Medical Subject Headings RDF

<!DOCTYPE html> <html lang="en"> <head> <meta charset="utf-8" /> <title>Medical Subject Headings RDF</title> <meta name="description" content="" /> <meta name="author" content="" /> <meta http-equiv="Content-Type" content="text/html" /> <meta http-equiv="X-UA-Compatible" content="IE=edge" /> <meta name="viewport" content="width=device-width, initial-scale=1.0" /> <meta property="og:type" content="website" /> <meta property="og:title" content="MeSH Linked Data" /> <meta property="og:url" content="https://id.nlm.nih.gov/mesh/" /> <meta property="og:description" content="Persistent URLs, Ontology, and SPARQL endpoint about Medical Subject Headings for semantic web researchers and developers."/> <meta property="twitter:card" content="summary" /> <meta property="twitter:site" content="@nlm_news" /> <meta property="twitter:title" content="MeSH Linked Data" /> <meta property="twitter:description" content="Persistent URLs, Ontology, and SPARQL endpoint about Medical Subject Headings for 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class="row"> <div class="col-md-12"> <div class="meshrdf-heading"> <h1>Medical Subject Headings <span class='rdf'>RDF</span></h1> </div> <ul class="nav nav-pills pull-left"> <li role="presentation"><a href="/mesh/">Home</a></li> <li role="presentation"><a href="/mesh/query">SPARQL Query Editor</a></li> <li role="presentation"><a href="/mesh/lookup">Lookup</a></li> <li role="presentation"><a href="https://hhs.github.io/meshrdf/">Documentation</a></li> <li role="presentation"><a href="https://hhs.github.io/meshrdf/sample-queries">Sample Queries</a></li> <li role="presentation"><a href="https://nlmpubs.nlm.nih.gov/projects/mesh/rdf/">Download</a></li> <li role="presentation"><a href="/mesh/swagger/ui">API</a></li> <li role="presentation"><a href="https://www.nlm.nih.gov/mesh/">MeSH Home</a></li> </ul> </div> </div> </div> </div> <div class="row content"> <div id="main" class="col-md-4 col-sm-4 meshrdf-description"> <p>Medical Subject Headings (MeSH) RDF is a linked data representation of the <a href="https://www.nlm.nih.gov/mesh/">MeSH</a> biomedical vocabulary produced by the National Library of Medicine. MeSH RDF includes a downloadable file in <a href="https://nlmpubs.nlm.nih.gov/projects/mesh/rdf/mesh.nt.gz">RDF N-Triples format</a>, a <a href="/mesh/query">SPARQL query editor</a>, a <a href="http://hhs.github.io/meshrdf/sparql-and-uri-requests">SPARQL endpoint (API)</a>, and a RESTful interface for retrieving MeSH data.</p> <p>MeSH RDF supports the following use cases:</p> <ul> <li>Look up terms in the MeSH vocabulary. Example: <a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0A+SELECT+%3Fd+%3FdName+%3Fc+%3FcName%0D%0A+FROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0A+%0D%0A+WHERE+%7B%0D%0A+++%0D%0A+%3Fd+a+meshv%3ADescriptor+.%0D%0A+%3Fd+meshv%3Aactive+1+.%0D%0A+%3Fd+meshv%3Aconcept+%3Fc+.%0D%0A+%3Fd+rdfs%3Alabel+%3FdName+.%0D%0A+%3Fc+rdfs%3Alabel+%3FcName%0D%0A+FILTER%28REGEX%28%3FdName%2C%22infection%22%2C%22i%22%29+%7C%7C+REGEX%28%3FcName%2C%22infection%22%2C%22i%22%29%29%0D%0A+%0D%0A+%7D%0D%0A+ORDER+BY+%3Fd%0D%0A%0D%0A%23Find+a+set+of+descriptors+and+terms+that+contain+%22infection.%22&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Find all MeSH Descriptors and Concepts with "infection" in the name</a>. <li>Get data for a particular MeSH identifier. Example: This URL will provide json data for the Descriptor for Ofloxacin: <a href="https://id.nlm.nih.gov/mesh/D015242.json">https://id.nlm.nih.gov/mesh/D015242.json</a></li> <li>Find any assertion in the MeSH vocabulary. Example: <a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0ASELECT+*+%0D%0AFROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0AWHERE+%7B%0D%0A++mesh%3AD015242+meshv%3ApharmacologicalAction+%3Fpa+.%0D%0A++%3Fpa+rdfs%3Alabel+%3FpaLabel+.%0D%0A%7D+%0D%0A&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Get all of the pharmacological actions for a given substance</a>.</li> <li>Download any subset of the MeSH vocabulary using SPARQL. Example: <a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0ASELECT+*+%0D%0AFROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0AWHERE+%7B%0D%0A++%3FDescriptorUI+rdf%3Atype+meshv%3ADescriptor+.%0D%0A++%3FDescriptorUI+rdfs%3Alabel+%3FLabel++%0D%0A%7D+%0D%0AORDER+BY+%3FLabel%0D%0A&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Get all descriptor labels and identifiers</a>.</li> <li>Find all the allowable qualifiers for a MeSH Descriptor. Example: <a href="/mesh/lookup?form=descriptor&label=Infection%20Control">Find all the allowable qualifiers for Infection Control</a>.</li> <li>Get all entry terms for a MeSH Descriptor. Examples: <ul class="usecaseex"> <li><a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0ASELECT+%3FEntryTerm%0D%0AFROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0AWHERE+%7B%0D%0A++mesh%3AD015242+meshv%3Aconcept+%3Fconcept+.%0D%0A++%3Fconcept+meshv%3Aterm+%3Fterm+.%0D%0A++%3Fterm+rdfs%3Alabel+%3FEntryTerm%0D%0A%7D+%0D%0A%0D%0A%23Entry+Terms+for+Ofloxacin+%28D015242%29%0D%0A&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Get entry terms for Ofloxacin via SPARQL API</a></li> <li><a href="/mesh/lookup?form=descriptor&label=Ofloxacin">Get entry terms for Ofloxacin via the Lookup API</a></li> </ul> </li> <li>Get definitions for a MeSH Concept. Example: <a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0ASELECT+*%0D%0AFROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0AWHERE+%7B%0D%0A++mesh%3AD001641+rdfs%3Alabel+%3FDescriptorLabel+.%0D%0A++mesh%3AD001641+meshv%3ApreferredConcept+%3Fconcept+.%0D%0A++%3Fconcept+meshv%3AscopeNote+%3FScopeNote+%0D%0A%7D+%0D%0A%0D%0A&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Get definitions for Bicuspid</a>.</li> <li>Get all descendants of a MeSH Descriptor. Example: <a href="/mesh/query?query=PREFIX+rdf%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23%3E%0D%0APREFIX+rdfs%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2000%2F01%2Frdf-schema%23%3E%0D%0APREFIX+xsd%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2001%2FXMLSchema%23%3E%0D%0APREFIX+owl%3A+%3Chttp%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23%3E%0D%0APREFIX+meshv%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2Fvocab%23%3E%0D%0APREFIX+mesh%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F%3E%0D%0APREFIX+mesh2015%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2015%2F%3E%0D%0APREFIX+mesh2016%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2016%2F%3E%0D%0APREFIX+mesh2017%3A+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%2F2017%2F%3E%0D%0A%0D%0A+SELECT+DISTINCT+%3Fdescriptor+%3Flabel%0D%0A+FROM+%3Chttp%3A%2F%2Fid.nlm.nih.gov%2Fmesh%3E%0D%0A%0D%0A+WHERE+%7B%0D%0A+++mesh%3AD009369+meshv%3AtreeNumber+%3FtreeNum+.%0D%0A+++%3FchildTreeNum+meshv%3AparentTreeNumber%2B+%3FtreeNum+.%0D%0A+++%3Fdescriptor+meshv%3AtreeNumber+%3FchildTreeNum+.%0D%0A+++%3Fdescriptor+rdfs%3Alabel+%3Flabel+.%0D%0A+%7D%0D%0A+%0D%0A+ORDER+BY+%3Flabel%0D%0A%0D%0A%23Descendants+of+Neoplasms+%28D009369%29%0D%0A&format=HTML&inference=true&year=current&limit=50&offset=0#lodestart-sparql-results">Get all MeSH Descriptors that fall under Neoplasms</a>.</li> <li>Download all <a href="https://nlmpubs.nlm.nih.gov/projects/mesh/rdf/mesh.nt.gz">MeSH RDF triples in one file</a>. </li> </ul> <p>To provide feedback, please visit us on <a href="https://github.com/HHS/meshrdf/issues">GitHub</a>.</p> </div> <div class="col-md-6 col-sm-8"> <h3 class="meshrdf-resources-header">MeSH RDF Resources</h3> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="https://nlmpubs.nlm.nih.gov/projects/mesh/rdf/">Download</a></h4> </div> <div class="col-md-6"> <p>Download MeSH in RDF N-Triples format (mesh.nt.gz).</p> </div> </div> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="/mesh/query">SPARQL Query Editor</a></h4> </div> <div class="col-md-6"> <p>Query MeSH using SPARQL. See our <a href="https://hhs.github.io/meshrdf/sample-queries">sample queries</a>.</p> </div> </div> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="/mesh/swagger/ui">API</a></h4> </div> <div class="col-md-6"> <p>Retrieve RDF URIs for specific MeSH descriptors or request data for specific MeSH identifiers.</p> </div> </div> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="/mesh/lookup">Lookup</a></h4> </div> <div class="col-md-6"> <p>Retrieve RDF URIs for specific MeSH descriptors.</p> </div> </div> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="https://hhs.github.io/meshrdf/">Documentation</a></h4> </div> <div class="col-md-6"> <p>Documentation includes <a href="https://hhs.github.io/meshrdf/sample-queries">sample queries</a>, MeSH data model diagrams and more.</p> </div> </div> <div class="row meshrdf-resource-item"> <div class="col-md-6"> <h4><a href="https://support.nlm.nih.gov/?category=MeSH&from=https://id.nlm.nih.gov/mesh/">Support</a></h4> </div> <div class="col-md-6"> <p>Visit our <a href="https://github.com/HHS/meshrdf/issues">GitHub</a> repository and submit an issue or contact <a href="https://support.nlm.nih.gov/?category=MeSH&from=https://id.nlm.nih.gov/mesh/">NLM Customer Support</a>.</p> </div> </div> </div> </div> <div class="footer"> <div id="jserr" style="display: none"> <p>JavaScript Errors:</p> <pre></pre> </div> <hr> <footer> <div class="row"> <div class="col-md-5 small"> U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda, MD 20894 <br> <a href="http://www.nih.gov/">National Institutes of Health</a>, <a href="http://www.hhs.gov/">Health & Human Services</a> <br> <a href="https://www.nlm.nih.gov/web_policies.html">Web Policies</a>, <a href="http://www.nih.gov/icd/od/foia/index.htm">FOIA</a>, <a href="https://www.hhs.gov/vulnerability-disclosure-policy/index.html">HHS Vulnerability Disclosure</a> <br> <a href="https://www.nlm.nih.gov/accessibility.html">Accessibility</a>, <a href="https://support.nlm.nih.gov/?category=MeSH&from=https://id.nlm.nih.gov/mesh/">Contact Us</a> </div> <div class="col-md-2"> <a href="https://www.usa.gov/"> <img src="https://www.nlm.nih.gov/images/usagov_logo.gif" alt="USA.gov logo"/> </a> </div> <div class="col-md-5 small"> <span class="version"> Version 1.1.18 </span> </div> </div> </footer> </div> </div> </div> </div> </body> </html>

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