<?xml version="1.0" encoding="utf-8"?> <rss version="2.0"> <channel> <title>NIG supercomputer (EN)</title> <link>https://sc.ddbj.nig.ac.jp/en</link> <description>National Institute of Genetics</description> <lastBuildDate>Wed, 12 Feb 2025 01:05:30 GMT</lastBuildDate> <docs>https://validator.w3.org/feed/docs/rss2.html</docs> <generator>https://github.com/jpmonette/feed</generator> <language>en</language> <copyright>© 2025 NIG supercomputer</copyright> <item> <title><![CDATA[Topics before 2022]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/010_topics/advanced_guide_2020-2022/advanced_guide_2020-2022</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/010_topics/advanced_guide_2020-2022/advanced_guide_2020-2022</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ---...]]></description> </item> <item> <title><![CDATA[Topics in 2023]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/010_topics/advanced_guide_2023/advanced_guide_2023</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/010_topics/advanced_guide_2023/advanced_guide_2023</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[--- ## The omics data graphing tool RIAS®️ Visualization is now available. {#rias_omics_viz_available}...]]></description> </item> <item> <title><![CDATA[Introduction]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/020_Rhelixa_RNAseq/Rhelixa_RNAseq</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/020_Rhelixa_RNAseq/Rhelixa_RNAseq</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[The RNA-seq*1 analysis pipeline has been provided by Rhelixa Corporation (CTO: Ryu Nakaki), which has a comprehensive collaboration agreement with the National Institute of Genetics, and implemented o...]]></description> </item> <item> <title><![CDATA[User manual]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/020_Rhelixa_RNAseq/Rhelixa_RNAseq_manual</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/020_Rhelixa_RNAseq/Rhelixa_RNAseq_manual</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Rhelixa Co., Ltd. <br /> 13 Aug 2020 First edition....]]></description> </item> <item> <title><![CDATA[RIAS®️ Visualization]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/030_Rhelixa_RNAseq_Visualization/030_Rhelixa_RNAseq_Visualization</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/030_Rhelixa_RNAseq_Visualization/030_Rhelixa_RNAseq_Visualization</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[An omics data graphing tool Visualization has been provided by Rhelixa Corporation (CTO: Ryu Nakaki), which has a comprehensive collaboration agreement with the National Institute of Genetics, and is ...]]></description> </item> <item> <title><![CDATA[alphafold 2.1]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_1</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_1</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Introduction...]]></description> </item> <item> <title><![CDATA[alphafold 2.2]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_2</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_2</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Introduction...]]></description> </item> <item> <title><![CDATA[Alphafold 2 3]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_3</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/040_AlphaFold/Alphafold_2_3</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[imputation server hail]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputation_server_hail</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputation_server_hail</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Tutorial 4 - HLA Genotype Imputation workflows using HIBAG]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputation_server_hibag</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputation_server_hibag</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<img src='https://github.com/genome-analytics-japan/imputation-server-logo/blob/main/logo_color.png?raw=true' alt='' style={{width:'200px'}} />...]]></description> </item> <item> <title><![CDATA[Install Manual]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.install</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.install</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<img src='https://github.com/genome-analytics-japan/imputation-server-logo/blob/main/logo_color.png?raw=true' alt='' style={{width:'200px'}} />...]]></description> </item> <item> <title><![CDATA[TogoImputation]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<img src='https://github.com/genome-analytics-japan/imputation-server-logo/blob/main/logo_color.png?raw=true' alt='' style={{width:'200px'}} />...]]></description> </item> <item> <title><![CDATA[Tutorial 1 - Using the public reference panel]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.tutorial</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.tutorial</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<img src='https://github.com/genome-analytics-japan/imputation-server-logo/blob/main/logo_color.png?raw=true' alt='' style={{width:'200px'}} />...]]></description> </item> <item> <title><![CDATA[Tutorial 2 - Using the restricted release reference panel]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.tutorial2</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/050_TogoImputation/imputationserver.tutorial2</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<img src='https://github.com/genome-analytics-japan/imputation-server-logo/blob/main/logo_color.png?raw=true' alt='' style={{width:'200px'}} />...]]></description> </item> <item> <title><![CDATA[How to use NVIDIA Clara Parabricks]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/060_parabricks/060_parabricks</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/060_parabricks/060_parabricks</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## System Overview...]]></description> </item> <item> <title><![CDATA[Benchmark (dorado)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/070_benchmark/benchmark_dorado</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/070_benchmark/benchmark_dorado</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[ベンチマーク(NVIDIA Parabricks)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/070_benchmark/benchmark_parabricks</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/070_benchmark/benchmark_parabricks</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## 概要 本ページでは、NVIDIA Parabricks (以降 Parabricks と呼ぶ) というゲノム解析ツールの性能を、最新の NVIDIA H100 SXM 80GB GPU を 8 基搭載したハードウェア環境で詳細に検証した結果を掲載する。 我々の実験では、臨床研究で用いられる典型的な全ゲノムシークエンスデータセットを使用し、計算時間と出力結果の妥当性を評価した。 その結果、NV...]]></description> </item> <item> <title><![CDATA[Experimental Services]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/080_experimental/080_experimental</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/080_experimental/080_experimental</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description>< - Program to search Apptainer image files for biocontainers. ...]]></description> </item> <item> <title><![CDATA[User Commentary]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/090_commentary/090_commentary</link> <guid>https://sc.ddbj.nig.ac.jp/docs/advanced_guides/090_commentary/090_commentary</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ <table> <tr> <td width="400">...]]></description> </item> <item> <title><![CDATA[Issuance criteria for user accounts]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/020_user_account_issurance_criteria/020_user_account_issurance_criteria</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/020_user_account_issurance_criteria/020_user_account_issurance_criteria</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Target users of the NIG supercomputer {#target-users}...]]></description> </item> <item> <title><![CDATA[Terms of Use]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/030_terms_of_use/030_terms_of_use</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/030_terms_of_use/030_terms_of_use</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Terms of Use...]]></description> </item> <item> <title><![CDATA[Related laws and regulations, etc.]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/040_legislation/040_legislation</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/010_terms_and_policies/040_legislation/040_legislation</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Foreign Exchange and Foreign Trade Act...]]></description> </item> <item> <title><![CDATA[New account registration]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/020_registration/registration</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/020_registration/registration</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document....]]></description> </item> <item> <title><![CDATA[誓約書に署名する方法]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/025_agreement_signing</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/025_agreement_signing</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[アカウントの新規登録の際には、責任者の方からの誓約書の提出が必要です。...]]></description> </item> <item> <title><![CDATA[Steps to sign a PDF (the domestic resident)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/signing_PDF_domestic_resident</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/signing_PDF_domestic_resident</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><) will send an email to the responsible person and the applicant regarding the signing of the pledge....]]></description> </item> <item> <title><![CDATA[Steps to sign a PDF (the non-domestic resident or the specific categories)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/signing_PDF_non-resident</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/025_agreement_signing/signing_PDF_non-resident</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><) will send an email to the responsible person and the applicant regarding the signing of the pledge....]]></description> </item> <item> <title><![CDATA[Change of Account Information]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/030_change_account_info/030_change_account_info</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/030_change_account_info/030_change_account_info</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><<!-- (https://sc-account.ddb...]]></description> </item> <item> <title><![CDATA[Applying for a renewal of your account of the end of the fiscal year]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/040_renewal/040_renewal</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/040_renewal/040_renewal</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[- From 4 January, applying for a renewal of your account of the end of the currnt fiscal year will be accepted....]]></description> </item> <item> <title><![CDATA[Submission of Your Usage Plan]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/050_resource_extension/050_resource_extension</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/050_resource_extension/050_resource_extension</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Usage plan...]]></description> </item> <item> <title><![CDATA[How to generate SSH public key]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/060_ssh_keys/060_ssh_keys</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/060_ssh_keys/060_ssh_keys</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[The NIG supercomputer uses SSH login with public key cryptography....]]></description> </item> <item> <title><![CDATA[How to Upload an SSH Public Key]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/062_ssh_copy_id/062_ssh_copy_id</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/062_ssh_copy_id/062_ssh_copy_id</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[The NIG supercomputer uses SSH login with public key cryptography....]]></description> </item> <item> <title><![CDATA[Change password]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/070_password/070_password</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/070_password/070_password</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Procedure...]]></description> </item> <item> <title><![CDATA[How to use billing services]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/080_billing_services/080_billing_services</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/080_billing_services/080_billing_services</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Overview...]]></description> </item> <item> <title><![CDATA[Payment method of fees]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/085_invoice/085_invoice</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/085_invoice/085_invoice</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Issuing invoices...]]></description> </item> <item> <title><![CDATA[Handling of PII]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/100_handling_of_pii/100_handling_of_pii</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/100_handling_of_pii/100_handling_of_pii</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ Personal information (user name, contact information, etc.) provided when using the NIG supercomputer will only be used for the following purposes....]]></description> </item> <item> <title><![CDATA[Contact us]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/application/110_reference/110_reference</link> <guid>https://sc.ddbj.nig.ac.jp/docs/application/110_reference/110_reference</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Contact for questions about NIG supercomputer applications and the system provided by NIG...]]></description> </item> <item> <title><![CDATA[Top Page]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/010_top_page/010_top_page</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/010_top_page/010_top_page</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Add important notice 2024 Third Term to Featured News]]></description> </item> <item> <title><![CDATA[ISMS Certificate]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/020_security_policy/010_ISMS_Certificate/010_ISMS_Certificate</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/020_security_policy/010_ISMS_Certificate/010_ISMS_Certificate</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ Division of High Performance Computing and Division of Internal Affairs in Bioinformation and DDBJ Center at National Institute of Genetics has received ISMS (ISO27001:2013, Information Security Mana...]]></description> </item> <item> <title><![CDATA[Information Security Policy (ISO27001)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/020_security_policy/020_security_policy</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/020_security_policy/020_security_policy</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<table> <tr><td> The official version of this document is the Japanese text. The English translation is provided only for reference. </td></tr> </table>...]]></description> </item> <item> <title><![CDATA[System Architecture]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/030_overview/030_overview</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/030_overview/030_overview</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ The NIG supercomputer system started its fifth phase of operation in March 2019....]]></description> </item> <item> <title><![CDATA[Current supercomputers (2019 hardware)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/020_hardware2019/020_hardware2019</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/020_hardware2019/020_hardware2019</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Overview...]]></description> </item> <item> <title><![CDATA[Next-Generation Supercomputer (2025 hardware)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/040_hardware2025/040_hardware2025</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/040_hardware2025/040_hardware2025</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Overview...]]></description> </item> <item> <title><![CDATA[Using Lustre FS]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/070_ga_lustre/070_ga_lustre</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/040_hardware/070_ga_lustre/070_ga_lustre</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[The home directories in both the general analysis division and the personal genome analysis division of the NIG supercomputer is composed of the Lustre File System....]]></description> </item> <item> <title><![CDATA[Overview of Slurm]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/Slurm</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/Slurm</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Slurm is a type of program known as a job scheduler or resource scheduler, which automatically allocates computing resources (such as CPU cores or memory) to each user in environments utilized by nume...]]></description> </item> <item> <title><![CDATA[Submitting array jobs]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/array_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/array_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you want to submit a large number of jobs (batch or parallel jobs) to the system at once, please use the array job feature....]]></description> </item> <item> <title><![CDATA[Batch Jobs]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/batch_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/batch_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## How to Use Batch Jobs {#usage_batch_job}...]]></description> </item> <item> <title><![CDATA[Interactive Jobs]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/interactive_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/interactive_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you need an interactive job, for instance, to perform calculations using a large amount of memory and CPU on a compute node but want to check the results in real-time, the following processes mig...]]></description> </item> <item> <title><![CDATA[Other Commands]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/other_commands</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/other_commands</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## How to Use GPUs...]]></description> </item> <item> <title><![CDATA[Parallel Jobs]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/parallel_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/parallel_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When running programs that utilize multiple CPU cores simultaneously for extended periods, please execute them as parallel jobs. For executing many such programs, use array jobs for parallel tasks. Th...]]></description> </item> <item> <title><![CDATA[Configuration of Slurm Partitions]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/slurm_partition</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/Slurm/slurm_partition</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[In the personal genome analysis section, for the computing nodes configuration applied for, a Slurm partition called Parabricks partition is set as the default partition, which includes all the comput...]]></description> </item> <item> <title><![CDATA[Array Jobs(array job)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/array_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/array_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Example of batch job execution]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/batch_job2</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/batch_job2</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ :::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Batch Jobs (batch job)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/batch_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/batch_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Grid Engine Overview]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/grid_engine</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/grid_engine</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Interactive Jobs (interactive job)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/interactive_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/interactive_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Other Commands]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/other_commands</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/other_commands</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[:::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Parallel Jobs (parallel job)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/parallel_jobs/parallel_jobs</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/010_JobScheduler/grid_engine/parallel_jobs/parallel_jobs</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you run a small number of programs that use multiple CPU cores and run for a long time, run them as parallel jobs. (When you execute many jobs, use the array job of parallel jobs.)...]]></description> </item> <item> <title><![CDATA[Apptainer (Singularity)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/Apptainer/Apptainer</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/Apptainer/Apptainer</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><...]]></description> </item> <item> <title><![CDATA[BioContainers Apptainer (Singularity) Images]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/BioContainers/BioContainers</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/BioContainers/BioContainers</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Introduce...]]></description> </item> <item> <title><![CDATA[Installing spack]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/spack/install_spack</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/spack/install_spack</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Spack is a package manager available with user permission....]]></description> </item> <item> <title><![CDATA[How to use spack]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/spack/use_spack</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/020_Container/spack/use_spack</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Spack is a package manager available with user permission....]]></description> </item> <item> <title><![CDATA[Analysis pipeline]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/030_AnalysisPipeline/030_AnalysisPipeline</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/030_AnalysisPipeline/030_AnalysisPipeline</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[<table> <tr> <th width="300">area name</th> <th width="300">the general analysis division</th> <th width="300">the personal genome analysis division</th> </tr>...]]></description> </item> <item> <title><![CDATA[How to use Archaea tools(formerly HCPtools)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Archaea_tools</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Archaea_tools</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you transfer files to and from the NIG supercomputer, you can use `scp` or `sftp`, which are widely used as the file transfer software. But their transfer speed is slow when a large numbers of fi...]]></description> </item> <item> <title><![CDATA[Installing HCP tools (CentOS 7)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/CentOS/install_HCPtools_002</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/CentOS/install_HCPtools_002</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you use CentOS 7 as the OS of the user's client computer, install the HCP tools client software installer from the following link....]]></description> </item> <item> <title><![CDATA[Installing HCP tools (Ubuntu Linux)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Ubuntu/install_HCPtools_003</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Ubuntu/install_HCPtools_003</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Get the installer...]]></description> </item> <item> <title><![CDATA[Installing HCP tools (Windows)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Windows/install_HCPtools_001</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/Windows/install_HCPtools_001</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Get the installer...]]></description> </item> <item> <title><![CDATA[How to write the configuration file]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/hcptools_conf</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/Archaea_tools/hcptools_conf</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Configuration file types {#configfile-types}...]]></description> </item> <item> <title><![CDATA[Run the installer and adjustment the path (Linux) ]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/Aspera_adjust_path_Linux</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/Aspera_adjust_path_Linux</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Linux, follow the above steps, the file such as `ibm-aspera-connect_4.1.0.46-linux_x86_64.tar.gz` will be downloaded. Unzip and run it with bash. You can install it with user permission....]]></description> </item> <item> <title><![CDATA[Run the installer and adjustment the path (Windows, Mac)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/Aspera_adjust_path_windows_mac</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/Aspera_adjust_path_windows_mac</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[For Windows and Mac, run the downloaded installer. The path will also be set when you run it....]]></description> </item> <item> <title><![CDATA[How to use Aspera]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/aspera</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/aspera</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[When you transfer files to and from the NIG supercomputer, you can use scp or sftp, which are widely used as the file transfer software. But their transfer speed is slow when a large numbers of files ...]]></description> </item> <item> <title><![CDATA[Installing Aspera]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/install_Aspera</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/040_CopyTool/aspera/install_Aspera</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Installing Aspera Connect transfer client software {#install-aspera}...]]></description> </item> <item> <title><![CDATA[CUDA]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/CUDA/CUDA</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/CUDA/CUDA</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## How to submit jobs that uses GPU to Grid Engine {#submit-job-to-grid-engine}...]]></description> </item> <item> <title><![CDATA[R]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/R/R</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/R/R</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[This article explains the methods for installing the R environment on the user environment of the National Institute of Genetics supercomputer and using package management. It covers the following top...]]></description> </item> <item> <title><![CDATA[RStudio Server]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/R/r_studio_server</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/R/r_studio_server</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## How to Use RStudio Server in a User Environment {#how-to-use-r-studio-server-in-userenv}...]]></description> </item> <item> <title><![CDATA[Rust]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/Rust/rust</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/Rust/rust</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Installing the Rust processor {#rust-installation-process}...]]></description> </item> <item> <title><![CDATA[Node.js, TypeScript]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/TypeScript/typescript</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/TypeScript/typescript</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## How to use TypeScript...]]></description> </item> <item> <title><![CDATA[C/C++ (GCC: GNU Compiler Collection)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/gcc/gcc</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/gcc/gcc</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## GCC version: status of support for C and C++ language standards {#support-status-for-gcc-standards}...]]></description> </item> <item> <title><![CDATA[Go]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/go/go</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/go/go</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ Go is not installed on the NIG supercomputer. You need to install Go by yourself. The following describes the way to install and use Go....]]></description> </item> <item> <title><![CDATA[C/C++ (Intel Compiler)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[The NIG supercomputer system has installed the ***Intel oneAPI Base & HPC Toolkit Multi-node***, enabling the use of the following tools. For details about each product, please refer to the following ...]]></description> </item> <item> <title><![CDATA[AI Library]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_AILib</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_AILib</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Intel OneCCL (Collective Communications Library) {#intel_oneccl}...]]></description> </item> <item> <title><![CDATA[Numeric Calculation]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_NumCalc</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_NumCalc</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Intel oneMKL (Math Kernel Library) {#intel_one-math-kernel-lib}...]]></description> </item> <item> <title><![CDATA[Other Languages]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_OtherLanguages</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_OtherLanguages</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Intel Fortran Compiler {#intel-fortran-compiler}...]]></description> </item> <item> <title><![CDATA[Parallel Computing Library]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_ParallelComLib</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_ParallelComLib</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Debugger]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_debugger</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_debugger</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Intel Distribution for GDB {#inteldistribution-gcb} A version of GDB that includes additional features for debugging on Intel CPUs, GPUs, and FPGAs compared to standard GDB....]]></description> </item> <item> <title><![CDATA[Profiler]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_profiler</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/intel_compiler/intel_compiler_profiler</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Intel Advisor...]]></description> </item> <item> <title><![CDATA[Java の使い方]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/java/java</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/java/java</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Java 処理系のインストール...]]></description> </item> <item> <title><![CDATA[Jupyter Lab]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/jupyter_lab/jupyter_lab</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/jupyter_lab/jupyter_lab</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Jupyter Lab was implemented based on Jupyter Notebook. Jupyter Lab provides better usability and supports extensions. You need to install it to use. Follow the instruction below....]]></description> </item> <item> <title><![CDATA[Jupyter Notebook]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/jupyter_notebook/jupyter_notebook</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/jupyter_notebook/jupyter_notebook</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ Jupyter Notebook is installed on the system. Follow the instruction below to use.[^1]...]]></description> </item> <item> <title><![CDATA[C/C++ (NVIDIA HPC Compiler)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/pgi_compiler/pgi_compiler</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/pgi_compiler/pgi_compiler</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[As of February 2024, the genetic research supercomputer system has implemented NVIDIA HPC SDK 23.7. The former PGI Compiler continues its development within the NVIDIA HPC Compiler as part of the NVID...]]></description> </item> <item> <title><![CDATA[Python]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/python/python</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_DevelopmentEnvironment/python/python</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ Python processors are installed from the outset on the NIG supercomputer. You can also install Python processors using a virtual environment such as `venv`, `miniconda`, etc. with user permissions....]]></description> </item> <item> <title><![CDATA[Software]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_software</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/050_software</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Refer to the links for each software for detailed usage instructions....]]></description> </item> <item> <title><![CDATA[Software Update Information]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/software_update_info</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/050_software/software_update_info</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Software update frequency...]]></description> </item> <item> <title><![CDATA[060 from application to approval]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/060_from_application_to_approval/060_from_application_to_approval</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/060_from_application_to_approval/060_from_application_to_approval</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[070 account activation]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/070_account_activation/070_account_activation</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/070_account_activation/070_account_activation</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Preparation for use (The General Analysis division)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/010_ga_application/010_ga_application</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/010_ga_application/010_ga_application</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Preparation of user's computer...]]></description> </item> <item> <title><![CDATA[How to Login (The general analysis division)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/020_ga_login/020_ga_login</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/020_ga_login/020_ga_login</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Introduction...]]></description> </item> <item> <title><![CDATA[Usage（The general analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/030_ga_usage/030_ga_usage</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/030_ga_usage/030_ga_usage</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[On the login node, you can do development work and perform analysis work as a normal Linux system....]]></description> </item> <item> <title><![CDATA[Slurm Partitions（The general analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/040_ga_slurm_partition/040_ga_slurm_partition</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/040_ga_slurm_partition/040_ga_slurm_partition</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ...]]></description> </item> <item> <title><![CDATA[Grid Engine Queue Type]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/045_ga_grid_engine_queue/045_ga_grid_engine_queue</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/045_ga_grid_engine_queue/045_ga_grid_engine_queue</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ :::danger This is an old document...]]></description> </item> <item> <title><![CDATA[Data file transfer（The general analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/050_ga_data_transfer/050_ga_data_transfer</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/050_ga_data_transfer/050_ga_data_transfer</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[For uploading and downloading data to the general analysis division of the NIG supercomputer, you can currently use the following two file transfer softwares....]]></description> </item> <item> <title><![CDATA[advance reservation]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/060_ga_advance_reservation/060_ga_advance_reservation</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/060_ga_advance_reservation/060_ga_advance_reservation</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Overview...]]></description> </item> <item> <title><![CDATA[Using General Analysis Division]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/080_using_general_analysis_division</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/080_using_general_analysis_division</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## System configuration of the general analysis division...]]></description> </item> <item> <title><![CDATA[Using large-scale storage]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/100_largescale_storage/100_largescale_storage</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/080_using_general_analysis_division/100_largescale_storage/100_largescale_storage</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description>< and [Appendix for Rules of Use (table of charges)](/application/terms_and_policies/te...]]></description> </item> <item> <title><![CDATA[Preparation for use（The Personal Genome Analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/010_pg_application/010_pg_application</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/010_pg_application/010_pg_application</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## Preparation of user's computer {#prepare-users-computer}...]]></description> </item> <item> <title><![CDATA[How to Login（The Personal Genome Analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/020_pg_login/020_pg_login</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/020_pg_login/020_pg_login</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Introduction...]]></description> </item> <item> <title><![CDATA[Usage（The Personal Genome Analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/030_pg_usage/030_pg_usage</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/030_pg_usage/030_pg_usage</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Introduction...]]></description> </item> <item> <title><![CDATA[Hoe to use Slurm GPU node specific queue of Personal genome analysis division]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/040_gpu_slurm/040_gpu_slurm</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/040_gpu_slurm/040_gpu_slurm</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Overview...]]></description> </item> <item> <title><![CDATA[Data file transfer（The Personal Genome Analysis division）]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/050_pg_data_transfer/050_pg_data_transfer</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/050_pg_data_transfer/050_pg_data_transfer</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[DDBJ Group Cloud]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/060_group_cloud/060_group_cloud</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/060_group_cloud/060_group_cloud</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ DDBJ Group Cloud is a service for sharing data that requires access restrictions, including personal genome data, within a research group....]]></description> </item> <item> <title><![CDATA[Using Personal Genome Division]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/090_using_personal_genome_division</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/090_using_personal_genome_division/090_using_personal_genome_division</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## About the Personal Genome Analysis division {#about-pg-analysis-division}...]]></description> </item> <item> <title><![CDATA[FAQ: bash]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/010_faq_bash/010_faq_bash</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/010_faq_bash/010_faq_bash</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; What is the order in which shell configuration files such as `.bashrc` are loaded? {#shell-config}...]]></description> </item> <item> <title><![CDATA[FAQ: SSH]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/020_faq_ssh/020_faq_ssh</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/020_faq_ssh/020_faq_ssh</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## &#x1F180; Public key authentication failed. {#error-pubkey-auth}...]]></description> </item> <item> <title><![CDATA[FAQ: scp etc.]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/030_faq_scp/030_faq_scp</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/030_faq_scp/030_faq_scp</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Archaea tools(formerly HCPtools)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/040_faq_archaea_tools/040_faq_archaea_tools</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/040_faq_archaea_tools/040_faq_archaea_tools</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; When transferring files, do I always have to specify the transfer source and transfer destination with absolute paths? {#available-relative-path}...]]></description> </item> <item> <title><![CDATA[Aspera]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/050_faq_aspera/050_faq_aspera</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/005_faq_software/050_faq_aspera/050_faq_aspera</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; Unable to communicate....]]></description> </item> <item> <title><![CDATA[Logging in]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/010_faq_login_general/010_faq_login_general</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/010_faq_login_general/010_faq_login_general</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; Public key authentication failed. {#error-pubkey-auth}...]]></description> </item> <item> <title><![CDATA[010 faq sshkeys mac]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/010_faq_sshkeys_mac/010_faq_sshkeys_mac</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/010_faq_sshkeys_mac/010_faq_sshkeys_mac</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[020 faq sshkeys windows]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/020_faq_sshkeys_windows/020_faq_sshkeys_windows</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/010_faq_general_analysis_division/020_faq_sshkeys_windows/020_faq_sshkeys_windows</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[FAQ: SSL-VPN, FortiClient]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/010_faq_forticlient/010_faq_forticlient</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/010_faq_forticlient/010_faq_forticlient</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; I don't know how to download the SSL-VPN client software FortiClient. {#how-to-DL-VPN}...]]></description> </item> <item> <title><![CDATA[Configure the SSL-VPN client (Linux)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_linux</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_linux</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Linux, configure the SSL-VPN client by creating and saving a configuration file 'config file' using the openfortivpn CUI....]]></description> </item> <item> <title><![CDATA[Configure the SSL-VPN client (Mac)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_mac</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_mac</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Macs, use the FortiClient GUI to configure the SSL-VPN client....]]></description> </item> <item> <title><![CDATA[Configure the SSL-VPN client (Windows)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_win</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_configure_file_win</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Wondows, use the FortiClient GUI to configure the SSL-VPN client....]]></description> </item> <item> <title><![CDATA[How to connect to the VPN (Linux)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_linux</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_linux</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Linux, connect using the openfortivpn CUI....]]></description> </item> <item> <title><![CDATA[How to connect to the VPN (MacOS)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_mac</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_mac</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For MacOS, connect using the FortiClient GUI....]]></description> </item> <item> <title><![CDATA[How to connect to the VPN (Windows)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_win</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_connection_win</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ For Windows, connect using the FortiClient GUI....]]></description> </item> <item> <title><![CDATA[Installing the SSL-VPN Client software FortiClient VPN(Linux)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_linux</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_linux</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[For Linux and Windows Subsystem for Linux 2 (WSL2), use the CUI openfortivpn....]]></description> </item> <item> <title><![CDATA[Installing the SSL-VPN Client software FortiClient VPN(MacOS)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_mac</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_mac</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Download the SSL-VPN client software "FortiClient" {#download-forticlient}...]]></description> </item> <item> <title><![CDATA[Installing the SSL-VPN Client software FortiClient VPN(Windows)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_win</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/020_faq_personal_genome/pg_login_ssl-vpn_install_win</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## Download the SSL-VPN client software "FortiClient" {#download-forticlient}...]]></description> </item> <item> <title><![CDATA[How to sign the pledge]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/010_faq_agreement_signing/010_faq_agreement_signing</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/010_faq_agreement_signing/010_faq_agreement_signing</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; What should I do if I am unable to electrically sign the pledge because I am using a mailer that can only receive text format? {#unavailable-text-only-mailer}...]]></description> </item> <item> <title><![CDATA[Account Application System]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/020_faq_account_application_system/020_faq_account_application_system</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/020_faq_account_application_system/020_faq_account_application_system</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## &#x1F180; I want to logout from the application form for use, but I cannot find the logout button. {#logout-account-application-system}...]]></description> </item> <item> <title><![CDATA[Usage plan table]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/040_faq_usage_plan/040_faq_usage_plan</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/040_faq_usage_plan/040_faq_usage_plan</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; When I try to download the usage plan table, the following screen will appear on the web browser. {#display-download-the-file}...]]></description> </item> <item> <title><![CDATA[Applying for a renewal of FY]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/050_faq_renewal/050_faq_renewal</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/050_faq_renewal/050_faq_renewal</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## &#x1F180; Currently, no papers or other deliverables have been published. I have not yet published a paper, what should I do? {#no-publications-or-presentations-yet}...]]></description> </item> <item> <title><![CDATA[Change Storage Capacity]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/060_faq_change_storagecapacity/060_faq_change_storagecapacity</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/030_faq_application/060_faq_change_storagecapacity/060_faq_change_storagecapacity</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## &#x1F180; How can I change my allocated storage space? {#change-strage-space}...]]></description> </item> <item> <title><![CDATA[Related to OS migration]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/040_faq_os_migration</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/040_faq_os_migration</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description>< are listed....]]></description> </item> <item> <title><![CDATA[faq os migration env-var]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/faq_os_migration_env-var</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/faq_os_migration_env-var</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[faq os migration login]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/faq_os_migration_login</link> <guid>https://sc.ddbj.nig.ac.jp/docs/guides/150_FAQ/040_faq_os_migration/faq_os_migration_login</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Waiting time until starting execution]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/operation/010_operation/010_operation</link> <guid>https://sc.ddbj.nig.ac.jp/docs/operation/010_operation/010_operation</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ In the line graph below, queueing time is the waiting time until starting execution. - The waiting time until starting execution is estimated by dividing the amount of jobs in the queue by the amount...]]></description> </item> <item> <title><![CDATA[Power consumption of the NIG supercomputer]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/operation/020_power_consumption/020_power_consumption</link> <guid>https://sc.ddbj.nig.ac.jp/docs/operation/020_power_consumption/020_power_consumption</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[This graph shows the power consumption of the NIG supercomputer....]]></description> </item> <item> <title><![CDATA[Statistics]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/010_statistics/010_statistics</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/010_statistics/010_statistics</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Published Papers(2012)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2012</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2012</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2012 -- December 31st, 2012...]]></description> </item> <item> <title><![CDATA[Published Papers(2013)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2013</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2013</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2013 -- December 31st, 2013...]]></description> </item> <item> <title><![CDATA[Published Papers(2014)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2014</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2014</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2014 -- December 31st, 2014...]]></description> </item> <item> <title><![CDATA[Published Papers(2015)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2015</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2015</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2015 -- December 31st, 2015...]]></description> </item> <item> <title><![CDATA[Published Papers(2016)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2016</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2016</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2016 -- December 31st, 2016...]]></description> </item> <item> <title><![CDATA[Published Papers(2017)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2017</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2017</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2017 -- December 31st, 2017...]]></description> </item> <item> <title><![CDATA[Published Papers(2018)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2018</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2018</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2018 -- December 31st, 2018...]]></description> </item> <item> <title><![CDATA[Published Papers(2019)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2019</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2019</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2019 -- December 31st, 2019...]]></description> </item> <item> <title><![CDATA[Published Papers(2020)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2020</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2020</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[## List of papers published by users January 1st, 2020 -- December 31st, 2020...]]></description> </item> <item> <title><![CDATA[Published Papers(2021)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2021</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2021</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## List of papers published by users January 1st, 2021 -- December 31st, 2021...]]></description> </item> <item> <title><![CDATA[Published Papers(2022)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2022</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2022</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## List of papers published by users January 1st, 2022 -- December 31st, 2022...]]></description> </item> <item> <title><![CDATA[Published Papers(2023)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2023</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2023</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## List of papers published by users January 1st, 2023 -- December 31st, 2023...]]></description> </item> <item> <title><![CDATA[Published Papers(2024)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2024</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/020_papers/papers_2024</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[ ## List of papers published by users January 1st, 2024 -- December 31st, 2024...]]></description> </item> <item> <title><![CDATA[Number of accounts by institution(2023)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/030_institution/accounts_by_institution_2023</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/030_institution/accounts_by_institution_2023</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Aggregated only for universities and public research institutions (companies are not dixcclosed)....]]></description> </item> <item> <title><![CDATA[Number of accounts by institution(2024)]]></title> <link>https://sc.ddbj.nig.ac.jp/docs/report/030_institution/accounts_by_institution_2024</link> <guid>https://sc.ddbj.nig.ac.jp/docs/report/030_institution/accounts_by_institution_2024</guid> <pubDate>Wed, 12 Feb 2025 01:05:30 GMT</pubDate> <description><![CDATA[Aggregated only for universities and public research institutions (companies are not dixcclosed)....]]></description> </item> <item> <title><![CDATA[May 13, 2021: Configuration changes to the general analysis division short queue]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-05-12-shortq</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-05-12-shortq</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[<!-- truncate -->...]]></description> </item> <item> <title><![CDATA[(終了) 2021年7月6日(火) 富士市内での電気通信設備の移転実施に伴う通信断のお知らせ]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-06-02-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-06-02-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-06-02 ---...]]></description> </item> <item> <title><![CDATA[(復旧)2021年7月22日（木) qlogin等の障害のお知らせ]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-07-22-qlogin</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-07-22-qlogin</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-07-22 ---...]]></description> </item> <item> <title><![CDATA[(Ended)[Maintenance] November 12 - November 18, 2021: Scheduled Maintenance.]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-14-scheduled-maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-14-scheduled-maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-09-14 ---...]]></description> </item> <item> <title><![CDATA[September 17, 2021: Apology for Luster6 disk failure]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-15-lustre6-3</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-15-lustre6-3</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-09-17 ---...]]></description> </item> <item> <title><![CDATA[[Outage] September 15, 2021: Notice of Luster6 disk failured]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-15-lustre6</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-15-lustre6</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-09-15 ---...]]></description> </item> <item> <title><![CDATA[(Follow-up)[Outage] September 17, 2021: Lustre6 disk failure on September 15, 2021]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-17-lustre6-2</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-17-lustre6-2</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-09-17 ---...]]></description> </item> <item> <title><![CDATA[(終了)【障害】2021年9月17日（金） Lustre7メンテナンスのお知らせ]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-17-lustre7</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-09-17-lustre7</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-09-17 ---...]]></description> </item> <item> <title><![CDATA[(Ended)[Maintenance] October 4, 2021: 10:30-10:45, October 4, 2021, Access to Lustre6 will be unavailable due to Lustre6 failure recovery work.]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-10-01-lustre6</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-10-01-lustre6</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-10-01 ---...]]></description> </item> <item> <title><![CDATA[(Recovered) [Outage] October 7, 2021: Large scale archive storage access failure on October 8, 2021]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-10-08-ts4500</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-10-08-ts4500</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-10-08 ---...]]></description> </item> <item> <title><![CDATA[(Recovered) [Outage] November 9, 2021: I/O interruption in some areas of Lustre6]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2021-11-09-lustre6</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2021-11-09-lustre6</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2021-11-09 ---...]]></description> </item> <item> <title><![CDATA[(Ended)[Maintainance] January 12, 2022: Network Maintenance on Wednesday, January 12, 2022]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-01-12-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-01-12-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-01-12 ---...]]></description> </item> <item> <title><![CDATA[(Ended)[Maintainance] March 23, 2022: Network Maintenance on Wednesday, March 23, 2022]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-02-22-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-02-22-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-02-22 ---...]]></description> </item> <item> <title><![CDATA[(Ended)[Outage] March 5, 2022: Emergency maintenance due to disk failure of GPFS1 on Saturday, March 5, 2022]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-05-gpfs1</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-05-gpfs1</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ ## Overview...]]></description> </item> <item> <title><![CDATA[(Ended)[Maintainance] March 23, 2022: Network Maintenance due to Switchover to SINET6 on Wednesday, March 23, 2022]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-07-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-07-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-03-07 ---...]]></description> </item> <item> <title><![CDATA[March 17, 2022: Addition of New Personal Genome Analysis Gateway]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-16-gateway</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-16-gateway</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ ## Overview...]]></description> </item> <item> <title><![CDATA[(Ended) March 17, 2022: Emergency Restart of the General Analysis division Gateway]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-17-gateway</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-17-gateway</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-03-17 ---...]]></description> </item> <item> <title><![CDATA[March 17, 2022: Addition of New General Analysis Gateway]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-17-gateway_ga</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-03-17-gateway_ga</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[April 5, 2022: Reducesed DDBJ Group Cloud fees]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-05-news_DGC</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-05-news_DGC</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[The basic fee for DDBJ Group Cloud has been reduced from 15 million yen to 3.5 million yen....]]></description> </item> <item> <title><![CDATA[April 12, 2022: Added pages for high-speed data transfer software Aspera and HCP tools]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-12-news_Aspera_HCP</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-12-news_Aspera_HCP</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[Added pages for high-speed data transfer software Aspera and HCP tools....]]></description> </item> <item> <title><![CDATA[April 12, 2022: Updated Grid Engine page]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-12-news_Grid_engine</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-12-news_Grid_engine</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[Revised description. Added slides presented at Data Scientist Training Session of Informatics In Biology, Medicine and Pharmacology(IIBMP) 2021 conference....]]></description> </item> <item> <title><![CDATA[(Ended)[Maintenance] June 28 - July 1, 2022: Scheduled Maintenance.]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-25-scheduled-maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-04-25-scheduled-maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-04-25 ---...]]></description> </item> <item> <title><![CDATA[May 10, 2022: Added the introduction page of PortablePipeline developed by Professor Yoshitake of the University of Tokyo]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-10-news_PortablePipeline</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-10-news_PortablePipeline</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[For the NGS analysis pipeline, the tool called Portablepipeline has been developed by Professor Kazutoshi Yoshitake of the Laboratory of Aquatic Molecular Biology and Biotechnology, Aquatic Bioscienc...]]></description> </item> <item> <title><![CDATA[May 13, 2022: Suspend acceptance of the account application of the personal genome anaysis division and large-scale storage on the general analysis division]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-13-suspension-of-applications</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-13-suspension-of-applications</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[Thank you very much for using the NIG supercomputer....]]></description> </item> <item> <title><![CDATA[May 19, 2022: Added pages for package managers that can be run with user permission]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-19-news_guix_spack_nix</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-19-news_guix_spack_nix</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[Added pages on the home page about package managers spack and nix that can be used with user privileges....]]></description> </item> <item> <title><![CDATA[(Ended) May 20, 2022: Lustre8 Maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-20-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-05-20-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-05-20 ---...]]></description> </item> <item> <title><![CDATA[(Ended) June 8, 2022: Notice of gw2 disconnection due to create an account and apply year-end renewal system renew]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-06-08-gw2</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-06-08-gw2</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-06-08 ---...]]></description> </item> <item> <title><![CDATA[(Ended)(Extension of suspension period) June 15, 2022: Suspend acceptance of applying a NIG suprecomputer account due to renewal of the account application system]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-06-17-UserRegistration</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-06-17-UserRegistration</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-06-15 ---...]]></description> </item> <item> <title><![CDATA[July 5, 2022: Added 300TB of storage for Lustre8 personal genome analysis division]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-05-Lustre8_300TB_add</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-05-Lustre8_300TB_add</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[For reduced congestion, we have added 300TB of storage for analysis of Luster8....]]></description> </item> <item> <title><![CDATA[July 5, 2022: Application system for new use is new]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-05-news_NewApp</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-05-news_NewApp</guid> <pubDate>Fri, 17 Jan 2025 07:02:51 GMT</pubDate> <description>< - The URL for application instructions `=>` [Account Application and Change of Application ...]]></description> </item> <item> <title><![CDATA[(Recovery) July 9, 2022: Notice of system failure of the application for new use system.]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-11-newapp</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-07-11-newapp</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-07-11 ---...]]></description> </item> <item> <title><![CDATA[(Ended) August 1, 2022: The application system for use will be temporarily unavailable]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-08-01-application-unable</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-08-01-application-unable</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-08-01 ---...]]></description> </item> <item> <title><![CDATA[(Recovery) August 27, 2022: Failure of token code email distribution service for VPN connections.]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-08-30-vpn_mail</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-08-30-vpn_mail</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-08-30 ---...]]></description> </item> <item> <title><![CDATA[September 2, 2022: Added the power consumption page]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-09-02-news_PowerConsumption</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-09-02-news_PowerConsumption</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ A page about power consumption of the NIG supercomputer has been added to this homepage....]]></description> </item> <item> <title><![CDATA[(Ended) September 12, 2022: Communication interruption due to SINET6 maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-09-12-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-09-12-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2022-08-23 ---...]]></description> </item> <item> <title><![CDATA[2022-10-06-Lustre8_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-06-Lustre8_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-06-Lustre8_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-10-18-news_Imputation-Server]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-18-news_Imputation-Server</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-18-news_Imputation-Server</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-10-20-Lustre7_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-20-Lustre7_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-10-20-Lustre7_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-11-24-Lustre6_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-11-24-Lustre6_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-11-24-Lustre6_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-12-02-scheduled-maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-02-scheduled-maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-02-scheduled-maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-12-20-Lustre7_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-20-Lustre7_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-20-Lustre7_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2022-12-27-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-27-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2022-12-27-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-02-08-news_GithubDiscussions]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-02-08-news_GithubDiscussions</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-02-08-news_GithubDiscussions</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-03-08-Lustre8_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-08-Lustre8_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-08-Lustre8_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-03-14-adobe_sign]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-14-adobe_sign</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-14-adobe_sign</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-03-23-renewal-date-extended]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-23-renewal-date-extended</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-03-23-renewal-date-extended</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[April 21, 2023: Request for data migration of some users due to the start of operation of the new storage system for databases]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-04-21-data_migration</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-04-21-data_migration</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2023-04-21 ---...]]></description> </item> <item> <title><![CDATA[2023-06-05-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-06-05-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-06-05-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[June 5, 2023: Added the introduction page of the reanalysis dataset of public data of human whole genome analysis published by Professor Yosuke Kawai, NCGM]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-06-05-news_reanalysis-dataset</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-06-05-news_reanalysis-dataset</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[A reanalysis dataset of public data from the Human Whole Genome Analysis has been published by Professor Yosuke Kawai, NCGM....]]></description> </item> <item> <title><![CDATA[2023-07-03-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-03-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-03-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-07-26-gpu-configure]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-26-gpu-configure</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-26-gpu-configure</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-07-27-NewStrage_Lustre9]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-27-NewStrage_Lustre9</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-07-27-NewStrage_Lustre9</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[August 4, 2023: Creating Slurm partition (Parabricks ver 4.1) for only GPU node of the personal genome division]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-08-04-news_GPU_slurm</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-08-04-news_GPU_slurm</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ Since the number of users of GPU nodes is increasing due to the free Parabricks, we have created only for GPU nodes in the Personal Genome Analysis division so that more researchers can use the GPU n...]]></description> </item> <item> <title><![CDATA[(Ended) Tuesday, August 8, 2022: Emergency Maintenance on Lustre7]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-08-08-lustre7</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-08-08-lustre7</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2023-08-08 ---...]]></description> </item> <item> <title><![CDATA[(Ended) [Outage] September 27, 2023: I/O interruption in some areas of Lustre9]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-09-27-lustre9</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-09-27-lustre9</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2023-09-27 ---...]]></description> </item> <item> <title><![CDATA[(Ended) Failures due to power outage on Saturday, September 30, 2023]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-09-30-blackout</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-09-30-blackout</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2023-09-30 ---...]]></description> </item> <item> <title><![CDATA[2023-10-26-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-10-26-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-10-26-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-11-24-scheduled-maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-11-24-scheduled-maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-11-24-scheduled-maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2023-12-27-account_registration_system_outage_NewYearsHoliday]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2023-12-27-account_registration_system_outage_NewYearsHoliday</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2023-12-27-account_registration_system_outage_NewYearsHoliday</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-02-19-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-19-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-19-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-02-26-change-account-error]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-26-change-account-error</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-26-change-account-error</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-02-27-ssh-vpn-mail-unavailable]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-27-ssh-vpn-mail-unavailable</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-02-27-ssh-vpn-mail-unavailable</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-03-09-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-03-09-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-03-09-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[(Ended) Failures due to power outage on Tuesday, June 28, 2024]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-05-28-blackout</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-05-28-blackout</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2024-05-28 ---...]]></description> </item> <item> <title><![CDATA[2024-06-05-Lustre7_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-05-Lustre7_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-05-Lustre7_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-06-06-Lustre7_maintenance_followup]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-06-Lustre7_maintenance_followup</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-06-Lustre7_maintenance_followup</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-06-10-network]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-10-network</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-10-network</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-06-18-Lustre7_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-18-Lustre7_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-18-Lustre7_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-06-19-Lustre7_maintenance_followup]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-19-Lustre7_maintenance_followup</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-19-Lustre7_maintenance_followup</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[(Ended) [Outage] June 21, 2024: Notice of Emergency Maintenance for General Analysis Division (Lustre7)]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-21-ga_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-21-ga_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2024-06-21 ---...]]></description> </item> <item> <title><![CDATA[June 24, 2024: Important Announcement from the NIG supercomputer: 1st Period of 2024 (April - July)]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-24-important_notice_2024_April-July</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-06-24-important_notice_2024_April-July</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[date: 2024-06-24 ---...]]></description> </item> <item> <title><![CDATA[(Ended) July 1, 2024: Extended deadline for account renewal application at the end of FY2023]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-07-01-news_renewal-date-extended</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-07-01-news_renewal-date-extended</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[July 8, 2024: Partial migration of Medium nodes to Ubuntu Linux and establishment of new Gride Engine queue (medium-ubuntu.q)]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-07-08-news_medium-ubuntu-q</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-07-08-news_medium-ubuntu-q</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-08-28-Lustre8_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-08-28-Lustre8_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-08-28-Lustre8_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-09-04-Lustre8_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-09-04-Lustre8_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-09-04-Lustre8_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2024-10-25-account_system_maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-10-25-account_system_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-10-25-account_system_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[Nov. 11, 2024: Important Announcement from the NIG supercomputer: 2nd Period of 2024 (August-November)]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-11-11-important_notice_2024_Aug-Nov</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-11-11-important_notice_2024_Aug-Nov</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ ## Table of Contents...]]></description> </item> <item> <title><![CDATA[Announcement of extended maintenance of the account application system]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-05-extened_account_system_maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-05-extened_account_system_maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[<!-- truncate -->...]]></description> </item> <item> <title><![CDATA[Announcement Regarding the Replacement of the Supercomputer]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-05-supercomputer_replacement_announcement</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-05-supercomputer_replacement_announcement</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[ As previously announced on the NIG Supercomputer website, the next-generation NIG supercomputer will begin operations on March 1, 2025....]]></description> </item> <item> <title><![CDATA[2024-12-13-scheduled-maintenance]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-13-scheduled-maintenance</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2024-12-13-scheduled-maintenance</guid> <pubDate>Fri, 10 Jan 2025 05:36:29 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> <item> <title><![CDATA[2025-02-10-important_notice_2024_Dec-2025_Mar]]></title> <link>https://sc.ddbj.nig.ac.jp/en/blog/2025-02-10-important_notice_2024_Dec-2025_Mar</link> <guid>https://sc.ddbj.nig.ac.jp/en/blog/2025-02-10-important_notice_2024_Dec-2025_Mar</guid> <pubDate>Wed, 12 Feb 2025 01:05:01 GMT</pubDate> <description><![CDATA[No description available.]]></description> </item> </channel> </rss>