CINXE.COM

<!doctype html> <html data-n-head-ssr lang="en" class="font-body antialiased text-neutral-900" data-n-head="%7B%22lang%22:%7B%22ssr%22:%22en%22%7D,%22class%22:%7B%22ssr%22:%22font-body%20antialiased%20text-neutral-900%22%7D%7D"> <head > <meta data-n-head="ssr" charset="utf-8"><meta data-n-head="ssr" name="viewport" content="width=device-width, initial-scale=1"><meta data-n-head="ssr" name="google-site-verification" content="wW27Qr93sFIEvPN3uocwfHWDLqMkl1yRN1dtmrJNjyY"><meta data-n-head="ssr" data-hid="description" name="description" content="2-D PAGE analysis"><title>MELANIE - SIB Swiss Institute of Bioinformatics | Expasy</title><link data-n-head="ssr" rel="icon" type="image/x-icon" href="/favicon.ico"><link data-n-head="ssr" rel="stylesheet" href="https://fonts.bunny.net/css?family=Source+Sans+Pro:wght@400;600;700&display=swap"><script data-n-head="ssr" type="application/ld+json">{"@context":"https://schema.org/","@type":"DataSet","@id":"https://www.expasy.org/","http://purl.org/dc/terms/conformsTo":{"@id":"https://bioschemas.org/profiles/Dataset/1.0-RELEASE","@type":"CreativeWork"},"name":"Expasy","description":"Expasy is the bioinformatics resource portal of the SIB Swiss Institute of Bioinformatics.","url":"https://www.expasy.org/","identifier":"https://doi.org/10.25504/FAIRsharing.ceeffa","thumbnailUrl":"https://www.expasy.org/images/expasy-homepage.png","keywords":"bioinformatics, registry, resource, database, tool, SIB, Swiss, Swiss Institute of Bioinformatics","isAccessibleForFree":true,"potentialAction":{"@type":"SearchAction","target":"https://www.expasy.org/search/{search_term_string}?type=keyword","query-input":"required name=search_term_string"},"citation":{"@type":"ScholarlyArticle","name":"Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users.","author":[{"@type":"Person","givenName":"Severine","familyName":"Duvaud","identifier":"http://orcid.org/0000-0001-7892-9678"},{"@type":"Person","givenName":"Chiara","familyName":"Gabella","identifier":"http://orcid.org/0000-0002-7104-5025"},{"@type":"Person","givenName":"Frederique","familyName":"Lisacek","identifier":"https://orcid.org/0000-0002-0948-4537"},{"@type":"Person","givenName":"Heinz","familyName":"Stockinger","identifier":"https://orcid.org/0000-0003-4666-7719"},{"@type":"Person","givenName":"Vassilios","familyName":"Ioannidis","identifier":"https://orcid.org/0000-0002-4209-2578"},{"@type":"Person","givenName":"Christine","familyName":"Durinx","identifier":"https://orcid.org/0000-0003-4237-8899"}],"identifier":"http://dx.doi.org/10.1093/nar/gkab225","sameas":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8265094/"},"provider":{"@type":"Organization","sameAs":"https://ror.org/002n09z45","name":"SIB Swiss Institute of Bioinformatics","url":"https://www.sib.swiss/"}}</script><link rel="preload" href="/_nuxt/ab75555.js" as="script"><link rel="preload" href="/_nuxt/7a4419e.js" as="script"><link rel="preload" href="/_nuxt/f177c5f.js" as="script"><link rel="preload" href="/_nuxt/css/23d4306.css" as="style"><link rel="preload" href="/_nuxt/ec37a27.js" as="script"><link rel="preload" href="/_nuxt/css/5c07445.css" as="style"><link rel="preload" href="/_nuxt/40c1276.js" as="script"><link rel="stylesheet" href="/_nuxt/css/23d4306.css"><link rel="stylesheet" href="/_nuxt/css/5c07445.css"> </head> <body > <div data-server-rendered="true" id="__nuxt"><div id="__layout"><div class="h-screen flex flex-col"><div class="top"></div> <header role="banner" class="mb-4"><div class="flex max-sm:flex-col container"><a href="/" class="flex-1 max-sm:hidden nuxt-link-active"><div class="pt-6"><img src="/images/expasy-addon.png" srcset="/images/expasy-addon.png, /images/expasy-addon@2x.png 2x" alt="Expasy: Swiss Bioinformatics Resource Portal" class="inline-block"></div></a> <nav role="navigation" class="max-sm:w-full"><ul class="nav"><li class="inline-block"><a href="/" class="nav__link nuxt-link-active"> Home </a></li> <li class="inline-block"><a href="/about" class="nav__link"> About </a></li> <li class="inline-block"><a href="https://www.sib.swiss/about/news" target="_blank" rel="noopener noreferer" class="nav__link"> SIB News </a></li> <li class="inline-block"><a href="/contact" class="nav__link"> Contact </a></li></ul></nav></div></header> <main role="main" class="page-main flex-grow"><div class="container container--xs"><form action="/search" method="get" class="search"><div class="text-center"><img src="/images/expasy-homepage.png" srcset="/images/expasy-homepage.png, /images/expasy-homepage@2x.png 2x" alt="Expasy: Swiss Bioinformatics Resource Portal" class="mb-8 inline-block md:hidden"></div> <div class="flex mb-1"><label for="search" class="inline-block h4 mb-2 sr-only"> Explore high-quality biological data resources </label> <input id="search" name="search" type="search" required="required" class="field search__input"> <button type="submit" class="btn search__submit"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--search icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#search"></use></svg></button></div> <div class="text-sm"> e.g. <a href="/search/blast">BLAST</a>, <a href="/search/uniprot">UniProt</a>, <a href="/search/msh6">MSH6</a>, <a href="/search/albumin">Albumin</a>... </div> </form></div> <div class="container"><div class="resource-page"><div class="flex-grid flex-grid--md flex-grid--even"><div class="lg:w-2/3 xl:w-3/4 flex-grid__item w-full"><section class="flex flex-col pt-5 max-md:pb-5 border-neutral-200 border-t"><div class="flex-auto"><div class="mb-3 md:flex md:items-center"><div class="md:flex-1"><h1 class="mb-5"> MELANIE </h1></div> <ul aria-label="Resource categories and types" class="resource-page__filters"><li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="text-primary-500 icon icon--protein icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <div class="flex-1"> Proteins & Proteomes </div></li> <li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <div class="flex-1"> Software tool </div></li></ul></div> <div class="mb-8">Melanie combines a unique and flexible interface for the visualization, exploration and analysis of 2D gel and blot images. The software allows differential protein expression analysis of conventional 2-DE and 2D-DIGE gels, to detect protein abundance changes for biomarker discovery. It also features dedicated functionality for Host Cell Protein (HCP) antibody coverage analysis to support development of immunoassays for HCP detection in biopharmaceuticals.</div> <div class="flex flex-col items-start gap-8 lg:items-center lg:gap-12 lg:flex-row"><div class="flex items-start justify-center lg:justify-start"><a href="https://2d-gel-analysis.com" target="_blank" rel="noopener noreferer" class="btn btn--primary"> Browse the resource website </a></div> <div class="flex flex-col items-start gap-3"> <div><a href="https://2d-gel-analysis.com/documentation/" target="_blank" rel="noopener noreferer" class="flex items-center gap-2 no-underline"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--book icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#book"></use></svg> <span>Read the documentation</span></a></div> </div></div></div> <footer class="p-5 resource-page__info bg-neutral-100 border-neutral-200 border-t border-b"><div><p>Developed by the <a target="_blank" rel="noopener noreferrer nofollow" href="https://www.sib.swiss/clinical-bioinformatics" tt-mode="url">Clinical Bioinformatics group</a>.</p></div> </footer></section></div> <aside class="lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><div class="resource-page__ontologie"><section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> What you can do with this resource </h2> <ul><li class="inline-block"><a href="/search/Image%20analysis?type=keyword"> Image analysis </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20quantification?type=keyword"> Protein quantification </a><span>,聽</span></li><li class="inline-block"><a href="/search/Differential%20protein%20expression%20profiling?type=keyword"> Differential protein expression profiling </a><span>,聽</span></li><li class="inline-block"><a href="/search/Expression%20analysis?type=keyword"> Expression analysis </a></li></ul></section> <section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> Browse these keywords in Expasy </h2> <ul><li class="inline-block"><a href="/search/2D%20PAGE%20image?type=keyword"> 2D PAGE image </a><span>,聽</span></li><li class="inline-block"><a href="/search/Data%20visualisation?type=keyword"> Data visualisation </a><span>,聽</span></li><li class="inline-block"><a href="/search/Biomarkers?type=keyword"> Biomarkers </a><span>,聽</span></li><li class="inline-block"><a href="/search/Medicine?type=keyword"> Medicine </a><span>,聽</span></li><li class="inline-block"><a href="/search/Proteomics%20experiment?type=keyword"> Proteomics experiment </a><span>,聽</span></li><li class="inline-block"><a href="/search/TIFF?type=keyword"> TIFF </a><span>,聽</span></li><li class="inline-block"><a href="/search/Workflows?type=keyword"> Workflows </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20modifications?type=keyword"> Protein modifications </a><span>,聽</span></li><li class="inline-block"><a href="/search/Medicine?type=keyword"> Medicine </a><span>,聽</span></li><li class="inline-block"><a href="/search/Proteomics%20experiment?type=keyword"> Proteomics experiment </a><span>,聽</span></li><li class="inline-block"><a href="/search/TIFF?type=keyword"> TIFF </a><span>,聽</span></li><li class="inline-block"><a href="/search/Workflows?type=keyword"> Workflows </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20modifications?type=keyword"> Protein modifications </a></li></ul></section></div></aside></div></div> <section class="py-5 mt-10 border-neutral-200 border-t"><h2 class="mb-5 h3"> You might also be interested in </h2> <ul class="flex-grid flex-grid--multiline flex-grid--even"><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genes & Genomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/viralzone" class="resource__link"><h3 class="h5"> ViralZone </h3></a> <div class="text-sm leading-snug mt-1"> Fact sheets about viruses linked to sequence databases </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/msight" class="resource__link"><h3 class="h5"> MSight </h3></a> <div class="text-sm leading-snug mt-1"> Mass Spectrometry Imager </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glyconnect-compozitor" class="resource__link"><h3 class="h5"> GlyConnect Compozitor </h3></a> <div class="text-sm leading-snug mt-1"> Contextualises glycan composition sets </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/swissbiopics" class="resource__link"><h3 class="h5"> SwissBioPics </h3></a> <div class="text-sm leading-snug mt-1"> Subcellular location visualization </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/proc" class="resource__link"><h3 class="h5"> pROC </h3></a> <div class="text-sm leading-snug mt-1"> Visualize, smooth and compare ROC curves </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/nextstrain" class="resource__link"><h3 class="h5"> Nextstrain </h3></a> <div class="text-sm leading-snug mt-1"> Impact of pathogen genome data on science and public health </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sim" class="resource__link"><h3 class="h5"> SIM </h3></a> <div class="text-sm leading-snug mt-1"> Alignment of two protein sequences or within a sequence </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/peptidecutter" class="resource__link"><h3 class="h5"> PeptideCutter </h3></a> <div class="text-sm leading-snug mt-1"> Potential cleavage sites in a protein </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/uniprot-clustalo" class="resource__link"><h3 class="h5"> UniProt ClustalO </h3></a> <div class="text-sm leading-snug mt-1"> Align two or more protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/unicarb-db" class="resource__link"><h3 class="h5"> UniCarb-DB </h3></a> <div class="text-sm leading-snug mt-1"> Glycan structures and associated mass spectrometry data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swiss-mass-abacus" class="resource__link"><h3 class="h5"> Swiss Mass Abacus </h3></a> <div class="text-sm leading-snug mt-1"> Intuitive calculator of peptide and glycopeptide masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sugarsketcher" class="resource__link"><h3 class="h5"> SugarSketcher </h3></a> <div class="text-sm leading-snug mt-1"> Fast, intuitive, SNFG-compliant glycan structure drawing </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/sugarbind" class="resource__link"><h3 class="h5"> SugarBind </h3></a> <div class="text-sm leading-snug mt-1"> Pathogen Sugar-Binding Database </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glynsight" class="resource__link"><h3 class="h5"> Glynsight </h3></a> <div class="text-sm leading-snug mt-1"> Visualise and compare glycan expression profiles </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycositealign" class="resource__link"><h3 class="h5"> GlycoSiteAlign </h3></a> <div class="text-sm leading-snug mt-1"> Multiple alignment of sequences around glycosylation sites </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect" class="resource__link"><h3 class="h5"> GlyConnect </h3></a> <div class="text-sm leading-snug mt-1"> Integrated data platform to study glycosylation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycodigest" class="resource__link"><h3 class="h5"> GlycoDigest </h3></a> <div class="text-sm leading-snug mt-1"> In silico digestion of glycans by exoglycosidases </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sulfinator" class="resource__link"><h3 class="h5"> Sulfinator </h3></a> <div class="text-sm leading-snug mt-1"> Predict tyrosine sulfation sites in protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/peptidemass" class="resource__link"><h3 class="h5"> PeptideMass </h3></a> <div class="text-sm leading-snug mt-1"> Theoretical protein cleavage by a given enzyme </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/myristoylator" class="resource__link"><h3 class="h5"> Myristoylator </h3></a> <div class="text-sm leading-snug mt-1"> N-terminal myristoylation of proteins by neural networks </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycomod" class="resource__link"><h3 class="h5"> GlycoMod </h3></a> <div class="text-sm leading-snug mt-1"> Possible oligosaccharide structures on proteins from masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findpept" class="resource__link"><h3 class="h5"> FindPept </h3></a> <div class="text-sm leading-snug mt-1"> Unspecific protein cleavage from experimental masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findmod" class="resource__link"><h3 class="h5"> FindMod </h3></a> <div class="text-sm leading-snug mt-1"> Potential PTMs and single amino acid substitutions </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyco-expasy" class="resource__link"><h3 class="h5"> Glyco@Expasy </h3></a> <div class="text-sm leading-snug mt-1"> Zooming in on web-based glycoinformatics resources </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect-sparql-endpoint" class="resource__link"><h3 class="h5"> GlyConnect SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to GlyConnect </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycoql" class="resource__link"><h3 class="h5"> GlycoQL </h3></a> <div class="text-sm leading-snug mt-1"> Match a glycan substructure to a database of full structures </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/venom-zone" class="resource__link"><h3 class="h5"> VenomZone </h3></a> <div class="text-sm leading-snug mt-1"> Portal to venom protein UniProtKB entries </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Transcriptomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/asap" class="resource__link"><h3 class="h5"> ASAP </h3></a> <div class="text-sm leading-snug mt-1"> Web-based, cooperative portal for single-cell data analyses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--text-mining icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#text-mining"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Text mining & Machine learning </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sibils" class="resource__link"><h3 class="h5"> SIBiLS </h3></a> <div class="text-sm leading-snug mt-1"> Personalized information retrieval from the literature </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/nextclade" class="resource__link"><h3 class="h5"> Nextclade </h3></a> <div class="text-sm leading-snug mt-1"> Clade assignment, mutation calling & QC for virus sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Population genetics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/v-pipe" class="resource__link"><h3 class="h5"> V-pipe </h3></a> <div class="text-sm leading-snug mt-1"> Viral genomics pipeline </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/raxmlgui" class="resource__link"><h3 class="h5"> raxmlGUI </h3></a> <div class="text-sm leading-snug mt-1"> raxmlGUI 2.0 is a graphical user interface to RAxML </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural Biology </li><li class="inline-block sr-only"><span>, </span> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swiss-model-workspace" class="resource__link"><h3 class="h5"> SWISS-MODEL Workspace </h3></a> <div class="text-sm leading-snug mt-1"> Fully automated protein structure homology-modeling server </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hamap" class="resource__link"><h3 class="h5"> HAMAP </h3></a> <div class="text-sm leading-snug mt-1"> UniProtKB family classification and annotation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genes & Genomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Evolution & Phylogeny </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/realphy" class="resource__link"><h3 class="h5"> REALPHY </h3></a> <div class="text-sm leading-snug mt-1"> Inference of phylogenetic trees from genome data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--evolution icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Population genetics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/v-pipe-sars-cov-2" class="resource__link"><h3 class="h5"> V-pipe SARS-CoV-2 </h3></a> <div class="text-sm leading-snug mt-1"> V-pipe pipeline for SARS-CoV-2 sequencing data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/shorah" class="resource__link"><h3 class="h5"> ShoRAH </h3></a> <div class="text-sm leading-snug mt-1"> Analysis of NGS data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/openstructure" class="resource__link"><h3 class="h5"> OpenStructure </h3></a> <div class="text-sm leading-snug mt-1"> Molecular modelling and visualisation environment </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Metagenomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/lemmi" class="resource__link"><h3 class="h5"> LEMMI </h3></a> <div class="text-sm leading-snug mt-1"> Continuous benchmarking of methods for metagenomics </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Medicinal chemistry </li><li class="inline-block sr-only"><span>, </span> Structural analysis </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/swissparam" class="resource__link"><h3 class="h5"> SwissParam </h3></a> <div class="text-sm leading-snug mt-1"> Topology and parameters for small molecules </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--stru-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Structural Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/cameo" class="resource__link"><h3 class="h5"> CAMEO </h3></a> <div class="text-sm leading-snug mt-1"> Weekly automated benchmarking of protein structure modelling </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li><li class="inline-block sr-only"><span>, </span> Transcriptomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/ismara" class="resource__link"><h3 class="h5"> ISMARA </h3></a> <div class="text-sm leading-snug mt-1"> Webservice for gene expression and epigenetic data analysis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genes & Genomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/crema" class="resource__link"><h3 class="h5"> CREMA </h3></a> <div class="text-sm leading-snug mt-1"> Cis-Regulatory Element Motif Activities </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li><li class="inline-block sr-only"><span>, </span> Transcriptomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/crunch" class="resource__link"><h3 class="h5"> CRUNCH </h3></a> <div class="text-sm leading-snug mt-1"> Automated pipeline for ChIP-seq data analysis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Genomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/phylogibbs" class="resource__link"><h3 class="h5"> Phylogibbs </h3></a> <div class="text-sm leading-snug mt-1"> Regulatory sites in a collection of DNA sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--gene icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Transcriptomics </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/dwt-online" class="resource__link"><h3 class="h5"> DWT-online </h3></a> <div class="text-sm leading-snug mt-1"> Dinucleotide Weight Tensor toolbox and visualisation service </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hamap-scan" class="resource__link"><h3 class="h5"> HAMAP-Scan </h3></a> <div class="text-sm leading-snug mt-1"> Scanning of protein sequences against HAMAP families </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/hamap-sparql-endpoint" class="resource__link"><h3 class="h5"> HAMAP SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to the HAMAP annotation rules </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/maldipepquant" class="resource__link"><h3 class="h5"> MALDIPepQuant </h3></a> <div class="text-sm leading-snug mt-1"> Quantify MALDI peptides from Phenyx output </div></article></li></ul></section></div></main>  <footer role="contentinfo" class="text-sm text-neutral-700 max-sm:text-center sm:mt-12 pt-8 pb-8 bg-neutral-100"><div class="container"><div class="flex max-sm:flex-col sm:items-center"><div class="md:flex-1 mb-8 md:mb-0"><div class="max-w-sm md:max-w-3xl md:pr-12"><svg aria-hidden="true" focusable="false" role="img" class="md:mr-2 mb-2 inline-block icon icon--sib-mark icon--sib-mark"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sib-mark"></use></svg> <div class="md:inline-block"> Expasy is operated by the <a href="https://sib.swiss" target="blank" rel="noopener noreferer">SIB Swiss Institute of Bioinformatics</a> | <a href="/terms-of-use"> Terms of Use </a></div></div></div> <a href="#top"> Back to the top </a></div></div></footer></div></div></div><script>window.__NUXT__=(function(a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p,q,r,s,t,u,v,w,x,y,z,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,_,$,aa,ab,ac,ad,ae,af,ag,ah,ai,aj,ak,al,am,an,ao,ap,aq,ar,as,at,au,av,aw,ax,ay,az,aA,aB,aC,aD,aE,aF,aG,aH,aI,aJ,aK,aL,aM,aN,aO,aP,aQ,aR,aS,aT,aU,aV,aW,aX,aY,aZ,a_,a$,ba,bb,bc,bd,be,bf,bg,bh,bi,bj,bk,bl,bm,bn,bo,bp,bq,br,bs,bt,bu,bv,bw,bx,by,bz,bA,bB,bC,bD,bE,bF,bG,bH,bI,bJ,bK,bL,bM,bN,bO,bP,bQ,bR,bS,bT,bU,bV,bW,bX,bY,bZ,b_,b$,ca,cb,cc,cd,ce,cf,cg,ch,ci,cj,ck,cl,cm,cn,co,cp,cq,cr,cs,ct,cu,cv,cw,cx,cy,cz,cA,cB,cC,cD,cE,cF,cG,cH,cI,cJ,cK,cL,cM,cN,cO,cP,cQ,cR,cS,cT,cU,cV,cW,cX,cY,cZ,c_,c$,da,db,dc,dd,de,df,dg,dh,di,dj,dk,dl,dm,dn,do0,dp,dq,dr,ds,dt,du,dv,dw,dx,dy,dz,dA,dB,dC,dD,dE,dF,dG,dH,dI,dJ,dK,dL,dM,dN,dO,dP,dQ,dR,dS,dT,dU,dV,dW,dX,dY,dZ,d_,d$,ea,eb,ec,ed,ee,ef,eg,eh,ei,ej,ek,el,em,en,eo,ep,eq,er,es,et,eu,ev,ew,ex,ey,ez,eA,eB,eC,eD,eE,eF,eG,eH,eI,eJ,eK,eL,eM,eN,eO,eP,eQ,eR,eS,eT,eU,eV,eW,eX,eY,eZ,e_,e$,fa,fb,fc,fd,fe,ff,fg,fh,fi,fj,fk,fl,fm,fn,fo,fp,fq,fr,fs,ft,fu,fv,fw,fx,fy,fz,fA,fB,fC,fD,fE,fF,fG,fH,fI,fJ,fK,fL,fM,fN,fO,fP,fQ,fR,fS,fT,fU,fV,fW,fX,fY,fZ,f_,f$,ga,gb,gc,gd,ge,gf,gg,gh,gi,gj,gk,gl,gm,gn,go,gp,gq,gr,gs,gt,gu,gv,gw,gx,gy,gz,gA,gB,gC,gD,gE,gF,gG,gH,gI,gJ,gK,gL,gM,gN,gO,gP,gQ,gR,gS,gT,gU,gV,gW,gX,gY,gZ,g_,g$,ha,hb,hc,hd,he,hf,hg,hh,hi,hj,hk,hl,hm,hn,ho,hp,hq,hr,hs,ht,hu,hv,hw,hx,hy,hz,hA,hB,hC,hD,hE,hF,hG,hH,hI,hJ,hK,hL,hM,hN,hO,hP,hQ,hR,hS,hT,hU,hV,hW,hX,hY,hZ,h_,h$,ia,ib,ic,id,ie,if0,ig,ih,ii,ij,ik,il,im,in0,io,ip,iq,ir,is,it,iu,iv){return {layout:"default",data:[{resource:{id:aT,title:aU,slug:aV,pinned:e,types:[{id:c,icon:c,title:g}],url:aW,documentation_url:aX,tutorial_url:a,short_description:aY,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:aZ,updated_at:a_,description:"Melanie combines a unique and flexible interface for the visualization, exploration and analysis of 2D gel and blot images. The software allows differential protein expression analysis of conventional 2-DE and 2D-DIGE gels, to detect protein abundance changes for biomarker discovery. It also features dedicated functionality for Host Cell Protein (HCP) antibody coverage analysis to support development of immunoassays for HCP detection in biopharmaceuticals.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fclinical-bioinformatics\" tt-mode=\"url\"\u003EClinical Bioinformatics group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E",ontology_terms:[{id:77,name:"2D PAGE image",type:h},{id:1914,name:"Image analysis",type:m},{id:1954,name:"Protein quantification",type:m},{id:1993,name:"Differential protein expression profiling",type:m},{id:2044,name:"Data visualisation",type:ac},{id:1626,name:"Expression analysis",type:m},{id:2183,name:"Biomarkers",type:ac},{id:a$,name:ba,type:ac},{id:bb,name:bc,type:ac},{id:bd,name:be,type:G},{id:bf,name:bg,type:ac},{id:bh,name:bi,type:ac},{id:a$,name:ba,type:ac},{id:bb,name:bc,type:ac},{id:bd,name:be,type:G},{id:bf,name:bg,type:ac},{id:bh,name:bi,type:ac}],related_resources:[{id:O,title:bj,slug:bk,pinned:e,types:[{id:d,icon:d,title:n}],url:bl,documentation_url:a,tutorial_url:bm,short_description:bn,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:bo,description:"ViralZone is a web resource for all viral genus and families, providing general molecular and epidemiological information, along with virion and genome figures. Each virus or family page gives an easy access to UniProtKB\u002FSwiss-Prot viral protein entries.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=DXXSspwt3AE",group_info:aA},{id:bp,title:bq,slug:br,pinned:e,types:[{id:c,icon:c,title:g}],url:bs,documentation_url:a,tutorial_url:a,short_description:bt,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:bu,updated_at:bv,description:"An image analysis software for liquid chromatography-mass spectrometry. MSight is a tool specifically developed for the representation of mass spectra along with data from a separation step. It provides simple ways to navigate through very large volumes of data, with the ability to display small regions for closer scrutiny.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fclinical-bioinformatics\" tt-mode=\"url\"\u003E\u003Cu\u003EClinical Bioinformatics group\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:bw,title:bx,slug:by,pinned:e,types:[{id:c,icon:c,title:g}],url:bz,documentation_url:a,tutorial_url:a,short_description:bA,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:s,icon:p,children:[]}],created_at:bB,updated_at:bC,description:"Compozitor queries the GlyConnect database to bring out contextual information relative to a set of glycan compositions (glycome). The tool takes advantage of compositions being related to one another through shared monosaccharide counts and outputs interactive graphs summarising information searched in the database.",media_url:a,group_info:$},{id:bD,title:bE,slug:bF,pinned:e,types:[{id:d,icon:d,title:n}],url:bG,documentation_url:bH,tutorial_url:a,short_description:bI,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:bJ,updated_at:bK,description:"SwissBioPics is a freely available library of interactive biological images for visualizing subcellular location data. It includes cell types from all kingdoms of life - from muscle, neuronal and epithelial cells of animals to rods, cocci, clubs, spirals, and other more exotic forms of bacteria and archaea.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=uXj-MVvH1jg",group_info:aA},{id:bL,title:bM,slug:bN,pinned:e,types:[{id:c,icon:c,title:g}],url:bO,documentation_url:a,tutorial_url:a,short_description:bP,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:f,title:j,icon:k,children:[]}],created_at:bQ,updated_at:bR,description:"A package (R, S+) to visualize, smooth and compare receiver operating characteristic (ROC curves)",media_url:a,group_info:$},{id:bS,title:bT,slug:bU,pinned:S,types:[{id:c,icon:c,title:g}],url:bV,documentation_url:bW,tutorial_url:bX,short_description:bY,license_type:{id:aB,title:aC,link_url:aD,link_label:aE,created_at:an,updated_at:an},categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:bZ,updated_at:b_,description:"Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data. We provide a continually-updated view of publicly available data alongside powerful analytic and visualization tools for use by the community. Our goal is to aid epidemiological understanding and improve outbreak response.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fchannel\u002FUCir2iV2soccUqkLblrCdEjQ",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Frichard-neher-group\" rel=\"noopener noreferrer nofollow\"\u003EMicrobial Evolution group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:b$,title:ca,slug:cb,pinned:e,types:[{id:c,icon:c,title:g}],url:cc,documentation_url:a,tutorial_url:a,short_description:cd,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ce,updated_at:cf,description:"SIM finds a user-defined number of best non-intersecting alignments between two protein sequences or within a sequence. Results can be viewed with LALNVIEW, a graphical viewer program for pairwise alignments.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002F\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:cg,title:ch,slug:ci,pinned:e,types:[{id:c,icon:c,title:g}],url:cj,documentation_url:ck,tutorial_url:a,short_description:cl,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:cm,updated_at:cn,description:"PeptideCutter predicts potential substrate cleavage sites, cleaved by proteases or chemicals in a given protein sequence. The tool returns the query sequence with the possible cleavage sites mapped on it and\u002For a table of cleavage site positions.",media_url:a,group_info:ah},{id:co,title:cp,slug:cq,pinned:e,types:[{id:c,icon:c,title:g}],url:cr,documentation_url:cs,tutorial_url:a,short_description:ct,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:cu,updated_at:cv,description:"Align two or more protein sequences on the UniProt web site using ClustalOmega.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:cw,title:cx,slug:cy,pinned:e,types:[{id:d,icon:d,title:n}],url:cz,documentation_url:a,tutorial_url:a,short_description:cA,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:s,icon:p,children:[]}],created_at:cB,updated_at:cC,description:"UniCarb-DB stores data and information on glycan structures and associated fragment data characterised by LC-MS\u002FMS strategies. It is annotated with high-quality datasets.",media_url:a,group_info:$},{id:cD,title:cE,slug:cF,pinned:e,types:[{id:c,icon:c,title:g}],url:cG,documentation_url:a,tutorial_url:a,short_description:cH,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:cI,updated_at:cJ,description:"Swiss Mass Abacus is a calculator of peptide and glycopeptide masses. It is purposefully kept as simple as a basic calculator executing arithmetic operations.",media_url:a,group_info:$},{id:cK,title:cL,slug:cM,pinned:e,types:[{id:c,icon:c,title:g}],url:cN,documentation_url:a,tutorial_url:a,short_description:cO,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:cP,updated_at:cQ,description:"SugarSketcher was designed to provide users with a simple and efficient interface for drawing glycan molecules with the logos defined in the Symbol Nomenclature for Glycans (SNFG). The tool operates in a quick mode in which the top menu shows a limited set of logos or in a normal mode in which the top menu is comprehensive. In either cases, a structure can be drawn from scratch or from a core structure. Structures are exportable as .svg images or in the GlycoCT format.",media_url:a,group_info:$},{id:cR,title:cS,slug:cT,pinned:e,types:[{id:d,icon:d,title:n}],url:cU,documentation_url:cV,tutorial_url:a,short_description:cW,license_type:{id:B,title:aF,link_url:aG,link_label:aH,created_at:b,updated_at:aI},categories:[{id:o,title:s,icon:p,children:[]}],created_at:cX,updated_at:cY,description:"SugarBind covers knowledge of glycan binding of human pathogen lectins and adhesins. Information is collected by experts from articles published in peer-reviewed scientific journals. The data were compiled through an exhaustive search of literature published over the past 30 years by glycobiologists, microbiologists, and medical histologists.",media_url:a,group_info:$},{id:cZ,title:c_,slug:c$,pinned:e,types:[{id:c,icon:c,title:g}],url:da,documentation_url:db,tutorial_url:a,short_description:dc,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:dd,updated_at:de,description:"Glynsight is a web interface to upload, visualize and interactively compare glycan expression profiles. The tool can process N- or O-linked glycan expression data.",media_url:a,group_info:$},{id:df,title:dg,slug:dh,pinned:e,types:[{id:c,icon:c,title:g}],url:di,documentation_url:a,tutorial_url:a,short_description:dj,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dk,updated_at:dl,description:"GlycoSiteAlign selectively aligns amino acid sequences surrounding glycosylation sites (by default, 20 positions on each side of the glycosylated residue) depending on structural properties of the glycan attached to the site. These properties are either general (e.g., \"fucosylated\") or specific, such as precise composition, and are proposed in a drop-down list.",media_url:a,group_info:$},{id:dm,title:dn,slug:do0,pinned:e,types:[{id:d,icon:d,title:n}],url:dp,documentation_url:dq,tutorial_url:dr,short_description:ds,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dt,updated_at:du,description:"GlyConnect is a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. The purpose of GlyConnect is to bring out in a single resource the relationships between glycans, the proteins that carry them, the enzymes that synthesise or degrade them and the proteins that bind them.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" rel=\"noopener noreferrer nofollow\"\u003EProteome Informatics group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:dv,title:dw,slug:dx,pinned:e,types:[{id:c,icon:c,title:g}],url:dy,documentation_url:a,tutorial_url:a,short_description:dz,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:dA,updated_at:dB,description:"GlycoDigest is a tool that simulates the action of these exoglycosidases on released oligosaccharides. It assists glycobiologists in designing enzyme mixtures that can be used to guide the precise determination of glycan structures.",media_url:a,group_info:$},{id:dC,title:dD,slug:dE,pinned:e,types:[{id:c,icon:c,title:g}],url:dF,documentation_url:dG,tutorial_url:a,short_description:dH,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dI,updated_at:dJ,description:"The Sulfinator is a software tool able to predict tyrosine sulfation sites in protein sequences. It employs four different Hidden Markov Models that were built to recognise sulfated tyrosine residues located N-terminally, within sequence windows of more than 25 amino acids and C-terminally, as well as sulfated tyrosines clustered within 25 amino acid windows, respectively. All four HMMs contain the distilled information from one multiple sequence alignment.",media_url:a,group_info:ah},{id:dK,title:dL,slug:dM,pinned:e,types:[{id:c,icon:c,title:g}],url:dN,documentation_url:dO,tutorial_url:a,short_description:dP,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dQ,updated_at:dR,description:"Cleave a protein sequence with a chosen enzyme\u002Fprotease, and computes the masses of the generated peptides. The tool also returns theoretical isoelectric point and mass values for the protein of interest. If desired, PeptideMass can return the mass of peptides known to carry post-translational modifications, and can highlight peptides whose masses may be affected by database conflicts, polymorphisms or splice variants.",media_url:a,group_info:ah},{id:dS,title:dT,slug:dU,pinned:e,types:[{id:c,icon:c,title:g}],url:dV,documentation_url:dW,tutorial_url:a,short_description:dX,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dY,updated_at:dZ,description:"Predict N-terminal myristoylation of proteins by neural networks. Myristoylator uses ensembles of neural networks, in order to learn to discriminate positive and negative sequences for N-myristoylation.",media_url:a,group_info:ah},{id:d_,title:d$,slug:ea,pinned:e,types:[{id:c,icon:c,title:g}],url:eb,documentation_url:a,tutorial_url:a,short_description:ec,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:ed,updated_at:ee,description:"Predict possible oligosaccharide structures that occur on proteins from their experimentally determined masses. The program can be used for free or derivatized oligosaccharides and for glycopeptides.",media_url:a,group_info:"\u003Cp\u003EHosted by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:ef,title:eg,slug:eh,pinned:e,types:[{id:c,icon:c,title:g}],url:ei,documentation_url:ej,tutorial_url:a,short_description:ek,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:el,updated_at:em,description:"Identify peptides that result from unspecific cleavage of proteins from their experimental masses, taking into account artefactual chemical modifications, post-translational modifications (PTM) and protease autolytic cleavage.",media_url:a,group_info:ah},{id:en,title:eo,slug:ep,pinned:e,types:[{id:c,icon:c,title:g}],url:eq,documentation_url:er,tutorial_url:a,short_description:es,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:et,updated_at:eu,description:"Predict potential protein post-translational modifications (PTM) and find potential single amino acid substitutions in peptides. The experimentally measured peptide masses are compared with the theoretical peptides calculated from a specified Swiss-Prot\u002FTrEMBL entry or from a user-entered sequence, and mass differences are used to better characterise the protein of interest.",media_url:a,group_info:ah},{id:ev,title:ew,slug:ex,pinned:S,types:[{id:d,icon:d,title:n}],url:ey,documentation_url:a,tutorial_url:a,short_description:ez,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eA,updated_at:eB,description:"Glyco@Expasy centralizes web-based glycoinformatics resources developed within an international network of glycoscientists. The philosophy is that it should be {glycoscientist AND protein scientist}鈥揻riendly with the aim of (1) popularizing the use of bioinformatics in glycobiology and (2) emphasizing the relationship between glycobiology and protein-oriented bioinformatics resources. Glyco@Expasy was designed with glycoscientists to meet the growing needs of the community for glycoinformatics.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=Vhm9WKq7LM8",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" rel=\"noopener noreferrer nofollow\"\u003EProteome Informatics group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:eC,title:eD,slug:eE,pinned:e,types:[{id:d,icon:d,title:n}],url:eF,documentation_url:a,tutorial_url:a,short_description:eG,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eH,updated_at:eI,description:"SPARQL access to GlyConnect, a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. The purpose of GlyConnect is to bring out in a single resource the relationships between glycans, the proteins that carry them, the enzymes that synthesise or degrade them and the proteins that bind them.",media_url:a,group_info:$},{id:eJ,title:eK,slug:eL,pinned:e,types:[{id:c,icon:c,title:g}],url:eM,documentation_url:a,tutorial_url:a,short_description:eN,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:as,updated_at:as,description:"GlycoQL (previously GlyS3) matches any substructure such as glycan determinants to a large collection of structures recorded in Glyconnect or SugarBind.",media_url:a,group_info:$},{id:ar,title:eO,slug:eP,pinned:e,types:[{id:d,icon:d,title:n}],url:eQ,documentation_url:eR,tutorial_url:a,short_description:eS,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:eT,description:"VenomZone is a free web resource that provides information on venoms from six animal taxa (snakes, scorpions, spiders, cone snails, sea anemones and insects), as well as on their targets. Information can be browsed through pages on taxonomy, activity and venom protein families and all these pages link to related venom\u002Ftoxin protein information from the manually curated UniProtKB\u002FSwiss-Prot database.",media_url:a,group_info:aA},{id:eU,title:eV,slug:eW,pinned:S,types:[{id:c,icon:c,title:g}],url:eX,documentation_url:a,tutorial_url:eY,short_description:eZ,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:q,title:A,icon:l,children:[]}],created_at:e_,updated_at:e$,description:"ASAP (Automated Single-cell Analysis Portal) is a web-based, collaborative portal aimed at rendering single-cell 'omics data analyses more accessible to researchers. No installation is required and standardized analyses can be run in minutes without requiring significant computing power.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 ASAP features the single-cell transcriptomes for the Human Cell Atlas and the Fly Cell Atlas.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=OjFamgLC_8M",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fbart-deplancke-group\" rel=\"noopener noreferrer nofollow\"\u003ELaboratory of Systems Biology and Genetics (LSBG) group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:fa,title:fb,slug:fc,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fd,documentation_url:a,tutorial_url:a,short_description:fe,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:ff,updated_at:fg,description:"SIBiLS (Swiss Institute of Bioinformatics Literature Services) provide personalized information retrieval from the biological literature. SIBiLS allow fully customizable search in semantically enriched contents, based on keywords, and\u002For mapped biomedical entities from a growing set of standardized and legacy vocabularies. Built on modern technologies scalable to big data, SIBiLS are freely accessible via REST APIs and are ready to empower any curation workflow.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=28ogsBJYgLQ",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fpatrick-ruch-group\" rel=\"noopener noreferrer nofollow\"\u003EText Mining group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fh,title:fi,slug:fj,pinned:e,types:[{id:c,icon:c,title:g}],url:fk,documentation_url:fl,tutorial_url:a,short_description:fm,license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:h,title:r,icon:l,children:[]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fn,updated_at:fo,description:"Nextclade aligns viral genomes to a reference sequence, calculates several quality control (QC) metrics, assigns sequences to a clade or variant, and identifies changes in the viral proteins relative to the reference sequence, enabling an easy, fast, and decentralized analysis of initial data. Nextclade is available as a command-line tool and as a web application with completely client based processing, meaning that sequence data doesn鈥檛 leave the user鈥檚 browser.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Frichard-neher-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EMicrobial Evolution group\u003C\u002Fu\u003E\u003C\u002Fa\u003E\u003Cu\u003E \u003C\u002Fu\u003Eand supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fp,title:fq,slug:fr,pinned:S,types:[{id:c,icon:c,title:g}],url:fs,documentation_url:ft,tutorial_url:fu,short_description:fv,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:fw,updated_at:fx,description:"V-pipe is the bioinformatics pipeline that integrates various open-source software packages for assessing viral genetic diversity from next-generation sequencing (NGS) data derived from intra-host virus populations.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 V-pipe enables reliable and comparable viral pathogen genomics and epidemiological studies and facilitates clinical diagnostics of viruses.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=qHEUVJZsgE4",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fy,title:fz,slug:fA,pinned:e,types:[{id:c,icon:c,title:g}],url:fB,documentation_url:fC,tutorial_url:a,short_description:fD,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fE,updated_at:fF,description:"raxmlGUI 2.0 seamlessly integrates RAxML and RAxML-NG binaries for all major operating systems with an intuitive graphical front鈥恊nd to setup and run phylogenetic analyses. It offers automated pipelines for analyses that require multiple calls of RAxML, built鈥恑n functions to concatenate alignment files, and one鈥恈lick model testing to select the best substitution models using ModelTest鈥怤G.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_self\" rel=\"nofollow noopener noreferrer\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdaniele-silvestro-group\" tt-mode=\"url\"\u003EComputational Evolutionary Paleobiology group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fG,title:fH,slug:fI,pinned:e,types:[{id:c,icon:c,title:g}],url:aJ,documentation_url:aK,tutorial_url:aL,short_description:fJ,license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:K,title:P,icon:F,children:[]}],created_at:fK,updated_at:fL,description:"SWISS-MODEL is a fully automated web based protein structure homology-modeling expert system. The SWISS-MODEL Workspace is a web-based integrated service which assists and guides the user in building protein homology models at different levels of complexity. A personal working environment (workspace), where several modelling projects can be carried out in parallel, is provided for each user.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ftorsten-schwede-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Structural Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:C,title:fM,slug:fN,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fO,documentation_url:fP,tutorial_url:a,short_description:fQ,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:fR,description:"HAMAP is a system for the classification and annotation of protein sequences. It consists of a collection of manually curated family profiles for protein classification, and associated, manually created annotation rules that specify annotations that apply to family members. HAMAP is applied to bacterial, archaeal and eukaryotic proteins and used to annotate records in UniProtKB via UniProt's automatic annotation pipeline.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fS,title:fT,slug:fU,pinned:e,types:[{id:c,icon:c,title:g}],url:fV,documentation_url:fW,tutorial_url:a,short_description:fX,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fY,updated_at:fZ,description:"REALPHY (Reference sequence Alignment based Phylogeny builder) is an online pipeline that infers phylogenetic trees from whole genome sequence data. The user only has to provide genome sequences in FASTA, GenBank or FASTQ formats. Phylogenetic trees are inferred using PhyML from these sequences. The alignments, tree files and information on SNPs and deleted sites are available for download after the analysis is finished.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:f_,title:f$,slug:ga,pinned:e,types:[{id:c,icon:c,title:g}],url:gb,documentation_url:gc,tutorial_url:gd,short_description:ge,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:gf,updated_at:gg,description:"Version of V-pipe specifically adapted to analyze high-throughput sequencing data of SARS-CoV-2. The V-pipe sars-cov2 branch is continuously updated with improvements and extensions, including on the visualization and reporting of results. \u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\nThis resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=pIby1UooK94",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EComputational Biology group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gh,title:gi,slug:gj,pinned:e,types:[{id:c,icon:c,title:g}],url:gk,documentation_url:a,tutorial_url:a,short_description:gl,license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:gm,updated_at:gn,description:"The software suite ShoRAH (Short Reads Assembly into Haplotypes) is used for the analysis of next generation sequencing data designed to analyse genetically heterogeneous samples. It can be used to provide error correction, haplotype reconstruction and estimation of the frequency of the different genetic variants present in a mixed sample.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fniko-beerenwinkel-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Biology group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:go,title:gp,slug:gq,pinned:e,types:[{id:c,icon:c,title:g}],url:gr,documentation_url:gs,tutorial_url:gt,short_description:gu,license_type:a,categories:[{id:K,title:P,icon:F,children:[]}],created_at:gv,updated_at:gw,description:"The OpenStructure library project aims to provide an open-source, modular, flexible, molecular modelling and visualization environment. It is targeted at interested users and method developers in the field of structural bioinformatics. Its cleanly designed API, available in both Python and C++, provides a command line interface for batch processing, as well as a graphical user interface fully scriptable in Python.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ftorsten-schwede-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Structural Biology group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gx,title:gy,slug:gz,pinned:e,types:[{id:c,icon:c,title:g}],url:gA,documentation_url:a,tutorial_url:a,short_description:gB,license_type:a,categories:[{id:G,title:U,icon:l,children:[]}],created_at:gC,updated_at:gD,description:"Novel concept of a benchmarking platform of computational tools for metagenome composition assessments that introduces: a continuous integration of tools, their multi-objective ranking, and an effective distribution through software containers. We see it as eventually becoming a community-driven effort where method developers can showcase novel approaches and get unbiased benchmarks for publications, while users can make informed choices and obtain standardised and easy-to-use tools.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fevgeny-zdobnov-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EComputational Evolutionary Genomics group\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gE,title:gF,slug:gG,pinned:e,types:[{id:c,icon:c,title:g}],url:gH,documentation_url:gI,tutorial_url:gJ,short_description:gK,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:gL,updated_at:gM,description:"SwissParam is a fully automatic server that provides topology and parameters for small organic molecules, compatible with the CHARMM all atoms force field, for use with CHARMM and GROMACS.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Folivier-michielin-vincent-zoete-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EMolecular Modelling group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gN,title:gO,slug:gP,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:gQ,documentation_url:gR,tutorial_url:a,short_description:gS,license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:gT,updated_at:gU,description:"CAMEO continuously evaluates the accuracy and reliability of protein structure prediction servers in a fully automated manner on a weekly basis. CAMEO currently assesses predictions of 3D protein structure modelling (including complexes) and model quality estimation. The project is publicly available and has been used by method developer groups to benchmark and monitor their servers and new developments.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 Predictions are evaluated against PDB reference structures on a weekly basis.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ftorsten-schwede-group\" rel=\"noopener noreferrer nofollow\"\u003EComputational Structural Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:gV,title:gW,slug:gX,pinned:e,types:[{id:c,icon:c,title:g}],url:gY,documentation_url:a,tutorial_url:gZ,short_description:g_,license_type:{id:J,title:g$,link_url:ha,link_label:hb,created_at:b,updated_at:hc},categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hd,updated_at:he,description:"MARA models genome-wide expression (RNA-Seq, microarray) and epigenetic (ChIP-Seq) data in terms of our genome-wide annotations of regulatory sites. For a given expression data-set it infers the key transcription regulators, their condition-dependent activities, and their genome-wide targets.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=oma9RDHk9ww",group_info:aM},{id:hf,title:hg,slug:hh,pinned:e,types:[{id:c,icon:c,title:g}],url:hi,documentation_url:a,tutorial_url:a,short_description:hj,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hk,updated_at:hl,description:"CREMA is an online tool which automatically infers regulatory networks from chromatin accessibility (ATAC\u002FDNase-seq) or enhancer mark (ChIP-seq) data. CREMA directly processes raw data of a set of samples (FASTQ files), identifies cis-regulatory elements (CREs) , infers key transcription factors driving the observed chromatin state changes across the experimental conditions, and makes detailed predictions regarding their regulatory roles.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=jth2iKiX5d8",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:hm,title:hn,slug:ho,pinned:e,types:[{id:c,icon:c,title:g}],url:hp,documentation_url:a,tutorial_url:a,short_description:hq,license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hr,updated_at:hs,description:"CRUNCH is a completely automated pipe-line for ChIP-seq data analysis, starting from raw sequencing reads, through quality filtering, read mapping, fragment size estimation, peak calling, peak annotation and comprehensive regulatory motif analysis.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕CRUNCH analyses human, mouse, rat and Drosophila data.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=iVajvTtM9jo",group_info:aM},{id:ht,title:hu,slug:hv,pinned:e,types:[{id:c,icon:c,title:g}],url:hw,documentation_url:hx,tutorial_url:a,short_description:hy,license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hz,updated_at:hA,description:"Phylogibbs is an algorithm for discovering regulatory sites in a collection of DNA sequences, including multiple alignments of orthologous sequences from related organisms.The algorithm uses a Gibbs sampling strategy, takes the phylogenetic relationships of the input sequences rigorously into account, and assigns realistic posterior probabilities to reported sites using a novel annealing+tracking strategy.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:hB,title:hC,slug:hD,pinned:e,types:[{id:c,icon:c,title:g}],url:hE,documentation_url:a,tutorial_url:a,short_description:hF,license_type:a,categories:[{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hG,updated_at:hH,description:"The DWT site provides access to the dinucleotide weight tensor (DWT) toolbox that allows users to train a DWT from a set of input sequences, use a DWT to predict binding sites and overall binding energies. The site includes an online tool called Dilogo to generate graphical representation of dinucleotide weight tensors.",media_url:a,group_info:aM},{id:hI,title:hJ,slug:hK,pinned:e,types:[{id:c,icon:c,title:g}],url:hL,documentation_url:hM,tutorial_url:a,short_description:hN,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:hO,updated_at:hP,description:"Scan several protein sequences or a whole genome (all ORFs) against HAMAP family profiles. Sequences that match HAMAP profiles will be annotated in the UniProtKB format by the associated annotation rules.",media_url:a,group_info:ah},{id:hQ,title:hR,slug:hS,pinned:e,types:[{id:d,icon:d,title:n}],url:hT,documentation_url:hU,tutorial_url:a,short_description:hV,license_type:{id:q,title:hW,link_url:hX,link_label:hY,created_at:b,updated_at:hZ},categories:[{id:f,title:j,icon:k,children:[]}],created_at:h_,updated_at:h$,description:"A SPARQL endpoint using the annotation rules from the HAMAP protein classification and annotation system, which can be used to automatically generate Swiss-Prot style annotation, based on protein family membership. HAMAP rules have been translated into queries in the W3C standard SPARQL 1.1 syntax, and can be used to generate portable genome and proteome annotation pipelines, to be run without recourse to custom software.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESwiss-Prot group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:ia,title:ib,slug:ic,pinned:e,types:[{id:c,icon:c,title:g}],url:id,documentation_url:ie,tutorial_url:a,short_description:if0,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ig,updated_at:ih,description:"A tool to quantify MALDI peptides (SILAC) from Phenyx output",media_url:a,group_info:ah}]}}],fetch:{},error:a,state:{"resources-filters":{categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:f,title:j,icon:k,children:[]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]},{id:T,title:aa,icon:ab,children:[]}],types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],filters:[]},resources:{resources:[{id:hB,title:hC,slug:hD,pinned:e,types:[{id:c,icon:c,title:g}],url:hE,documentation_url:a,tutorial_url:a,short_description:hF,license_type:a,categories:[{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hG,updated_at:hH,typesAndCategories:[q,i,c]},{id:T,title:"OMA",slug:"oma",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fhome\u002F",documentation_url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fuses\u002F",tutorial_url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Facademy\u002F",short_description:"Orthology inference among complete genomes",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:"2024-10-16T12:08:05.000000Z",typesAndCategories:[t,d,c]},{id:cK,title:cL,slug:cM,pinned:e,types:[{id:c,icon:c,title:g}],url:cN,documentation_url:a,tutorial_url:a,short_description:cO,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:cP,updated_at:cQ,typesAndCategories:[o,c]},{id:734,title:"GenSpectrum",slug:"genspectrum",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgenspectrum.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Real-time pathogen genomic sequence analysis",license_type:{id:aB,title:aC,link_url:aD,link_label:aE,created_at:an,updated_at:an},categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:"2023-11-20T10:54:32.000000Z",updated_at:"2025-03-11T11:57:37.000000Z",typesAndCategories:[h,B,c]},{id:627,title:"Translate",slug:"translate",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Ftranslate\u002F",documentation_url:a,tutorial_url:a,short_description:"Convert a nucleotide sequence to a protein sequence",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T15:54:51.000000Z",updated_at:"2025-02-03T14:37:37.000000Z",typesAndCategories:[h,q,f,c]},{id:684,title:"COVTriage",slug:"covidtriage",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fcandy.hesge.ch\u002FCOVTriage\u002F",documentation_url:a,tutorial_url:a,short_description:"Rank the COVID-19 literature according to COVoc ontology",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2020-07-22T16:02:32.000000Z",updated_at:"2022-11-03T12:19:39.000000Z",typesAndCategories:[T,c]},{id:615,title:"FastEpistasis",slug:"fastepistasis",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgitlab.sib.swiss\u002Ftschuepb\u002FFastEpistasis",documentation_url:a,tutorial_url:a,short_description:"Tool for quantitative trait epistasis",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-26T18:22:20.000000Z",updated_at:"2024-08-21T12:13:05.000000Z",typesAndCategories:[h,c]},{id:687,title:"OMA SPARQL endpoint",slug:"oma-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.omabrowser.org\u002Flode\u002Fsparql",documentation_url:"https:\u002F\u002Fqfo.github.io\u002FOrthologyOntology\u002F",tutorial_url:a,short_description:"SPARQL access to the OMA Orthology database",license_type:{id:22,title:"a Creative Commons Attribution-ShareAlike 2.5 Generic license",link_url:"https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-sa\u002F2.5\u002F",link_label:"CC BY-SA 2.5",created_at:"2020-08-27T12:12:58.000000Z",updated_at:"2022-04-14T10:29:53.000000Z"},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-08-27T12:09:07.000000Z",updated_at:"2024-10-16T12:22:08.000000Z",typesAndCategories:[t,d]},{id:600,title:"MADAP",slug:"madap",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Fmadap\u002F",documentation_url:a,tutorial_url:a,short_description:"Clustering tool of genomic sites",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-26T16:03:01.000000Z",updated_at:"2024-07-31T10:14:57.000000Z",typesAndCategories:[h,c]},{id:bD,title:bE,slug:bF,pinned:e,types:[{id:d,icon:d,title:n}],url:bG,documentation_url:bH,tutorial_url:a,short_description:bI,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:bJ,updated_at:bK,typesAndCategories:[i,d]},{id:732,title:"STRING SPARQL endpoint",slug:"string-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.string-db.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to the STRING knowledgebase",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-10-10T12:11:19.000000Z",updated_at:"2024-11-07T12:49:22.000000Z",typesAndCategories:[f,i,d]},{id:ev,title:ew,slug:ex,pinned:S,types:[{id:d,icon:d,title:n}],url:ey,documentation_url:a,tutorial_url:a,short_description:ez,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eA,updated_at:eB,typesAndCategories:[f,o,d]},{id:739,title:"Biodiversity PMC",slug:"biodiversity-pmc",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbiodiversitypmc.sibils.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Search a large collection of scientific publications",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2024-11-04T15:06:25.000000Z",updated_at:"2024-11-04T15:23:40.000000Z",typesAndCategories:[T,c]},{id:710,title:"Variomes",slug:"variomes",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fvariomes.sibils.org\u002F",documentation_url:"https:\u002F\u002Fvariomes.sibils.org\u002Fapis",tutorial_url:"https:\u002F\u002Fvariomes.sibils.org\u002Ftutorial",short_description:"Search engine to support the curation of genomic variants",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2021-06-28T08:08:30.000000Z",updated_at:"2024-11-04T14:10:28.000000Z",typesAndCategories:[T,c]},{id:686,title:"TASer",slug:"taser",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fshiny.bioinformatics.unibe.ch\u002Fapps\u002Ftaser\u002F",documentation_url:a,tutorial_url:a,short_description:"Search tool associated to TASmania",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-07-24T12:42:30.000000Z",updated_at:"2024-07-31T09:44:32.000000Z",typesAndCategories:[h,c]},{id:659,title:"CLASTR",slug:"str-similarity-search-tool",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fstr-search\u002F",documentation_url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fstr-search\u002Fhelp.html",tutorial_url:a,short_description:"Cellosaurus STR similarity search tool",license_type:a,categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T11:31:48.000000Z",updated_at:"2024-11-11T09:36:45.000000Z",typesAndCategories:[i,c]},{id:cZ,title:c_,slug:c$,pinned:e,types:[{id:c,icon:c,title:g}],url:da,documentation_url:db,tutorial_url:a,short_description:dc,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:dd,updated_at:de,typesAndCategories:[o,c]},{id:aT,title:aU,slug:aV,pinned:e,types:[{id:c,icon:c,title:g}],url:aW,documentation_url:aX,tutorial_url:a,short_description:aY,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:aZ,updated_at:a_,typesAndCategories:[f,c]},{id:dK,title:dL,slug:dM,pinned:e,types:[{id:c,icon:c,title:g}],url:dN,documentation_url:dO,tutorial_url:a,short_description:dP,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dQ,updated_at:dR,typesAndCategories:[f,c]},{id:ar,title:eO,slug:eP,pinned:e,types:[{id:d,icon:d,title:n}],url:eQ,documentation_url:eR,tutorial_url:a,short_description:eS,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:eT,typesAndCategories:[f,d]},{id:616,title:"ESTscan",slug:"estscan",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Festscan",documentation_url:a,tutorial_url:a,short_description:"Detect coding regions in EST sequences",license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T18:24:46.000000Z",updated_at:"2024-08-22T13:25:50.000000Z",typesAndCategories:[m,c]},{id:gx,title:gy,slug:gz,pinned:e,types:[{id:c,icon:c,title:g}],url:gA,documentation_url:a,tutorial_url:a,short_description:gB,license_type:a,categories:[{id:G,title:U,icon:l,children:[]}],created_at:gC,updated_at:gD,typesAndCategories:[G,c]},{id:gN,title:gO,slug:gP,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:gQ,documentation_url:gR,tutorial_url:a,short_description:gS,license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:gT,updated_at:gU,typesAndCategories:[f,u,d,c]},{id:699,title:"SPSP | Swiss Pathogen Surveillance Platform",slug:"spsp",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fspsp.sib.swiss\u002F",documentation_url:"https:\u002F\u002Fspsp.sib.swiss\u002Fdocs\u002F",tutorial_url:a,short_description:"Public Swiss pathogen NGS data",license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-12-01T11:25:05.000000Z",updated_at:"2025-03-17T16:05:42.000000Z",typesAndCategories:[m,d,c]},{id:eC,title:eD,slug:eE,pinned:e,types:[{id:d,icon:d,title:n}],url:eF,documentation_url:a,tutorial_url:a,short_description:eG,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:eH,updated_at:eI,typesAndCategories:[f,o,d]},{id:733,title:"BEAST2",slug:"beast",pinned:S,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.beast2.org\u002F",documentation_url:"https:\u002F\u002Fwww.beast2.org\u002Ffaq\u002F",tutorial_url:"https:\u002F\u002Ftaming-the-beast.org\u002Ftutorials\u002F",short_description:"Bayesian evolutionary analysis by sampling trees",license_type:{id:27,title:"the GNU Lesser General Public License v2.1",link_url:"https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fold-licenses\u002Flgpl-2.1.en.html",link_label:"GNU LGPL v2.1",created_at:ii,updated_at:ii},categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:B,title:N,icon:I,children:[]}],created_at:"2023-11-20T10:40:21.000000Z",updated_at:"2025-01-20T12:39:53.000000Z",typesAndCategories:[m,B,c]},{id:724,title:"ModelArchive",slug:"modelarchive",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fmodelarchive.org\u002F",documentation_url:"https:\u002F\u002Fmodelarchive.org\u002Fhelp",tutorial_url:a,short_description:"Repository of predicted macromolecular structure models",license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-02-13T09:09:24.000000Z",updated_at:"2024-09-26T15:01:41.000000Z",typesAndCategories:[u,d]},{id:726,title:"CAPTAIN",slug:"captain",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.captain-project.net\u002F",documentation_url:a,tutorial_url:a,short_description:"Decision-support tool for conservation area prioritization",license_type:{id:B,title:aF,link_url:aG,link_label:aH,created_at:b,updated_at:aI},categories:[{id:B,title:N,icon:I,children:[]}],created_at:"2023-04-20T07:24:41.000000Z",updated_at:"2024-08-22T15:14:50.000000Z",typesAndCategories:[B,c]},{id:737,title:"SIBiLS SPARQL endpoint",slug:"sibils-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.sibils.org\u002Fsparql",documentation_url:"https:\u002F\u002Fsibils.org\u002Fapi\u002Fsparql\u002Fsibils-ontology.html",tutorial_url:a,short_description:"SPARQL access to SIBiLS, the SIB Literature Services",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2024-07-09T05:43:53.000000Z",updated_at:"2025-01-17T10:30:46.000000Z",typesAndCategories:[T,d]},{id:685,title:"TASmania",slug:"tasmania",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fshiny.bioinformatics.unibe.ch\u002Fapps\u002Ftasmania\u002F",documentation_url:a,tutorial_url:a,short_description:"Toxin-antitoxin database",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-07-24T12:39:30.000000Z",updated_at:"2024-08-15T09:42:59.000000Z",typesAndCategories:[h,d]},{id:fy,title:fz,slug:fA,pinned:e,types:[{id:c,icon:c,title:g}],url:fB,documentation_url:fC,tutorial_url:a,short_description:fD,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fE,updated_at:fF,typesAndCategories:[t,c]},{id:735,title:"Protein Universe Atlas",slug:"protein-universe-atlas",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Funiprot3d.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Interactive, annotated similarity network of all proteins",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2024-01-25T14:33:56.000000Z",updated_at:"2024-09-26T16:00:07.000000Z",typesAndCategories:[f,i,d]},{id:f_,title:f$,slug:ga,pinned:e,types:[{id:c,icon:c,title:g}],url:gb,documentation_url:gc,tutorial_url:gd,short_description:ge,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:gf,updated_at:gg,typesAndCategories:[h,C,c]},{id:671,title:"ScanProsite",slug:"scanprosite",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002F",documentation_url:"https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002Fscanprosite_doc.html",tutorial_url:a,short_description:"Protein sequences against PROSITE",license_type:{id:aN,title:_,link_url:ij,link_label:ik,created_at:il,updated_at:im},categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-07-01T18:48:11.000000Z",updated_at:"2025-02-11T10:22:31.000000Z",typesAndCategories:[f,c]},{id:602,title:"IScan",slug:"iscan",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FIScan\u002Findex.html",documentation_url:a,tutorial_url:a,short_description:"Insertion sequence identification in whole genomes",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-26T16:18:37.000000Z",updated_at:"2022-10-05T12:03:38.000000Z",typesAndCategories:[h,c]},{id:674,title:"SwissDrugDesign",slug:"swissdrugdesign",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.molecular-modelling.ch\u002Fswiss-drug-design.html",documentation_url:a,tutorial_url:a,short_description:"Widening access to computer-aided drug design",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:O,title:X,icon:F,children:[]},{id:J,title:R,icon:F,children:[]}],created_at:"2020-07-06T07:14:50.000000Z",updated_at:"2024-10-21T15:13:10.000000Z",typesAndCategories:[O,J,d,c]},{id:gV,title:gW,slug:gX,pinned:e,types:[{id:c,icon:c,title:g}],url:gY,documentation_url:a,tutorial_url:gZ,short_description:g_,license_type:{id:J,title:g$,link_url:ha,link_label:hb,created_at:b,updated_at:hc},categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hd,updated_at:he,typesAndCategories:[h,q,i,c]},{id:fa,title:fb,slug:fc,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fd,documentation_url:a,tutorial_url:a,short_description:fe,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:ff,updated_at:fg,typesAndCategories:[T,d,c]},{id:bp,title:bq,slug:br,pinned:e,types:[{id:c,icon:c,title:g}],url:bs,documentation_url:a,tutorial_url:a,short_description:bt,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:bu,updated_at:bv,typesAndCategories:[f,c]},{id:O,title:bj,slug:bk,pinned:e,types:[{id:d,icon:d,title:n}],url:bl,documentation_url:a,tutorial_url:bm,short_description:bn,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:bo,typesAndCategories:[m,f,u,d]},{id:o,title:"STRING",slug:"string",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fstring-db.org\u002F",documentation_url:"https:\u002F\u002Fstring-db.org\u002Fcgi\u002Fhelp",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=o208DwyFbNk&list=PLjnQS7gxY4Ar6VukbDHp0q0atJAFDWkRX",short_description:"Protein-protein interaction networks and enrichment analysis",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:"2024-11-07T13:22:53.000000Z",typesAndCategories:[f,i,d,c]},{id:614,title:in0,slug:in0,pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fcmpg.unibe.ch\u002Fsoftware\u002Ffastsimcoal2\u002F",documentation_url:a,tutorial_url:a,short_description:"Fast sequential Markov coalescent simulation of genomic data",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:"2020-06-26T18:18:13.000000Z",updated_at:"2024-08-22T15:16:17.000000Z",typesAndCategories:[h,B,C,c]},{id:720,title:"MetaNetX SPARQL endpoint",slug:"metanetx-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Frdf.metanetx.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to MetaNetX",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:z,title:E,icon:p,children:[]}],created_at:"2022-09-16T09:47:08.000000Z",updated_at:"2025-01-09T15:40:17.000000Z",typesAndCategories:[f,z,d]},{id:648,title:"Decrease redundancy",slug:"decrease-redundancy",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Fdecrease_redundancy\u002F",documentation_url:a,tutorial_url:a,short_description:"Redundancy reduction in a set of sequences",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-07-01T09:41:48.000000Z",updated_at:"2025-02-20T14:41:52.000000Z",typesAndCategories:[f,c]},{id:740,title:"EnzChemRED",slug:"enzchemred",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Frhea\u002Fnlp\u002F",documentation_url:"https:\u002F\u002Fpmc.ncbi.nlm.nih.gov\u002Farticles\u002FPMC11384730\u002F",tutorial_url:a,short_description:"Enzyme Chemistry Relation Extraction Dataset",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2024-11-18T08:54:45.000000Z",updated_at:"2024-11-18T12:00:56.000000Z",typesAndCategories:[f,d]},{id:558,title:"UniLectin",slug:"unilectin",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Funilectin.unige.ch\u002F",documentation_url:"https:\u002F\u002Funilectin.unige.ch\u002Fpages\u002Fabout",tutorial_url:a,short_description:"Structural and functional classification of lectins",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:"2020-06-22T12:10:25.000000Z",updated_at:"2024-12-05T15:57:51.000000Z",typesAndCategories:[f,o,d]},{id:727,title:"Glittr",slug:"glittr",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fglittr.org",documentation_url:a,tutorial_url:a,short_description:"Git repositories with bioinformatics training material",license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2023-05-22T09:22:22.000000Z",updated_at:"2024-10-24T08:57:39.000000Z",typesAndCategories:[h,q,d]},{id:eJ,title:eK,slug:eL,pinned:e,types:[{id:c,icon:c,title:g}],url:eM,documentation_url:a,tutorial_url:a,short_description:eN,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:as,updated_at:as,typesAndCategories:[o,c]},{id:q,title:"PROSITE",slug:"prosite",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fprosite.expasy.org\u002F",documentation_url:"https:\u002F\u002Fprosite.expasy.org\u002Fprosuser.html",tutorial_url:a,short_description:"Protein family and domain database",license_type:{id:aN,title:_,link_url:ij,link_label:ik,created_at:il,updated_at:im},categories:[{id:f,title:j,icon:k,children:[]}],created_at:Y,updated_at:"2025-03-11T11:43:56.000000Z",typesAndCategories:[f,d]},{id:560,title:"EPD",slug:"epd",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fepd.expasy.org\u002Fepd",documentation_url:a,tutorial_url:a,short_description:"Eukaryotic Promoter Database",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-22T13:08:46.000000Z",updated_at:"2024-07-18T11:28:24.000000Z",typesAndCategories:[h,d]},{id:dv,title:dw,slug:dx,pinned:e,types:[{id:c,icon:c,title:g}],url:dy,documentation_url:a,tutorial_url:a,short_description:dz,license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:dA,updated_at:dB,typesAndCategories:[o,c]},{id:ia,title:ib,slug:ic,pinned:e,types:[{id:c,icon:c,title:g}],url:id,documentation_url:ie,tutorial_url:a,short_description:if0,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ig,updated_at:ih,typesAndCategories:[f,c]},{id:736,title:"OMArk",slug:"omark",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fomark.omabrowser.org\u002F",documentation_url:a,tutorial_url:a,short_description:"OMArk determines the quality and completeness of gene sets",license_type:{id:26,title:"the GNU Lesser General Public License v3.0",link_url:"https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Flgpl-3.0.en.html",link_label:"GNU LGPL v3",created_at:io,updated_at:io},categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2024-03-01T14:01:52.000000Z",updated_at:"2024-10-16T13:14:24.000000Z",typesAndCategories:[f,c]},{id:599,title:"miRmap",slug:"mirmap",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fmirmap.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fmirmap.ezlab.org\u002F#documentation",tutorial_url:"https:\u002F\u002Fmirmap.ezlab.org\u002Fstatic\u002Fhelp\u002Findex.html",short_description:"Prediction of microRNA target repression strength",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2020-06-26T15:50:25.000000Z",updated_at:"2024-10-16T09:14:09.000000Z",typesAndCategories:[h,q,c]},{id:t,title:"SwissDock",slug:"swissdock",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.swissdock.ch\u002F",documentation_url:"https:\u002F\u002Fwww.swissdock.ch\u002Fdocumentation.php",tutorial_url:"https:\u002F\u002Fwww.swissdock.ch\u002Ftutorials.php",short_description:"Docking of small ligands into protein active sites",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:J,title:R,icon:F,children:[]}],created_at:am,updated_at:"2024-10-21T12:50:03.000000Z",typesAndCategories:[f,u,J,c]},{id:C,title:fM,slug:fN,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:fO,documentation_url:fP,tutorial_url:a,short_description:fQ,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:fR,typesAndCategories:[f,d,c]},{id:714,title:"OMAMO",slug:"omamo",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fomamo\u002F",documentation_url:"https:\u002F\u002Fdoi.org\u002F10.1093\u002Fbioinformatics\u002Fbtac163",tutorial_url:a,short_description:"OMAMO allows the user to find the best simple model organism",license_type:a,categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T07:35:13.000000Z",updated_at:"2024-10-16T13:39:01.000000Z",typesAndCategories:[i,c]},{id:633,title:"ABCD",slug:"abcd",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fweb.expasy.org\u002Fabcd\u002F",documentation_url:a,tutorial_url:a,short_description:"Database of chemically defined antibodies",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T17:01:34.000000Z",updated_at:"2025-03-11T11:52:15.000000Z",typesAndCategories:[h,f,d]},{id:hm,title:hn,slug:ho,pinned:e,types:[{id:c,icon:c,title:g}],url:hp,documentation_url:a,tutorial_url:a,short_description:hq,license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hr,updated_at:hs,typesAndCategories:[h,q,i,c]},{id:577,title:"SNP2TFBS",slug:"snp2tfbs",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Fsnp2tfbs\u002F",documentation_url:a,tutorial_url:a,short_description:"Regulatory SNPs affecting TF binding site affinity",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-24T09:46:33.000000Z",updated_at:"2024-07-31T10:13:41.000000Z",typesAndCategories:[h,d,c]},{id:664,title:"ISA",slug:"isa",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ISA",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ISA#Tutorials",short_description:"Finding modules in gene expression data",license_type:a,categories:[{id:q,title:A,icon:l,children:[]}],created_at:"2020-07-01T18:20:43.000000Z",updated_at:"2024-08-21T13:10:22.000000Z",typesAndCategories:[q,c]},{id:557,title:"Arlequin",slug:"arlequin",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fcmpg.unibe.ch\u002Fsoftware\u002Farlequin35\u002F",documentation_url:a,tutorial_url:a,short_description:"An integrated software for population genetics data analysis",license_type:a,categories:[{id:C,title:Q,icon:I,children:[]}],created_at:"2020-06-22T10:05:21.000000Z",updated_at:"2024-08-21T13:32:18.000000Z",typesAndCategories:[C,c]},{id:563,title:"SwissTargetPrediction",slug:"swisstargetprediction",pinned:e,types:[{id:c,icon:c,title:g}],url:"http:\u002F\u002Fwww.swisstargetprediction.ch\u002F",documentation_url:"http:\u002F\u002Fwww.swisstargetprediction.ch\u002Fhelp.php",tutorial_url:a,short_description:"Target prediction for bioactive small molecules",license_type:{id:ar,title:aO,link_url:aP,link_label:aQ,created_at:aR,updated_at:aS},categories:[{id:f,title:j,icon:k,children:[]},{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:"2020-06-22T13:38:35.000000Z",updated_at:"2024-10-21T14:22:58.000000Z",typesAndCategories:[f,J,K,c]},{id:698,title:"Rhea SPARQL endpoint",slug:"sparql-rhea-db-org",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.rhea-db.org",documentation_url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Frhea\u002Frdf\u002Frhea_rdf_documentation.pdf",tutorial_url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fsparql-training\u002Ftree\u002Fmaster\u002Frhea",short_description:"SPARQL access to the Rhea knowledgebase",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]},{id:z,title:E,icon:p,children:[]}],created_at:"2020-11-25T10:00:22.000000Z",updated_at:"2024-11-11T10:42:44.000000Z",typesAndCategories:[f,i,z,d]},{id:744,title:"Sanity",slug:"sanity",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgithub.com\u002FnimwegenLab\u002FSanity",documentation_url:"https:\u002F\u002Fdoi.org\u002F10.1038\u002Fs41587-021-00875-x",tutorial_url:"https:\u002F\u002Fgithub.com\u002FnimwegenLab\u002FSanity\u002Fblob\u002Fmaster\u002FREADME.md",short_description:"Single-cell RNA-Seq normalization method",license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2025-01-31T08:27:27.000000Z",updated_at:"2025-02-03T12:24:42.000000Z",typesAndCategories:[q,i,c]},{id:694,title:ip,slug:ip,pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbioconductor.org\u002Fpackages\u002Frelease\u002Fbioc\u002Fhtml\u002Frawrr.html",documentation_url:"https:\u002F\u002Fpubs.acs.org\u002Fdoi\u002F10.1021\u002Facs.jproteome.0c00866",tutorial_url:a,short_description:"R package for fast reading Thermo Fisher Scientific MS data",license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:f,title:j,icon:k,children:[]},{id:z,title:E,icon:p,children:[]}],created_at:"2020-11-12T07:01:35.000000Z",updated_at:"2024-08-22T15:37:48.000000Z",typesAndCategories:[f,z,c]},{id:675,title:"SwissRegulon Portal",slug:"swissregulon-portal",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fpages\u002F",documentation_url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fpages\u002Fdocumentation",tutorial_url:a,short_description:"Tools and data for regulatory genomics",license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-06T07:19:42.000000Z",updated_at:"2024-10-24T09:36:05.000000Z",typesAndCategories:[m,h,q,t,i,d,c]},{id:626,title:"UniProtKB\u002FSwiss-Prot",slug:"uniprotkb-swiss-prot",pinned:S,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.uniprot.org\u002Funiprotkb?facets=reviewed%3Atrue&query=%2A",documentation_url:iq,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=JSQj_Y1xMgo",short_description:"Protein knowledgebase",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T15:41:28.000000Z",updated_at:"2025-01-20T12:26:27.000000Z",typesAndCategories:[f,d]},{id:681,title:"Computational Linguistics for COVID-19",slug:"computational-linguistics-for-covid-19",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fcovid19.nlp.idsia.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"Central hub in computational linguistics for COVID-19",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2020-07-14T07:46:47.000000Z",updated_at:"2024-08-15T14:43:29.000000Z",typesAndCategories:[T,c]},{id:G,title:"Selectome",slug:"selectome",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fselectome.org\u002F",documentation_url:"https:\u002F\u002Fselectome.org\u002Feuteleostomi\u002Fguide",tutorial_url:a,short_description:"Database of positive selection",license_type:{id:m,title:aw,link_url:ax,link_label:ay,created_at:b,updated_at:az},categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:Y,updated_at:"2024-11-11T09:33:10.000000Z",typesAndCategories:[h,B,d]},{id:655,title:"Click2Drug",slug:"click2drug",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.click2drug.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Directory of computational drug design tools",license_type:{id:ar,title:aO,link_url:aP,link_label:aQ,created_at:aR,updated_at:aS},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:O,title:X,icon:F,children:[]},{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:"2020-07-01T11:03:55.000000Z",updated_at:"2024-10-21T15:12:25.000000Z",typesAndCategories:[f,u,O,J,K,d]},{id:aN,title:"Cellosaurus",slug:"cellosaurus",pinned:S,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.cellosaurus.org\u002F",documentation_url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fdescription.html",tutorial_url:"https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_CLLRS",short_description:"Knowledge resource on cell lines",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:"2024-11-11T09:35:48.000000Z",typesAndCategories:[i,d]},{id:663,title:"CT-CBN",slug:"ct-cbn",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbsse.ethz.ch\u002Fcbg\u002Fsoftware\u002Fct-cbn.html",documentation_url:a,tutorial_url:a,short_description:"Estimate conjunctive Bayesian networks",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:"2020-07-01T18:16:11.000000Z",updated_at:"2024-09-13T13:17:19.000000Z",typesAndCategories:[h,B,c]},{id:692,title:"UniProt SPARQL endpoint",slug:"uniprot-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.uniprot.org",documentation_url:"https:\u002F\u002Fpurl.uniprot.org\u002Fhtml\u002Findex-en.html#",tutorial_url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fsparql-training\u002Ftree\u002Fmaster\u002Funiprot",short_description:"SPARQL access to UniProt and related data",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-10-27T11:07:43.000000Z",updated_at:"2024-11-11T15:11:26.000000Z",typesAndCategories:[f,d]},{id:ht,title:hu,slug:hv,pinned:e,types:[{id:c,icon:c,title:g}],url:hw,documentation_url:hx,tutorial_url:a,short_description:hy,license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hz,updated_at:hA,typesAndCategories:[h,i,c]},{id:bw,title:bx,slug:by,pinned:e,types:[{id:c,icon:c,title:g}],url:bz,documentation_url:a,tutorial_url:a,short_description:bA,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:s,icon:p,children:[]}],created_at:bB,updated_at:bC,typesAndCategories:[o,c]},{id:gh,title:gi,slug:gj,pinned:e,types:[{id:c,icon:c,title:g}],url:gk,documentation_url:a,tutorial_url:a,short_description:gl,license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:gm,updated_at:gn,typesAndCategories:[h,c]},{id:18,title:"SwissLipids",slug:"swisslipids",pinned:S,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swisslipids.org\u002F#\u002F",documentation_url:a,tutorial_url:a,short_description:"Knowledge resource for lipids",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:D,title:H,icon:p,children:[]}],created_at:am,updated_at:"2024-11-08T13:34:17.000000Z",typesAndCategories:[f,D,d]},{id:en,title:eo,slug:ep,pinned:e,types:[{id:c,icon:c,title:g}],url:eq,documentation_url:er,tutorial_url:a,short_description:es,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:et,updated_at:eu,typesAndCategories:[f,c]},{id:19,title:"MetaNetX",slug:"metanetx",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.metanetx.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Metabolic network repository & analysis",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:z,title:E,icon:p,children:[]}],created_at:Y,updated_at:"2025-01-09T15:39:49.000000Z",typesAndCategories:[f,z,d,c]},{id:576,title:"SSA",slug:"ssa",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Fssa\u002F",documentation_url:a,tutorial_url:a,short_description:"Analysis of nucleic acid sequence motifs",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-24T09:37:25.000000Z",updated_at:"2024-07-31T10:12:26.000000Z",typesAndCategories:[h,c]},{id:568,title:"SwissRegulon",slug:"swissregulon",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fsr\u002Fswissregulon",documentation_url:a,tutorial_url:a,short_description:"Database of genome-wide annotations of regulatory sites",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-23T17:12:32.000000Z",updated_at:"2024-11-06T15:14:19.000000Z",typesAndCategories:[h,q,i,d]},{id:623,title:"BUSCO",slug:"busco",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbusco.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fbusco.ezlab.org\u002Fbusco_userguide.html",tutorial_url:a,short_description:"From QC to gene prediction and phylogenomics",license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:"2020-06-30T15:15:24.000000Z",updated_at:"2024-10-16T08:27:40.000000Z",typesAndCategories:[h,q,B,c]},{id:K,title:"Bgee",slug:"bgee",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.bgee.org\u002F",documentation_url:ir,tutorial_url:ir,short_description:"Gene expression expertise",license_type:{id:m,title:aw,link_url:ax,link_label:ay,created_at:b,updated_at:az},categories:[{id:q,title:A,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:Y,updated_at:"2024-11-11T09:33:41.000000Z",typesAndCategories:[q,B,d,c]},{id:658,title:"Dotlet",slug:"dotlet",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fdotlet",documentation_url:a,tutorial_url:a,short_description:"Regions of close similarity in 2 sequences",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-07-01T11:17:43.000000Z",updated_at:"2024-08-21T13:43:42.000000Z",typesAndCategories:[f,c]},{id:588,title:"PACMAN",slug:"pacman",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbugfri.unibe.ch\u002Fpacman\u002F",documentation_url:a,tutorial_url:a,short_description:"Publication quality images of DNA locations",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-24T11:29:27.000000Z",updated_at:"2024-07-16T15:35:14.000000Z",typesAndCategories:[h,c]},{id:b$,title:ca,slug:cb,pinned:e,types:[{id:c,icon:c,title:g}],url:cc,documentation_url:a,tutorial_url:a,short_description:cd,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ce,updated_at:cf,typesAndCategories:[f,c]},{id:hf,title:hg,slug:hh,pinned:e,types:[{id:c,icon:c,title:g}],url:hi,documentation_url:a,tutorial_url:a,short_description:hj,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:hk,updated_at:hl,typesAndCategories:[m,i,c]},{id:688,title:"Bgee SPARQL endpoint",slug:"bgee-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.bgee.org\u002Fsparql\u002F",documentation_url:"http:\u002F\u002Fbiosoda.expasy.org\u002Fgenex\u002F",tutorial_url:"https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorial-query-bgee-knowledge-graph-sparql",short_description:"SPARQL access to the Bgee gene expression database",license_type:{id:m,title:aw,link_url:ax,link_label:ay,created_at:b,updated_at:az},categories:[{id:q,title:A,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:"2020-08-27T12:22:02.000000Z",updated_at:"2024-09-11T11:24:33.000000Z",typesAndCategories:[q,B,d]},{id:634,title:"ProtParam",slug:"protparam",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Fprotparam\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fprotparam\u002Fprotparam-doc.html",tutorial_url:a,short_description:"Computation of physico chemical parameters of a protein",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T17:19:33.000000Z",updated_at:"2025-02-03T14:40:41.000000Z",typesAndCategories:[f,c]},{id:h,title:"MyHits",slug:"myhits",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fmyhits.sib.swiss",documentation_url:is,tutorial_url:is,short_description:"Relationships between protein sequences and motifs",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:am,updated_at:"2024-08-15T14:06:15.000000Z",typesAndCategories:[f,d,c]},{id:578,title:"SIBsim4",slug:"sibsim4",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fsourceforge.net\u002Fprojects\u002Fsibsim4\u002F",documentation_url:a,tutorial_url:a,short_description:"Align expressed RNA sequences on a DNA template",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2020-06-24T10:03:12.000000Z",updated_at:"2024-07-18T07:34:40.000000Z",typesAndCategories:[h,q,c]},{id:712,title:"mVIRs",slug:"mvirs",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgithub.com\u002FSushiLab\u002FmVIRs",documentation_url:a,tutorial_url:a,short_description:"Prediction tool for inducible, bacteria-infecting viruses",license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:h,title:r,icon:l,children:[]},{id:G,title:U,icon:l,children:[]}],created_at:"2022-01-13T09:07:01.000000Z",updated_at:"2025-01-27T12:10:19.000000Z",typesAndCategories:[m,h,G,c]},{id:651,title:"UniProt BLAST",slug:"uniprot-blast",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.uniprot.org\u002Fblast\u002F",documentation_url:"https:\u002F\u002Fwww.uniprot.org\u002Fhelp\u002Fblast-submission",tutorial_url:a,short_description:"BLAST sequence similarity search on the UniProt web site",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-07-01T09:59:06.000000Z",updated_at:"2025-02-20T16:21:32.000000Z",typesAndCategories:[f,c]},{id:567,title:"TagScan",slug:"tagscan",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Ftagger\u002Ftagscan.html",documentation_url:a,tutorial_url:a,short_description:"Genome-wide sequence tag scanner",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-06-23T17:03:28.000000Z",updated_at:"2024-08-15T15:45:15.000000Z",typesAndCategories:[h,c]},{id:ef,title:eg,slug:eh,pinned:e,types:[{id:c,icon:c,title:g}],url:ei,documentation_url:ej,tutorial_url:a,short_description:ek,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:el,updated_at:em,typesAndCategories:[f,c]},{id:731,title:"Cellosaurus SPARQL endpoint",slug:"cellosaurus-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fapi.cellosaurus.org\u002Fsparql-editor",documentation_url:"https:\u002F\u002Fapi.cellosaurus.org\u002Frdf-ontology",tutorial_url:a,short_description:"SPARQL access to Cellosaurus",license_type:{id:m,title:aw,link_url:ax,link_label:ay,created_at:b,updated_at:az},categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-10-10T11:55:39.000000Z",updated_at:"2025-03-11T11:56:54.000000Z",typesAndCategories:[i,d]},{id:B,title:"ENZYME",slug:"enzyme",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fenzyme.expasy.org\u002F",documentation_url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Fenzyme\u002Fenzuser.txt",tutorial_url:a,short_description:"Enzyme nomenclature database",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:Y,updated_at:"2025-02-11T12:46:37.000000Z",typesAndCategories:[f,d]},{id:d_,title:d$,slug:ea,pinned:e,types:[{id:c,icon:c,title:g}],url:eb,documentation_url:a,tutorial_url:a,short_description:ec,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:ed,updated_at:ee,typesAndCategories:[f,o,c]},{id:608,title:"Glydin'",slug:"glydin",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fepitopes\u002F",documentation_url:a,tutorial_url:a,short_description:"Network representation of known glycan determinants",license_type:a,categories:[{id:o,title:s,icon:p,children:[]}],created_at:"2020-06-26T17:19:23.000000Z",updated_at:"2020-07-16T12:48:56.000000Z",typesAndCategories:[o,c]},{id:cR,title:cS,slug:cT,pinned:e,types:[{id:d,icon:d,title:n}],url:cU,documentation_url:cV,tutorial_url:a,short_description:cW,license_type:{id:B,title:aF,link_url:aG,link_label:aH,created_at:b,updated_at:aI},categories:[{id:o,title:s,icon:p,children:[]}],created_at:cX,updated_at:cY,typesAndCategories:[o,d]},{id:654,title:"ChIP-Seq",slug:"chip-seq",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Fchipseq\u002F",documentation_url:a,tutorial_url:a,short_description:"ChIP-Seq data analysis tools",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:"2020-07-01T10:54:53.000000Z",updated_at:"2024-07-31T10:16:47.000000Z",typesAndCategories:[h,c]},{id:716,title:"Swiss-Trees",slug:"swiss-trees",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswisstree.sib.swiss\u002Fcgi-bin\u002Fswisst",documentation_url:a,tutorial_url:a,short_description:"A collection of gold standard gene phylogenies",license_type:a,categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T13:15:34.000000Z",updated_at:"2024-10-16T14:05:39.000000Z",typesAndCategories:[t,d]},{id:f,title:"SWISS-MODEL Repository",slug:"swiss-model-repository",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswissmodel.expasy.org\u002Frepository\u002F",documentation_url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Frepository_help",tutorial_url:a,short_description:"Protein structure homology models",license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:"2024-10-14T14:16:14.000000Z",typesAndCategories:[f,u,d]},{id:705,title:"HMO-Glycologue",slug:"hmo-glycologue",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fglycologue.org\u002Fm\u002F",documentation_url:a,tutorial_url:a,short_description:"Simulator of Human Milk Oligosaccharide synthesis",license_type:a,categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]},{id:o,title:s,icon:p,children:[]}],created_at:"2021-01-21T19:03:24.000000Z",updated_at:"2024-08-21T13:51:01.000000Z",typesAndCategories:[i,o,c]},{id:693,title:"OrthoLoger",slug:"orthologer",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Forthologer.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fwww.orthodb.org\u002Forthodb_userguide.html#standalone-orthologer-software",tutorial_url:a,short_description:"Accurate and scalable inference of groups of orthologs",license_type:a,categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-10-29T07:59:19.000000Z",updated_at:"2024-10-16T11:57:29.000000Z",typesAndCategories:[t,c]},{id:585,title:"Progenetix",slug:"progenetix",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fprogenetix.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Genomic profiles of cancer samples with focus on CNV",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:h,title:r,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-24T11:08:37.000000Z",updated_at:"2024-08-21T13:00:26.000000Z",typesAndCategories:[m,h,i,d,c]},{id:631,title:"RandSeq",slug:"randseq",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Frandseq\u002F",documentation_url:a,tutorial_url:a,short_description:"Random protein sequence generator",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T16:46:44.000000Z",updated_at:"2025-02-19T13:02:47.000000Z",typesAndCategories:[f,c]},{id:738,title:"BiotXplorer",slug:"biotxplorer",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbiotxplorer.sibils.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Biotic interactions from scientific publications",license_type:a,categories:[{id:T,title:aa,icon:ab,children:[]}],created_at:"2024-11-04T14:33:59.000000Z",updated_at:"2024-11-04T14:50:26.000000Z",typesAndCategories:[T,c]},{id:fG,title:fH,slug:fI,pinned:e,types:[{id:c,icon:c,title:g}],url:aJ,documentation_url:aK,tutorial_url:aL,short_description:fJ,license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]},{id:K,title:P,icon:F,children:[]}],created_at:fK,updated_at:fL,typesAndCategories:[f,u,K,c]},{id:dS,title:dT,slug:dU,pinned:e,types:[{id:c,icon:c,title:g}],url:dV,documentation_url:dW,tutorial_url:a,short_description:dX,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dY,updated_at:dZ,typesAndCategories:[f,c]},{id:m,title:"UniProtKB",slug:"uniprotkb",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.uniprot.org\u002F",documentation_url:iq,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fc\u002Funiprotvideos\u002Ffeatured",short_description:"Protein sequence database",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]}],created_at:Y,updated_at:"2025-01-20T12:22:48.000000Z",typesAndCategories:[f,d]},{id:665,title:"ExpressionView",slug:"expressionview",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ExpressionView",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ExpressionView#Tutorials",short_description:"Biclusters identified in gene expression data",license_type:a,categories:[{id:q,title:A,icon:l,children:[]}],created_at:"2020-07-01T18:24:34.000000Z",updated_at:"2024-08-16T13:46:19.000000Z",typesAndCategories:[q,c]},{id:649,title:"Compute pI\u002FMW",slug:"compute-pi-mw",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Fcompute_pi\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fcompute_pi\u002Fpi_tool-doc.html",tutorial_url:a,short_description:"Isoelectric point and molecular weight from protein sequence",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-07-01T09:48:37.000000Z",updated_at:"2025-02-20T14:52:54.000000Z",typesAndCategories:[f,c]},{id:cg,title:ch,slug:ci,pinned:e,types:[{id:c,icon:c,title:g}],url:cj,documentation_url:ck,tutorial_url:a,short_description:cl,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:cm,updated_at:cn,typesAndCategories:[f,c]},{id:co,title:cp,slug:cq,pinned:e,types:[{id:c,icon:c,title:g}],url:cr,documentation_url:cs,tutorial_url:a,short_description:ct,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:cu,updated_at:cv,typesAndCategories:[f,c]},{id:fp,title:fq,slug:fr,pinned:S,types:[{id:c,icon:c,title:g}],url:fs,documentation_url:ft,tutorial_url:fu,short_description:fv,license_type:{id:u,title:_,link_url:at,link_label:au,created_at:b,updated_at:av},categories:[{id:h,title:r,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:fw,updated_at:fx,typesAndCategories:[h,C,c]},{id:583,title:"QuasR",slug:"quasr",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fbioconductor.org\u002Fpackages\u002Frelease\u002Fbioc\u002Fhtml\u002FQuasR.html",documentation_url:a,tutorial_url:a,short_description:"Quantification and analysis of Short Reads",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2020-06-24T10:55:13.000000Z",updated_at:"2023-11-01T14:37:42.000000Z",typesAndCategories:[h,q,c]},{id:630,title:"Rhea",slug:"rhea",pinned:S,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.rhea-db.org\u002F",documentation_url:"https:\u002F\u002Fwww.rhea-db.org\u002Fhelp",tutorial_url:"https:\u002F\u002Fwww.rhea-db.org\u002Fhelp\u002Fsearching-rhea",short_description:"Expert-curated database of biochemical reactions",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]},{id:z,title:E,icon:p,children:[]}],created_at:"2020-06-30T16:31:34.000000Z",updated_at:"2024-11-08T08:39:50.000000Z",typesAndCategories:[f,i,z,d]},{id:572,title:"SwissADME",slug:"swissadme",pinned:e,types:[{id:c,icon:c,title:g}],url:"http:\u002F\u002Fwww.swissadme.ch\u002F",documentation_url:"http:\u002F\u002Fwww.swissadme.ch\u002Fhelp.php",tutorial_url:a,short_description:"Pharmacokinetics properties and druglikeness",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:J,title:R,icon:F,children:[]}],created_at:"2020-06-23T18:15:00.000000Z",updated_at:"2024-10-21T14:54:38.000000Z",typesAndCategories:[J,c]},{id:566,title:"SwissSidechain",slug:"swisssidechain",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swisssidechain.ch\u002F",documentation_url:"https:\u002F\u002Fwww.swisssidechain.ch\u002Fdata\u002Fhelp_file.pdf",tutorial_url:a,short_description:"Database of non-natural amino acid side chains",license_type:{id:ar,title:aO,link_url:aP,link_label:aQ,created_at:aR,updated_at:aS},categories:[{id:f,title:j,icon:k,children:[]},{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:"2020-06-22T17:17:05.000000Z",updated_at:"2024-10-21T13:53:15.000000Z",typesAndCategories:[f,J,K,d]},{id:dC,title:dD,slug:dE,pinned:e,types:[{id:c,icon:c,title:g}],url:dF,documentation_url:dG,tutorial_url:a,short_description:dH,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dI,updated_at:dJ,typesAndCategories:[f,c]},{id:719,title:"SwissLipids SPARQL endpoint",slug:"swisslipids-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fbeta.sparql.swisslipids.org\u002F",documentation_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=9S-A4gBz8Cg",tutorial_url:a,short_description:"SPARQL access to the SwissLipids knowledgebase",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:D,title:H,icon:p,children:[]}],created_at:"2022-09-16T09:38:49.000000Z",updated_at:"2024-11-11T10:43:50.000000Z",typesAndCategories:[f,D,d]},{id:743,title:"Cellstates",slug:"cellstates",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgithub.com\u002FnimwegenLab\u002Fcellstates",documentation_url:"https:\u002F\u002Fdoi.org\u002F10.1371\u002Fjournal.pcbi.1012224",tutorial_url:"https:\u002F\u002Fgithub.com\u002FnimwegenLab\u002Fcellstates\u002Fblob\u002Fmaster\u002Fnotebooks\u002Fcellstates_introduction.ipynb",short_description:"Infering clusters of cells in scRNA-seq data",license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:q,title:A,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2025-01-30T13:38:39.000000Z",updated_at:"2025-02-03T12:36:21.000000Z",typesAndCategories:[q,i,c]},{id:go,title:gp,slug:gq,pinned:e,types:[{id:c,icon:c,title:g}],url:gr,documentation_url:gs,tutorial_url:gt,short_description:gu,license_type:a,categories:[{id:K,title:P,icon:F,children:[]}],created_at:gv,updated_at:gw,typesAndCategories:[K,c]},{id:676,title:"SWISS-MODEL",slug:"swiss-model",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:aJ,documentation_url:aK,tutorial_url:aL,short_description:"Protein structure homology-modelling",license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:f,title:j,icon:k,children:[]},{id:u,title:Z,icon:F,children:[{id:O,title:X,parent_id:u,icon:a,created_at:b,updated_at:b},{id:J,title:R,parent_id:u,icon:a,created_at:b,updated_at:b},{id:K,title:P,parent_id:u,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-06T07:25:23.000000Z",updated_at:"2024-10-03T12:25:35.000000Z",typesAndCategories:[f,u,d,c]},{id:fh,title:fi,slug:fj,pinned:e,types:[{id:c,icon:c,title:g}],url:fk,documentation_url:fl,tutorial_url:a,short_description:fm,license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:h,title:r,icon:l,children:[]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fn,updated_at:fo,typesAndCategories:[h,t,c]},{id:bS,title:bT,slug:bU,pinned:S,types:[{id:c,icon:c,title:g}],url:bV,documentation_url:bW,tutorial_url:bX,short_description:bY,license_type:{id:aB,title:aC,link_url:aD,link_label:aE,created_at:an,updated_at:an},categories:[{id:h,title:r,icon:l,children:[]},{id:B,title:N,icon:I,children:[]}],created_at:bZ,updated_at:b_,typesAndCategories:[h,B,c]},{id:723,title:it,slug:"mhc-motif-atlas",pinned:e,types:[{id:d,icon:d,title:n}],url:"http:\u002F\u002Fmhcmotifatlas.org\u002Fhome",documentation_url:a,tutorial_url:a,short_description:it,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:T,title:aa,icon:ab,children:[]}],created_at:"2022-11-22T15:50:43.000000Z",updated_at:"2024-08-26T09:44:36.000000Z",typesAndCategories:[f,T,d]},{id:612,title:"Genome History",slug:"genome-history",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FGenomeHistory\u002F",documentation_url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FGenomeHistory\u002FGenomeHistory.html",tutorial_url:a,short_description:"Gene duplicate identification",license_type:a,categories:[{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T17:58:34.000000Z",updated_at:"2024-08-15T09:41:20.000000Z",typesAndCategories:[i,c]},{id:gE,title:gF,slug:gG,pinned:e,types:[{id:c,icon:c,title:g}],url:gH,documentation_url:gI,tutorial_url:gJ,short_description:gK,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:gL,updated_at:gM,typesAndCategories:[J,K,c]},{id:D,title:"OrthoDB",slug:"orthodb",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.orthodb.org\u002F",documentation_url:"https:\u002F\u002Fwww.ezlab.org\u002Forthodb_userguide.html",tutorial_url:a,short_description:"Ortholog evolutionary and functional annotations",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:Y,updated_at:"2024-10-16T11:49:55.000000Z",typesAndCategories:[t,d]},{id:fS,title:fT,slug:fU,pinned:e,types:[{id:c,icon:c,title:g}],url:fV,documentation_url:fW,tutorial_url:a,short_description:fX,license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:fY,updated_at:fZ,typesAndCategories:[m,t,c]},{id:cD,title:cE,slug:cF,pinned:e,types:[{id:c,icon:c,title:g}],url:cG,documentation_url:a,tutorial_url:a,short_description:cH,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:cI,updated_at:cJ,typesAndCategories:[f,o,c]},{id:dm,title:dn,slug:do0,pinned:e,types:[{id:d,icon:d,title:n}],url:dp,documentation_url:dq,tutorial_url:dr,short_description:ds,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dt,updated_at:du,typesAndCategories:[f,o,d]},{id:613,title:"FetchGWI \u002F tagger",slug:"fetchgwi-tagger",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fsourceforge.net\u002Fprojects\u002Ftagger\u002F",documentation_url:a,tutorial_url:a,short_description:"Short sequence mapping",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2020-06-26T18:08:10.000000Z",updated_at:"2024-08-22T15:19:17.000000Z",typesAndCategories:[h,q,c]},{id:742,title:"Pathoplexus",slug:"pathoplexus",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fpathoplexus.org\u002F",documentation_url:"https:\u002F\u002Fpathoplexus.org\u002Fdocs\u002F",tutorial_url:a,short_description:"Human viral pathogen genomic data sharing platform",license_type:a,categories:[{id:h,title:r,icon:l,children:[]}],created_at:iu,updated_at:iu,typesAndCategories:[h,d]},{id:hQ,title:hR,slug:hS,pinned:e,types:[{id:d,icon:d,title:n}],url:hT,documentation_url:hU,tutorial_url:a,short_description:hV,license_type:{id:q,title:hW,link_url:hX,link_label:hY,created_at:b,updated_at:hZ},categories:[{id:f,title:j,icon:k,children:[]}],created_at:h_,updated_at:h$,typesAndCategories:[f,d]},{id:673,title:"SwissOrthology",slug:"swissorthology",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fswissorthology.ch\u002Fservice\u002Fsearch",documentation_url:a,tutorial_url:"https:\u002F\u002Fswissorthology.ch\u002Fservice\u002Fguide",short_description:"One-stop shop for orthologs",license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-02T13:44:05.000000Z",updated_at:"2024-11-11T09:38:06.000000Z",typesAndCategories:[m,t,d,c]},{id:cw,title:cx,slug:cy,pinned:e,types:[{id:d,icon:d,title:n}],url:cz,documentation_url:a,tutorial_url:a,short_description:cA,license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:s,icon:p,children:[]}],created_at:cB,updated_at:cC,typesAndCategories:[o,d]},{id:564,title:"SwissSimilarity",slug:"swisssimilarity",pinned:e,types:[{id:c,icon:c,title:g}],url:"http:\u002F\u002Fwww.swisssimilarity.ch\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=4VV7_QgCzgs",short_description:"Ligand-based virtual screening",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:J,title:R,icon:F,children:[]}],created_at:"2020-06-22T16:58:01.000000Z",updated_at:"2024-10-21T14:39:11.000000Z",typesAndCategories:[J,c]},{id:593,title:"arrayMAP",slug:"arraymap",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fprogenetix.org\u002Fprogenetix-cohorts\u002Farraymap\u002F",documentation_url:a,tutorial_url:a,short_description:"Curated array data repository for cancer genomics",license_type:{id:G,title:ai,link_url:aj,link_label:ak,created_at:b,updated_at:al},categories:[{id:h,title:r,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-24T18:26:29.000000Z",updated_at:"2024-08-22T15:12:03.000000Z",typesAndCategories:[h,i,d,c]},{id:728,title:"cancercelllines.org",slug:"cancercelllines-org",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fcancercelllines.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Genomic variants in human cancer cell lines",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:h,title:r,icon:l,children:[]},{id:T,title:aa,icon:ab,children:[]}],created_at:"2023-05-26T08:17:32.000000Z",updated_at:"2024-05-14T07:13:30.000000Z",typesAndCategories:[m,h,T,d]},{id:632,title:"ProtScale",slug:"protscale",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Fprotscale\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fprotscale\u002Fprotscale-doc.html",tutorial_url:a,short_description:"Profile produced by amino acids scales on protein sequences",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T16:56:00.000000Z",updated_at:"2025-02-19T13:25:13.000000Z",typesAndCategories:[f,c]},{id:eU,title:eV,slug:eW,pinned:S,types:[{id:c,icon:c,title:g}],url:eX,documentation_url:a,tutorial_url:eY,short_description:eZ,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:q,title:A,icon:l,children:[]}],created_at:e_,updated_at:e$,typesAndCategories:[q,c]},{id:715,title:"Phylo.io",slug:"phylo-io",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fphylo.io\u002F",documentation_url:"http:\u002F\u002Fphylo.io\u002Fmanual.html",tutorial_url:a,short_description:"A tool for visualising and comparing phylogenetic trees",license_type:{id:O,title:_,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T13:05:40.000000Z",updated_at:"2024-10-16T14:16:48.000000Z",typesAndCategories:[t,c]},{id:571,title:"SwissBioIsostere",slug:"swissbioisostere",pinned:e,types:[{id:d,icon:d,title:n}],url:"http:\u002F\u002Fwww.swissbioisostere.ch\u002F",documentation_url:"http:\u002F\u002Fswissbioisostere.ch\u002Fhelp.html",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=0-jqgWoP6hY",short_description:"Database of molecular replacements for ligand design",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:j,icon:k,children:[]},{id:J,title:R,icon:F,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:"2020-06-23T18:10:51.000000Z",updated_at:"2024-10-22T09:27:04.000000Z",typesAndCategories:[f,J,K,d]},{id:bL,title:bM,slug:bN,pinned:e,types:[{id:c,icon:c,title:g}],url:bO,documentation_url:a,tutorial_url:a,short_description:bP,license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:f,title:j,icon:k,children:[]}],created_at:bQ,updated_at:bR,typesAndCategories:[f,c]},{id:598,title:"mOTUs",slug:"motus",pinned:S,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fwww.motus-tool.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Microbial taxonomic and population genomic profiler",license_type:{id:C,title:ad,link_url:ae,link_label:af,created_at:b,updated_at:ag},categories:[{id:G,title:U,icon:l,children:[]},{id:C,title:Q,icon:I,children:[]}],created_at:"2020-06-24T19:02:34.000000Z",updated_at:"2025-01-27T12:08:33.000000Z",typesAndCategories:[G,C,d,c]},{id:603,title:"iPtgxDBs",slug:"iptgxdbs",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fiptgxdb.expasy.org",documentation_url:a,tutorial_url:a,short_description:"Platform for integrated proteogenomics databases",license_type:a,categories:[{id:m,title:V,icon:l,children:[{id:h,title:r,parent_id:m,icon:a,created_at:b,updated_at:b},{id:G,title:U,parent_id:m,icon:a,created_at:b,updated_at:b},{id:q,title:A,parent_id:m,icon:a,created_at:b,updated_at:b}]},{id:h,title:r,icon:l,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T16:30:35.000000Z",updated_at:"2024-08-21T13:34:49.000000Z",typesAndCategories:[m,h,i,d,c]},{id:661,title:"TCS",slug:"tcs",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swissregulon.unibas.ch\u002Fcgi-bin\u002FTCS.pl",documentation_url:a,tutorial_url:a,short_description:"Predict interaction specificity in bacterial signalling",license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:i,title:L,icon:p,children:[{id:o,title:s,parent_id:i,icon:a,created_at:b,updated_at:b},{id:D,title:H,parent_id:i,icon:a,created_at:b,updated_at:M},{id:z,title:E,parent_id:i,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T11:55:00.000000Z",updated_at:"2024-11-06T16:08:24.000000Z",typesAndCategories:[f,i,d]},{id:hI,title:hJ,slug:hK,pinned:e,types:[{id:c,icon:c,title:g}],url:hL,documentation_url:hM,tutorial_url:a,short_description:hN,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:hO,updated_at:hP,typesAndCategories:[f,c]},{id:586,title:iv,slug:iv,pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fpftools3",documentation_url:a,tutorial_url:a,short_description:"Build, calibrate, and search biological sequences",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-24T11:18:41.000000Z",updated_at:"2024-07-18T07:35:49.000000Z",typesAndCategories:[f,c]},{id:df,title:dg,slug:dh,pinned:e,types:[{id:c,icon:c,title:g}],url:di,documentation_url:a,tutorial_url:a,short_description:dj,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:o,title:s,icon:p,children:[]}],created_at:dk,updated_at:dl,typesAndCategories:[f,o,c]},{id:689,title:"OrthoDB SPARQL endpoint",slug:"orthodb-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.orthodb.org\u002F",documentation_url:"https:\u002F\u002Fsparql.orthodb.org\u002Fwidoco\u002Findex-en.html",tutorial_url:a,short_description:"SPARQL access to the OrthoDB catalog of orthologs",license_type:{id:h,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:t,title:W,icon:I,children:[{id:B,title:N,parent_id:t,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-08-31T09:49:24.000000Z",updated_at:"2024-10-14T14:59:34.000000Z",typesAndCategories:[t,d]},{id:561,title:"TromER",slug:"tromer",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fepd.expasy.org\u002Ftromer\u002F",documentation_url:a,tutorial_url:a,short_description:"Prediction of transcribed regions and splice junctions",license_type:a,categories:[{id:h,title:r,icon:l,children:[]},{id:q,title:A,icon:l,children:[]}],created_at:"2020-06-22T13:22:48.000000Z",updated_at:"2024-07-31T10:09:15.000000Z",typesAndCategories:[h,q,c]},{id:636,title:"PRATT",slug:"pratt",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002Fpratt_doc.html",tutorial_url:a,short_description:"Conserved patterns in a set of protein sequences",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-30T17:24:54.000000Z",updated_at:"2025-02-11T10:52:40.000000Z",typesAndCategories:[f,c]},{id:697,title:"PolyAsite",slug:"polyasite",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fpolyasite.unibas.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"Database of curated RNA polyadenylation sites",license_type:a,categories:[{id:q,title:A,icon:l,children:[]}],created_at:"2020-11-18T12:34:41.000000Z",updated_at:"2024-09-12T09:36:56.000000Z",typesAndCategories:[q,d]},{id:587,title:"PaxDb",slug:"paxdb",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:g}],url:"https:\u002F\u002Fpax-db.org\u002F",documentation_url:"https:\u002F\u002Fpax-db.org\u002Fhelp",tutorial_url:a,short_description:"Protein abundance across several organisms",license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:"2020-06-24T11:24:07.000000Z",updated_at:"2024-11-07T13:08:46.000000Z",typesAndCategories:[f,d,c]},{id:584,title:"QMEAN",slug:"qmean",pinned:e,types:[{id:c,icon:c,title:g}],url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fqmean\u002F",documentation_url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fqmean\u002Fhelp",tutorial_url:a,short_description:"Protein model quality estimation",license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:K,title:P,icon:F,children:[]}],created_at:"2020-06-24T11:03:18.000000Z",updated_at:"2024-10-03T12:33:50.000000Z",typesAndCategories:[f,K,c]}]},search:{error:""}},serverRendered:S,routePath:"\u002Fresources\u002Fmelanie",config:{_app:{basePath:"\u002F",assetsPath:"\u002F_nuxt\u002F",cdnURL:a}}}}(null,"2020-06-10T10:24:16.000000Z","tool","db",false,5,"Software tool",2,13,"Proteins & Proteomes","protein","gene",1,"Database",14,"sys-biology",4,"Genomics","Glycomics",6,9,"a Creative Commons Attribution International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby\u002F4.0\u002F","CC BY 4.0","2022-04-14T10:32:25.000000Z",16,"Transcriptomics",7,8,15,"Metabolomics","stru-biology",3,"Lipidomics","evolution",11,12,"Systems Biology","2020-06-10T11:03:54.000000Z","Evolution biology",10,"Structural analysis","Population genetics","Medicinal chemistry",true,17,"Metagenomics","Genes & Genomes","Evolution & Phylogeny","Drug design","2020-06-18T13:59:48.000000Z","Structural Biology","the","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" rel=\"noopener noreferrer nofollow\"\u003EProteome Informatics group\u003C\u002Fa\u003E.\u003C\u002Fp\u003E","Text mining & Machine learning","text-mining",0,"the GNU General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fgpl-3.0.en.html","GPL 3","2020-07-16T10:56:27.000000Z","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002F\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E","a Creative Commons Attribution-ShareAlike International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-sa\u002F4.0\u002F","CC BY-SA 4.0","2022-04-14T10:32:09.000000Z","2020-06-18T13:59:49.000000Z","2023-03-23T09:28:20.000000Z","https:\u002F\u002Fopensource.org\u002Flicenses\u002FMIT","MIT License","2020-06-23T16:41:42.000000Z",20,"2025-01-23T12:45:44.000000Z","https:\u002F\u002Fwww.apache.org\u002Flicenses\u002FLICENSE-2.0","Apache License","2020-06-23T16:41:00.000000Z","a Creative Commons Universal license","https:\u002F\u002Fcreativecommons.org\u002Fpublicdomain\u002Fzero\u002F1.0\u002F","CC0","2022-04-14T10:32:34.000000Z","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E",25,"the GNU Affero General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fagpl-3.0.en.html","GNU AGPL","a Creative Commons Attribution-NonCommercial-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nc-nd\u002F4.0\u002F","CC BY-NC-ND 4.0","2022-04-14T10:31:12.000000Z","https:\u002F\u002Fswissmodel.expasy.org\u002F","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Fhelp","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Ftutorial","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Ferik-van-nimwegen-group\" rel=\"noopener noreferrer nofollow\"\u003EGenome Systems Biology group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E",21,"a free license for academic use. A licence is required for private companies.","http:\u002F\u002Fwww.swisstargetprediction.ch\u002Fcontact.php","Contact the team","2020-07-16T11:12:03.000000Z","2025-02-05T09:02:28.000000Z",605,"MELANIE","melanie","https:\u002F\u002F2d-gel-analysis.com","https:\u002F\u002F2d-gel-analysis.com\u002Fdocumentation\u002F","2-D PAGE analysis","2020-06-26T16:47:04.000000Z","2025-01-15T16:07:02.000000Z",2098,"Medicine",2246,"Proteomics experiment",1349,"TIFF",2105,"Workflows",2087,"Protein modifications","ViralZone","viralzone","https:\u002F\u002Fviralzone.expasy.org\u002F","https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2023_VRLZN","Fact sheets about viruses linked to sequence databases","2025-03-11T11:46:54.000000Z",597,"MSight","msight","https:\u002F\u002Fmsight.sib.swiss\u002F","Mass Spectrometry Imager","2020-06-24T18:53:32.000000Z","2025-01-15T15:43:59.000000Z",704,"GlyConnect Compozitor","glyconnect-compozitor","https:\u002F\u002Fglyconnect.expasy.org\u002Fcompozitor\u002F","Contextualises glycan composition sets","2021-01-21T18:53:58.000000Z","2023-03-27T07:18:38.000000Z",722,"SwissBioPics","swissbiopics","https:\u002F\u002Fwww.swissbiopics.org\u002F","https:\u002F\u002Fwww.npmjs.com\u002Fpackage\u002F%40swissprot\u002Fswissbiopics-visualizer","Subcellular location visualization","2022-10-04T14:50:45.000000Z","2025-02-13T12:19:00.000000Z",670,"pROC","proc","https:\u002F\u002Fweb.expasy.org\u002FpROC\u002F","Visualize, smooth and compare ROC curves","2020-07-01T18:45:50.000000Z","2024-07-18T09:12:14.000000Z",591,"Nextstrain","nextstrain","https:\u002F\u002Fnextstrain.org\u002F","https:\u002F\u002Fdocs.nextstrain.org\u002Fen\u002Flatest\u002Findex.html","https:\u002F\u002Fdocs.nextstrain.org\u002Fen\u002Flatest\u002Finstall.html","Impact of pathogen genome data on science and public health","2020-06-24T14:31:11.000000Z","2025-03-11T11:49:38.000000Z",629,"SIM","sim","https:\u002F\u002Fweb.expasy.org\u002Fsim\u002F","Alignment of two protein sequences or within a sequence","2020-06-30T16:24:17.000000Z","2025-02-19T12:53:07.000000Z",639,"PeptideCutter","peptidecutter","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_cutter\u002F","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_cutter\u002Fpeptidecutter_instructions.html","Potential cleavage sites in a protein","2020-06-30T17:51:00.000000Z","2025-02-20T11:03:40.000000Z",650,"UniProt ClustalO","uniprot-clustalo","https:\u002F\u002Fwww.uniprot.org\u002Falign\u002F","https:\u002F\u002Fwww.uniprot.org\u002Fhelp\u002Fsequence-alignments","Align two or more protein sequences","2020-07-01T09:55:02.000000Z","2025-02-20T15:58:10.000000Z",559,"UniCarb-DB","unicarb-db","https:\u002F\u002Funicarb-db.expasy.org","Glycan structures and associated mass spectrometry data","2020-06-22T12:31:58.000000Z","2023-06-02T08:17:49.000000Z",573,"Swiss Mass Abacus","swiss-mass-abacus","https:\u002F\u002Fglycoproteome.expasy.org\u002Fswiss-mass-abacus\u002F","Intuitive calculator of peptide and glycopeptide masses","2020-06-23T18:24:50.000000Z","2020-07-16T12:41:11.000000Z",574,"SugarSketcher","sugarsketcher","https:\u002F\u002Fglycoproteome.expasy.org\u002Fsugarsketcher\u002F","Fast, intuitive, SNFG-compliant glycan structure drawing","2020-06-24T09:20:48.000000Z","2020-07-16T12:21:24.000000Z",575,"SugarBind","sugarbind","https:\u002F\u002Fsugarbind.expasy.org","https:\u002F\u002Fsugarbind.expasy.org\u002Fhelp","Pathogen Sugar-Binding Database","2020-06-24T09:25:27.000000Z","2024-08-15T14:25:38.000000Z",607,"Glynsight","glynsight","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002F","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002Fabout","Visualise and compare glycan expression profiles","2020-06-26T17:15:21.000000Z","2024-08-16T13:52:43.000000Z",609,"GlycoSiteAlign","glycositealign","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycositealign\u002F","Multiple alignment of sequences around glycosylation sites","2020-06-26T17:29:46.000000Z","2020-07-16T12:22:46.000000Z",610,"GlyConnect","glyconnect","https:\u002F\u002Fglyconnect.expasy.org","https:\u002F\u002Fglyconnect.expasy.org\u002Fhelp","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=L9Zn-ji4RYY&t=2619s","Integrated data platform to study glycosylation","2020-06-26T17:50:15.000000Z","2025-03-11T11:50:54.000000Z",611,"GlycoDigest","glycodigest","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycodigest\u002F","In silico digestion of glycans by exoglycosidases","2020-06-26T17:54:21.000000Z","2020-07-16T12:08:34.000000Z",628,"Sulfinator","sulfinator","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002Fsulfinator-doc.html","Predict tyrosine sulfation sites in protein sequences","2020-06-30T16:11:29.000000Z","2025-02-19T12:34:19.000000Z",638,"PeptideMass","peptidemass","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002F","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002Fpeptide-mass-doc.html","Theoretical protein cleavage by a given enzyme","2020-06-30T17:44:47.000000Z","2025-02-19T16:06:10.000000Z",640,"Myristoylator","myristoylator","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002Fmyristoylator-doc.html","N-terminal myristoylation of proteins by neural networks","2020-06-30T17:55:49.000000Z","2025-02-20T13:58:48.000000Z",645,"GlycoMod","glycomod","https:\u002F\u002Fweb.expasy.org\u002Fglycomod\u002F","Possible oligosaccharide structures on proteins from masses","2020-06-30T18:28:43.000000Z","2023-09-28T07:24:17.000000Z",646,"FindPept","findpept","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002Ffindpept-doc.html","Unspecific protein cleavage from experimental masses","2020-06-30T18:33:26.000000Z","2025-02-19T13:55:07.000000Z",647,"FindMod","findmod","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002Ffindmod-doc.html","Potential PTMs and single amino acid substitutions","2020-07-01T09:34:57.000000Z","2025-02-19T12:47:21.000000Z",707,"Glyco@Expasy","glyco-expasy","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycomics-expasy\u002F","Zooming in on web-based glycoinformatics resources","2021-06-07T08:19:20.000000Z","2024-11-21T10:50:24.000000Z",721,"GlyConnect SPARQL endpoint","glyconnect-sparql-endpoint","https:\u002F\u002Fglyconnect.expasy.org\u002Frdf","SPARQL access to GlyConnect","2022-09-16T13:52:39.000000Z","2023-10-10T12:32:47.000000Z",741,"GlycoQL","glycoql","https:\u002F\u002Fglyconnect.expasy.org\u002Fglycoql\u002F","Match a glycan substructure to a database of full structures","VenomZone","venom-zone","https:\u002F\u002Fvenomzone.expasy.org\u002F","https:\u002F\u002Fvenomzone.expasy.org\u002F1877","Portal to venom protein UniProtKB entries","2025-02-13T15:59:26.000000Z",696,"ASAP","asap","https:\u002F\u002Fasap.epfl.ch\u002F","https:\u002F\u002Fasap.epfl.ch\u002Fhome\u002Ftutorial","Web-based, cooperative portal for single-cell data analyses","2020-11-16T15:15:41.000000Z","2024-10-14T14:15:40.000000Z",700,"SIBiLS","sibils","https:\u002F\u002Fsibils.org\u002F","Personalized information retrieval from the literature","2020-12-01T16:16:51.000000Z","2024-11-04T14:25:53.000000Z",717,"Nextclade","nextclade","https:\u002F\u002Fclades.nextstrain.org\u002F","https:\u002F\u002Fdocs.nextstrain.org\u002Fprojects\u002Fnextclade\u002Fen\u002Fstable\u002F","Clade assignment, mutation calling & QC for virus sequences","2022-03-31T07:39:29.000000Z","2024-10-18T13:45:48.000000Z",556,"V-pipe","v-pipe","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002F","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F#tutorials","Viral genomics pipeline","2020-06-22T10:05:02.000000Z","2024-09-25T07:35:28.000000Z",702,"raxmlGUI","raxmlgui","https:\u002F\u002Fantonellilab.github.io\u002FraxmlGUI\u002F","http:\u002F\u002Fdx.doi.org\u002F10.1111\u002F2041-210X.13512","raxmlGUI 2.0 is a graphical user interface to RAxML","2021-01-14T09:44:30.000000Z","2024-08-22T15:36:58.000000Z",660,"SWISS-MODEL Workspace","swiss-model-workspace","Fully automated protein structure homology-modeling server","2020-07-01T11:43:42.000000Z","2024-09-26T12:59:32.000000Z","HAMAP","hamap","https:\u002F\u002Fhamap.expasy.org\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fhamap_doc.html","UniProtKB family classification and annotation","2025-03-11T11:45:17.000000Z",580,"REALPHY","realphy","https:\u002F\u002Frealphy.unibas.ch\u002Frealphy\u002F","https:\u002F\u002Frealphy.unibas.ch\u002Fdocs\u002FRealphy_manual.pdf","Inference of phylogenetic trees from genome data","2020-06-24T10:35:26.000000Z","2024-10-24T13:49:57.000000Z",683,"V-pipe SARS-CoV-2","v-pipe-sars-cov-2","https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fsars-cov-2\u002F","https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002FREADME.md","https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002Fdocs\u002Ftutorial_sarscov2.md","V-pipe pipeline for SARS-CoV-2 sequencing data","2020-07-14T08:10:17.000000Z","2024-09-13T11:27:52.000000Z",579,"ShoRAH","shorah","http:\u002F\u002Fcbg-ethz.github.io\u002Fshorah\u002F","Analysis of NGS data","2020-06-24T10:18:17.000000Z","2024-09-13T11:51:18.000000Z",589,"OpenStructure","openstructure","https:\u002F\u002Fopenstructure.org\u002F","https:\u002F\u002Fopenstructure.org\u002Fdocs\u002F","https:\u002F\u002Fopenstructure.org\u002Fdocs\u002Fintro\u002F","Molecular modelling and visualisation environment","2020-06-24T13:01:10.000000Z","2024-10-03T12:32:48.000000Z",690,"LEMMI","lemmi","https:\u002F\u002Fwww.ezlab.org\u002Flemmi.html","Continuous benchmarking of methods for metagenomics","2020-08-31T09:54:20.000000Z","2024-10-16T08:44:34.000000Z",570,"SwissParam","swissparam","http:\u002F\u002Fwww.swissparam.ch\u002F","http:\u002F\u002Fwww.swissparam.ch\u002FFAQ.php","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=yrf8HzFIpfk","Topology and parameters for small molecules","2020-06-23T18:05:23.000000Z","2024-10-22T09:41:25.000000Z",725,"CAMEO","cameo","https:\u002F\u002Fwww.cameo3d.org\u002F","https:\u002F\u002Fwww.cameo3d.org\u002Fcameong_help\u002F","Weekly automated benchmarking of protein structure modelling","2023-02-13T09:14:06.000000Z","2024-10-24T09:02:46.000000Z",666,"ISMARA","ismara","https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F","https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_ISMARA","Webservice for gene expression and epigenetic data analysis","special","https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F#terms","Terms of Use","2020-07-02T11:48:19.000000Z","2020-07-01T18:29:43.000000Z","2025-03-11T11:52:59.000000Z",729,"CREMA","crema","https:\u002F\u002Fcrema.unibas.ch","Cis-Regulatory Element Motif Activities","2023-07-31T07:37:49.000000Z","2024-11-11T09:40:58.000000Z",657,"CRUNCH","crunch","https:\u002F\u002Fcrunch.unibas.ch","Automated pipeline for ChIP-seq data analysis","2020-07-01T11:14:03.000000Z","2024-11-11T09:39:06.000000Z",669,"Phylogibbs","phylogibbs","https:\u002F\u002Fwww.phylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl","https:\u002F\u002Fphylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl?part=documentation&page=phylogibbs","Regulatory sites in a collection of DNA sequences","2020-07-01T18:43:30.000000Z","2024-10-24T14:12:47.000000Z",730,"DWT-online","dwt-online","https:\u002F\u002Fdwt.scicore.unibas.ch","Dinucleotide Weight Tensor toolbox and visualisation service","2023-10-03T12:10:48.000000Z","2024-11-06T14:59:52.000000Z",644,"HAMAP-Scan","hamap-scan","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002Fhamap_scan_userman.html","Scanning of protein sequences against HAMAP families","2020-06-30T18:14:20.000000Z","2025-02-12T15:20:51.000000Z",691,"HAMAP SPARQL endpoint","hamap-sparql-endpoint","https:\u002F\u002Fhamap.expasy.org\u002Fsparql","https:\u002F\u002Facademic.oup.com\u002Fgigascience\u002Farticle\u002F9\u002F2\u002Fgiaa003\u002F5731417","SPARQL access to the HAMAP annotation rules","a Creative Commons Attribution-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nd\u002F4.0\u002F","CC BY-ND 4.0","2022-04-14T10:31:45.000000Z","2020-10-27T11:03:40.000000Z","2025-02-12T16:05:13.000000Z",642,"MALDIPepQuant","maldipepquant","https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002F","https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002Fhelp\u002F","Quantify MALDI peptides from Phenyx output","2020-06-30T18:01:54.000000Z","2025-02-20T14:15:38.000000Z","2025-01-09T15:16:33.000000Z","https:\u002F\u002Fprosite.expasy.org\u002Fprosite_license.html","PROSITE license","2020-07-16T11:36:48.000000Z","2022-04-14T10:30:04.000000Z","fastsimcoal","2024-03-01T14:11:56.000000Z","rawrr","https:\u002F\u002Fwww.uniprot.org\u002Fhelp","https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorials","https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fhelp","MHC Motif Atlas","2025-01-30T13:15:05.000000Z","pftools"));</script><script src="/_nuxt/ab75555.js" defer></script><script src="/_nuxt/40c1276.js" defer></script><script src="/_nuxt/7a4419e.js" defer></script><script src="/_nuxt/f177c5f.js" defer></script><script src="/_nuxt/ec37a27.js" defer></script> </body> </html>