Tapan Ganguly | Faculty | About Us | Perelman School of Medicine | Perelman School of Medicine at the University of Pennsylvania

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(Physics) <br /> Presidency College, Calcutta University, India, 1974.<br /></span> <span class="fac_degree"> M.Sc. (Physics with Biophysics Major) <br /> Calcutta University , 1977.<br /></span> <span class="fac_degree"> Ph.D. (Physics/Biophysics) <br /> Calcutta University, 1985.<br /></span> </div> <a class="fac_perm_link" href="https://www.med.upenn.edu/apps/faculty/index.php/g275/p1145" target="_blank">Permanent link</a><br/> <div class="blank_space"> </div> </div>  <div class="fac_content_wrapper_2"> <div class="fac_breadcrumbs"> > <a href="https://www.med.upenn.edu">Perelman School of Medicine</a>   > <a href="https://www.med.upenn.edu/apps/my/pub_fac_search/">Faculty</a>   > Details </div>  <div class="fac_content"> <h3 class ="fac_expertise_header">Description of Research Expertise</h3> Mutational analysis of disease causing genes using several approaches<br /> Next-gen sequencing technologies and its various applications<br /> Genomics studies using whole genome and targeted DNA and RNA profiling <br /> <br><br /> <br><br /> <div class="fac_publications"> <h3>Selected Publications</h3> <span class="fac_citation"><b>Lahens Nicholas F, Ricciotti Emanuela, Smirnova Olga, Toorens Erik, Kim Eun Ji, Baruzzo Giacomo, Hayer Katharina E, Ganguly Tapan, Schug Jonathan, Grant Gregory R</b>: <i>A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression.</i> BMC genomics 18(1): 602, Aug 2017.<br /><br /></span> <span class="fac_citation"><b>N. Lahens, E. Ricciotti, E. J. Kim, G. Baruzzo, K. Hayer, T. Ganguly, J. Schug, G. Grant</b>: <i>A comparison of Illumina and Ion Torrent platforms in a study of differential gene expression</i>. ISMB 2016, Orlando, Florida 2016.<br /><br /></span> <span class="fac_citation"><b>Del Portillo A, Lagana SM, Yao Y, Uehara T, Jhala N, Ganguly T, Nagy P, Gutierrez J, Luna A, Abrams J, Liu Y, Brand R, Sepulveda JL, Falk GW, Sepulveda AR.</b>: <i>Evaluation of Mutational Testing of Preneoplastic Barrett's Mucosa by Next-Generation Sequencing of Formalin-Fixed, Paraffin-Embedded Endoscopic Samples for Detection of Concurrent Dysplasia and Adenocarcinoma in Barrett's Esophagus.</i> The Journal of Molecular Diagnostics 17(4): 412-9, Jul 2015.<br /><br /></span> <span class="fac_citation"><b>Lao Z, Kelly CJ, Yang XY, Jenkins WT, Toorens E, Ganguly T, Evans SM, Koch CJ.</b>: <i>Improved Methods to Generate Spheroid Cultures from Tumor Cells, Tumor Cells & Fibroblasts or Tumor-Fragments: Microenvironment, Microvesicles and MiRNA.</i> PloS one. 10(7): e0133895, July 2015.<br /><br /></span> <span class="fac_citation"><b>Ewens Kathryn G, Kanetsky Peter A, Richards-Yutz Jennifer, Purrazzella Juliana, Shields Carol L, Ganguly Tapan, Ganguly Arupa</b>: <i>Chromosome 3 status combined with BAP1 and EIF1AX mutation profiles are associated with metastasis in uveal melanoma.</i> Investigative ophthalmology & visual science 55(8): 5160-7, Jun 2014.<br /><br /></span> <span class="fac_citation"><b>Shoar Zohreh, Ganguly Tapan, Anderson Carol E, De Luca Francesco, Suarez Elizabeth</b>: <i>Absence of WNT4 gene mutation in a patient with MURCS association.</i> Journal of pediatric endocrinology & metabolism : JPEM 27(5-6): 555-9, May 2014.<br /><br /></span> <span class="fac_citation"><b>Margolis David J, Gupta Jayanta, Apter Andrea J, Ganguly Tapan, Hoffstad Ole, Papadopoulos Maryte, Rebbeck Tim R, Mitra Nandita</b>: <i>Filaggrin-2 variation is associated with more persistent atopic dermatitis in African American subjects.</i> The Journal of allergy and clinical immunology 133(3): 784-9, Mar 2014.<br /><br /></span> <span class="fac_citation"><b>Chen Zhao, Moran Kimberly, Richards-Yutz Jennifer, Toorens Erik, Gerhart Daniel, Ganguly Tapan, Shields Carol L, Ganguly Arupa</b>: <i>Enhanced sensitivity for detection of low-level germline mosaic RB1 mutations in sporadic retinoblastoma cases using deep semiconductor sequencing.</i> Human mutation 35(3): 384-91, Mar 2014.<br /><br /></span> <span class="fac_citation"><b>Ganguly Tapan, Chen Peiqin, Teetsel Rebecca, Zhang Lan Ping, Papaioannou Elias, Cianciarulo Joseph</b>: <i>High-throughput sequencing of high copy number plasmids from bacterial cultures by heat lysis.</i> BioTechniques 39(3): 304, 306, 308, Sep 2005.<br /><br /></span> <span class="fac_citation"><b>Ganguly Arupa, Dunbar Tanya, Chen Peiqin, Godmilow Lynn, Ganguly Tapan</b>: <i>Exon skipping caused by an intronic insertion of a young Alu Yb9 element leads to severe hemophilia A.</i> Human genetics 113(4): 348-52, Sep 2003.<br /><br /></span> </div>  <div class="bottom_part"> <a href="#top">back to top</a><br /> Last updated: 08/17/2017<br /> 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Tapan Ganguly | Faculty | About Us | Perelman School of Medicine | Perelman School of Medicine at the University of Pennsylvania