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MacDonald</span> </a> <i class="ui muted bolt icon"></i> 68k • written 21 months ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/64663/"> <span itemprop="name">a26fd14e</span> </a> • 0 </div> </div> </div> </div> <div class="post open item" data-value="9150900"> <div class="stats"> <div class="ui mini stat left label"> <div>3</div> <div>votes</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>5</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.4k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/9150900/"> calculate distance to a certain sequence in one gene </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/SummarizedExperiment/"> SummarizedExperiment </a> <a class="ptag" href="/tag/Genetics/"> Genetics </a> </div> <div class="right floated muted"> updated 23 months ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/5106/"> <span itemprop="name">James W. MacDonald</span> </a> <i class="ui muted bolt icon"></i> 68k • written 23 months ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/49938/"> <span itemprop="name">Marcus</span> </a> • 0 </div> </div> </div> </div> <div class="post open item" data-value="9146557"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.2k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/9146557/"> Postdoctoral research scientist in computational biology/statistical genetics/functional genomics at Columbia University, USA </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/Alzheimer's/"> Alzheimer's </a> <a class="ptag" href="/tag/StatisticalMethod/"> StatisticalMethod </a> <a class="ptag" href="/tag/Genetics/"> Genetics </a> <a class="ptag" href="/tag/molecularQTL/"> molecularQTL </a> <a class="ptag" href="/tag/FunctionalGenomics/"> FunctionalGenomics </a> </div> <div class="right floated muted"> <span> 2.5 years ago <a href="/u/54069/"> gaow </a> • 0 </span> </div> </div> </div> </div> <div class="post open item" data-value="p134049"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.2k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/p134049/"> Scientist/Senior Scientist, Statistical Geneticist </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/Sequencing/"> Sequencing </a> <a class="ptag" href="/tag/Genetics/"> Genetics </a> <a class="ptag" href="/tag/GeneticsPed/"> GeneticsPed </a> <a class="ptag" href="/tag/statistics/"> statistics </a> </div> <div class="right floated muted"> <span> 4.2 years ago <a href="/u/5182/"> António Miguel de Jesus Domingues </a> ▴ 510 </span> </div> </div> </div> </div> <div class="post open item" data-value="134799"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.4k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/134799/"> R programmer position in genetic epidemiology/bioconductor </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/genomics/"> genomics </a> <a class="ptag" href="/tag/software/"> software </a> <a class="ptag" href="/tag/Job/"> Job </a> </div> <div class="right floated muted"> <span> 4.5 years ago <a href="/u/4/"> Vincent J. 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Carey, Jr. </a> <i class="ui muted bolt icon"></i> 6.7k </span> </div> </div> </div> </div> <div class="post open item" data-value="110860"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>2.1k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/110860/"> Postdoc and PhD student in Bioinformatics/Biostatistics </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/genomics/"> genomics </a> <a class="ptag" href="/tag/NGS/"> NGS </a> <a class="ptag" href="/tag/R/"> R </a> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/statistics/"> statistics </a> </div> <div class="right floated muted"> <span> 6.7 years ago • updated 4.4 years ago <a href="/u/1783/"> Luo Weijun </a> ★ 1.6k </span> </div> </div> </div> </div> <div class="post open item" data-value="132211"> <div class="stats"> <div class="ui mini stat left label"> <div>4</div> <div>votes</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>6</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.6k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/132211/"> Extremely big genes in annotation TxDb packages </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/annotation/"> annotation </a> <a class="ptag" href="/tag/txdb/"> txdb </a> <a class="ptag" href="/tag/AnnotationData/"> AnnotationData </a> <a class="ptag" href="/tag/Genetics/"> Genetics </a> </div> <div class="right floated muted"> updated 4.8 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/5106/"> <span itemprop="name">James W. MacDonald</span> </a> <i class="ui muted bolt icon"></i> 68k • written 4.8 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/20929/"> <span itemprop="name">epibio</span> </a> ▴ 10 </div> </div> </div> </div> <div class="post open item" data-value="118430"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>1</div> <div>reply</div> </div> <div class="ui label basic transparent stat mini"> <div>1.5k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/118430/"> DiffBind - Counting reads - counts not found </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/diffbind/"> diffbind </a> <a class="ptag" href="/tag/differential%20analysis/"> differential analysis </a> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/%23chip-seq/"> #chip-seq </a> </div> <div class="right floated muted"> updated 6.1 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/5741/"> <span itemprop="name">Rory Stark</span> </a> ★ 5.2k • written 6.1 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/20027/"> <span itemprop="name">ryclb22</span> </a> • 0 </div> </div> </div> </div> <div class="post open item" data-value="118231"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.2k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/118231/"> Computational Biology / Genomics Internship at Denali Therapeutics </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/internship/"> internship </a> <a class="ptag" href="/tag/genomics/"> genomics </a> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/Job/"> Job </a> </div> <div class="right floated muted"> <span> 6.1 years ago <a href="/u/2771/"> Steve Lianoglou </a> ★ 13k </span> </div> </div> </div> </div> <div class="post open item" data-value="117128"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini question open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>1.0k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/117128/"> package for mismatch distribution? </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/statistics/"> statistics </a> </div> <div class="right floated 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</a> ▴ 10 </span> </div> </div> </div> </div> <div class="post open item" data-value="113973"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>1</div> <div>reply</div> </div> <div class="ui label basic transparent stat mini"> <div>1.3k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/113973/"> Normalization and Quality Control for Multiple scRNAseq Data Sets </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/normalization/"> normalization </a> <a class="ptag" href="/tag/rnaseq/"> rnaseq </a> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/batch%20effect/"> batch effect </a> <a class="ptag" href="/tag/dropout/"> dropout </a> </div> <div class="right floated muted"> updated 6.5 years ago by <a itemprop="author" itemscope 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written 10.0 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/7534/"> <span itemprop="name">pankajnarula84</span> </a> ▴ 20 </div> </div> </div> </div> <div class="post open item" data-value="65488"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini job open bookmark"> <div>0</div> <div>replies</div> </div> <div class="ui label basic transparent stat mini"> <div>2.4k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> Job: <a href="/p/65488/"> Abbvie -- Senior Manager/Associate Director, Exploratory Statistics </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/genomics/"> genomics </a> <a class="ptag" href="/tag/genetics/"> genetics </a> <a class="ptag" href="/tag/proteomics/"> proteomics </a> <a class="ptag" href="/tag/rnaseq/"> rnaseq </a> <a class="ptag" href="/tag/microarray/"> microarray </a> <a class="ptag" href="/tag/Job/"> Job </a> </div> <div class="right floated muted"> <span> 10.1 years ago <a href="/u/7440/"> Feng Hong </a> • 0 </span> </div> </div> </div> </div> <div class="post open item" data-value="60510"> <div class="stats"> <div class="ui mini stat left label"> <div>0</div> <div>votes</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>1</div> <div>reply</div> </div> <div class="ui label basic transparent stat mini"> <div>4.0k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/60510/"> DESeq2 - factor base level changes the DE genes. </a> </div> <div class="extra right floated"> <div class="left floated"> <a class="ptag" href="/tag/%20RNASeq/"> RNASeq </a> <a class="ptag" href="/tag/%20Genetics/"> Genetics </a> <a class="ptag" href="/tag/%20DESeq2/"> DESeq2 </a> <a class="ptag" href="/tag/%20RNASeq/"> RNASeq </a> <a class="ptag" href="/tag/%20Genetics/"> Genetics </a> <a class="ptag" href="/tag/%20DESeq2/"> DESeq2 </a> </div> <div class="right floated muted"> updated 10.4 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/5822/"> <span itemprop="name">Michael Love</span> </a> <i class="ui muted bolt icon"></i> 43k • written 10.7 years ago by <a itemprop="author" itemscope itemtype="https://schema.org/Person" href="/u/4897/"> <span itemprop="name">Guest User</span> </a> ★ 13k </div> </div> </div> </div> <div class="post open item" data-value="60801"> <div class="stats"> <div class="ui mini stat left label"> <div>1</div> <div>vote</div> </div> <div class="ui label stat mini question has_answers open bookmark"> <div>1</div> <div>reply</div> </div> <div class="ui label basic transparent stat mini"> <div>2.1k</div> <div>views</div> </div> </div> <div class="content"> <div class="title mini header"> <a href="/p/60801/"> Question about decideTestsDGE() </a> </div> <div class="extra right floated"> <div 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Dataset. Unable to decrement reference count. ``` > traceback() 5: H5Dclose(h5dataset) 4: rhd… </div> </div> <div class="item spaced"> <a href="/p/9161626/"> Comment: DESeq2 model - How to test case/control time course model when taking account wi</a> by <a href="/u/14433/">wuwenhui2 </a> <span> • 0 </span> <div class="muted" style=""> Thanks, I figured it out. </div> </div> <div class="item spaced"> <a href="/p/9161625/"> Comment: Design Matrix with paired and independent samples plus RUVg Spike-in normalizati</a> by <a href="/u/79787/">Mei </a> <span> • 0 </span> <div class="muted" style=""> I have a similar experiment with 7 paired samples (T0 and T1) in each of 4 outcome groups. I am using RUVr combined with limma-voom, so I a… </div> </div> <div class="item spaced"> <a href="/p/9161624/"> Comment: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran</a> by <a href="/u/22506/">Arctic </a> <span> • 0 </span> <div class="muted" style=""> Many thanks for the link to the C++ code. 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