="scribd--document-loading js-scribd-document-loader" style="display: block;"><img alt="Loading..." src="//a.academia-assets.com/images/loaders/paper-load.gif" /><p>Loading Preview</p></div></div><div style="text-align: center;"><div class="scribd--no-preview-alert js-preview-unavailable"><p>Sorry, preview is currently unavailable. You can download the paper by clicking the button above.</p></div></div></div></div><div class="ds-sidebar--container js-work-sidebar"><div class="ds-related-content--container"><h2 class="ds-related-content--heading">Related papers</h2><div class="ds-related-work--container js-related-work-sidebar-card" data-collection-position="0" data-entity-id="13219857" data-sort-order="default"><a class="ds-related-work--title js-related-work-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/13219857/CONTRASTING_PATTERNS_OF_SPATIAL_GENETIC_STRUCTURE_IN_SYMPATRIC_ROCK_DWELLING_CICHLID_FISHES">CONTRASTING PATTERNS OF SPATIAL GENETIC STRUCTURE IN SYMPATRIC ROCK-DWELLING CICHLID FISHES</a><div class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="32472659" href="https://independent.academia.edu/AmyMcCune">Amy McCune</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Evolution, 2009</p><div 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js-related-work-sidebar-card" data-collection-position="2" data-entity-id="120317243" data-sort-order="default"><a class="ds-related-work--title js-related-work-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/120317243/Interspecific_hybridization_can_generate_functional_novelty_in_cichlid_fish">Interspecific hybridization can generate functional novelty in cichlid fish</a><div class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Proceedings of The Royal Society B: Biological Sciences, 2019</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Interspecific hybridization can generate functional novelty in cichlid 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href="https://www.academia.edu/30070394/Effects_of_interspecific_gene_flow_on_the_phenotypic_variance_covariance_matrix_in_Lake_Victoria_Cichlids">Effects of interspecific gene flow on the phenotypic variance–covariance matrix in Lake Victoria Cichlids</a><div class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="2323640" href="https://independent.academia.edu/OliverSelz">Oliver Selz</a><span>, </span><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Effects of interspecific gene flow on the phenotypic variance–covariance matrix in Lake Victoria Cichlids","attachmentId":50519344,"attachmentType":"pdf","work_url":"https://www.academia.edu/30070394/Effects_of_interspecific_gene_flow_on_the_phenotypic_variance_covariance_matrix_in_Lake_Victoria_Cichlids","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-related-work-grid-card-view-pdf" href="https://www.academia.edu/30070394/Effects_of_interspecific_gene_flow_on_the_phenotypic_variance_covariance_matrix_in_Lake_Victoria_Cichlids"><span class="ds2-5-text-link__content">View PDF</span><span class="material-symbols-outlined" style="font-size: 18px" translate="no">chevron_right</span></a></div></div><div class="ds-related-work--container js-related-work-sidebar-card" data-collection-position="4" data-entity-id="3152133" data-sort-order="default"><a class="ds-related-work--title js-related-work-grid-card-title ds2-5-body-md ds2-5-body-link" href="https://www.academia.edu/3152133/Unusually_fine_scale_genetic_structuring_found_in_rapidly_speciating_Malawi_cichlid_fishes">Unusually fine-scale genetic structuring found in rapidly speciating Malawi cichlid fishes</a><div class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="3603589" href="https://csic.academia.edu/CiroRico">Ciro Rico</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Proceedings of The Royal Society of London. Series B, Biological Sciences (1934-1990), 1997</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Unusually fine-scale genetic structuring found in rapidly speciating Malawi cichlid fishes","attachmentId":50435218,"attachmentType":"pdf","work_url":"https://www.academia.edu/3152133/Unusually_fine_scale_genetic_structuring_found_in_rapidly_speciating_Malawi_cichlid_fishes","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-related-work-grid-card-view-pdf" href="https://www.academia.edu/3152133/Unusually_fine_scale_genetic_structuring_found_in_rapidly_speciating_Malawi_cichlid_fishes"><span class="ds2-5-text-link__content">View PDF</span><span 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fish</a><div class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="7541539" href="https://independent.academia.edu/oleseehausen">ole seehausen</a></div><p class="ds-related-work--metadata ds2-5-body-xs">Journal of Evolutionary Biology, 2008</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Divergent selection and phenotypic plasticity during incipient speciation in Lake Victoria cichlid fish","attachmentId":115507561,"attachmentType":"pdf","work_url":"https://www.academia.edu/120317255/Divergent_selection_and_phenotypic_plasticity_during_incipient_speciation_in_Lake_Victoria_cichlid_fish","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free 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class="ds-related-work--metadata"><a class="js-related-work-grid-card-author ds2-5-body-sm ds2-5-body-link" data-author-id="39280020" href="https://independent.academia.edu/MartaBarluenga">Marta Barluenga</a></div><p class="ds-related-work--metadata ds2-5-body-xs">BMC EVOLUTIONARY BIOLOGY, 2007</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Sampling genetic diversity in the sympatrically and allopatrically speciating Midas cichlid species complex over a 16 year time series","attachmentId":40429853,"attachmentType":"pdf","work_url":"https://www.academia.edu/19097773/Sampling_genetic_diversity_in_the_sympatrically_and_allopatrically_speciating_Midas_cichlid_species_complex_over_a_16_year_time_series","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span 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class="ds-related-work--metadata ds2-5-body-xs">Journal of Evolutionary Biology, 2010</p><div class="ds-related-work--ctas"><button class="ds2-5-text-link ds2-5-text-link--inline js-swp-download-button" data-signup-modal="{"location":"wsj-grid-card-download-pdf-modal","work_title":"Environmental variation, hybridization, and phenotypic diversification in Cuatro Ciénegas pupfishes","attachmentId":45214267,"attachmentType":"pdf","work_url":"https://www.academia.edu/13561158/Environmental_variation_hybridization_and_phenotypic_diversification_in_Cuatro_Ci%C3%A9negas_pupfishes","alternativeTracking":true}"><span class="material-symbols-outlined" style="font-size: 18px" translate="no">download</span><span class="ds2-5-text-link__content">Download free PDF</span></button><a class="ds2-5-text-link ds2-5-text-link--inline js-related-work-grid-card-view-pdf" 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