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region-content"> <div id="block-system-main" class="block block-system clearfix"> <div class="content"> <div class="view view-notifications-content-node-list view-id-notifications_content_node_list view-display-id-page view-dom-id-3f35e8232a006573c57fdbdfb0c7709e"> <div class="view-content"> <div class="views-row views-row-1 views-row-odd views-row-first"> <div id="node-679" class="node node-page node-promoted node-sticky node-teaser" about="/docs/SciComp" typeof="foaf:Document"> <h2><a href="/docs/SciComp">Scientific Computing at Jefferson Lab</a></h2> <span property="dc:title" content="Scientific Computing at Jefferson Lab" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p class="rtecenter"><a href="https://scicomp.jlab.org/docs/SciComp"><img alt="JLab-LQCD-cluster_0.png" src="/docs/sites/default/files/u545/JLab-LQCD-cluster_0.png" style="height:79px; width:800px" /></a></p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/SciComp" rel="tag" title="Scientific Computing at Jefferson Lab">Read more<span class="element-invisible"> about Scientific Computing at Jefferson Lab</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-2 views-row-even"> <div id="node-699" class="node node-book node-teaser" about="/docs/node/699" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/node/699">jcache</a></h2> <span property="dc:title" content="jcache" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2024-10-07T12:15:10-04:00" datatype="xsd:dateTime" rel="sioc:has_creator">Mon, 10/07/2024 - 12:15 — <span class="username" xml:lang="" about="/docs/user/129" typeof="sioc:UserAccount" property="foaf:name" datatype="">brads</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><h2><span style="font-family:Verdana; font-size:medium"><span style="background-color:#ffffff">Name </span></span></h2> <p><span style="font-family:Verdana"><span style="background-color:#ffffff">jcache - manage files and directories on the write-through cache area</span></span></p> <p>See <a href="https://scicomp.jlab.org/docs/node/586">full documentation</a> or run 'jcache -h' on the ifarm.</p> </div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first"><a href="/docs/node/699" rel="tag" title="jcache">Read more<span class="element-invisible"> about jcache</span></a></li> <li class="comment_forbidden last"><span><a href="/docs/user/login?destination=node/699%23comment-form">Log in</a> to post comments</span></li> </ul></div> </div> </div> </div> <div class="views-row views-row-3 views-row-odd"> <div id="node-667" class="node node-book node-teaser" about="/docs/lattice_getting_started" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/lattice_getting_started">Getting Started</a></h2> <span property="dc:title" content="Getting Started" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2022-04-20T18:24:24-04:00" datatype="xsd:dateTime" rel="sioc:has_creator">Wed, 04/20/2022 - 18:24 — <span class="username" xml:lang="" about="/docs/user/545" typeof="sioc:UserAccount" property="foaf:name" datatype="">amitoj</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><div class="rtecenter"><a href="https://www.usqcd.org"><img alt="logocolor4.png" src="/docs/sites/default/files/u545/logocolor4.png" style="height:67px; width:762px" /></a></div> <div> <hr /></div> <div class="rtecenter"><img alt="User Account Flow Chart.jpg" src="/docs/sites/default/files/u545/User%20Account%20Flow%20Chart.jpg" style="height:304px; width:800px" /></div> <div class="rtecenter"><span style="font-family:Verdana,Geneva,sans-serif"><strong>Figure 1.</strong> JLab new user and cluster account request process</span></div> <div class="rtecenter"> </div></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/lattice_getting_started" rel="tag" title="Getting Started">Read more<span class="element-invisible"> about Getting Started</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-4 views-row-even"> <div id="node-638" class="node node-book node-teaser" about="/docs/FarmUsersGuide" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/FarmUsersGuide">Experimental Physics User's Guide</a></h2> <span property="dc:title" content="Experimental Physics User's Guide" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2022-03-01T09:30:21-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Tue, 03/01/2022 - 09:30 — <span class="username" xml:lang="" about="/docs/user/35" typeof="sioc:UserAccount" property="foaf:name" datatype="">ychen</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p>The scientific computing environment for experimental physics is comprised of a data analysis facility and its accompanying mass storage system. Details on the hardware are in the Scientific Computing Resources book.</p> <p>The data analysis environment includes the batch "<strong>farm</strong>" (a compute cluster) plus its associated interactive nodes and disk storage systems. Multiple files systems are accessible from both the interactive and batch nodes, and some of these are also accessible from desktops onsite.</p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/FarmUsersGuide" rel="tag" title="Experimental Physics User's Guide">Read more<span class="element-invisible"> about Experimental Physics User's Guide</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-5 views-row-odd"> <div id="node-698" class="node node-book node-teaser" about="/docs/node/698" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/node/698">Workflow - Swif2</a></h2> <span property="dc:title" content="Workflow - Swif2" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2022-01-04T10:54:15-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Tue, 01/04/2022 - 10:54 — <span class="username" xml:lang="" about="/docs/user/28" typeof="sioc:UserAccount" property="foaf:name" datatype="">larrieu</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p>Swif2 is a software system developed at Jefferson Lab that aims to help users schedule, run, and track computation jobs on batch systems both locally and at remote sites.</p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first"><a href="/docs/node/698" rel="tag" title="Workflow - Swif2">Read more<span class="element-invisible"> about Workflow - Swif2</span></a></li> <li class="comment_forbidden last"><span><a href="/docs/user/login?destination=node/698%23comment-form">Log in</a> to post comments</span></li> </ul></div> </div> </div> </div> <div class="views-row views-row-6 views-row-even"> <div id="node-660" class="node node-book node-teaser" about="/docs/filesystemsv2" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/filesystemsv2">Filesystems</a></h2> <span property="dc:title" content="Filesystems" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2021-12-02T10:22:27-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Thu, 12/02/2021 - 10:22 — <span class="username" xml:lang="" about="/docs/user/545" typeof="sioc:UserAccount" property="foaf:name" datatype="">amitoj</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p class="rtecenter"><a href="https://www.usqcd.org"><img alt="logocolor4.png" src="/docs/sites/default/files/u545/logocolor4.png" style="height:67px; width:762px" /></a></p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/filesystemsv2" rel="tag" title="Filesystems">Read more<span class="element-invisible"> about Filesystems</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-7 views-row-odd"> <div id="node-666" class="node node-book node-teaser" about="/docs/softwarev2" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/softwarev2">Software</a></h2> <span property="dc:title" content="Software" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2021-12-02T10:08:22-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Thu, 12/02/2021 - 10:08 — <span class="username" xml:lang="" about="/docs/user/545" typeof="sioc:UserAccount" property="foaf:name" datatype="">amitoj</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><div class="rtecenter"><a href="https://www.usqcd.org"><img alt="logocolor4.png" src="/docs/sites/default/files/u545/logocolor4.png" style="height:67px; width:762px" /></a></div> <div class="rtecenter"> <hr /> <ol> <li class="rteleft"><a href="https://scicomp.jlab.org/docs/softwarev2#Section1"><span style="font-family:Verdana,Geneva,sans-serif">Installed software components</span></a></li> <li class="rteleft"><a href="http://scicomp.jlab.org/docs/softwarev2#Section2"><span style="font-family:Verdana,Geneva,sans-serif">Quick Introduction to using modules</span></a></li></ol></div></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/softwarev2" rel="tag" title="Software">Read more<span class="element-invisible"> about Software</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-8 views-row-even"> <div id="node-697" class="node node-book node-teaser" about="/docs/using21g" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/using21g">21g Cluster: Useful tips</a></h2> <span property="dc:title" content="21g Cluster: Useful tips" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2021-11-30T15:08:39-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Tue, 11/30/2021 - 15:08 — <span class="username" xml:lang="" about="/docs/user/545" typeof="sioc:UserAccount" property="foaf:name" datatype="">amitoj</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p class="rtecenter"><a href="https://www.usqcd.org"><img alt="logocolor4.png" src="/docs/sites/default/files/u545/logocolor4.png" style="height:67px; width:762px" /></a></p> <hr /> <p> </p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first last"><a href="/docs/using21g" rel="tag" title="21g Cluster: Useful tips">Read more<span class="element-invisible"> about 21g Cluster: Useful tips</span></a></li> </ul></div> </div> </div> </div> <div class="views-row views-row-9 views-row-odd"> <div id="node-695" class="node node-book node-teaser" about="/docs/farm_auger_to_swif2_guide" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/farm_auger_to_swif2_guide">Auger to SWIF2</a></h2> <span property="dc:title" content="Auger to SWIF2" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2021-11-17T08:49:28-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Wed, 11/17/2021 - 08:49 — <span class="username" xml:lang="" about="/docs/user/35" typeof="sioc:UserAccount" property="foaf:name" datatype="">ychen</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p>User can submit slurm job using <strong>swif2</strong> with the old jsub scrip. Give <strong>add-jsub</strong> as first argument and <strong>-script </strong>option with old jsub-script. Please notice the default workflow for add-jsub is auger, add "<strong>-workflow workflow-name</strong>" to set the specified workflow name. Check this <a href="https://scicomp.jlab.org/cli/add-jsub.html">swif2 add-jsub</a> document page for detailed information.</p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first"><a href="/docs/farm_auger_to_swif2_guide" rel="tag" title="Auger to SWIF2">Read more<span class="element-invisible"> about Auger to SWIF2</span></a></li> <li class="comment_forbidden last"><span><a href="/docs/user/login?destination=node/695%23comment-form">Log in</a> to post comments</span></li> </ul></div> </div> </div> </div> <div class="views-row views-row-10 views-row-even views-row-last"> <div id="node-696" class="node node-book node-teaser" about="/docs/farm_swif1_to_swif2_guide" typeof="sioc:Item foaf:Document"> <h2><a href="/docs/farm_swif1_to_swif2_guide">SWIF1 to SWIF2</a></h2> <span property="dc:title" content="SWIF1 to SWIF2" class="rdf-meta element-hidden"></span><span property="sioc:num_replies" content="0" datatype="xsd:integer" class="rdf-meta element-hidden"></span> <span class="submitted"><span property="dc:date dc:created" content="2021-11-16T14:40:48-05:00" datatype="xsd:dateTime" rel="sioc:has_creator">Tue, 11/16/2021 - 14:40 — <span class="username" xml:lang="" about="/docs/user/25" typeof="sioc:UserAccount" property="foaf:name" datatype="">chen</span></span></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p><em><strong>SWIF1 </strong></em>and <em><strong>SWIF2</strong></em> have essentially the same command line interface. However, SWIF2 has different status information output from what SWIF1 produces status output. For example, in <em><strong>SWIF2</strong></em>, <a href="https://scicomp.jlab.org/cli/status.html"><strong><em>swif status</em></strong></a> adds several fields, such as finer details about status of dispatched attempts, and removes a few such as individual error type counts. The status output can be in the following formats: simple text format, XML, and JSON.</p></div></div></div> </div> <div class="clearfix"> <div class="links"><ul class="links inline"><li class="node-readmore first"><a href="/docs/farm_swif1_to_swif2_guide" rel="tag" title="SWIF1 to SWIF2">Read more<span class="element-invisible"> about SWIF1 to SWIF2</span></a></li> <li class="comment_forbidden last"><span><a href="/docs/user/login?destination=node/696%23comment-form">Log in</a> to post comments</span></li> </ul></div> </div> </div> </div> </div> <h2 class="element-invisible">Pages</h2><div class="item-list"><ul class="pager"><li class="pager-current first">1</li> <li class="pager-item"><a title="Go to page 2" href="/docs/frontpage?page=1">2</a></li> <li class="pager-item"><a title="Go to page 3" href="/docs/frontpage?page=2">3</a></li> <li class="pager-item"><a title="Go to page 4" href="/docs/frontpage?page=3">4</a></li> <li class="pager-item"><a title="Go to page 5" href="/docs/frontpage?page=4">5</a></li> <li class="pager-item"><a title="Go to page 6" href="/docs/frontpage?page=5">6</a></li> <li class="pager-item"><a title="Go to page 7" href="/docs/frontpage?page=6">7</a></li> <li class="pager-item"><a title="Go to page 8" href="/docs/frontpage?page=7">8</a></li> <li class="pager-item"><a title="Go to page 9" href="/docs/frontpage?page=8">9</a></li> <li class="pager-ellipsis">…</li> <li class="pager-next"><a title="Go to next page" href="/docs/frontpage?page=1">next ›</a></li> <li class="pager-last last"><a title="Go to last page" href="/docs/frontpage?page=18">last »</a></li> </ul></div> </div> </div> </div> </div> </div> <div class="region region-footer"> <div id="block-system-powered-by" class="block block-system clearfix"> <div class="content"> <span>Powered by <a href="https://www.drupal.org">Drupal</a></span> </div> </div> </div> </div></div></div></div>  </div>  </div>  </body> </html>