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MacDonald </a> <span> <i class="ui muted bolt icon"></i> 68k </span> <div class="muted" style=""> The short answer is yes. When you compute pseudo-bulk estimates, the counts/gene are expected to be somewhat proportional to the number of … </div> </div> <div class="item spaced"> <a href="/p/9161352/"> Comment: displaying the differential expression with deseq2 over 4X2 samples with the in</a> by <a href="/u/79619/">Leonard </a> <span> • 0 </span> <div class="muted" style=""> Visualize subject contributions to overall differential expression using: Volcano plots/scatter plots (subject-colored). Heatmaps (subject… </div> </div> <div class="item spaced"> <a href="/p/9161350/"> Comment: Plot title for PCA in DESeq2</a> by <a href="/u/78232/">AL </a> <span> • 0 </span> <div class="muted" style=""> Thank you! </div> </div> <div class="item spaced"> <a href="/p/9161349/"> Answer: Interpreting DESEQ2 interaction term and inclusion of covariate</a> by <a href="/u/14086/">swbarnes2 </a> <span> ★ 1.4k </span> <div class="muted" style=""> "ecotypehigh.rearing_high" will basically do a 4 group comparison, and tell you if any genes that change going from high to low change diff… </div> </div> <div class="item spaced"> <a href="/p/9161348/"> Comment: error in ChAMP loading file</a> by <a href="/u/77610/">Ashley </a> <span> • 0 </span> <div class="muted" style=""> This error in ChAMP loading file and the solutions provided here are good and there are people who need these solutions. 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