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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head><script type="text/javascript" src="/_static/js/bundle-playback.js?v=HxkREWBo" charset="utf-8"></script> <script type="text/javascript" src="/_static/js/wombat.js?v=txqj7nKC" charset="utf-8"></script> <script>window.RufflePlayer=window.RufflePlayer||{};window.RufflePlayer.config={"autoplay":"on","unmuteOverlay":"hidden"};</script> <script type="text/javascript" src="/_static/js/ruffle/ruffle.js"></script> <script type="text/javascript"> __wm.init("https://web.archive.org/web"); __wm.wombat("http://membranome.org:80/download.php","20180716192828","https://web.archive.org/","web","/_static/", "1531769308"); </script> <link rel="stylesheet" type="text/css" href="/_static/css/banner-styles.css?v=S1zqJCYt" /> <link rel="stylesheet" type="text/css" href="/_static/css/iconochive.css?v=3PDvdIFv" />  <title>Download Membranome Files - Membranome database</title> <link rel="stylesheet" href="/web/20180716192828cs_/http://membranome.org/style.css" type="text/css" media="screen"/> <link rel="stylesheet" href="/web/20180716192828cs_/http://membranome.org/styleprint.css" type="text/css" media="print"/> <link rel="stylesheet" href="/web/20180716192828cs_/http://membranome.org/glmol_css.css" type="text/css"/> <meta http-equiv="content-type" content="application/xhtml+xml; charset=utf-8"/> <meta name="robots" content="all"/> <meta name="author" content="Mikhail Lomize"/> <meta name="keywords" content="OPM, orientation, protein, membrane, localization, delta, Gibbs, transfer, topology, thickness, tilt, angle, subunit"/> <script language="JavaScript" src="/web/20180716192828js_/http://membranome.org/tooltip.js" type="text/javascript"></script> <script language="JavaScript" src="/web/20180716192828js_/http://membranome.org/chime_tooltip.js" type="text/javascript"></script> </head> <body> <div id="TipLayer" style="visibility:hidden;position:absolute;z-index:1000;top:0;"></div> <script language="JavaScript" type="text/javascript">  </script>   <div id="top"> <div id="logo"></div> <div style="position:absolute; top: 5px; right: 5px;"> <div align="right" id="globallinks"> <a href="https://web.archive.org/web/20180716192828/http://www.umich.edu/">UNIVERSITY OF MICHIGAN</a> | <a href="https://web.archive.org/web/20180716192828/http://www.umich.edu/~pharmacy/">COLLEGE OF PHARMACY</a> </div> <div id="simplesearch"> <form id="searchform" method="get" action="search.php"> <input type="text" name="search" id="search" size="20" value="" maxlength="30"/> <input type="submit" value="Search Membranome"/> </form> </div> </div> </div>   <div id="head"> <ul id="globalnav"> <li><a href="./">HOME</a></li> <li><a href="about.php">ABOUT Membranome</a></li> <li><a href="server.php">FMAP SERVER</a></li> <li><a href="tm_server.php">TMDOCK SERVER</a></li> <li><a href="download.php">DOWNLOAD FILES</a></li> <li><a href="contact.php">CONTACT US</a></li> </ul> </div>   <div id="navigation"> <ul class="titlelist"> <li>Protein Classification</li> </ul> <ul id="navlist"> <li><a href="types.php"><b>Types</b> (1 types)</a></li> <li><a href="classes.php"><b>Classes</b> (15 classes)</a></li> <li><a href="superfamilies.php"><b>Superfamilies</b> (689 superfamilies)</a></li> <li><a href="families.php"><b>Families</b> (1408 families)</a></li> <li><a href="species.php"><b>Species</b> (6 species)</a></li> <li><a href="localization.php"><b>Localization</b> (22 types)</a></li> <li><a href="proteins.php"><b>Proteins</b> (6039 entries)</a></li> </ul> <ul class="titlelist"> <li>Protein Complexes</li> </ul> <ul id="navlist"> <li><a href="complex_classes.php"><b>Classes</b> (12 classes)</a></li> <li><a href="complex_families.php"><b>Families</b> (128 families)</a></li> <li><a href="complex_localization.php"><b>Localization</b> (22 types)</a></li> <li><a href="complexes.php"><b>Complexes</b> (445 entries)</a></li> </ul> <br/> <ul class="titlelist"> <li>Species Selection</li> </ul> <form method="post" action="speciesselect.php"> <center> <select name="speciesselect" style="font-size:12px;"> <option value="all" selected="selected">All</option> <option value="Homo sapiens" label="Homo sapiens">Homo sapiens</option> <option value="Methanococcus jannaschii" label="Methanococcus jannaschii">Methanococcus jannaschii</option> <option value="Escherichia coli" label="Escherichia coli">Escherichia coli</option> <option value="Saccharomyces cerevisiae" label="Saccharomyces cerevisiae">Saccharomyces cerevisiae</option> <option value="Dictyostelium discoideum" label="Dictyostelium discoideum">Dictyostelium discoideum</option> <option value="Arabidopsis thaliana" label="Arabidopsis thaliana">Arabidopsis thaliana</option> </select><br> <input type="submit" value="Select Species"/>  </form> </center> <center> <a href="server.php" style="border-bottom:0px; background:none;"><img src="/web/20180716192828im_/http://membranome.org/images/FMAPserver.jpg" alt="FMAP Server" style="margin-top:15px;" border="0"></a> <a href="tm_server.php" style="border-bottom:0px; background:none;"><img src="/web/20180716192828im_/http://membranome.org/images/TMDOCKserver.jpg" alt="TMDOCK Server" style="margin-top:15px;" border="0"></a> </center> </div>  <div id="body"> <h1>Download Membranome Files</h1> <a href="alpha_bitopic.tar">PDB files of TM alpha-helices and homodimers, v.2.0</a> <br/> <a href="membranome2.sql">Membranome database (.sql), v.2.0</a> <br/> <a href="Homodimers_05_2017.xlsx"> Table of homodimer (model #1) parameters (.xlsx), v.2.0</a> <br/><br/> <a href="membranome.sql">Membranome database (.sql), v.1.0</a> <br/> <a href="membranome.txt">Membranome database (.txt), v.1.0</a> <br/><br/> <a href="protein.txt"> Table of proteins (.txt), v.1.0</a> <br/> <a href="superfamily.txt">Table of protein superfamilies (.txt)</a> <br/> <a href="family.txt">Table of protein families (.txt)</a> <br/> <a href="complex.txt">Table of protein complexes (.txt)</a> <br/><br/> <a href="all.txt">List of all proteins (.txt), v.1.0</a> <br/> <a href="meth.txt">List of proteins from Methanococcus (.txt)</a> <br/> <a href="ecoli.txt">List of proteins from E.coli (.txt)</a> <br/> <a href="yeast.txt">List of proteins from Yeast (.txt)</a> <br/> <a href="dicty.txt">List of proteins from Dictyostelium (.txt)</a> <br/> <a href="arab.txt">List of proteins from Arabidopsis (.txt)</a> <br/> <a href="human.txt">List of proteins from Homo sapiens (.txt)</a> </div>   <div id="foot"> Copyright © 2015 <a href="https://web.archive.org/web/20180716192828/mailto:almz@umich.edu">Andrei Lomize</a>, <a href="https://web.archive.org/web/20180716192828/mailto:mlomize@umich.edu">Mikhail Lomize</a> and <a href="https://web.archive.org/web/20180716192828/mailto:irinap@umich.edu">Irina Pogozheva</a> <br/>University of Michigan, Ann Arbor, MI 48109 USA <br/><a href="https://web.archive.org/web/20180716192828/http://validator.w3.org/check?uri=http://membranome.org/download.php" target="_blank" class="nounderline"><img src="/web/20180716192828im_/http://membranome.org/images/xhtml_valid.gif" alt="Valid XHTML" border="0"/></a> <a href="https://web.archive.org/web/20180716192828/http://jigsaw.w3.org/css-validator/validator?uri=http://membranome.org/download.php" target="_blank" class="nounderline"><img src="/web/20180716192828im_/http://membranome.org/images/css_valid.gif" alt="Valid CSS" border="0"/></a> </div>   <script type="text/javascript">  </script> <script type="text/javascript" src="https://web.archive.org/web/20180716192828js_/http://www.statcounter.com/counter/counter_xhtml.js"></script><noscript><div class="statcounter"><a class="statcounter" href="https://web.archive.org/web/20180716192828/http://www.statcounter.com/"><img class="statcounter" src="https://web.archive.org/web/20180716192828im_/http://c10.statcounter.com/counter.php?sc_project=8965471&java=0&security=98ea1ce7&invisible=0" alt="website hit counter"/></a></div></noscript>  </body> </html>