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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> <html> <head> <title>Welcome to the DeRisi Lab</title> <link href="derisilab.css" rel="stylesheet" type="text/css"> </head> <body> <table border="0" cellspacing="0" cellpadding="0" align="center" bgcolor="#FFFFFF"> <tr><td width="800"> <table border="0" cellspacing="0" cellpadding="0" align="center" > <tr> <td id="menu_bar_top" colspan="2" class="menubar" align="middle" bgcolor="#000000"> <center> <a href='http://www.ncbi.nlm.nih.gov/BLAST/'>BLAST</a> :: <a href='http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed'>PubMed</a> :: <a href='http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgi'>Entrez</a> :: <a href='http://www.plasmodb.org'>PlasmoDB</a> :: <a href='http://www.yeastgenome.org/'>SGD</a> :: <a href='http://czbiohub.org'>CZ Biohub</a> :: <a href='http://www.plos.org'>PLoS</a> :: <a href='http://directory.ucsf.edu/people_search.jsp'>Directory</a> :: <a href='http://www.ucsf.edu'>UCSF</a> </center> </td> </tr> <tr> <td colspan="2" bgcolor="#000000"> <img src='images/Balthazar-banner-800px.jpg' width='800' height='160'> </td> </tr> <tr> <td id="menu_bar_main" class="menubar" align='middle' colspan='2' bgcolor="#000000"> <center> <a href='index.php'>News</a> :: <a href='index.php?page=research'>Research</a> :: <a href='index.php?page=publications'>Publications</a> :: <a href='index.php?page=data'>Data</a> :: <a href='index.php?page=software'>Software</a> :: <a href='index.php?page=3D'>3D Printables</a> :: <a href='index.php?page=people'>People</a> :: <a href='index.php?page=contact'>Contact</a> </center> </td> </tr> <tr> <td width='242' height='100%' valign='top' class='hlink' id='left_cell' > <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2024-05-05 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/Autoreactome-2024.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=387' ><img src='webicons/JCI-Icon-2024.jpg' class='iconbox' border='0'></a> Unveiling the proteome-wide autoreactome enables enhanced evaluation of emerging CAR T cell therapies in autoimmunity<br><i>J Clin Invest 2024</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2924-08-07 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/anderson2024.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=389' ><img src='webicons/misc2024.jpg' class='iconbox' border='0'></a> Molecular mimicry in multisystem inflammatory syndrome in children<br><i>Nature Portfolio, 2024</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2024-07-01 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/Phage_Immuno.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=388' ><img src='webicons/saravaz.jpg' class='iconbox' border='0'></a> Phage Immunoprecipitation-Sequencing Reveals CDHR5 Autoantibodies in Select Patients With Interstitial Lung Disease<br><i>American College of Rheumatology, 2024</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2024-07-01 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/Pluvinage-VitaminB12.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=385' ><img src='webicons/Pluvinage-icon.jpg' class='iconbox' border='0'></a> Transcobalamin receptor antibodies in autoimmune vitamin B12 central deficiency<br><i>Sci Tran Med 2024</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2024-05-02 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/Colin-MSPredict-2024.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=386' ><img src='webicons/Colin-Predict-Icon.jpg' class='iconbox' border='0'></a> An autoantibody signature predictive for multiple sclerosis<br><i>Nat Med 2024</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-03-24 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/schrom.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=363' ><img src='webicons/schromj.jpg' class='iconbox' border='0'></a> Field assessment of BinaxNOW antigen tests as COVID-19 treatment entry point at a community testing site in San Francisco during evolving omicron surges<br><i>PLOS One, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-02-15 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/greenhouse.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=365' ><img src='webicons/greenhouse1.jpg' class='iconbox' border='0'></a> Antibodies to repeat-containing antigens in Plasmodium falciparum are exposure-dependent and short-lived in children in natural malaria infections<br><i>eLife, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-01-23 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/pittock1.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=366' ><img src='webicons/pittock2.jpg' class='iconbox' border='0'></a> Dual ankyrinG and subpial autoantibodies in a man with well-controlled HIV infection with steroid-responsive meningoencephalitis: A case report<br><i>Frontiers, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-01-29 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/cchiu.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=367' ><img src='webicons/cchiupic.jpg' class='iconbox' border='0'></a> Successful Treatment of Balamuthia mandrillaris Granulomatous Amebic Encephalitis with Nitroxoline<br><i>Emerging Infectious Diseases, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-01-04 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/maderaarticle.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=372' ><img src='webicons/maderapic1.jpg' class='iconbox' border='0'></a> Prolonged silent carriage, genomic virulence potential and transmission between staff and patients characterize a neonatal intensive care unit (NICU) outbreak of methicillin-resistant Staphylococcus aureus (MRSA)<br><i>Cambridge University Press, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2023-03-02 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/Rosenberg1.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=364' ><img src='webicons/rosen1.jpg' class='iconbox' border='0'></a> Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps<br><i>Science Direct, 2023</i> <br class='clearfix' /> </div></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr> <td width='6' height='20' id='left_rbar'></td> <td width='100' height='20' valign='middle' id='middle_rbar' class='menubar'>2024-05-23 </td> <td width='128' height='20' valign='middle' align='right' id='middle_rbar' class='menubar'> <a href='pdfs/breathe24.pdf' target='_blank'>[ PDF ]</a></td> <td width='6' height='20' id='right_rbar'></td> </tr></table> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='leftbox'><a href='index.php?pdf=381' ><img src='webicons/breathe.jpg' class='iconbox' border='0'></a> Pathobiological signatures of dysbiotic lung injury in pediatric patients undergoing stem cell transplantation<br><i>Nature Portfolio, 2024</i> <br class='clearfix' /> </div></td></tr></table><br></td><td width='558' valign='top' id='right_cell'> <table border='1' cellspacing='4' cellpadding='4'> <tr><td>This repository contains freely available models appropriate for printing on 3D printers. Such printers allow the production of cheap tools and parts that are especially useful in a labratory environment.<br> All files are in .STL format. All models depicted here were printed on the Dimension UPrint. If you would like to post your own 3D models here for printing, contact Joe DeRisi. Download and enjoy.<br></td></tr></table><br> <table border='0' cellspacing='0' cellpadding='0'> <tr><td><div class='3Dbox'><img src='module_pictures/image (3) copy.jpg' class='iconbox'><br> <a href='index.php?3D=225'>Platform Adapter</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/mini-centrifuge2.jpg' class='iconbox'><br> <a href='index.php?3D=131'>Minifuge Rotor</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/mini-centrifuge.jpg' class='iconbox'><br> <a href='index.php?3D=130'>Mini-Centrifuge-v2 (body only)</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/noda.jpg' class='iconbox'><br> <a href='index.php?3D=129'>Nodavirus</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/fmdv.jpg' class='iconbox'><br> <a href='index.php?3D=128'>FMDV</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/MurinePolyoma.jpg' class='iconbox'><br> <a href='index.php?3D=127'>Murine Polyoma</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/parvo.jpg' class='iconbox'><br> <a href='index.php?3D=126'>ParovirusB19.stl.zip</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/HRV1_icon.jpg' class='iconbox'><br> <a href='index.php?3D=206'>HRV1</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/Magpurifier.jpg' class='iconbox'><br> <a href='index.php?3D=95'>Magnetic Cell Purification Jig</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/pipet_racks_small.jpg' class='iconbox'><br> <a href='index.php?3D=92'>Single Pipet Rack</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/Objective_holder_small.jpg' class='iconbox'><br> <a href='index.php?3D=94'>Objective Case</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/Loading_Guide.jpg' class='iconbox'><br> <a href='index.php?3D=139'>Gel Loading Guide</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/GelMold.jpg' class='iconbox'><br> <a href='index.php?3D=141'>8-inch gel tray</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/cincodehybo_small.jpg' class='iconbox'><br> <a href='index.php?3D=93'>Cinco de Hybo</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/tip_loader.jpg' class='iconbox'><br> <a href='index.php?3D=101'>Tip Loader</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/double_ten_well.jpg' class='iconbox'><br> <a href='index.php?3D=99'>10 Well Double Gel Comb STL File</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/26Well.jpg' class='iconbox'><br> <a href='index.php?3D=100'>26 Well Gel Comb</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/16Well_thin.jpg' class='iconbox'><br> <a href='index.php?3D=98'>16 well 1mm Thick Gel Comb</a><br class='clearfix' /></div></td></tr><tr><td><div class='3Dbox'><img src='module_pictures/16Well.jpg' class='iconbox'><br> <a href='index.php?3D=97'>16 Well CHEF Gel Comb STL File</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/GelComb.jpg' class='iconbox'><br> <a href='index.php?3D=142'>6 Well Gel Comb (+ ladder)</a><br class='clearfix' /></div></td><td><div class='3Dbox'><img src='module_pictures/Mini_Gel_Tray.jpg' class='iconbox'><br> <a href='index.php?3D=143'></a><br class='clearfix' /></div></td></tr><tr></tr></table></td> </tr> </table> </body> </html>