ensIIE Research Seminar

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[French version below] The ensIIE Research Seminar is a monthly event open to both students and professors! The seminars are followed by a coffee break and discussions. All recordings will be made available on a dedicated YouTube channel at the end of the year."> <meta property="og:title" content="ensIIE Research Seminar | LinkedIn"> <meta property="og:description" content="ensIIE Research Seminar | 56 followers on LinkedIn. [French version below] The ensIIE Research Seminar is a monthly event open to both students and professors! The seminars are followed by a coffee break and discussions. 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The seminars are followed by a coffee break and discussions. All recordings will be made available on a dedicated YouTube channel at the end of the year.\n\nIf you'd like to give a talk on a research topic you're investigating in the academic or industrial setting, please contact the seminar coordinator, Stefania Dumbrava, at stefania.dumbrava@ensiie.fr.\n\n**********\n\nLe Séminaire de Recherche de l'ensIIE est un rendez-vous mensuel ouvert à tous, étudiants et enseignants ! Chaque séance est suivie d'une pause café, propice aux échanges. L'ensemble des enregistrements sera disponible en fin d'année sur une chaîne YouTube dédiée.\n\nSi vous souhaitez présenter un sujet de recherche que vous explorez dans un cadre académique ou industriel, n'hésitez pas à contacter la coordinatrice du séminaire, Stefania Dumbrava, à stefania.dumbrava@ensiie.fr.","logo":{"contentUrl":"https://media.licdn.com/dms/image/v2/D4E0BAQEP7lUqMvKGHg/company-logo_200_200/company-logo_200_200/0/1729864338759/ensiie_research_seminar_logo?e=2147483647&v=beta&t=tAyMxMM9ASLMjJzm7pkdtHNFS4UZ1VQq3QcEs8Zn7NI","description":"ensIIE Research Seminar","@type":"ImageObject"}} </script>  </head> <body dir="ltr">  <div class="guest-upsells"> <form class="google-auth base-google-auth" action="https://www.linkedin.com/uas/login-submit" method="post"> <input name="loginCsrfParam" value="cf1f1511-5b09-412d-8795-03b57e50b4c6" type="hidden"> <input name="session_redirect" value="https://www.linkedin.com/showcase/ensiie-research-seminar/" type="hidden"> <input 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babybear:rounded-[0px] -z-1">  <div class="cover-img__image-frame relative w-full overflow-hidden pb-[calc((134/782)*100%)]"> <div class="cover-img__image-position absolute top-0 right-0 bottom-0 left-0 "> <img class="cover-img__image relative w-full h-full object-cover" src="https://media.licdn.com/dms/image/v2/D4E3DAQHYd9I_l2yVNw/image-scale_191_1128/image-scale_191_1128/0/1729086342780/ensiie_research_seminar_cover?e=2147483647&v=beta&t=nQNZoZC0rdtx7lhFcpTBCVqxeAZa4VRea-9z8Q0lna8" fetchpriority="auto" data-embed-id="cover-image" alt> </div> </div>  </figure> <div class="top-card-layout__card relative p-2 papabear:p-details-container-padding"> <div class="top-card-layout__entity-image-container flex"> <img class="inline-block relative w-16 h-16 top-card-layout__entity-image shadow-color-shadow shadow-[0_4px_12px] border-2 border-solid border-color-surface mt-[-70px] mb-[14px] papabear:border-4 papabear:mt-[-100px] papabear:mb-[18px]" 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whitespace-pre-wrap text-color-text" data-test-id="about-us__description">[French version below] The ensIIE Research Seminar is a monthly event open to both students and professors! The seminars are followed by a coffee break and discussions. All recordings will be made available on a dedicated YouTube channel at the end of the year. If you'd like to give a talk on a research topic you're investigating in the academic or industrial setting, please contact the seminar coordinator, Stefania Dumbrava, at stefania.dumbrava@ensiie.fr. ********** Le Séminaire de Recherche de l'ensIIE est un rendez-vous mensuel ouvert à tous, étudiants et enseignants ! Chaque séance est suivie d'une pause café, propice aux échanges. L'ensemble des enregistrements sera disponible en fin d'année sur une chaîne YouTube dédiée. Si vous souhaitez présenter un sujet de recherche que vous explorez dans un cadre académique ou industriel, n'hésitez pas à contacter la coordinatrice du séminaire, Stefania Dumbrava, à stefania.dumbrava@ensiie.fr.</p> <dl class="mt-6">  <div class="mb-2 flex papabear:mr-3 mamabear:mr-3 babybear:flex-wrap" data-test-id="about-us__industry"> <dt class="font-sans text-md font-bold text-color-text break-words w-40 papabear:flex-shrink-0 papabear:mr-3 mamabear:flex-shrink-0 mamabear:mr-3 babybear:mb-1"> Industry </dt> <dd class="font-sans text-md text-color-text break-words overflow-hidden"> Higher Education </dd> </div> <div class="mb-2 flex papabear:mr-3 mamabear:mr-3 babybear:flex-wrap" data-test-id="about-us__size"> <dt class="font-sans text-md font-bold text-color-text break-words w-40 papabear:flex-shrink-0 papabear:mr-3 mamabear:flex-shrink-0 mamabear:mr-3 babybear:mb-1"> Company size </dt> <dd class="font-sans text-md text-color-text break-words overflow-hidden"> 201-500 employees </dd> </div>   </dl> </div> </section> <section class="core-section-container core-section-container--with-border border-b-1 border-solid border-color-border-faint py-4 updates" data-test-id="updates">  <h2 class="core-section-container__title section-title"> Updates </h2>  <div class="core-section-container__content break-words"> <ul class="updates__list"> <li class="mb-1"> <div data-id="entire-feed-card-link" class="relative"> <a class="main-feed-card__overlay-link absolute left-0 top-0 h-full w-full z-1 !border-0" href="https://www.linkedin.com/posts/ensiie-research-seminar_activity-7259195117494833153-dO2I" data-id="main-feed-card__full-link" data-tracking-control-name="organization_guest_main-feed-card__full-link" data-tracking-will-navigate aria-label="Update 1"> </a> <article class="relative pt-1.5 px-2 pb-0 bg-color-background-container container-lined main-feed-activity-card papabear:max-w-[550px]" data-activity-urn="urn:li:activity:7259195117494833153" data-featured-activity-urn="urn:li:activity:7259195117494833153" data-attributed-urn="urn:li:ugcPost:7259195117024997376" data-id="main-feed-card">   <div class="flex items-center font-sans mb-1" data-test-id="main-feed-activity-card__entity-lockup"> <a href="https://www.linkedin.com/showcase/ensiie-research-seminar/?trk=organization_guest_main-feed-card_feed-actor-image" class="relative" data-tracking-control-name="organization_guest_main-feed-card_feed-actor-image" data-tracking-will-navigate> <img class="inline-block relative w-6 h-6 " data-delayed-url="https://media.licdn.com/dms/image/v2/D4E0BAQEP7lUqMvKGHg/company-logo_100_100/company-logo_100_100/0/1729864338759/ensiie_research_seminar_logo?e=2147483647&v=beta&t=DsJ4zzG8GwLBsNToKwIvmRYe7koFyiHx6oYZ4-Saltw" data-ghost-classes="bg-color-entity-ghost-background" data-ghost-url="https://static.licdn.com/aero-v1/sc/h/cs8pjfgyw96g44ln9r7tct85f" alt="View organization page for ensIIE Research Seminar, graphic">  </a> <div class="flex flex-col self-start min-w-0 ml-1 "> <div class="text-color-text "> <a class="text-sm link-styled no-underline leading-open" href="https://www.linkedin.com/showcase/ensiie-research-seminar/?trk=organization_guest_main-feed-card_feed-actor-name" data-tracking-control-name="organization_guest_main-feed-card_feed-actor-name" aria-label="View organization page for ensIIE Research Seminar" data-tracking-will-navigate> ensIIE Research Seminar </a>  </div> <p class="!text-xs text-color-text-low-emphasis leading-[1.33333] m-0 truncate">  56 followers </p> <span class="!text-xs text-color-text-low-emphasis leading-[1.33333] flex"> <time class="flex-none"> 2w  </time>  </span> </div>  </div> <div class="ellipsis-menu absolute right-0 top-0 !mr-0.5" data-test-id="main-feed-activity-card__ellipsis-menu"> <div class="collapsible-dropdown flex items-center relative hyphens-auto"> <button class="ellipsis-menu__trigger collapsible-dropdown__button btn-md btn-tertiary cursor-pointer !py-[6px] !px-1 flex 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data-delayed-url="https://media.licdn.com/dms/image/v2/D4E0BAQEP7lUqMvKGHg/company-logo_100_100/company-logo_100_100/0/1729864338759/ensiie_research_seminar_logo?e=2147483647&v=beta&t=DsJ4zzG8GwLBsNToKwIvmRYe7koFyiHx6oYZ4-Saltw" data-ghost-classes="bg-color-entity-ghost-background" data-ghost-url="https://static.licdn.com/aero-v1/sc/h/cs8pjfgyw96g44ln9r7tct85f" alt="View organization page for ensIIE Research Seminar, graphic">  </a> <div class="flex flex-col self-start min-w-0 ml-1 "> <div class="text-color-text "> <a class="text-sm link-styled no-underline leading-open" href="https://www.linkedin.com/showcase/ensiie-research-seminar/?trk=organization_guest_main-feed-card_feed-actor-name" data-tracking-control-name="organization_guest_main-feed-card_feed-actor-name" aria-label="View organization page for ensIIE Research Seminar" data-tracking-will-navigate> ensIIE Research Seminar </a>  </div> <p class="!text-xs text-color-text-low-emphasis leading-[1.33333] m-0 truncate">  56 followers </p> <span class="!text-xs text-color-text-low-emphasis leading-[1.33333] flex"> <time class="flex-none"> 4w  </time>  </span> </div>  </div> <div class="ellipsis-menu absolute right-0 top-0 !mr-0.5" data-test-id="main-feed-activity-card__ellipsis-menu"> <div class="collapsible-dropdown flex items-center relative hyphens-auto"> <button class="ellipsis-menu__trigger collapsible-dropdown__button btn-md btn-tertiary cursor-pointer !py-[6px] !px-1 flex items-center rounded-[50%] " aria-expanded="false" aria-label="Open menu" data-tracking-control-name="organization_guest_main-feed-card_ellipsis-menu-trigger" tabindex="0"> <icon class="ellipsis-menu__trigger-icon m-0 p-0 centered-icon" data-delayed-url="https://static.licdn.com/aero-v1/sc/h/671xosfpvk4c0kqtyl87hashi"></icon> </button> <ul class="collapsible-dropdown__list hidden container-raised absolute w-auto overflow-y-auto flex-col items-stretch z-1 bottom-auto top-[100%]" role="menu" tabindex="-1"> <li 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talk by Alexandra Calteau from <a class="link" href="https://fr.linkedin.com/company/genoscope-cns?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>Genoscope - Centre National de Séquençage</a>! Title: Développement de méthodes et d'outils en pangénomique pour l'analyse en génomique microbienne Résumé: Les procaryotes, qui comprennent les bactéries et les archées, constituent un domaine fascinant d'organismes vivants, représentant une diversité et une ubiquité remarquables. Leur impact sur la biosphère est immense, influençant la santé humaine et animale, la biogéochimie des sols et des océans, et bien d'autres choses encore. L'exploration à grande échelle des génomes microbiens a permis de découvrir les mécanismes moléculaires qui sous-tendent leur diversité, et en particulier le rôle des éléments génétiques mobiles. Ces dernières années, l'explosion des projets de séquençage a permis de stocker des centaines de milliers de génomes dans des bases de données publiques, offrant ainsi de nouvelles possibilités d'explorer la diversité, l'évolution, la physiologie et les interactions des procaryotes. Cependant, ces données repoussent les limites des approches génomiques classiques. De nouvelles méthodes et de nouveaux outils utilisant le concept de pangénomes sont apparus pour relever les défis de l'analyse génomique. La pangénomique vise à comprendre la variabilité génétique d'un groupe d'organismes, généralement d’une même espèce, en agrégeant l’information issue de l’ensemble des génomes disponibles plutôt que d’utiliser un seul génome de référence ou de réaliser des comparaisons deux à deux. Dans cette optique, le laboratoire LABGeM (<a class="link" href="https://lnkd.in/eEF7KeqB?trk=organization_guest_main-feed-card-text" target="_self" rel="nofollow" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>https://lnkd.in/eEF7KeqB</a>) travaille depuis plusieurs années sur un modèle de représentation des données génomiques sous forme de graphe de pangénomes au niveau des familles de gènes, permettant de compresser l'information de milliers de génomes tout en préservant l'organisation chromosomique des gènes. Nous développons ainsi tout un écosystème d’outils et de bases de données autour de la suite logicielle PPanGGOLiN (<a class="link" href="https://lnkd.in/eCQPUEJv?trk=organization_guest_main-feed-card-text" target="_self" rel="nofollow" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>https://lnkd.in/eCQPUEJv</a>) dans le but de permettre aux microbiologistes de réaliser des analyses génomique à grande échelle en analysant plusieurs dizaines voire centaines de génomes de la même espèce. Ce type d’analyse permet de mieux appréhender la dynamique évolutive en termes de transferts horizontaux de modules fonctionnels à l’origine de l'adaptation des microorganismes à différents écosystèmes par une diversification de leur métabolisme.</p>  </div>  <a href="https://www.linkedin.com/redir/redirect?url=https%3A%2F%2Flabgem%2Egenoscope%2Ecns%2Efr%2F&urlhash=bevJ&trk=organization_guest_main-feed-card_feed-article-content" target="_self" data-tracking-control-name="organization_guest_main-feed-card_feed-article-content" data-tracking-will-navigate class="flex flex-col feed-article-content" data-test-id="article-content"> <img alt="LABGeM prokaryote metabolism and genomics, MicroScope platform" class="lazy-load w-main-feed-card-media object-cover babybear:max-h-[400px]" data-delayed-url="https://media.licdn.com/dms/image/sync/v2/C4D27AQHMhqPx3EHs8Q/articleshare-shrink_800/articleshare-shrink_800/0/1720777918989?e=2147483647&v=beta&t=WEmd8_AbHhqEDucOnXk0nDUBO4NCOx6hoLEOkNIaM44" data-ghost-classes="tw-feed-content-ghost-image" data-ghost-url="https://static.licdn.com/aero-v1/sc/h/42byfw7gh464l64dlwodbbdez">  <section class="flex justify-between article-content__header py-1"> <header> <h2 class="tw-feed-content-title" dir="ltr" data-test-id="article-content__title"> LABGeM prokaryote metabolism and genomics, MicroScope platform </h2> <h3 class="tw-feed-content-subtitle" data-test-id="article-content__subtitle"> https://labgem.genoscope.cns.fr </h3> </header>  </section> </a>   <code id="i18n_reaction_singular" style="display: none"></code> <code id="i18n_reactions_plural" style="display: none"></code> <div class="flex items-center font-sans text-sm babybear:text-xs main-feed-activity-card__social-actions"> <a href="https://www.linkedin.com/signup?session_redirect=https%3A%2F%2Fwww%2Elinkedin%2Ecom%2Fshowcase%2Fensiie-research-seminar%2F&trk=organization_guest_main-feed-card_social-actions-reactions" target="_self" 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</div> <div class="attributed-text-segment-list__container relative mt-1 mb-1.5 babybear:mt-0 babybear:mb-0.5"> <p class="attributed-text-segment-list__content text-color-text !text-sm whitespace-pre-wrap break-words " dir="ltr" data-test-id="main-feed-activity-card__commentary">[Save the date!] The <a class="link" href="https://www.linkedin.com/showcase/ensiie-research-seminar/?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>ensIIE Research Seminar</a> Series starts in 2 weeks, October 10, 14h-15h30, with a talk by <a class="link" href="https://pt.linkedin.com/in/carla-ferreira-51882a7b?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>Carla Ferreira</a> from <a class="link" href="https://pt.linkedin.com/school/universidade-nova-de-lisboa/?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>Universidade Nova de Lisboa</a>, in the context of a visit funded by <a class="link" href="https://fr.linkedin.com/company/campusfrance?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>Campus France</a> and <a class="link" href="https://pt.linkedin.com/company/fctpt?trk=organization_guest_main-feed-card-text" target="_self" data-tracking-control-name="organization_guest_main-feed-card-text" data-tracking-will-navigate>Fundação para a Ciência e a Tecnologia (FCT)</a>! Title: Techniques for safe and highly available cloud applications Abstract: Cloud applications provide increasingly complex services on a global scale. To achieve the quality of service demanded by users, a common technique is to maintain copies of the application’s shared data across geographically dispersed locations closer to end users. To this end, it has become increasingly popular to develop applications that rely on weak consistency models where operations requested by a client are executed locally without any coordination with other replicas and immediately returned to the client. These operations are later propagated in the background, leading to different replicas’ execution orders and, potentially, divergent replica states. Replicated Data Types (RDTs) that resemble sequential data types (e.g. sets, maps) guarantee convergence by design by providing efficient and deterministic data reconciliation solutions. However, designing new RDTs is challenging. In fact, even experienced researchers may miss subtle corner cases when designing RDTs for simple data structures. In this talk, I will give an overview techniques for checking the correctness of RDTs and deriving correct-by-construction RDTs. Short bio: Carla Ferreira received a PhD from the University of Southampton (2003). She is a Full Professor at NOVA University Lisbon and a researcher at the NOVA LINCS research centre in Portugal. She currently coordinates TaRDIS - a Horizon Europe project on programming tools for decentralised swarms. Her research is concerned with developing formal calculi, techniques, and tools to express and reason about concurrent and distributed systems, with the overall goal of helping programmers build trustworthy systems. She has published in top-tier venues, including POPL, VLDB, EuroSys, OOPSLA, ESOP, MODELS, and CONCUR.</p>  </div> <ul class="grid grid-cols-6 grid-rows-[60%_40%] w-main-feed-card-media feed-images-content list-none pl-0 " data-test-id="feed-images-content"> <li class="bg-color-background-container-tint text-[0px] col-span-full row-span-full " data-test-id="feed-images-content__list-item" data-position="0"> <img class="lazy-load w-full object-cover object-center h-full babybear:max-h-[400px]" data-delayed-url="https://media.licdn.com/dms/image/v2/D4E22AQHfKuSvxjzL7Q/feedshare-shrink_2048_1536/feedshare-shrink_2048_1536/0/1727355688056?e=2147483647&v=beta&t=6lzBdhprLh5gL3B7P6UqP6G2Ng1Z7MflN8OusdMl7G0" data-ghost-url="https://static.licdn.com/aero-v1/sc/h/921ynb2z53z33mhm3061qvjag" alt="No alternative text description for this image">  </li> </ul>    <code id="i18n_reaction_singular" style="display: none"></code> <code id="i18n_reactions_plural" style="display: none"></code> <div 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