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type="application/ld+json">{"@context":"https://schema.org/","@type":"DataSet","@id":"https://www.expasy.org/","http://purl.org/dc/terms/conformsTo":{"@id":"https://bioschemas.org/profiles/Dataset/1.0-RELEASE","@type":"CreativeWork"},"name":"Expasy","description":"Expasy is the bioinformatics resource portal of the SIB Swiss Institute of Bioinformatics.","url":"https://www.expasy.org/","identifier":"https://doi.org/10.25504/FAIRsharing.ceeffa","thumbnailUrl":"https://www.expasy.org/images/expasy-homepage.png","keywords":"bioinformatics, registry, resource, database, tool, SIB, Swiss, Swiss Institute of Bioinformatics","isAccessibleForFree":true,"potentialAction":{"@type":"SearchAction","target":"https://www.expasy.org/search/{search_term_string}?type=keyword","query-input":"required name=search_term_string"},"citation":{"@type":"ScholarlyArticle","name":"Expasy, the Swiss Bioinformatics Resource Portal, as designed by its 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Bioinformatics Resource Portal" class="inline-block"></div></a> <nav role="navigation" class="max-sm:w-full"><ul class="nav"><li class="inline-block"><a href="/" class="nav__link nuxt-link-active"> Home </a></li> <li class="inline-block"><a href="/about" class="nav__link"> About </a></li> <li class="inline-block"><a href="https://www.sib.swiss/about/news" target="_blank" rel="noopener noreferer" class="nav__link"> SIB News </a></li> <li class="inline-block"><a href="/contact" class="nav__link"> Contact </a></li></ul></nav></div></header> <main role="main" class="page-main flex-grow"><div class="container container--xs"><form action="/search" method="get" class="search"><div class="text-center"><img src="/images/expasy-homepage.png" srcset="/images/expasy-homepage.png, /images/expasy-homepage@2x.png 2x" alt="Expasy: Swiss Bioinformatics Resource Portal" class="mb-8 inline-block md:hidden"></div> <div class="flex mb-1"><label for="search" class="inline-block h4 mb-2 sr-only"> Explore high-quality biological data resources </label> <input id="search" name="search" type="search" required="required" class="field search__input"> <button type="submit" class="btn search__submit"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--search icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#search"></use></svg></button></div> <div class="text-sm"> e.g. <a href="/search/blast">BLAST</a>, <a href="/search/uniprot">UniProt</a>, <a href="/search/msh6">MSH6</a>, <a href="/search/albumin">Albumin</a>... </div> </form></div> <div class="container"><div class="resource-page"><div class="flex-grid flex-grid--md flex-grid--even"><div class="lg:w-2/3 xl:w-3/4 flex-grid__item w-full"><section class="flex flex-col pt-5 max-md:pb-5 border-neutral-200 border-t"><div class="flex-auto"><div class="mb-3 md:flex md:items-center"><div class="md:flex-1"><h1 class="mb-5"> MELANIE </h1></div> <ul aria-label="Resource categories and types" class="resource-page__filters"><li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="text-primary-500 icon icon--protein icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <div class="flex-1"> Proteins & Proteomes </div></li> <li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <div class="flex-1"> Software tool </div></li></ul></div> <div class="mb-8">Melanie combines a unique and flexible interface for the visualization, exploration and analysis of 2D gel and blot images. The software allows differential protein expression analysis of conventional 2-DE and 2D-DIGE gels, to detect protein abundance changes for biomarker discovery. It also features dedicated functionality for Host Cell Protein (HCP) antibody coverage analysis to support development of immunoassays for HCP detection in biopharmaceuticals.</div> <div class="flex flex-col items-start gap-8 lg:items-center lg:gap-12 lg:flex-row"><div class="flex items-start justify-center lg:justify-start"><a href="https://2d-gel-analysis.com" target="_blank" rel="noopener noreferer" class="btn btn--primary"> Browse the resource website </a></div> <div class="flex flex-col items-start gap-3"> <div><a href="https://2d-gel-analysis.com/documentation/" target="_blank" rel="noopener noreferer" class="flex items-center gap-2 no-underline"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--book icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#book"></use></svg> <span>Read the documentation</span></a></div> </div></div></div> <footer class="p-5 resource-page__info bg-neutral-100 border-neutral-200 border-t border-b"><div><p>Developed by the <a target="_blank" rel="noopener noreferrer nofollow" href="https://www.sib.swiss/clinical-bioinformatics" tt-mode="url">Clinical Bioinformatics group</a>.</p></div> </footer></section></div> <aside class="lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><div class="resource-page__ontologie"><section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> What you can do with this resource </h2> <ul><li class="inline-block"><a href="/search/Image%20analysis?type=keyword"> Image analysis </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20quantification?type=keyword"> Protein quantification </a><span>,聽</span></li><li class="inline-block"><a href="/search/Differential%20protein%20expression%20profiling?type=keyword"> Differential protein expression profiling </a><span>,聽</span></li><li class="inline-block"><a href="/search/Expression%20analysis?type=keyword"> Expression analysis </a></li></ul></section> <section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> Browse these keywords in Expasy </h2> <ul><li class="inline-block"><a href="/search/2D%20PAGE%20image?type=keyword"> 2D PAGE image </a><span>,聽</span></li><li class="inline-block"><a href="/search/Data%20visualisation?type=keyword"> Data visualisation </a><span>,聽</span></li><li class="inline-block"><a href="/search/Biomarkers?type=keyword"> Biomarkers </a><span>,聽</span></li><li class="inline-block"><a href="/search/Medicine?type=keyword"> Medicine </a><span>,聽</span></li><li class="inline-block"><a href="/search/Proteomics%20experiment?type=keyword"> Proteomics experiment </a><span>,聽</span></li><li class="inline-block"><a href="/search/TIFF?type=keyword"> TIFF </a><span>,聽</span></li><li class="inline-block"><a href="/search/Workflows?type=keyword"> Workflows </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20modifications?type=keyword"> Protein modifications </a><span>,聽</span></li><li class="inline-block"><a href="/search/Medicine?type=keyword"> Medicine </a><span>,聽</span></li><li class="inline-block"><a href="/search/Proteomics%20experiment?type=keyword"> Proteomics experiment </a><span>,聽</span></li><li class="inline-block"><a href="/search/TIFF?type=keyword"> TIFF </a><span>,聽</span></li><li class="inline-block"><a href="/search/Workflows?type=keyword"> Workflows </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20modifications?type=keyword"> Protein modifications </a></li></ul></section></div></aside></div></div> <section class="py-5 mt-10 border-neutral-200 border-t"><h2 class="mb-5 h3"> You might also be interested in </h2> <ul class="flex-grid flex-grid--multiline flex-grid--even"><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" 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class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/proc" class="resource__link"><h3 class="h5"> pROC </h3></a> <div class="text-sm leading-snug mt-1"> Visualize, smooth and compare ROC curves </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/nextstrain" class="resource__link"><h3 class="h5"> Nextstrain </h3></a> <div class="text-sm leading-snug mt-1"> Impact of pathogen genome data on science and public health </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 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items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/peptidecutter" class="resource__link"><h3 class="h5"> PeptideCutter </h3></a> <div class="text-sm leading-snug mt-1"> Potential cleavage sites in a protein </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/uniprot-clustalo" class="resource__link"><h3 class="h5"> UniProt ClustalO </h3></a> <div class="text-sm leading-snug mt-1"> Align two or more protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 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class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swiss-mass-abacus" class="resource__link"><h3 class="h5"> Swiss Mass Abacus </h3></a> <div class="text-sm leading-snug mt-1"> Intuitive calculator of peptide and glycopeptide masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sugarsketcher" class="resource__link"><h3 class="h5"> SugarSketcher </h3></a> <div class="text-sm leading-snug mt-1"> Fast, intuitive, SNFG-compliant glycan structure drawing </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/sugarbind" class="resource__link"><h3 class="h5"> SugarBind </h3></a> <div class="text-sm leading-snug mt-1"> Pathogen Sugar-Binding Database </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glynsight" class="resource__link"><h3 class="h5"> Glynsight </h3></a> <div class="text-sm leading-snug mt-1"> Visualise and compare glycan expression profiles </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycositealign" class="resource__link"><h3 class="h5"> GlycoSiteAlign </h3></a> <div class="text-sm leading-snug mt-1"> Multiple alignment of sequences around glycosylation sites </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect" class="resource__link"><h3 class="h5"> GlyConnect </h3></a> <div class="text-sm leading-snug mt-1"> Integrated data platform to study glycosylation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycodigest" class="resource__link"><h3 class="h5"> GlycoDigest </h3></a> <div class="text-sm leading-snug mt-1"> In silico digestion of glycans by exoglycosidases </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sulfinator" class="resource__link"><h3 class="h5"> Sulfinator </h3></a> <div class="text-sm leading-snug mt-1"> Predict tyrosine sulfation sites in protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/peptidemass" class="resource__link"><h3 class="h5"> PeptideMass </h3></a> <div class="text-sm leading-snug mt-1"> Theoretical protein cleavage by a given enzyme </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/myristoylator" class="resource__link"><h3 class="h5"> Myristoylator </h3></a> <div class="text-sm leading-snug mt-1"> N-terminal myristoylation of proteins by neural networks </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycomod" class="resource__link"><h3 class="h5"> GlycoMod </h3></a> <div class="text-sm leading-snug mt-1"> Possible oligosaccharide structures on proteins from masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findpept" class="resource__link"><h3 class="h5"> FindPept </h3></a> <div class="text-sm leading-snug mt-1"> Unspecific protein cleavage from experimental masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findmod" class="resource__link"><h3 class="h5"> FindMod </h3></a> <div class="text-sm leading-snug mt-1"> Potential PTMs and single amino acid substitutions </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyco-expasy" class="resource__link"><h3 class="h5"> Glyco@Expasy </h3></a> <div class="text-sm leading-snug mt-1"> Zooming in on web-based glycoinformatics resources </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect-sparql-endpoint" class="resource__link"><h3 class="h5"> GlyConnect SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to GlyConnect </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycoql" class="resource__link"><h3 class="h5"> GlycoQL </h3></a> <div class="text-sm leading-snug mt-1"> Match a glycan substructure to a database of full structures </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/venom-zone" class="resource__link"><h3 class="h5"> VenomZone </h3></a> <div class="text-sm leading-snug mt-1"> Portal to venom protein UniProtKB entries </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Transcriptomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/asap" class="resource__link"><h3 class="h5"> ASAP </h3></a> <div class="text-sm leading-snug mt-1"> Web-based, cooperative portal for single-cell data analyses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--text-mining icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#text-mining"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Text mining & Machine learning </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sibils" class="resource__link"><h3 class="h5"> SIBiLS </h3></a> <div class="text-sm leading-snug mt-1"> Personalized information retrieval from the literature </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/nextclade" class="resource__link"><h3 class="h5"> Nextclade </h3></a> <div class="text-sm leading-snug mt-1"> Clade assignment, mutation calling & QC for virus sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Population genetics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/v-pipe" class="resource__link"><h3 class="h5"> V-pipe </h3></a> <div class="text-sm leading-snug mt-1"> Viral genomics pipeline </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/raxmlgui" class="resource__link"><h3 class="h5"> raxmlGUI </h3></a> <div class="text-sm leading-snug mt-1"> raxmlGUI 2.0 is a graphical user interface to RAxML </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural Biology </li><li class="inline-block sr-only"><span>, </span> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swiss-model-workspace" class="resource__link"><h3 class="h5"> SWISS-MODEL Workspace </h3></a> <div class="text-sm leading-snug mt-1"> Fully automated protein structure homology-modeling server </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hamap" class="resource__link"><h3 class="h5"> HAMAP </h3></a> <div class="text-sm leading-snug mt-1"> UniProtKB family classification and annotation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genes & Genomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/realphy" class="resource__link"><h3 class="h5"> REALPHY </h3></a> <div class="text-sm leading-snug mt-1"> Inference of phylogenetic trees from genome data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Population genetics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/v-pipe-sars-cov-2" class="resource__link"><h3 class="h5"> V-pipe SARS-CoV-2 </h3></a> <div class="text-sm leading-snug mt-1"> V-pipe pipeline for SARS-CoV-2 sequencing data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/shorah" class="resource__link"><h3 class="h5"> ShoRAH </h3></a> <div class="text-sm leading-snug mt-1"> Analysis of NGS data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/openstructure" class="resource__link"><h3 class="h5"> OpenStructure </h3></a> <div class="text-sm leading-snug mt-1"> Molecular modelling and visualisation environment </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Metagenomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/lemmi" class="resource__link"><h3 class="h5"> LEMMI </h3></a> <div class="text-sm leading-snug mt-1"> Continuous benchmarking of methods for metagenomics </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Medicinal chemistry </li><li class="inline-block sr-only"><span>, </span> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swissparam" class="resource__link"><h3 class="h5"> SwissParam </h3></a> <div class="text-sm leading-snug mt-1"> Topology and parameters for small molecules </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/cameo" class="resource__link"><h3 class="h5"> CAMEO </h3></a> <div class="text-sm leading-snug mt-1"> Weekly automated benchmarking of protein structure modelling </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li><li class="inline-block sr-only"><span>, </span> Transcriptomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/ismara" class="resource__link"><h3 class="h5"> ISMARA </h3></a> <div class="text-sm leading-snug mt-1"> Webservice for gene expression and epigenetic data analysis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genes & Genomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/crema" class="resource__link"><h3 class="h5"> CREMA </h3></a> <div class="text-sm leading-snug mt-1"> Cis-Regulatory Element Motif Activities </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li><li class="inline-block sr-only"><span>, </span> Transcriptomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/crunch" class="resource__link"><h3 class="h5"> CRUNCH </h3></a> <div class="text-sm leading-snug mt-1"> Automated pipeline for ChIP-seq data analysis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/phylogibbs" class="resource__link"><h3 class="h5"> Phylogibbs </h3></a> <div class="text-sm leading-snug mt-1"> Regulatory sites in a collection of DNA sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" 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The tool can process N- or O-linked glycan expression data.",media_url:a,group_info:$},{id:df,title:dg,slug:dh,pinned:e,types:[{id:c,icon:c,title:g}],url:di,documentation_url:a,tutorial_url:a,short_description:dj,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dk,updated_at:dl,description:"GlycoSiteAlign selectively aligns amino acid sequences surrounding glycosylation sites (by default, 20 positions on each side of the glycosylated residue) depending on structural properties of the glycan attached to the site. These properties are either general (e.g., \"fucosylated\") or specific, such as precise composition, and are proposed in a drop-down list.",media_url:a,group_info:$},{id:dm,title:dn,slug:do0,pinned:e,types:[{id:d,icon:d,title:n}],url:dp,documentation_url:dq,tutorial_url:dr,short_description:ds,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dt,updated_at:du,description:"GlyConnect is a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. The purpose of GlyConnect is to bring out in a single resource the relationships between glycans, the proteins that carry them, the enzymes that synthesise or degrade them and the proteins that bind them. \u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\nThis resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" rel=\"noopener noreferrer nofollow\"\u003EProteome Informatics group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:dv,title:dw,slug:dx,pinned:e,types:[{id:c,icon:c,title:g}],url:dy,documentation_url:a,tutorial_url:a,short_description:dz,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:dA,updated_at:dB,description:"GlycoDigest is a tool that simulates the action of these exoglycosidases on released oligosaccharides. It assists glycobiologists in designing enzyme mixtures that can be used to guide the precise determination of glycan structures.",media_url:a,group_info:$},{id:dC,title:dD,slug:dE,pinned:e,types:[{id:c,icon:c,title:g}],url:dF,documentation_url:dG,tutorial_url:a,short_description:dH,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dI,updated_at:dJ,description:"The Sulfinator is a software tool able to predict tyrosine sulfation sites in protein sequences. It employs four different Hidden Markov Models that were built to recognise sulfated tyrosine residues located N-terminally, within sequence windows of more than 25 amino acids and C-terminally, as well as sulfated tyrosines clustered within 25 amino acid windows, respectively. All four HMMs contain the distilled information from one multiple sequence alignment.",media_url:a,group_info:ah},{id:dK,title:dL,slug:dM,pinned:e,types:[{id:c,icon:c,title:g}],url:dN,documentation_url:dO,tutorial_url:a,short_description:dP,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dQ,updated_at:dR,description:"Cleave a protein sequence with a chosen enzyme\u002Fprotease, and computes the masses of the generated peptides. The tool also returns theoretical isoelectric point and mass values for the protein of interest. If desired, PeptideMass can return the mass of peptides known to carry post-translational modifications, and can highlight peptides whose masses may be affected by database conflicts, polymorphisms or splice variants.",media_url:a,group_info:ah},{id:dS,title:dT,slug:dU,pinned:e,types:[{id:c,icon:c,title:g}],url:dV,documentation_url:dW,tutorial_url:a,short_description:dX,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dY,updated_at:dZ,description:"Predict N-terminal myristoylation of proteins by neural networks. Myristoylator uses ensembles of neural networks, in order to learn to discriminate positive and negative sequences for N-myristoylation.",media_url:a,group_info:ah},{id:d_,title:d$,slug:ea,pinned:e,types:[{id:c,icon:c,title:g}],url:eb,documentation_url:a,tutorial_url:a,short_description:ec,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:ed,updated_at:ee,description:"Predict possible oligosaccharide structures that occur on proteins from their experimentally determined masses. The program can be used for free or derivatized oligosaccharides and for glycopeptides.",media_url:a,group_info:"\u003Cp\u003EHosted by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:ef,title:eg,slug:eh,pinned:e,types:[{id:c,icon:c,title:g}],url:ei,documentation_url:ej,tutorial_url:a,short_description:ek,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:el,updated_at:em,description:"Identify peptides that result from unspecific cleavage of proteins from their experimental masses, taking into account artefactual chemical modifications, post-translational modifications (PTM) and protease autolytic cleavage.",media_url:a,group_info:ah},{id:en,title:eo,slug:ep,pinned:e,types:[{id:c,icon:c,title:g}],url:eq,documentation_url:er,tutorial_url:a,short_description:es,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:et,updated_at:eu,description:"Predict potential protein post-translational modifications (PTM) and find potential single amino acid substitutions in peptides. The experimentally measured peptide masses are compared with the theoretical peptides calculated from a specified Swiss-Prot\u002FTrEMBL entry or from a user-entered sequence, and mass differences are used to better characterise the protein of interest.",media_url:a,group_info:ah},{id:ev,title:ew,slug:ex,pinned:S,types:[{id:d,icon:d,title:n}],url:ey,documentation_url:a,tutorial_url:a,short_description:ez,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eA,updated_at:eB,description:"Glyco@Expasy centralizes web-based glycoinformatics resources developed within an international network of glycoscientists. The philosophy is that it should be {glycoscientist AND protein scientist}鈥揻riendly with the aim of (1) popularizing the use of bioinformatics in glycobiology and (2) emphasizing the relationship between glycobiology and protein-oriented bioinformatics resources. Glyco@Expasy was designed with glycoscientists to meet the growing needs of the community for glycoinformatics.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=Vhm9WKq7LM8",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" rel=\"noopener noreferrer nofollow\"\u003EProteome Informatics group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:eC,title:eD,slug:eE,pinned:e,types:[{id:d,icon:d,title:n}],url:eF,documentation_url:a,tutorial_url:a,short_description:eG,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eH,updated_at:eI,description:"SPARQL access to GlyConnect, a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. The purpose of GlyConnect is to bring out in a single resource the relationships between glycans, the proteins that carry them, the enzymes that synthesise or degrade them and the proteins that bind them.",media_url:a,group_info:$},{id:eJ,title:eK,slug:eL,pinned:e,types:[{id:c,icon:c,title:g}],url:eM,documentation_url:a,tutorial_url:a,short_description:eN,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:as,updated_at:as,description:"GlycoQL (previously GlyS3) matches any substructure such as glycan determinants to a large collection of structures recorded in Glyconnect or SugarBind.",media_url:a,group_info:$},{id:ar,title:eO,slug:eP,pinned:e,types:[{id:d,icon:d,title:n}],url:eQ,documentation_url:eR,tutorial_url:a,short_description:eS,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:eT,description:"VenomZone is a free web resource that provides information on venoms from six animal taxa (snakes, scorpions, spiders, cone snails, sea anemones and insects), as well as on their targets. Information can be browsed through pages on taxonomy, activity and venom protein families and all these pages link to related venom\u002Ftoxin protein information from the manually curated UniProtKB\u002FSwiss-Prot database.",media_url:a,group_info:aA},{id:eU,title:eV,slug:eW,pinned:S,types:[{id:c,icon:c,title:g}],url:eX,documentation_url:a,tutorial_url:eY,short_description:eZ,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:q,title:A,icon:l,children:[]}],created_at:e_,updated_at:e$,description:"ASAP (Automated Single-cell Analysis Portal) is a web-based, collaborative portal aimed at rendering single-cell 'omics data analyses more accessible to researchers. No installation is required and standardized analyses can be run in minutes without requiring significant computing power.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 ASAP features the single-cell transcriptomes for the Human Cell Atlas and the Fly Cell Atlas.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=OjFamgLC_8M",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fbart-deplancke-group\" rel=\"noopener noreferrer nofollow\"\u003ELaboratory of Systems Biology and Genetics (LSBG) group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:fa,title:fb,slug:fc,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fd,documentation_url:a,tutorial_url:a,short_description:fe,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:ff,updated_at:fg,description:"SIBiLS (Swiss Institute of Bioinformatics Literature Services) provide personalized information retrieval from the biological literature. SIBiLS allow fully customizable search in semantically enriched contents, based on keywords, and\u002For mapped biomedical entities from a growing set of standardized and legacy vocabularies. Built on modern technologies scalable to big data, SIBiLS are freely accessible via REST APIs and are ready to empower any curation workflow.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=28ogsBJYgLQ",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fpatrick-ruch-group\" rel=\"noopener noreferrer nofollow\"\u003EText Mining group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fh,title:fi,slug:fj,pinned:e,types:[{id:c,icon:c,title:g}],url:fk,documentation_url:fl,tutorial_url:a,short_description:fm,license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:h,title:r,icon:l,children:[]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fn,updated_at:fo,description:"Nextclade aligns viral genomes to a reference sequence, calculates several quality control (QC) metrics, assigns sequences to a clade or variant, and identifies changes in the viral proteins relative to the reference sequence, enabling an easy, fast, and decentralized analysis of initial data. Nextclade is available as a command-line tool and as a web application with completely client based processing, meaning that sequence data doesn鈥檛 leave the user鈥檚 browser.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Frichard-neher-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EMicrobial Evolution group\u003C\u002Fu\u003E\u003C\u002Fa\u003E\u003Cu\u003E \u003C\u002Fu\u003Eand supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fp,title:fq,slug:fr,pinned:S,types:[{id:c,icon:c,title:g}],url:fs,documentation_url:ft,tutorial_url:fu,short_description:fv,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:fw,updated_at:fx,description:"V-pipe is the bioinformatics pipeline that integrates various open-source software packages for assessing viral genetic diversity from next-generation sequencing (NGS) data derived from intra-host virus populations.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 V-pipe enables reliable and comparable viral pathogen genomics and epidemiological studies and facilitates clinical diagnostics of viruses.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=qHEUVJZsgE4",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fy,title:fz,slug:fA,pinned:e,types:[{id:c,icon:c,title:g}],url:fB,documentation_url:fC,tutorial_url:a,short_description:fD,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fE,updated_at:fF,description:"raxmlGUI 2.0 seamlessly integrates RAxML and RAxML-NG binaries for all major operating systems with an intuitive graphical front鈥恊nd to setup and run phylogenetic analyses. It offers automated pipelines for analyses that require multiple calls of RAxML, built鈥恑n functions to concatenate alignment files, and one鈥恈lick model testing to select the best substitution models using ModelTest鈥怤G.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_self\" rel=\"nofollow noopener noreferrer\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdaniele-silvestro-group\" tt-mode=\"url\"\u003EComputational Evolutionary Paleobiology group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fG,title:fH,slug:fI,pinned:e,types:[{id:c,icon:c,title:g}],url:aJ,documentation_url:aK,tutorial_url:aL,short_description:fJ,license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:K,title:P,icon:F,children:[]}],created_at:fK,updated_at:fL,description:"SWISS-MODEL is a fully automated web based protein structure homology-modeling expert system. The SWISS-MODEL Workspace is a web-based integrated service which assists and guides the user in building protein homology models at different levels of complexity. A personal working environment (workspace), where several modelling projects can be carried out in parallel, is provided for each user.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ftorsten-schwede-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Structural Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:C,title:fM,slug:fN,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fO,documentation_url:fP,tutorial_url:a,short_description:fQ,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:fR,description:"HAMAP is a system for the classification and annotation of protein sequences. It consists of a collection of manually curated family profiles for protein classification, and associated, manually created annotation rules that specify annotations that apply to family members. HAMAP is applied to bacterial, archaeal and eukaryotic proteins and used to annotate records in UniProtKB via UniProt's automatic annotation pipeline. \u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\nThis resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fS,title:fT,slug:fU,pinned:e,types:[{id:c,icon:c,title:g}],url:fV,documentation_url:fW,tutorial_url:a,short_description:fX,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fY,updated_at:fZ,description:"REALPHY (Reference sequence Alignment based Phylogeny builder) is an online pipeline that infers phylogenetic trees from whole genome sequence data. The user only has to provide genome sequences in FASTA, GenBank or FASTQ formats. Phylogenetic trees are inferred using PhyML from these sequences. The alignments, tree files and information on SNPs and deleted sites are available for download after the analysis is finished.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:f_,title:f$,slug:ga,pinned:e,types:[{id:c,icon:c,title:g}],url:gb,documentation_url:gc,tutorial_url:gd,short_description:ge,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:gf,updated_at:gg,description:"Version of V-pipe specifically adapted to analyze high-throughput sequencing data of SARS-CoV-2. The V-pipe sars-cov2 branch is continuously updated with improvements and extensions, including on the visualization and reporting of results. \u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\nThis resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=pIby1UooK94",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EComputational Biology group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gh,title:gi,slug:gj,pinned:e,types:[{id:c,icon:c,title:g}],url:gk,documentation_url:a,tutorial_url:a,short_description:gl,license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:gm,updated_at:gn,description:"The software suite ShoRAH (Short Reads Assembly into Haplotypes) is used for the analysis of next generation sequencing data designed to analyse genetically heterogeneous samples. It can be used to provide error correction, haplotype reconstruction and estimation of the frequency of the different genetic variants present in a mixed sample.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Biology group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:go,title:gp,slug:gq,pinned:e,types:[{id:c,icon:c,title:g}],url:gr,documentation_url:gs,tutorial_url:gt,short_description:gu,license_type:a,categories:[{id:K,title:P,icon:F,children:[]}],created_at:gv,updated_at:gw,description:"The OpenStructure library project aims to provide an open-source, modular, flexible, molecular modelling and visualization environment. It is targeted at interested users and method developers in the field of structural bioinformatics. 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4.0","2022-04-14T10:31:12.000000Z","https:\u002F\u002Fswissmodel.expasy.org\u002F","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Fhelp","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Ftutorial","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E",21,"a free license for academic use. 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data","2020-06-22T12:31:58.000000Z","2023-06-02T08:17:49.000000Z",573,"Swiss Mass Abacus","swiss-mass-abacus","https:\u002F\u002Fglycoproteome.expasy.org\u002Fswiss-mass-abacus\u002F","Intuitive calculator of peptide and glycopeptide masses","2020-06-23T18:24:50.000000Z","2020-07-16T12:41:11.000000Z",574,"SugarSketcher","sugarsketcher","https:\u002F\u002Fglycoproteome.expasy.org\u002Fsugarsketcher\u002F","Fast, intuitive, SNFG-compliant glycan structure drawing","2020-06-24T09:20:48.000000Z","2020-07-16T12:21:24.000000Z",575,"SugarBind","sugarbind","https:\u002F\u002Fsugarbind.expasy.org","https:\u002F\u002Fsugarbind.expasy.org\u002Fhelp","Pathogen Sugar-Binding Database","2020-06-24T09:25:27.000000Z","2024-08-15T14:25:38.000000Z",607,"Glynsight","glynsight","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002F","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002Fabout","Visualise and compare glycan expression profiles","2020-06-26T17:15:21.000000Z","2024-08-16T13:52:43.000000Z",609,"GlycoSiteAlign","glycositealign","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycositealign\u002F","Multiple alignment of sequences around glycosylation sites","2020-06-26T17:29:46.000000Z","2020-07-16T12:22:46.000000Z",610,"GlyConnect","glyconnect","https:\u002F\u002Fglyconnect.expasy.org","https:\u002F\u002Fglyconnect.expasy.org\u002Fhelp","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=L9Zn-ji4RYY&t=2619s","Integrated data platform to study glycosylation","2020-06-26T17:50:15.000000Z","2024-11-26T12:11:27.000000Z",611,"GlycoDigest","glycodigest","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycodigest\u002F","In silico digestion of glycans by exoglycosidases","2020-06-26T17:54:21.000000Z","2020-07-16T12:08:34.000000Z",628,"Sulfinator","sulfinator","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002Fsulfinator-doc.html","Predict tyrosine sulfation sites in protein sequences","2020-06-30T16:11:29.000000Z","2025-02-19T12:34:19.000000Z",638,"PeptideMass","peptidemass","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002F","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002Fpeptide-mass-doc.html","Theoretical protein cleavage by a given enzyme","2020-06-30T17:44:47.000000Z","2025-02-19T16:06:10.000000Z",640,"Myristoylator","myristoylator","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002Fmyristoylator-doc.html","N-terminal myristoylation of proteins by neural networks","2020-06-30T17:55:49.000000Z","2025-02-20T13:58:48.000000Z",645,"GlycoMod","glycomod","https:\u002F\u002Fweb.expasy.org\u002Fglycomod\u002F","Possible oligosaccharide structures on proteins from masses","2020-06-30T18:28:43.000000Z","2023-09-28T07:24:17.000000Z",646,"FindPept","findpept","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002Ffindpept-doc.html","Unspecific protein cleavage from experimental masses","2020-06-30T18:33:26.000000Z","2025-02-19T13:55:07.000000Z",647,"FindMod","findmod","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002Ffindmod-doc.html","Potential PTMs and single amino acid substitutions","2020-07-01T09:34:57.000000Z","2025-02-19T12:47:21.000000Z",707,"Glyco@Expasy","glyco-expasy","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycomics-expasy\u002F","Zooming in on web-based glycoinformatics resources","2021-06-07T08:19:20.000000Z","2024-11-21T10:50:24.000000Z",721,"GlyConnect SPARQL endpoint","glyconnect-sparql-endpoint","https:\u002F\u002Fglyconnect.expasy.org\u002Frdf","SPARQL access to GlyConnect","2022-09-16T13:52:39.000000Z","2023-10-10T12:32:47.000000Z",741,"GlycoQL","glycoql","https:\u002F\u002Fglyconnect.expasy.org\u002Fglycoql\u002F","Match a glycan substructure to a database of full structures","VenomZone","venom-zone","https:\u002F\u002Fvenomzone.expasy.org\u002F","https:\u002F\u002Fvenomzone.expasy.org\u002F1877","Portal to venom protein UniProtKB entries","2025-02-13T15:59:26.000000Z",696,"ASAP","asap","https:\u002F\u002Fasap.epfl.ch\u002F","https:\u002F\u002Fasap.epfl.ch\u002Fhome\u002Ftutorial","Web-based, cooperative portal for single-cell data analyses","2020-11-16T15:15:41.000000Z","2024-10-14T14:15:40.000000Z",700,"SIBiLS","sibils","https:\u002F\u002Fsibils.org\u002F","Personalized information retrieval from the literature","2020-12-01T16:16:51.000000Z","2024-11-04T14:25:53.000000Z",717,"Nextclade","nextclade","https:\u002F\u002Fclades.nextstrain.org\u002F","https:\u002F\u002Fdocs.nextstrain.org\u002Fprojects\u002Fnextclade\u002Fen\u002Fstable\u002F","Clade assignment, mutation calling & QC for virus sequences","2022-03-31T07:39:29.000000Z","2024-10-18T13:45:48.000000Z",556,"V-pipe","v-pipe","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002F","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F#tutorials","Viral genomics pipeline","2020-06-22T10:05:02.000000Z","2024-09-25T07:35:28.000000Z",702,"raxmlGUI","raxmlgui","https:\u002F\u002Fantonellilab.github.io\u002FraxmlGUI\u002F","http:\u002F\u002Fdx.doi.org\u002F10.1111\u002F2041-210X.13512","raxmlGUI 2.0 is a graphical user interface to RAxML","2021-01-14T09:44:30.000000Z","2024-08-22T15:36:58.000000Z",660,"SWISS-MODEL Workspace","swiss-model-workspace","Fully automated protein structure homology-modeling server","2020-07-01T11:43:42.000000Z","2024-09-26T12:59:32.000000Z","HAMAP","hamap","https:\u002F\u002Fhamap.expasy.org\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fhamap_doc.html","UniProtKB family classification and annotation","2025-02-12T14:56:22.000000Z",580,"REALPHY","realphy","https:\u002F\u002Frealphy.unibas.ch\u002Frealphy\u002F","https:\u002F\u002Frealphy.unibas.ch\u002Fdocs\u002FRealphy_manual.pdf","Inference of phylogenetic trees from genome data","2020-06-24T10:35:26.000000Z","2024-10-24T13:49:57.000000Z",683,"V-pipe SARS-CoV-2","v-pipe-sars-cov-2","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fsars-cov-2\u002F","https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002FREADME.md","https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002Fdocs\u002Ftutorial_sarscov2.md","V-pipe pipeline for SARS-CoV-2 sequencing data","2020-07-14T08:10:17.000000Z","2024-09-13T11:27:52.000000Z",579,"ShoRAH","shorah","http:\u002F\u002Fcbg-ethz.github.io\u002Fshorah\u002F","Analysis of NGS data","2020-06-24T10:18:17.000000Z","2024-09-13T11:51:18.000000Z",589,"OpenStructure","openstructure","https:\u002F\u002Fopenstructure.org\u002F","https:\u002F\u002Fopenstructure.org\u002Fdocs\u002F","https:\u002F\u002Fopenstructure.org\u002Fdocs\u002Fintro\u002F","Molecular modelling and visualisation environment","2020-06-24T13:01:10.000000Z","2024-10-03T12:32:48.000000Z",690,"LEMMI","lemmi","https:\u002F\u002Fwww.ezlab.org\u002Flemmi.html","Continuous benchmarking of methods for metagenomics","2020-08-31T09:54:20.000000Z","2024-10-16T08:44:34.000000Z",570,"SwissParam","swissparam","http:\u002F\u002Fwww.swissparam.ch\u002F","http:\u002F\u002Fwww.swissparam.ch\u002FFAQ.php","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=yrf8HzFIpfk","Topology and parameters for small molecules","2020-06-23T18:05:23.000000Z","2024-10-22T09:41:25.000000Z",725,"CAMEO","cameo","https:\u002F\u002Fwww.cameo3d.org\u002F","https:\u002F\u002Fwww.cameo3d.org\u002Fcameong_help\u002F","Weekly automated benchmarking of protein structure modelling","2023-02-13T09:14:06.000000Z","2024-10-24T09:02:46.000000Z",666,"ISMARA","ismara","https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F","https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_ISMARA","Webservice for gene expression and epigenetic data analysis","special","https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F#terms","Terms of Use","2020-07-02T11:48:19.000000Z","2020-07-01T18:29:43.000000Z","2024-11-11T09:40:14.000000Z",729,"CREMA","crema","https:\u002F\u002Fcrema.unibas.ch","Cis-Regulatory Element Motif Activities","2023-07-31T07:37:49.000000Z","2024-11-11T09:40:58.000000Z",657,"CRUNCH","crunch","https:\u002F\u002Fcrunch.unibas.ch","Automated pipeline for ChIP-seq data analysis","2020-07-01T11:14:03.000000Z","2024-11-11T09:39:06.000000Z",669,"Phylogibbs","phylogibbs","https:\u002F\u002Fwww.phylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl","https:\u002F\u002Fphylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl?part=documentation&page=phylogibbs","Regulatory sites in a collection of DNA sequences","2020-07-01T18:43:30.000000Z","2024-10-24T14:12:47.000000Z",730,"DWT-online","dwt-online","https:\u002F\u002Fdwt.scicore.unibas.ch","Dinucleotide Weight Tensor toolbox and visualisation service","2023-10-03T12:10:48.000000Z","2024-11-06T14:59:52.000000Z",644,"HAMAP-Scan","hamap-scan","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002Fhamap_scan_userman.html","Scanning of protein sequences against HAMAP families","2020-06-30T18:14:20.000000Z","2025-02-12T15:20:51.000000Z",691,"HAMAP SPARQL endpoint","hamap-sparql-endpoint","https:\u002F\u002Fhamap.expasy.org\u002Fsparql","https:\u002F\u002Facademic.oup.com\u002Fgigascience\u002Farticle\u002F9\u002F2\u002Fgiaa003\u002F5731417","SPARQL access to the HAMAP annotation rules","a Creative Commons Attribution-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nd\u002F4.0\u002F","CC BY-ND 4.0","2022-04-14T10:31:45.000000Z","2020-10-27T11:03:40.000000Z","2025-02-12T16:05:13.000000Z",642,"MALDIPepQuant","maldipepquant","https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002F","https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002Fhelp\u002F","Quantify MALDI peptides from Phenyx output","2020-06-30T18:01:54.000000Z","2025-02-20T14:15:38.000000Z","https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorials","fastsimcoal","2025-01-30T13:15:05.000000Z","https:\u002F\u002Fprosite.expasy.org\u002Fprosite_license.html","PROSITE license","2020-07-16T11:36:48.000000Z","2022-04-14T10:30:04.000000Z","MHC Motif Atlas","2024-03-01T14:11:56.000000Z","rawrr","https:\u002F\u002Fwww.uniprot.org\u002Fhelp","pftools","https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fhelp","2025-01-09T15:16:33.000000Z"));</script><script src="/_nuxt/ab75555.js" defer></script><script src="/_nuxt/40c1276.js" defer></script><script src="/_nuxt/7a4419e.js" defer></script><script src="/_nuxt/f177c5f.js" defer></script><script src="/_nuxt/b680205.js" defer></script> </body> </html>