CINXE.COM

Understanding isoform expression by pairing long-read sequencing with single-cell and spatial transcriptomics

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <meta http-equiv="Content-Type" content="text/html; charset=UTF-8" /> <title>Understanding isoform expression by pairing long-read sequencing with single-cell and spatial transcriptomics </title> <meta name="googlebot" content="NOODP" /> <meta name="description" content="An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms" /> <meta content="/genome/34/11/1735.atom" name="HW.identifier" /> <meta name="DC.Format" content="text/html" /> <meta name="DC.Language" content="en" /> <meta content="Understanding isoform expression by pairing long-read sequencing with single-cell and spatial transcriptomics" name="DC.Title" /> <meta content="10.1101/gr.279640.124" name="DC.Identifier" /> <meta content="2024-11-01" name="DC.Date" /> <meta content="Cold Spring Harbor Laboratory Press" name="DC.Publisher" /> <meta content="Natan Belchikov" name="DC.Contributor" /> <meta content="Justine Hsu" name="DC.Contributor" /> <meta content="Xiang Jennie Li" name="DC.Contributor" /> <meta content="Julien Jarroux" name="DC.Contributor" /> <meta content="Wen Hu" name="DC.Contributor" /> <meta content="Anoushka Joglekar" name="DC.Contributor" /> <meta content="Hagen U. Tilgner" name="DC.Contributor" /> <meta content="Genome Research" name="citation_journal_title" /> <meta content="Genome Res." name="citation_journal_abbrev" /> <meta content="Cold Spring Harbor Lab" name="citation_publisher" /> <meta content="1088-9051" name="citation_issn" /> <meta content="1549-5469" name="citation_issn" /> <meta name="citation_author" content="Natan Belchikov" /> <meta name="citation_author_orcid" content="0000-0002-3816-7055" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta name="citation_author_institution" content="3Physiology, Biophysics, and Systems Biology Program, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author" content="Justine Hsu" /> <meta name="citation_author_orcid" content="0000-0003-2713-5119" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta name="citation_author" content="Xiang Jennie Li" /> <meta name="citation_author_orcid" content="0000-0001-8829-3511" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta name="citation_author_institution" content="4Computational Biology Master's Program, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author" content="Julien Jarroux" /> <meta name="citation_author_orcid" content="0000-0002-7185-6960" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta name="citation_author" content="Wen Hu" /> <meta name="citation_author_orcid" content="0000-0002-0604-2119" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta name="citation_author" content="Anoushka Joglekar" /> <meta name="citation_author_orcid" content="0000-0002-7818-6867" /> <meta name="citation_author_institution" content="5New York Genome Center, New York, New York 10013, USA;" /> <meta name="citation_author_institution" content="6Department of Biomedical Informatics, Columbia University, New York, New York 10032, USA" /> <meta name="citation_author" content="Hagen U. Tilgner" /> <meta name="citation_author_orcid" content="0000-0002-7058-3606" /> <meta name="citation_author_institution" content="1Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, New York 10065, USA;" /> <meta name="citation_author_institution" content="2Center for Neurogenetics, Weill Cornell Medicine, New York, New York 10021, USA;" /> <meta content="Understanding isoform expression by pairing long-read sequencing with single-cell and spatial transcriptomics" name="citation_title" /> <meta content="11/01/2024" name="citation_date" /> <meta content="34" name="citation_volume" /> <meta content="11" name="citation_issue" /> <meta content="1735" name="citation_firstpage" /> <meta content="1746" name="citation_lastpage" /> <meta content="34/11/1735" name="citation_id" /> <meta content="34/11/1735" name="citation_id_from_sass_path" /> <meta content="genome;34/11/1735" name="citation_mjid" /> <meta content="10.1101/gr.279640.124" name="citation_doi" /> <meta content="https://genome.cshlp.org/content/34/11/1735.abstract" name="citation_abstract_html_url" /> <meta content="https://genome.cshlp.org/content/34/11/1735.full" name="citation_fulltext_html_url" /> <meta content="https://genome.cshlp.org/content/34/11/1735.full.pdf" name="citation_pdf_url" /> <meta content="/content/34/11.cover.gif" name="issue_cover_image" /> <meta content="https://genome.cshlp.org/content/34/11/1735" name="citation_public_url" /> <meta content="39567235" name="citation_pmid" /> <meta name="citation_access" content="all" /> <meta name="citation_fulltext_world_readable" content="" /> <meta name="citation_section" content="Review" /> <meta name="robots" content="noarchive,nofollow" /> <meta name="googlebot" content="noarchive" /> <link href="/content/34/11/1719.short" rel="prev" /> <link href="/content/34/11/1747.short" rel="next" /> <link rel="stylesheet" type="text/css" href="/shared/css/hw-global.css" /> <link rel="stylesheet" type="text/css" href="/shared/css/standard-designs/design2/main.css" /> <link rel="stylesheet" type="text/css" href="/publisher/css/hw-cshljnls-global.css" /> <link rel="stylesheet" type="text/css" href="/local/css/hw-journal-global.css" /> <link rel="stylesheet" type="text/css" href="/shared/css/hw-citation-2.0-hacks.css" /> <link rel="stylesheet" type="text/css" href="/shared/css/hw-print.css" /> <link rel="stylesheet" type="text/css" href="/publisher/css/hw-cshljnls-print.css" /> <link rel="stylesheet" type="text/css" href="/shared/css/hw-page-content.css" /> <link rel="stylesheet" type="text/css" href="/publisher/css/hw-cshljnls-page-content.css" /> <link rel="stylesheet" type="text/css" href="/local/css/hw-journal-page-content.css" /><script type="text/javascript" src="/shared/js/jquery-min.js"></script><script type="text/javascript" src="/shared/js/fingerprint.js"></script><script type="text/javascript" src="/shared/js/hw-shared.js"></script><script type="text/javascript" src="/shared/js/design/hw-design1.js"></script><script type="text/javascript" src="/publisher/js/cshl-shared.js"></script><script type="text/javascript" src="/shared/js/pages/hw-content.js"></script><script type="text/javascript" src="/publisher/js/cshl-content.js"></script></head> <frameset rows="148,*"> <frame src="/content/34/11/1735.full.pdf+html?frame=header" name="HeaderLinks" title="Header Links Frame" scrolling="auto" /> <frameset cols="780,*"> <frame src="/content/34/11/1735.full.pdf#page=1&amp;view=FitH" name="ContentsPage" title="Contents Frame" /> <frame src="/content/34/11/1735.full.pdf+html?frame=sidebar" name="SidebarLinks" title="Sidebar Links Frame" /> </frameset> <noframes> <body></body> </noframes> </frameset> </html>