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DBGET Search
<!DOCTYPE html> <html lang="en"> <head> <meta charset="utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1"> <title>DBGET Search</title> <link rel="stylesheet" href="/css/kegg25.css"> </head> <body> <div id="header"> <table style="width:680px;"> <tr> <td style="width:180px; text-align:center;"> <a href="https://www.genome.jp/"><img src="/Fig/gntop2.gif" alt="GenomeNet icon"></a> </td> <td> <h2 class="txt2">DBGET Search</h2> </td> </tr> </table> </div> <div id="content"> <br> <table style="width:680px; border:2px solid #d4e4f0; border-collapse:collapse;"> <tr><td class="bar2"> <table style="width:660px;"> <tr> <th><span class="current">DBGET</span></th> <th><a href="/dbget/linkdb.html">LinkDB</a></th> <th><a href="/kegg/kegg2.html">KEGG2</a></th> </tr> </table> </td></tr> <tr><td> <!-- start --> <br> <div style="width:640px; margin-left:20px;"> <b>DBGET</b> is an integrated database retrieval system for major biological databases at <a href="https://www.genome.jp/">GenomeNet</a>. It is also used in KEGG as the backbone retrieval system. DBGET is based on a flat-file view of molecular biology databases, where the database is considered as a collection of entries. Thus, each entry of each database can be retrieved by the combination of the database name and the entry name (see the <a href="https://www.kanehisa.jp/en/about_dbget.html">history of development</a>). <blockquote> <a href="https://www.genome.jp/dbget/">DBGET at GenomeNet</a> </blockquote> <hr class="frame2"> <h4 class="txt2">KEGG Databases in DBGET</h4> <div class="frame2"> <table style="border:1px solid; padding:2px;"> <tr> <th colspan="3">Database name</th> <th>Abbre-<br>viation</th> <th>Content</th> <th>Webpage</th> </tr> <tr> <th rowspan="21"><a href="/dbget-bin/www_bfind?kegg">kegg</a></th> <th colspan="2"><a href="/dbget-bin/www_bfind?pathway">pathway</a></th> <td class="center">path</td> <td>KEGG pathway maps</td> <td><a href="/kegg/pathway.html">KEGG PATHWAY</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?brite">brite</a></th> <td class="center">br</td> <td>Brite functional hierarchies</td> <td><a href="/kegg/brite.html">KEGG BRITE</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?module">module</a></th> <td class="center">md</td> <td>KEGG modules</td> <td><a href="/kegg/module.html">KEGG MODULE</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?orthology">orthology</a></th> <td class="center">ko</td> <td>KO groups of functional orthologs</td> <td class="nowrap"><a href="/kegg/ko.html">KEGG ORTHOLOGY</a></td> </tr> <tr> <th rowspan="4"><a href="/dbget-bin/www_bfind?genes">genes</a></th> <td class="center"><a href="/kegg/catalog/org_list.html">Organisms</a></td> <td class="center">org<br>code</td> <td>Genes in KEGG organisms</td> <td rowspan="4"><a href="/kegg/genes.html">KEGG GENES</a></td> </tr> <tr> <td class="center"><a href="/dbget-bin/www_bfind?Viruses">Viruses</a></td> <td class="center">vg</td> <td>Genes in viruses category</td> </tr> <tr> <td class="center"><a href="/dbget-bin/www_bfind?Vpept">Vpept</a></td> <td class="center">vp</td> <td>Mature peptides in viruses</td> </tr> <tr> <td class="center"><a href="/dbget-bin/www_bfind?Addendum">Addendum</a></td> <td class="center">ag</td> <td>Genes in addendum category</td> </tr> <tr> <th rowspan="2"><a href="/dbget-bin/www_bfind?genomes">genomes</a></th> <th><a href="/dbget-bin/www_bfind?genome">genome</a></th> <td class="center">gn</td> <td>KEGG organisms and selected viruses</td> <td><a href="/kegg/genome/">KEGG Organism</a></td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?mgenome">mgenome</a></th> <td class="center">mgnm</td> <td>Metagenomes</td> <td rowspan="2"><a href="/kegg/catalog/org_list3.html">KEGG Metagenomes</a></td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?mgenes">mgenes</a></th> <td class="center"> </td> <td class="center"> </td> <td>Gene catalogs in metagenomes</td> </tr> <tr> <th rowspan="5"><a href="/dbget-bin/www_bfind?ligand">ligand</a></th> <th><a href="/dbget-bin/www_bfind?compound">compound</a></th> <td class="center">cpd</td> <td>Chemical compounds</td> <td><a href="/kegg/compound/">KEGG COMPOUND</a></td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?glycan">glycan</a></th> <td class="center">gl</td> <td>Glycans</td> <td><a href="/kegg/glycan/">KEGG GLYCAN</a></td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?reaction">reaction</a></th> <td class="center">rn</td> <td>Chemical Reactions</td> <td rowspan="2"><a href="/kegg/reaction/">KEGG REACTION</a></td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?rclass">rclass</a></th> <td class="center">rc</td> <td>Reaction class</td> </tr> <tr> <th><a href="/dbget-bin/www_bfind?enzyme">enzyme</a></th> <td class="center">ec</td> <td>Enzyme nomenclature</td> <td><a href="/kegg/annotation/enzyme.html">KEGG Enzyme</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?network">network</a></th> <td class="center">ne</td> <td>Network elements</td> <td rowspan="2"><a href="/kegg/network.html">KEGG NETWORK</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?variant">variant</a></th> <td class="center">hsa_var</td> <td>Human gene variants</td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?disease">disease</a></th> <td class="center">ds</td> <td>Human diseases</td> <td><a href="/kegg/disease/">KEGG DISEASE</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?drug">drug</a></th> <td class="center">dr</td> <td>Drugs</td> <td rowspan="2"><a href="/kegg/drug/">KEGG DRUG</a></td> </tr> <tr> <th colspan="2"><a href="/dbget-bin/www_bfind?dgroup">dgroup</a></th> <td class="center">dg</td> <td>Drug groups</td> </tr> </table> </div> <br> <span class="small">mgenome and megenes are served by GenomeNet</span> <br><br> <i>Last updated: May 21, 2021</i> </div> <!-- end --> </td></tr> <tr><td class="bar2"> <table style="width:660px;"> <tr> <th><a href="https://www.kegg.jp/">KEGG</a></th> <th><a href="https://www.genome.jp/">GenomeNet</a></th> </tr> </table> </td></tr> </table> </div> </body> </html>