Bio-Formats Downloads | Open Microscopy Environment (OME)

<!doctype html> <html class="no-js" lang="en" dir="ltr"> <head>  <script async src="https://www.googletagmanager.com/gtag/js?id=UA-49953125-6"></script> <script> window.dataLayer = window.dataLayer || []; function gtag(){dataLayer.push(arguments);} gtag('js', new Date()); gtag('config', 'UA-49953125-6'); </script> <meta charset="utf-8" /> <meta http-equiv="x-ua-compatible" content="ie=edge" /> <meta name="viewport" content="width=device-width, initial-scale=1.0" /> <meta name="description" content="Download the latest version of Bio-Formats here." /> <meta property="og:image" content="/img/logos/ome-logo_fb.png" /> <meta property="og:type" content="website" /> <meta property="og:url" content="" /> <meta property="og:title" content="The Open Microscopy Environment" /> <meta property="og:description" content="A consortium of universities, research labs, industry and developers producing open-source software and format standards for microscopy data." /> <meta name="twitter:card" content="summary"> <meta name="twitter:title" content="The Open Microscopy Environment"> <meta name="twitter:image" content="https://www.openmicroscopy.org/img/logos/ome-logomark_twitter.png"> <title>Bio-Formats Downloads | Open Microscopy Environment (OME)</title>  <link rel="apple-touch-icon" sizes="180x180" href="/apple-touch-icon.png?v=2"> <link rel="icon" type="image/png" sizes="32x32" href="/favicon-32x32.png?v=2"> <link rel="icon" type="image/png" sizes="16x16" href="/favicon-16x16.png?v=2"> <link rel="manifest" href="/site.webmanifest?v=2"> <link rel="mask-icon" href="/safari-pinned-tab.svg?v=2" color="#5bbad5"> <link rel="shortcut icon" href="/favicon.ico?v=2"> <meta name="msapplication-TileColor" content="#2b5797"> <meta name="theme-color" content="#ffffff">  <link rel="me" href="https://fosstodon.org/@ome"/> <link rel="stylesheet" type="text/css" media="all" href="https://fonts.googleapis.com/css?family=Open+Sans:400,600,700,400italic,600italic,700italic"> <link rel="stylesheet" type="text/css" media="all" href="https://fonts.googleapis.com/css?family=Montserrat:400,500"> <link rel="stylesheet" type="text/css" media="all" href="/css/font-awesome.min.css"> <link rel="stylesheet" type="text/css" media="all" href="/css/foundation.min.css"> <link rel="stylesheet" type="text/css" media="all" href="/css/responsive-tables.css"> <link rel="stylesheet" type="text/css" media="all" href="/css/openmicroscopy.css"> </head> <body> <div class="title-bar" data-responsive-toggle="main-menu" data-hide-for="medium"> <button class="menu-icon" type="button" data-toggle></button> <div class="title-bar-title"></div> </div>  <div class="main-nav-bar top-bar" id="main-menu"> <div class="top-bar-left"> <ul class="vertical medium-horizontal dropdown menu" data-responsive-menu="accordion medium-dropdown"> <li class="hide-for-small-only"><a class="logo" href="/index.html"><img src="/img/logos/ome-main-nav.svg" alt="OME logo" /></a></li> <li class="show-for-small-only"><a href="/index.html"><img src="/img/logos/ome-logomark.svg" alt="OME logo" style="height:32px; 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margin-left: 10px;">Explore</a></li> <li class="show-for-small-only"><a href="/explore/">Explore</a></li> </ul> </div> </div>  <a name="top-of-page"></a> <div class="callout large primary" id="bg-image-bio-formats"> <div class="row column text-center"> <h1>Bio-Formats 8.0.1 Downloads</h1> <a href="/2024/11/14/bio-formats-8-0-1.html" class="large btn-red button sites-button" style="text-shadow: none;">Read the Release Announcement</a> <a href="https://bio-formats.readthedocs.io/en/v8.0.1/" target="_blank" class="hero-link">Read the Docs</a> </div> </div>  <hr class="whitespace"> <div class="row"> <h3 class="text-center">Tools</h3> <hr> <div class="small-12 medium-3 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_bio-formats.svg"> <h5>Bio-Formats Package</h5> <h6>bioformats_package.jar</h6> <p class="card-caption">The complete bundle for end users containing everything needed to read images into ImageJ. Instructions for installing Bio-Formats in ImageJ are available in the <a href="https://bio-formats.readthedocs.io/en/v8.0.1/users/imagej/installing.html" target="_blank">user guide</a>.</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bioformats_package.jar" class="button hollow small"><i class="fa fa-download"></i> Download (31.64 MB)</a> </div> </div> </div> <div class="small-12 medium-3 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_command-line.svg"> <h5>Command Line Tools</h5> <h6>bftools.zip</h6> <p class="card-caption">A bundle of scripts for using Bio-Formats on the command line with bioformats_package.jar already included. For more info, see the <a href="https://bio-formats.readthedocs.io/en/v8.0.1/users/comlinetools/index.html" target="_blank">command line tools documentation</a>.</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bftools.zip" class="button hollow small"><i class="fa fa-download"></i> Download (29.96 MB)</a> </div> </div> </div> <div class="small-12 medium-3 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_matlab.svg"> <h5>MATLAB Toolbox</h5> <h6>bfmatlab.zip</h6> <p class="card-caption">A bundle of functions for using Bio-Formats from MATLAB with bioformats_package.jar already included. For more info, see the <a href="https://bio-formats.readthedocs.io/en/v8.0.1/users/matlab/index.html" target="_blank">MATLAB documentation</a>.</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bfmatlab.zip" class="button hollow small"><i class="fa fa-download"></i> Download (29.97 MB)</a> </div> </div> </div> <div class="small-12 medium-3 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_octave.svg"> <h5>Octave Package</h5> <h6>bioformats-octave-8.0.1.tar.gz</h6> <p class="card-caption">A bundle of functions for using Bio-Formats from Octave. You鈥檒l need to install bioformats_package.jar separately. For more info, see the <a href="https://bio-formats.readthedocs.io/en/v8.0.1/users/octave/index.html" target="_blank">Octave documentation</a>.</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bioformats-octave-8.0.1.tar.gz" class="button hollow small"><i class="fa fa-download"></i> Download (37.44 KB)</a> </div> </div> </div> </div> <hr class="invisible"> <div class="row"> <div class="medium-4 text-center column"><h3>API</h3><hr></div> <div class="medium-8 text-center column"><h3>Code</h3><hr></div> </div> <div class="row"> <div class="small-12 medium-4 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_public-api.svg"> <h5>API Documentation</h5> <h6>bio-formats-javadocs-8.0.1.zip</h6> <p class="card-caption">The Javadoc bundle containing the Bio-Formats API documentation is <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/api">here</a>.</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bio-formats-javadocs-8.0.1.zip" class="button hollow small"><i class="fa fa-download"></i> Download (14.7 MB)</a> </div> </div> </div> <div class="small-12 medium-4 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_scripts.svg"> <h5>Source Code</h5> <h6>bioformats-8.0.1.tar.xz</h6> <p></p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bioformats-8.0.1.tar.xz" class="button hollow small"><i class="fa fa-download"></i> Download (9.14 MB)</a> <a href="https://github.com/openmicroscopy/bioformats" target="_blank" class="button hollow small"><i class="fa fa-github"></i> View GitHub Repository</a> </div> </div> </div> <div class="small-12 medium-4 columns"> <div class="card card-download"> <div class="card-section"> <img class="thumbnail omero-feature" alt="OMERO feature" src="/img/icons/omero-features-icons_scripts.svg"> <h5>Source Code</h5> <h6>bioformats-8.0.1.zip</h6> <p></p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/bioformats-8.0.1.zip" class="button hollow small"><i class="fa fa-download"></i> Download (12.67 MB)</a><br> <a href="https://github.com/openmicroscopy/bioformats/tree/v8.0.1" target="_blank" class="button hollow small"><i class="fa fa-github"></i> View Git Tag</a> </div> </div> </div> </div>  <hr class="invisible">  <div class="text-center"> <a id="back-to-top" href="#top-of-page"><i class="fa fa-arrow-up"></i> back to top</a> </div>   <hr class="whitespace"> <header class="marketing-hero" style="background-image: url('/img/bg/bio-formats.jpg');"> <div class="row"> <div class="small-12 columns bg-image-text-container-cta text-center"> <p class="hero-subheader">All components available for this version of Bio-Formats are available here:</p> <a href="https://downloads.openmicroscopy.org/bio-formats/8.0.1/artifacts/?C=M;O=D" class="large btn-red button sites-button hide-for-small-only" style="text-shadow: none;">Download Components</a> <p class="hero-subheader">Previous versions are available via the <a href="https://downloads.openmicroscopy.org/bio-formats/">downloads index</a></p> </div> </div> </header>  <div id="footer" class="callout large secondary"> <div class="row"> <div class="small-12 medium-4 columns"> <div class="medium-4"><a href="/index.html"><img class="footer-logo" src="/img/logos/ome-main-nav.svg" alt="OME logo" /></a></div> <p>© 2005-2024 University of Dundee & Open Microscopy Environment. <a href="https://creativecommons.org/licenses/by/4.0/" target="_blank">Creative Commons Attribution 4.0 International License</a></p> <p>OME source code is available under the <a href="https://www.gnu.org/copyleft/gpl.html">GNU General public license</a> or more permissive open source licenses, or 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Bio-Formats Downloads | Open Microscopy Environment (OME)