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<!DOCTYPE html> <html class="client-nojs" lang="en" dir="ltr"> <head> <meta charset="UTF-8"/> <title>Quality Control - GO Wiki</title> <script>document.documentElement.className="client-js";RLCONF={"wgBreakFrames":false,"wgSeparatorTransformTable":["",""],"wgDigitTransformTable":["",""],"wgDefaultDateFormat":"dmy","wgMonthNames":["","January","February","March","April","May","June","July","August","September","October","November","December"],"wgRequestId":"Z0OA6C_o6qDY40uXybq8mQAAAF0","wgCSPNonce":false,"wgCanonicalNamespace":"","wgCanonicalSpecialPageName":false,"wgNamespaceNumber":0,"wgPageName":"Quality_Control","wgTitle":"Quality Control","wgCurRevisionId":82368,"wgRevisionId":82368,"wgArticleId":8636,"wgIsArticle":true,"wgIsRedirect":false,"wgAction":"view","wgUserName":null,"wgUserGroups":["*"],"wgCategories":["Quality 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role="main"> <a id="top"></a> <div id="siteNotice"></div> <div class="mw-indicators"> </div> <h1 id="firstHeading" class="firstHeading mw-first-heading"><span class="mw-page-title-main">Quality Control</span></h1> <div id="bodyContent" class="vector-body"> <div id="siteSub" class="noprint">From GO Wiki</div> <div id="contentSub"><div id="mw-content-subtitle"></div></div> <div id="contentSub2"></div> <div id="jump-to-nav"></div> <a class="mw-jump-link" href="#mw-head">Jump to navigation</a> <a class="mw-jump-link" href="#searchInput">Jump to search</a> <div id="mw-content-text" class="mw-body-content mw-content-ltr" lang="en" dir="ltr"><div class="mw-parser-output"><div id="toc" class="toc" role="navigation" aria-labelledby="mw-toc-heading"><input type="checkbox" role="button" id="toctogglecheckbox" class="toctogglecheckbox" style="display:none" /><div class="toctitle" lang="en" dir="ltr"><h2 id="mw-toc-heading">Contents</h2><span class="toctogglespan"><label class="toctogglelabel" for="toctogglecheckbox"></label></span></div> <ul> <li class="toclevel-1 tocsection-1"><a href="#Objective"><span class="tocnumber">1</span> <span class="toctext">Objective</span></a></li> <li class="toclevel-1 tocsection-2"><a href="#Group_Leaders"><span class="tocnumber">2</span> <span class="toctext">Group Leaders</span></a></li> <li class="toclevel-1 tocsection-3"><a href="#Communication"><span class="tocnumber">3</span> <span class="toctext">Communication</span></a> <ul> <li class="toclevel-2 tocsection-4"><a href="#Conference_call_agendas_and_minutes"><span class="tocnumber">3.1</span> <span class="toctext">Conference call agendas and minutes</span></a></li> <li class="toclevel-2 tocsection-5"><a href="#High_level_objectives"><span class="tocnumber">3.2</span> <span class="toctext">High level objectives</span></a></li> <li class="toclevel-2 tocsection-6"><a href="#Ideas_from_GOC_Meetings"><span class="tocnumber">3.3</span> <span class="toctext">Ideas from GOC Meetings</span></a></li> </ul> </li> <li class="toclevel-1 tocsection-7"><a href="#Annotation_Quality_Control"><span class="tocnumber">4</span> <span class="toctext">Annotation_Quality_Control</span></a></li> <li class="toclevel-1 tocsection-8"><a href="#Ontology_Quality_Control"><span class="tocnumber">5</span> <span class="toctext">Ontology Quality_Control</span></a></li> </ul> </div> <h1><span class="mw-headline" id="Objective">Objective</span></h1> <p>The GO Quality Control group aims to identify any issues that may negatively impact the quality of the products developed by the GOC. The group was formed in October 2017. </p> <h1><span class="mw-headline" id="Group_Leaders">Group Leaders</span></h1> <p>Pascale Gaudet (GOC), Kimberly Van Auken (WB), Sylvain Poux (Swiss-Prot), Val Wood (PomBase) </p> <h1><span class="mw-headline" id="Communication">Communication</span></h1> <p>The groups meets on an irregular basis. </p><p><br /> </p> <h2><span class="mw-headline" id="Conference_call_agendas_and_minutes">Conference call agendas and minutes</span></h2> <ul><li><a href="/QCQA_next_call" title="QCQA next call">QCQA_next_call</a></li> <li><a href="/QCQA_call_2019-06-25" title="QCQA call 2019-06-25">QCQA call 2019-06-25</a></li> <li><a href="/QCQA_call_2019-06-09" title="QCQA call 2019-06-09">QCQA call 2019-06-09</a></li> <li><a href="/QCQA_call_2019-05-14" title="QCQA call 2019-05-14">QCQA call 2019-05-14</a></li> <li><a href="/QCQA_call_2019-03-26" title="QCQA call 2019-03-26">QCQA call 2019-03-26</a></li> <li><a href="/QCQA_call_2019-03-05" title="QCQA call 2019-03-05">QCQA call 2019-03-05</a></li> <li><a href="/QCQA_call_2018-11-27" title="QCQA call 2018-11-27">QCQA call 2018-11-27</a></li> <li><a href="/QCQA_call_2018-11-20" title="QCQA call 2018-11-20">QCQA call 2018-11-20</a></li> <li><a href="/QCQA_call_2018-11-13" title="QCQA call 2018-11-13">QCQA call 2018-11-13</a></li> <li><a href="/QCQA_call_2018-11-01" title="QCQA call 2018-11-01">QCQA call 2018-11-01</a></li> <li><a href="/QCQA_call_2018-10-02" title="QCQA call 2018-10-02">QCQA call 2018-10-02</a></li> <li><a href="/QCQA_call_2018-08-21" title="QCQA call 2018-08-21">QCQA_call_2018-08-21</a></li> <li><a href="/QCQA_call_2018-08-14" title="QCQA call 2018-08-14">QCQA_call_2018-08-14</a></li> <li><a href="/QCQA_call_2018-03-20" title="QCQA call 2018-03-20">QCQA_call_2018-03-20</a></li> <li><a href="/QCQA_call_2017-11-29" title="QCQA call 2017-11-29">QCQA_call_2017-11-29</a></li> <li><a href="/QCQA_discussion_GOC_meeting_Cambridge_2017-10" title="QCQA discussion GOC meeting Cambridge 2017-10">QCQA discussion GOC meeting Cambridge 2017-10</a></li></ul> <h2><span class="mw-headline" id="High_level_objectives">High level objectives</span></h2> <ol><li>Implement rules on annotations (on GAF and GO-CAM export files)</li> <li>Consistency among annotations for homologous genes</li> <li>Analysis of co-annotation of different GO terms to the same gene</li> <li>Competency questions</li></ol> <h2><span class="mw-headline" id="Ideas_from_GOC_Meetings">Ideas from GOC Meetings</span></h2> <ul><li>Objective: Define a new format for annotation consistency exercises.</li> <li>Suggestions from Corvallis GOC meeting: <ul><li>Kimberly: Perhaps have specialized focus groups.</li> <li>Suzi/Judy: Blog for describing case studies</li> <li>Ruth: Define what information should be included in annotation documentation (e.g. a flowchart)</li> <li>David: Have invited guest annotators</li> <li>Helen: paper-by-paper has run its course (as KvA said). Move discussion to pathways that are shared between species. Work out the hard stuff, conventional pathways (e.g. the cancer pathways)</li> <li>Sabrina: Walk through a Noctua model to explain the thought process the curator went through (useful for neophyte curators)</li> <li>Ruth:have working groups publish papers with their conclusions</li> <li>Moni: In addition to blogs have the annotation group contribute training materials (e.g. short videos)</li></ul></li></ul> <p><br /> </p> <h1><span class="mw-headline" id="Annotation_Quality_Control">Annotation_Quality_Control</span></h1> <p><a href="/Annotation#Annotation_quality_control" title="Annotation"> Annotation quality control procedures</a> </p> <h1><span class="mw-headline" id="Ontology_Quality_Control">Ontology Quality_Control</span></h1> <p>To be documented </p>    </div> <div class="printfooter" data-nosnippet="">Retrieved from "<a dir="ltr" href="https://wiki.geneontology.org/index.php?title=Quality_Control&oldid=82368">https://wiki.geneontology.org/index.php?title=Quality_Control&oldid=82368</a>"</div></div> <div id="catlinks" class="catlinks" data-mw="interface"><div id="mw-normal-catlinks" class="mw-normal-catlinks"><a href="/Special:Categories" title="Special:Categories">Category</a>: <ul><li><a href="/Category:Quality_Control" title="Category:Quality Control">Quality Control</a></li></ul></div></div> </div> </div> <div id="mw-navigation"> <h2>Navigation menu</h2> <div id="mw-head"> <nav id="p-personal" class="vector-menu mw-portlet mw-portlet-personal vector-user-menu-legacy" aria-labelledby="p-personal-label" role="navigation" > <h3 id="p-personal-label" class="vector-menu-heading " > <span class="vector-menu-heading-label">Personal tools</span> </h3> <div class="vector-menu-content"> <ul class="vector-menu-content-list"><li id="pt-login" class="mw-list-item"><a href="/index.php?title=Special:UserLogin&returnto=Quality+Control" title="You are encouraged to log in; however, it is not mandatory [o]" accesskey="o"><span>Log in</span></a></li></ul> </div> </nav> <div id="left-navigation"> <nav id="p-namespaces" class="vector-menu mw-portlet mw-portlet-namespaces vector-menu-tabs vector-menu-tabs-legacy" aria-labelledby="p-namespaces-label" role="navigation" > <h3 id="p-namespaces-label" class="vector-menu-heading " > <span class="vector-menu-heading-label">Namespaces</span> </h3> <div class="vector-menu-content"> <ul class="vector-menu-content-list"><li id="ca-nstab-main" class="selected mw-list-item"><a href="/Quality_Control" title="View the content page [c]" accesskey="c"><span>Page</span></a></li><li id="ca-talk" class="new mw-list-item"><a href="/index.php?title=Talk:Quality_Control&action=edit&redlink=1" rel="discussion" title="Discussion about the content page (page does not exist) [t]" accesskey="t"><span>Discussion</span></a></li></ul> </div> </nav> <nav id="p-variants" class="vector-menu mw-portlet mw-portlet-variants emptyPortlet vector-menu-dropdown" aria-labelledby="p-variants-label" role="navigation" > <input type="checkbox" id="p-variants-checkbox" role="button" aria-haspopup="true" data-event-name="ui.dropdown-p-variants" class="vector-menu-checkbox" aria-labelledby="p-variants-label" /> <label id="p-variants-label" aria-label="Change language variant" class="vector-menu-heading " > <span class="vector-menu-heading-label">English</span> </label> <div class="vector-menu-content"> <ul class="vector-menu-content-list"></ul> </div> </nav> </div> <div id="right-navigation"> <nav id="p-views" class="vector-menu mw-portlet mw-portlet-views vector-menu-tabs vector-menu-tabs-legacy" aria-labelledby="p-views-label" role="navigation" > <h3 id="p-views-label" class="vector-menu-heading " > <span class="vector-menu-heading-label">Views</span> </h3> <div class="vector-menu-content"> <ul class="vector-menu-content-list"><li id="ca-view" class="selected mw-list-item"><a href="/Quality_Control"><span>Read</span></a></li><li id="ca-viewsource" class="mw-list-item"><a href="/index.php?title=Quality_Control&action=edit" title="This page is protected.
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