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BG - Interactive review process

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Must have class pswp. --> <div class="pswp" tabindex="-1" role="dialog" aria-hidden="true" > <!-- Background of PhotoSwipe. It's a separate element as animating opacity is faster than rgba(). --> <div class="pswp__bg"></div> <!-- Slides wrapper with overflow:hidden. --> <div class="pswp__scroll-wrap"> <!-- Container that holds slides. PhotoSwipe keeps only 3 of them in the DOM to save memory. Don't modify these 3 pswp__item elements, data is added later on. --> <div class="pswp__container"> <div class="pswp__item"></div> <div class="pswp__item"></div> <div class="pswp__item"></div> </div> <!-- Default (PhotoSwipeUI_Default) interface on top of sliding area. Can be changed. --> <div class="pswp__ui pswp__ui--hidden"> <div class="pswp__top-bar"> <!-- Controls are self-explanatory. Order can be changed. --> <div class="pswp__counter"></div> <button class="pswp__button pswp__button--close" title="Close (Esc)"></button> <button class="pswp__button pswp__button--fs" title="Toggle fullscreen"></button> <!-- Preloader demo http://codepen.io/dimsemenov/pen/yyBWoR --> <!-- element will get class pswp__preloader--active when preloader is running --> <div class="pswp__preloader"> <div class="pswp__preloader__icn"> <div class="pswp__preloader__cut"> <div class="pswp__preloader__donut"></div> </div> </div> </div> </div> <div class="pswp__share-modal pswp__share-modal--hidden pswp__single-tap"> <div class="pswp__share-tooltip"></div> </div> <button class="pswp__button pswp__button--arrow--left" title="Previous (arrow left)"> </button> <button class="pswp__button pswp__button--arrow--right" title="Next (arrow right)"> </button> <div class="pswp__caption "> <div class="pswp__caption__center"></div> </div> </div> </div> </div> <div class="row align-items-center no-gutters py-1" id="search-wrapper"> <div class="col-auto pl-0 pr-1"> <a id="templateSearchInfoBtn" role="button" tabindex="99" data-container="body" data-toggle="popover" data-placement="bottom" data-trigger="click"><span class="fal fa-info-circle"></span></a> </div> <div class="col pl-0 pr-1"> <input type="search" placeholder="Search" name="q" class="form-control form-control-sm" id="search_query_solr"/> </div> <div class="col-auto pl-0"> <button title="Start site search" id="start_site_search_solr" class="btn btn-sm btn-success"><span class="co-search"></span></button> </div> </div> <div class="text-left"> <div id="templateSearchInfo" class="d-none"> <div> <p> Multiple terms: term1 term2<br /> <i>red apples</i><br /> returns results with all terms like:<br /> <i>Fructose levels in <strong>red</strong> and <strong>green</strong> apples</i><br /> </p> <p> Precise match in quotes: "term1 term2"<br /> <i>"red apples"</i><br /> returns results matching exactly like:<br /> <i>Anthocyanin biosynthesis in <strong>red apples</strong></i><br /> </p> <p> Exclude a term with -: term1 -term2<br /> <i>apples -red</i><br /> returns results containing <i><strong>apples</strong></i> but not <i><strong>red</strong></i>:<br /> <i>Malic acid in green <strong>apples</strong></i><br /> </p> </div> </div> <div class="modal " id="templateSearchResultModal" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-lg modal-dialog-centered"> <div class="modal-content"> <div class="modal-header modal-header--sticky shadow one-column d-block"> <div class="row no-gutters mx-1"> <div class="col mr-3"> <h1 class="" id="resultsSearchHeader"><span id="templateSearchResultNr"></span> hit<span id="templateSearchResultNrPlural">s</span> for <span id="templateSearchResultTerm"></span></h1> </div> <div class="col-auto"> <a id="scrolltopmodal" href="javascript:void(0)" onclick="scrollModalTop();" style="display: none;"><i class="co-home"></i></a> </div> <div class="col-auto"> <button data-dismiss="modal" aria-label="Close" class="btn btn-danger mt-1">Close</button> </div> </div> </div> <div class="modal-body one-column"> <!-- $$co-sanitizing-slot1$$ --> <div class="grid-container mx-n3"><div class="grid-85 tablet-grid-85"> <button aria-label="Refine" id="refineSearchModal" class="btn btn-primary float-left mt-4">Refine your search</button> <button aria-label="Refine" id="refineSearchModalHide" class="btn btn-danger float-left d-none mt-4">Hide refinement</button> </div></div> <div class="grid-container mx-n3"><div class="grid-100 tablet-grid-100"><div id="templateRefineSearch" class="d-none"></div></div></div> <div id="templateSearchResultContainer" class="searchResultsModal mx-n3"></div> <div class="grid-container mb-0"><div class="grid-100 tablet-grid-100"><div id="templateSearchResultContainerEmpty" class="co-notification d-none">There are no results for your search term.</div></div></div> </div> </div> </div> </div> </div> <!-- feedback network problems --> <div class="modal " id="templateSearchErrorModal1" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-lg modal-dialog-centered"> <div class="modal-content p-3"> <div class="modal-body text-left"> <h1 class="mt-0 pt-0">Network problems</h1> <div class="co-error">We are sorry, but your search could not be completed due to network problems. Please try again later.</div> </div> </div> </div> </div> <!-- feedback server timeout --> <div class="modal " id="templateSearchErrorModal2" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-lg modal-dialog-centered"> <div class="modal-content p-3"> <div class="modal-body text-left"> <h1 class="mt-0 pt-0">Server timeout</h1> <div class="co-error">We are sorry, but your search could not be completed due to server timeouts. Please try again later.</div> </div> </div> </div> </div> <!-- feedback invalid search term --> <div class="modal " id="templateSearchErrorModal3" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-lg modal-dialog-centered"> <div class="modal-content p-3"> <div class="modal-body text-left"> <h1 class="mt-0 pt-0">Empty search term</h1> <div class="co-error">You have applied the search with an empty search term. Please revisit and try again.</div> </div> </div> </div> </div> <!-- feedback too many requests --> <div class="modal " id="templateSearchErrorModal4" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-lg modal-dialog-centered"> <div class="modal-content p-3"> <div class="modal-body text-left"> <h1 class="mt-0 pt-0">Too many requests</h1> <div class="co-error">We are sorry, but we have received too many parallel search requests. Please try again later.</div> </div> </div> </div> </div> <!-- loading --> <div class="modal " id="templateSearchLoadingModal" role="dialog" aria-labelledby="Search results" aria-hidden="true"> <div class="modal-dialog modal-sm modal-dialog-centered"> <div class="modal-content p-3 co_LoadingDotsContainer"> <div class="modal-body"> <div class="text">Searching</div> <div class="dots d-flex justify-content-center"><div class="dot"></div><div class="dot"></div><div class="dot"></div></div></div> </div> </div> </div> </div> <style> /*.modal {*/ /* background: rgba(255, 255, 255, 0.8);*/ /*}*/ .modal-header--sticky { position: sticky; top: 0; background-color: inherit; z-index: 1055; } .grid-container { margin-bottom: 1em; /*padding-left: 0;*/ /*padding-right: 0;*/ } #templateSearchInfo{ display: none; background-color: var(--background-color-primary); margin-top: 1px; z-index: 5; border: 1px solid var(--color-primary); opacity: .8; font-size: .7rem; border-radius: .25rem; } #templateSearchLoadingModal .co_LoadingDotsContainer { z-index: 1000; } #templateSearchLoadingModal .co_LoadingDotsContainer .text { text-align: center; font-weight: bold; padding-bottom: 1rem; } #templateSearchLoadingModal .co_LoadingDotsContainer .dot { background-color: #0072BC; border: 2px solid white; border-radius: 50%; float: left; height: 2rem; width: 2rem; margin: 0 5px; -webkit-transform: scale(0); transform: scale(0); -webkit-animation: animation_dots_breath 1000ms ease infinite 0ms; animation: animation_dots_breath 1000ms ease infinite 0ms; } #templateSearchLoadingModal .co_LoadingDotsContainer .dot:nth-child(2) { -webkit-animation: animation_dots_breath 1000ms ease infinite 300ms; animation: animation_dots_breath 1000ms ease infinite 300ms; } #templateSearchLoadingModal .co_LoadingDotsContainer .dot:nth-child(3) { -webkit-animation: animation_dots_breath 1000ms ease infinite 600ms; animation: animation_dots_breath 1000ms ease infinite 600ms; } #templateSearchResultModal [class*="grid-"] { padding-left: 10px !important; padding-right: 10px !important; } #templateSearchResultTerm { font-weight: bold; } #resultsSearchHeader { display: block !important; } #scrolltopmodal { font-size: 3.0em; margin-top: 0 !important; margin-right: 15px; } @-webkit-keyframes animation_dots_breath { 50% { -webkit-transform: scale(1); transform: scale(1); opacity: 1; } 100% { opacity: 0; } } @keyframes animation_dots_breath { 50% { -webkit-transform: scale(1); transform: scale(1); opacity: 1; } 100% { opacity: 0; } } @media (min-width: 768px) and (max-width: 991px) { #templateSearchResultModal .modal-dialog { max-width: 90%; } } </style> <script> if(document.querySelector('meta[name="global_moBaseURL"]').content == "https://meetingorganizer.copernicus.org/") FINDER_URL = document.querySelector('meta[name="global_moBaseURL"]').content.replace('meetingorganizer', 'finder-app')+"search/library.php"; else FINDER_URL = document.querySelector('meta[name="global_moBaseURL"]').content.replace('meetingorganizer', 'finder')+"search/library.php"; SEARCH_INPUT = document.getElementById('search_query_solr'); SEARCH_INPUT_MODAL = document.getElementById('search_query_modal'); searchRunning = false; offset = 20; INITIAL_OFFSET = 20; var MutationObserver = window.MutationObserver || window.WebKitMutationObserver || window.MozMutationObserver; const targetNodeSearchModal = document.getElementById("templateSearchResultModal"); const configSearchModal = { attributes: true, childList: true, subtree: true }; // Callback function to execute when mutations are observed const callbackSearchModal = (mutationList, observer) => { for (const mutation of mutationList) { if (mutation.type === "childList") { // console.log("A child node has been added or removed."); picturesGallery(); } else if (mutation.type === "attributes") { // console.log(`The ${mutation.attributeName} attribute was modified.`); } } }; // Create an observer instance linked to the callback function const observer = new MutationObserver(callbackSearchModal); // Start observing the target node for configured mutations observer.observe(targetNodeSearchModal, configSearchModal); function _addEventListener() { document.getElementById('search_query_solr').addEventListener('keypress', (e) => { if (e.key === 'Enter') _runSearch(); }); document.getElementById('start_site_search_solr').addEventListener('click', (e) => { _runSearch(); e.stopPropagation(); e.stopImmediatePropagation(); return false; }); $('#templateSearchResultModal').scroll(function() { if ($(this).scrollTop()) { $('#scrolltopmodal:hidden').stop(true, true).fadeIn().css("display","inline-block"); } else { $('#scrolltopmodal').stop(true, true).fadeOut(); } }); } function scrollModalTop() { $('#templateSearchResultModal').animate({ scrollTop: 0 }, 'slow'); // $('#templateSearchResultModal').scrollTop(0); } function picturesGallery() { $('body').off('click', '.paperlist-avatar img'); $('body').off('click', '#templateSearchResultContainer .paperlist-avatar img'); searchPaperListAvatar = []; searchPaperListAvatarThumb = []; search_pswpElement = document.querySelectorAll('.pswp')[0]; if (typeof search_gallery != "undefined") { search_gallery = null; } $('body').on('click', '#templateSearchResultContainer .paperlist-avatar img', function (e) { if(searchPaperListAvatarThumb.length === 0 && searchPaperListAvatar.length === 0) { $('#templateSearchResultContainer .paperlist-avatar img').each(function () { var webversion = $(this).attr('data-web'); var width = $(this).attr('data-width'); var height = $(this).attr('data-height'); var caption = $(this).attr('data-caption'); var figure = { src: webversion, w: width, h: height, title: caption }; searchPaperListAvatarThumb.push($(this)[0]); searchPaperListAvatar.push(figure); }); } var target = $(this); var index = $('#templateSearchResultContainer .paperlist-avatar img').index(target); var options = { showHideOpacity:false, bgOpacity:0.8, index:index, spacing:0.15, history: false, focus:false, getThumbBoundsFn: function(index) { var thumbnail = searchPaperListAvatarThumb[index]; var pageYScroll = window.pageYOffset || document.documentElement.scrollTop; var rect = thumbnail.getBoundingClientRect(); return {x:rect.left, y:rect.top + pageYScroll, w:rect.width}; } }; search_gallery = new PhotoSwipe( search_pswpElement, PhotoSwipeUI_Default,[searchPaperListAvatar[index]],options); search_gallery.init(); }); } function showError(code, msg) { console.error(code, msg); $("#templateSearchLoadingModal").modal("hide"); switch(code) { case -3: // http request fail case -2: // invalid MO response case 4: // CORS case 1: // project $("#templateSearchErrorModal1").modal({}); break; case -1: // timeout $("#templateSearchErrorModal2").modal({}); break; case 2: // empty term $("#templateSearchErrorModal3").modal({}); break; case 3: // DOS $("#templateSearchErrorModal4").modal({}); break; default: $("#templateSearchErrorModal1").modal({}); break; } } function clearForm() { var myFormElement = document.getElementById("library-filters") var elements = myFormElement.elements; $(".form-check-input").prop('checked', false).change().parent().removeClass('active'); for(i=0; i<elements.length; i++) { field_type = elements[i].type.toLowerCase(); switch(field_type) { case "text": case "password": case "textarea": case "hidden": elements[i].value = ""; break; case "radio": case "checkbox": if (elements[i].checked) { elements[i].checked = false; } break; case "select-one": case "select-multi": elements[i].selectedIndex = -1; break; default: break; } } } function generateShowMoreButton(offset, term) { var code = '<button aria-label="ShowMore" id="showMore" class="btn btn-success float-right mr-2" data-offset="' + offset + '">Show more</button>'; return code; } function hideModal(id) { $("#"+id).modal('hide'); } function showModal(id) { $("#"+id).modal({}); } function prepareForPhotoSwipe() { searchPaperListAvatar = []; searchPaperListAvatarThumb = []; search_pswpElement = document.querySelectorAll('.pswp')[0]; } function _sendAjax(projectID, term) { let httpRequest = new XMLHttpRequest(); if(searchRunning) { console.log("Search running"); return; } if (!httpRequest) { console.error("Giving up :( Cannot create an XMLHTTP instance"); showError(-1); return false; } // httpRequest.timeout = 20000; // time in milliseconds httpRequest.withCredentials = false; httpRequest.ontimeout = (e) => { showError(-1, "result timeout"); searchRunning = false; }; httpRequest.onreadystatechange = function() { if (httpRequest.readyState === XMLHttpRequest.DONE) { searchRunning = false; if (httpRequest.status === 200) { let rs = JSON.parse(httpRequest.responseText); if(rs) { if(rs.isError) { showError(rs.errorCode, rs.errorMessage); } else { let html = rs.resultHTMLs; $("#modal_search_query").val(rs.term); $("#templateSearchResultTerm").html(rs.term); $("#templateSearchResultNr").html(rs.resultsNr); $("#templateRefineSearch").html(rs.filter); if(rs.filter == false) { console.log('filter empty'); $("#refineSearchModal").removeClass('d-block').addClass('d-none'); } if(rs.resultsNr==1) $("#templateSearchResultNrPlural").hide(); else $("#templateSearchResultNrPlural").show(); if(rs.resultsNr==0) { hideModal('templateSearchLoadingModal'); $("#templateSearchResultContainer").html(""); $("#templateSearchResultContainerEmpty").removeClass("d-none"); showModal('templateSearchResultModal'); } else { if((rs.resultsNr - offset)>0) { html = html + generateShowMoreButton(offset, term); } $("#templateSearchResultContainerEmpty").addClass("d-none"); if( offset == INITIAL_OFFSET) { hideModal('templateSearchLoadingModal'); $("#templateSearchResultContainer").html(html); showModal('templateSearchResultModal'); } else { $('#showMore').remove(); startHtml = $("#templateSearchResultContainer").html(); $("#templateSearchResultContainer").html(startHtml + html); } // prepareForPhotoSwipe(); } } } else { showError(-2, "invalid result"); } } else { showError(-3, "There was a problem with the request."); } } }; if(offset == INITIAL_OFFSET) { hideModal('templateSearchResultModal'); showModal('templateSearchLoadingModal'); } httpRequest.open("GET", FINDER_URL+"?project="+projectID+"&term="+encodeURI(term)+((offset>INITIAL_OFFSET)?("&offset="+(offset-INITIAL_OFFSET)) : "")); httpRequest.send(); searchRunning = true; } function _runSearch() { var projectID = document.querySelector('meta[name="global_projectID"]').content; var term = _searchTrimInput(SEARCH_INPUT.value); if(term.length > 0) { _sendAjax(projectID, term); } else { showError(2, 'Empty search term') } } function _searchTrimInput(str) { return str.replace(/^\s+|\s+$/gm, ''); } function run() { _addEventListener(); $('#templateSearchInfoBtn, #modalSearchInfoBtn').popover({ sanitize: false, html: true, content: $("#templateSearchInfo").html(), placement: "bottom", template: '<div class="popover" role="tooltip"><div class="arrow"></div><button class="m-1 float-right btn btn-sm btn-danger" id="templateSearchInfoClose"><i class="fas fa-times-circle"></i></button><h3 class="popover-header"></h3><div class="popover-body"></div></div>', title: "Search tips", }); $(document).click(function (e) { let t = $(e.target); let a = t && t.attr("data-toggle")!=="popover" && t.parent().attr("data-toggle")!=="popover"; let b = t && $(".popover").has(t).length===0; if(a && b) { $('#templateSearchInfoBtn').popover('hide'); $('#modalSearchInfoBtn').popover('hide'); } }); $('#templateSearchInfoBtn').on('shown.bs.popover', function () { $("#templateSearchInfoClose").click(function(e){ $('#templateSearchInfoBtn').popover('hide'); e.stopPropagation(); e.stopImmediatePropagation(); return false; }); }) $('#templateSearchResultModal').on('hidden.bs.modal', function(e) { $('body').off('click', '#templateSearchResultContainer .paperlist-avatar img'); var pswpElement = document.querySelectorAll('.pswp')[0]; var gallery = null; var paperListAvatar = []; var paperListAvatarThumb = []; $('.paperlist-avatar img').each(function(){ var webversion = $(this).attr('data-web'); var width = $(this).attr('data-width'); var height = $(this).attr('data-height'); var caption =$(this).attr('data-caption'); var figure = { src:webversion, w:width, h:height, title:caption }; paperListAvatarThumb.push($(this)[0]); paperListAvatar.push(figure); }); $('body').on('click', '.paperlist-avatar img', function (e) { if(paperListAvatarThumb.length === 0 && paperListAvatar.length === 0){ $('.paperlist-avatar img').each(function(){ var webversion = $(this).attr('data-web'); var width = $(this).attr('data-width'); var height = $(this).attr('data-height'); var caption =$(this).attr('data-caption'); var figure = { src:webversion, w:width, h:height, title:caption }; paperListAvatarThumb.push($(this)[0]); paperListAvatar.push(figure); }); } var target = $(this); var index = $('.paperlist-avatar img').index(target); var options = { showHideOpacity:true, bgOpacity:0.8, index:index, spacing:0.15, getThumbBoundsFn: function(index) { var thumbnail = paperListAvatarThumb[index]; var pageYScroll = window.pageYOffset || document.documentElement.scrollTop; var rect = thumbnail.getBoundingClientRect(); return {x:rect.left, y:rect.top + pageYScroll, w:rect.width}; } }; gallery = new PhotoSwipe( pswpElement, PhotoSwipeUI_Default,[paperListAvatar[index]],options); gallery.init(); }); }); $('#templateSearchResultModal').on('hide.bs.modal', function(e) { $("#templateRefineSearch").removeClass('d-block').addClass('d-none'); $("#refineSearchModalHide").removeClass('d-block').addClass('d-none'); $("#refineSearchModal").removeClass('d-none').addClass('d-block'); offset = INITIAL_OFFSET; }) $(document).on("click", "#showMore", function(e){ offset+=INITIAL_OFFSET; runSearchModal() e.stopPropagation(); e.stopImmediatePropagation(); return false; }); $(document).ready(function() { $(document).on("click", "#refineSearchModal", function (e) { $("#templateRefineSearch").removeClass('d-none').addClass('d-block'); $(this).removeClass('d-block').addClass('d-none'); $("#refineSearchModalHide").removeClass('d-none').addClass('d-block'); }); $(document).on("click", "#refineSearchModalHide", function (e) { $("#templateRefineSearch").removeClass('d-block').addClass('d-none'); $(this).removeClass('d-block').addClass('d-none'); $("#refineSearchModal").removeClass('d-none').addClass('d-block'); }); $(document).on("click", "#modal_start_site_search", function (e) { runSearchModal(); e.stopPropagation(); e.stopImmediatePropagation(); return false; }); }); } function runSearchModal() { var projectID = document.querySelector('meta[name="global_projectID"]').content; var queryString = $('#library-filters').serialize(); var term = _searchTrimInput($('#modal_search_query').val()); term+='&'+queryString; if(term.length > 0) { _sendAjax(projectID, term); } else { showError(2, 'Empty search term') } } if(document.getElementById('search_query_solr')) { run(); } </script> <!-- END_SITE_SEARCH --></div></div> <!-- END_SNIPPET:part10 --> </div> </div> </div> </div> </header> <!--=== Content ===--> <main class="one-column version-2023"> <div id="content" class="container"> <div id="page_content_container" class="CMSCONTAINER content-container"> <!-- $$CONTENT$$ --> <!-- START_LEFT_REMOVABLE_SECTION --> <!-- END_LEFT_REMOVABLE_SECTION --> <div id="cmsbox_25271" class="cmsbox "><h2>Interactive public discussion, peer review, and publication in BG</h2> <p>The process of interactive discussion, peer review, and publication in the scientific journal Biogeosciences (BG) differs from traditional scientific journals to enhance quality by transparency. It <strong>involves a discussion stage</strong>, where the manuscript is posted as preprint on EGU's preprint repository <a href="https://www.egusphere.net" target="_blank">EGUsphere</a> followed by <strong>public commenting</strong> by the referees, authors, and other members of the scientific community. All participants are encouraged to stimulate further deliberation rather than simply defend their position. Authors are invited to take an active role in the exchange by posting comments as a response to referee and community comments as soon as possible in order to stimulate further discussion. The handling editor bases their final decision on the authors' response to all comments and their corresponding revision.</p> <p>In all cases, also if no additional comments from the scientific community are received, a full peer-review process in the traditional sense, albeit in a more transparent way, is assured before publication of a paper in BG. The entire review process is guided by BG associate editors and the BG <a href="https://www.biogeosciences.net/peer_review/review_criteria.html">review criteria</a> are applied.</p> <p>The process includes the following steps:</p> <ul> <li> <span class="p-font-weight__bold">Submission of original manuscript and editor assignment</span> <p>Original manuscripts are submitted and assigned to associate editors covering the relevant <a href="https://www.biogeosciences.net/about/subject_areas.html">subject areas</a>.</p> </li> <li> <span class="p-font-weight__bold">Access review</span> <p>The handling associate editor is asked to evaluate whether the manuscript is within the scope of the journal and whether it meets a basic scientific quality. If necessary, they may ask independent referees of their choice for support.&nbsp;They can suggest <strong>technical corrections</strong> (typing errors, clarification of figures, etc.) before posting the manuscript as a preprint. Further requests for revision of the scientific contents are not permitted at this stage of the review process but shall be expressed in the interactive discussion.</p> </li> <li> <span class="p-font-weight__bold">Open discussion (6 weeks) on EGUsphere</span> <p>After acceptance of the manuscript for public peer review and discussion, it appears as a preprint and is citable with a digital object identifier (DOI). The discussion phase represents a unique opportunity to engage in an iterative and developmental reflective process. During this phase interactive comments can be posted by nominated referees (anonymous or named) and by interested members of the scientific community (named). All participants are encouraged to stimulate further deliberation rather than simply to defend their position. This enhancement-led process is offered to maximize the impact of the article. Normally, every preprint receives at least two referee comments. Authors are invited to take an active role in the debate by posting author comments as a response to referee comments and comments of the scientific community as soon as possible in order to stimulate further discussion by interested scientists. After the open discussion, no additional community comments and referee comments are accepted. Only contact authors and the handling editor have the opportunity to post author and editor comments, respectively, beyond the open discussion.<li> <span class="p-font-weight__bold">Final response and peer-review completion</span> <p>After the open discussion, the authors are expected to post a response to all comments within 3 weeks, in case they have not done so during the open discussion. Based on the responses, the associate editor either invites the authors to submit a revised manuscript or directly rejects the manuscript. If necessary they may also consult referees in the same way as during the completion of a traditional peer-review process.</p> </li></p> </li> <li> <span class="p-font-weight__bold">Publication of final revised paper in BG<a name="tpdr"></a></span> <p>In the case of acceptance, the final revised paper is typeset and proofread. Then it is published on the BG website with a direct link to the preceding preprint and interactive discussion. In addition, all referee and associate editor reports, the authors' response, as well as the different manuscript versions of the peer-review completion will be published (only valid for manuscripts submitted from 01 February 2014).&nbsp;All publications (preprint, interactive comments, final revised paper) are permanently archived, citable, and remain accessible to the open public.</p> </li> </ul> <div class="co-notification"> <p>The timing indicated above is a guideline which may have to be modified according to the availability and response times of editors, referees, and authors.</p> <p>The submission of comments and replies which continue the discussion of scientific papers beyond the limits of immediate interactive discussion is encouraged. Such peer-reviewed comments undergo the same process of peer review and publication as described above: after appearance and discussion, they may also be published in BG if sufficiently substantial.</p> <p>If a manuscript that has been posted as a preprint is not accepted for publication as a final paper in BG, the authors have several options to proceed as outlined under frequently asked questions, <a href="https://www.biogeosciences.net/about/faqs.html#chapter6">point 6</a>.&nbsp;For further information on the definition and standing of manuscripts in discussion, please read the <a href="https://cdn.egu.eu/media/filer_public/41/f1/41f1b237-9601-49a1-a43f-faf82d362115/discussionpapers.pdf" target="_new">EGU Position Statement</a>.</p> </div> <a name="typesofinteractivecomments"></a> <h2>Types of interactive comments</h2> <p>In the interactive public discussion, the following types of interactive comments can be submitted for immediate non-peer-reviewed publication alongside the preprint (manuscript in discussion):</p> <ul> <li><strong>Community comments (CCs)</strong> can be posted by any registered member of the scientific community (free online registration). Such comments are attributed, i.e. posted under the name of the commenter.</li> <li><strong>Referee comments (RCs)</strong> can only be posted by the referees involved in the peer review of the manuscript in discussion. They can be anonymous or attributed (according to the referee's preference).</li> <li><strong>Editor comments (ECs)</strong> can only be posted by the editor of the manuscript in discussion.</li> <li><strong>Author comments (ACs)</strong> can only be posted by the contact authors of the manuscript in discussion on behalf of all co-authors. Co-authors can post CCs but not ACs. After the open discussion, during the final response, the author comments should be structured in a clear and easy-to-follow sequence: <strong>(1) comments from referees/community, (2) author's response, and (3) author's changes in manuscript</strong>.</li> </ul> <p>The authors and editor of a manuscript in open discussion are automatically informed via email about comments in the interactive public discussion. Alert services are also available to other members of the scientific community. The interactive discussion is supervised but not actively moderated by the editors, who have the option of censoring comments that are not of substantial nature or of direct relevance to the issues raised in the manuscript in discussion or which contain personal insults. Authors are advised to follow the discussion of their preprint and to notify the Copernicus Publications Editorial Support and the handling editor in case of abusive comments. The BG editorial board reserves the right to exclude abusive commenters.</p> <p>All comments receive a DOI and are fully <strong>citable and archived</strong>. Comments can be composed by using the WYSIWYG editor for HTML content. More complex content can be uploaded as a *.pdf file and will be displayed as a supplement to the comment. Figures can directly be included in the comment.</p> <h2>Useful links</h2> <ul> <li><a href="https://www.biogeosciences.net/peer_review/finding_an_editor.html">Finding an editor</a></li> <li><a href="https://www.biogeosciences.net/peer_review/review_criteria.html">Review criteria</a></li> <li><a href="https://www.biogeosciences.net/peer_review/reviewer_recognition.html">Reviewer recognition</a></li> <li><a href="https://editor.copernicus.org/BG" target="_blank">Manuscript tracking</a></li> </ul></div><div id="cmsbox_51293" class="cmsbox "><h2>Chart of the Interactive Public Peer Review<sup>TM</sup></h2> <p class="text-center img-responsive j-image-presenter"><img src="https://www.biogeosciences.net/public_Peer_Review_Chart_with_quick_reports_post_discussion_editor_decision_medium.png" cofileid="20111" alt="Interactive Public Peer Review" /></p> <ol class="j-graphic-legend__t-numeric"> <li>1.聽Submission</li> <li>2.聽Access review</li> <li>3.聽Technical corrections</li> <li>4.聽MS posted on EGUsphere</li> <li>5.聽Comments</li> <li>6.聽Final response</li> <li>7.聽Post-discussion editor decision</li> <li>8.聽Revision</li> <li>9.聽Peer-review completion</li> <li>10.聽Final revised publication</li> </ol></div></div> </div> </main> <!--=== End Content ===--> <!-- START_SNIPPET:part9 --> <footer class="d-print-none version-2023"> <div class="footer"> <div class="container"> <div class="row align-items-center mb-3"> <div class="col-12 col-lg-auto text-center text-md-left title-wrapper"> <div id="j-header-footer" class="text-center text-md-left"> <div class="h1 text-center text-md-left"> Biogeosciences </div> <p>An interactive open-access journal of the European Geosciences Union</p> </div> </div> <div class="col-12 col-lg-auto text-center text-md-left pt-lg-2"> <div class="row align-items-center"> <div class="col-12 col-sm col-md-auto text-center text-md-left mb-3 mb-sm-0"> <span class="egu-logo"><a href="http://www.egu.eu/" target="_blank"><img src="https://www.biogeosciences.net/graphic_egu_logo_white.png" alt="" style="width: 410px; height: 325px;" /></a></span> </div> <div class="col-12 col-sm text-center text-md-left"> <span class="copernicus-logo"><a href="https://publications.copernicus.org/" target="_blank"><img src="https://www.biogeosciences.net/template_logo_copernicus_publications_177x22_white.png" alt="" style="width: 1784px; height: 330px;" /></a></span> </div> </div> </div> </div> </div> </div> <div class="links pb-4 pt-4"> <div class="container"> <div class="row align-items-center"> <div class="col-12 col-xl-auto mt-3"> <div class="row align-items-start align-items-lg-center"> <div class="col-12 mb-3 mb-md-0 pl-md-0 text-center text-md-left"><a href="https://creativecommons.org/licenses/by/4.0/" target="_blank"><i class="fab fa-creative-commons fa-lg mr-1"></i><i class="fab fa-creative-commons-by fa-lg"></i></a> All site content, except where otherwise noted, is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/" target="_blank">Creative Commons Attribution 4.0 License</a>.</div> </div> </div> <div class="col-12 text-center text-md-left col-lg-auto mt-3"> <div class="row align-items-center"> <div class="col d-md-none px-0"></div> <div class="col-auto pr-1"><a href="https://www.biogeosciences.net/about/contact.html">Contact</a></div> <div class="col-auto px-1">|</div> <div class="col-auto px-1"><a href="https://www.biogeosciences.net/imprint.html">Imprint</a></div> <div class="col-auto px-1">|</div> <div class="col-auto px-1"><a href="https://www.copernicus.org/data_protection.html" target="_blank">Data protection</a></div> <div class="col-auto pl-2"><a class="twitter-follow-button" target="_blank" href="https://twitter.com/EGU_BioGeo"><i class="fab fa-square-x-twitter fa-2x"></i></a></div> <div class="col d-md-none px-0"></div> </div> </div> </div> </div> </div> </footer> <!-- END_SNIPPET:part9 --> <!-- --></body></html>

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