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Available in 21 languages" > <label id="p-lang-btn-label" for="p-lang-btn-checkbox" class="vector-dropdown-label cdx-button cdx-button--fake-button cdx-button--fake-button--enabled cdx-button--weight-quiet cdx-button--action-progressive mw-portlet-lang-heading-21" aria-hidden="true" ><span class="vector-icon mw-ui-icon-language-progressive mw-ui-icon-wikimedia-language-progressive"></span> <span class="vector-dropdown-label-text">21 languages</span> </label> <div class="vector-dropdown-content"> <div class="vector-menu-content"> <ul class="vector-menu-content-list"> <li class="interlanguage-link interwiki-ar mw-list-item"><a href="https://ar.wikipedia.org/wiki/%D8%AC%D9%85%D9%88%D9%84" title="جمول – Arabic" lang="ar" hreflang="ar" data-title="جمول" data-language-autonym="العربية" data-language-local-name="Arabic" class="interlanguage-link-target"><span>العربية</span></a></li><li class="interlanguage-link interwiki-ca mw-list-item"><a href="https://ca.wikipedia.org/wiki/Jmol" title="Jmol – Catalan" lang="ca" hreflang="ca" data-title="Jmol" data-language-autonym="Català" data-language-local-name="Catalan" class="interlanguage-link-target"><span>Català</span></a></li><li class="interlanguage-link interwiki-de mw-list-item"><a href="https://de.wikipedia.org/wiki/Jmol" title="Jmol – German" lang="de" hreflang="de" data-title="Jmol" data-language-autonym="Deutsch" data-language-local-name="German" class="interlanguage-link-target"><span>Deutsch</span></a></li><li class="interlanguage-link interwiki-el mw-list-item"><a href="https://el.wikipedia.org/wiki/Jmol" title="Jmol – Greek" lang="el" hreflang="el" data-title="Jmol" data-language-autonym="Ελληνικά" data-language-local-name="Greek" class="interlanguage-link-target"><span>Ελληνικά</span></a></li><li class="interlanguage-link interwiki-es mw-list-item"><a href="https://es.wikipedia.org/wiki/Jmol" title="Jmol – Spanish" lang="es" hreflang="es" data-title="Jmol" data-language-autonym="Español" data-language-local-name="Spanish" class="interlanguage-link-target"><span>Español</span></a></li><li class="interlanguage-link interwiki-fa mw-list-item"><a href="https://fa.wikipedia.org/wiki/%D8%AC%DB%8C%E2%80%8C%D9%85%D9%88%D9%84" title="جی‌مول – Persian" lang="fa" hreflang="fa" data-title="جی‌مول" data-language-autonym="فارسی" data-language-local-name="Persian" class="interlanguage-link-target"><span>فارسی</span></a></li><li class="interlanguage-link interwiki-fr mw-list-item"><a href="https://fr.wikipedia.org/wiki/Jmol" title="Jmol – French" lang="fr" hreflang="fr" data-title="Jmol" data-language-autonym="Français" data-language-local-name="French" class="interlanguage-link-target"><span>Français</span></a></li><li class="interlanguage-link interwiki-gl mw-list-item"><a href="https://gl.wikipedia.org/wiki/Jmol" title="Jmol – Galician" lang="gl" hreflang="gl" data-title="Jmol" data-language-autonym="Galego" data-language-local-name="Galician" class="interlanguage-link-target"><span>Galego</span></a></li><li class="interlanguage-link interwiki-ko mw-list-item"><a href="https://ko.wikipedia.org/wiki/Jmol" title="Jmol – Korean" lang="ko" hreflang="ko" data-title="Jmol" data-language-autonym="한국어" data-language-local-name="Korean" class="interlanguage-link-target"><span>한국어</span></a></li><li class="interlanguage-link interwiki-id mw-list-item"><a href="https://id.wikipedia.org/wiki/Jmol" title="Jmol – Indonesian" lang="id" hreflang="id" data-title="Jmol" data-language-autonym="Bahasa Indonesia" data-language-local-name="Indonesian" class="interlanguage-link-target"><span>Bahasa Indonesia</span></a></li><li class="interlanguage-link interwiki-it mw-list-item"><a href="https://it.wikipedia.org/wiki/Jmol" title="Jmol – Italian" lang="it" hreflang="it" data-title="Jmol" data-language-autonym="Italiano" data-language-local-name="Italian" class="interlanguage-link-target"><span>Italiano</span></a></li><li class="interlanguage-link interwiki-mk mw-list-item"><a href="https://mk.wikipedia.org/wiki/Jmol" title="Jmol – Macedonian" lang="mk" hreflang="mk" data-title="Jmol" data-language-autonym="Македонски" data-language-local-name="Macedonian" class="interlanguage-link-target"><span>Македонски</span></a></li><li class="interlanguage-link interwiki-ms mw-list-item"><a href="https://ms.wikipedia.org/wiki/Jmol" title="Jmol – Malay" lang="ms" hreflang="ms" data-title="Jmol" data-language-autonym="Bahasa Melayu" data-language-local-name="Malay" class="interlanguage-link-target"><span>Bahasa Melayu</span></a></li><li class="interlanguage-link interwiki-ja mw-list-item"><a href="https://ja.wikipedia.org/wiki/Jmol" title="Jmol – Japanese" lang="ja" hreflang="ja" data-title="Jmol" data-language-autonym="日本語" data-language-local-name="Japanese" class="interlanguage-link-target"><span>日本語</span></a></li><li class="interlanguage-link interwiki-pt mw-list-item"><a href="https://pt.wikipedia.org/wiki/Jmol" title="Jmol – Portuguese" lang="pt" hreflang="pt" data-title="Jmol" data-language-autonym="Português" data-language-local-name="Portuguese" class="interlanguage-link-target"><span>Português</span></a></li><li class="interlanguage-link interwiki-ru mw-list-item"><a href="https://ru.wikipedia.org/wiki/Jmol" title="Jmol – Russian" lang="ru" hreflang="ru" data-title="Jmol" data-language-autonym="Русский" data-language-local-name="Russian" class="interlanguage-link-target"><span>Русский</span></a></li><li class="interlanguage-link interwiki-sk mw-list-item"><a href="https://sk.wikipedia.org/wiki/Jmol" title="Jmol – Slovak" lang="sk" hreflang="sk" data-title="Jmol" data-language-autonym="Slovenčina" data-language-local-name="Slovak" class="interlanguage-link-target"><span>Slovenčina</span></a></li><li class="interlanguage-link interwiki-sl mw-list-item"><a href="https://sl.wikipedia.org/wiki/Jmol" title="Jmol – Slovenian" lang="sl" hreflang="sl" data-title="Jmol" data-language-autonym="Slovenščina" data-language-local-name="Slovenian" class="interlanguage-link-target"><span>Slovenščina</span></a></li><li class="interlanguage-link interwiki-sr mw-list-item"><a href="https://sr.wikipedia.org/wiki/Jmol" title="Jmol – Serbian" lang="sr" hreflang="sr" data-title="Jmol" data-language-autonym="Српски / srpski" data-language-local-name="Serbian" class="interlanguage-link-target"><span>Српски / srpski</span></a></li><li class="interlanguage-link interwiki-sh mw-list-item"><a href="https://sh.wikipedia.org/wiki/Jmol" title="Jmol – Serbo-Croatian" lang="sh" hreflang="sh" data-title="Jmol" data-language-autonym="Srpskohrvatski / српскохрватски" data-language-local-name="Serbo-Croatian" class="interlanguage-link-target"><span>Srpskohrvatski / српскохрватски</span></a></li><li class="interlanguage-link interwiki-tr mw-list-item"><a href="https://tr.wikipedia.org/wiki/Jmol" title="Jmol – Turkish" lang="tr" hreflang="tr" data-title="Jmol" data-language-autonym="Türkçe" 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href="/w/index.php?title=JSmol&redirect=no" class="mw-redirect" title="JSmol">JSmol</a>)</span></div></div> <div id="mw-content-text" class="mw-body-content"><div class="mw-content-ltr mw-parser-output" lang="en" dir="ltr"><div class="shortdescription nomobile noexcerpt noprint searchaux" style="display:none">Open-source Java viewer for 3D chemical structures</div> <style data-mw-deduplicate="TemplateStyles:r1236090951">.mw-parser-output .hatnote{font-style:italic}.mw-parser-output div.hatnote{padding-left:1.6em;margin-bottom:0.5em}.mw-parser-output .hatnote i{font-style:normal}.mw-parser-output .hatnote+link+.hatnote{margin-top:-0.5em}@media print{body.ns-0 .mw-parser-output .hatnote{display:none!important}}</style><div role="note" class="hatnote navigation-not-searchable">For the legal procedure, see <a href="/wiki/Judgment_as_a_matter_of_law" title="Judgment as a matter of law">Judgment as a matter of law</a>.</div> <style data-mw-deduplicate="TemplateStyles:r1257001546">.mw-parser-output .infobox-subbox{padding:0;border:none;margin:-3px;width:auto;min-width:100%;font-size:100%;clear:none;float:none;background-color:transparent}.mw-parser-output .infobox-3cols-child{margin:auto}.mw-parser-output .infobox .navbar{font-size:100%}@media screen{html.skin-theme-clientpref-night .mw-parser-output .infobox-full-data:not(.notheme)>div:not(.notheme)[style]{background:#1f1f23!important;color:#f8f9fa}}@media screen and (prefers-color-scheme:dark){html.skin-theme-clientpref-os .mw-parser-output .infobox-full-data:not(.notheme) div:not(.notheme){background:#1f1f23!important;color:#f8f9fa}}@media(min-width:640px){body.skin--responsive .mw-parser-output .infobox-table{display:table!important}body.skin--responsive .mw-parser-output .infobox-table>caption{display:table-caption!important}body.skin--responsive .mw-parser-output .infobox-table>tbody{display:table-row-group}body.skin--responsive .mw-parser-output .infobox-table tr{display:table-row!important}body.skin--responsive .mw-parser-output .infobox-table th,body.skin--responsive .mw-parser-output .infobox-table td{padding-left:inherit;padding-right:inherit}}</style><table class="infobox vevent"><caption class="infobox-title summary">Jmol</caption><tbody><tr><td colspan="2" class="infobox-image logo"><span class="mw-default-size" typeof="mw:File/Frameless"><a href="/wiki/File:J(S)mol_logo_2013.svg" class="mw-file-description"><img src="//upload.wikimedia.org/wikipedia/commons/thumb/8/85/J%28S%29mol_logo_2013.svg/120px-J%28S%29mol_logo_2013.svg.png" decoding="async" width="120" height="83" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/8/85/J%28S%29mol_logo_2013.svg/180px-J%28S%29mol_logo_2013.svg.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/8/85/J%28S%29mol_logo_2013.svg/240px-J%28S%29mol_logo_2013.svg.png 2x" data-file-width="306" data-file-height="211" /></a></span></td></tr><tr><td colspan="2" class="infobox-image logo"><span class="mw-default-size" typeof="mw:File/Frameless"><a href="/wiki/File:Jmol_screenshot_streptavidin.png" class="mw-file-description"><img src="//upload.wikimedia.org/wikipedia/commons/thumb/c/c2/Jmol_screenshot_streptavidin.png/220px-Jmol_screenshot_streptavidin.png" decoding="async" width="220" height="220" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/c/c2/Jmol_screenshot_streptavidin.png/330px-Jmol_screenshot_streptavidin.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/c/c2/Jmol_screenshot_streptavidin.png/440px-Jmol_screenshot_streptavidin.png 2x" data-file-width="465" data-file-height="465" /></a></span><div class="infobox-caption">Jmol three-dimensional structure rendering of <a href="/wiki/Streptavidin" title="Streptavidin">streptavidin</a></div></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Programmer" title="Programmer">Developer(s)</a></th><td class="infobox-data">Jmol development team</td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;">Initial release</th><td class="infobox-data">2001<span class="noprint">; 23 years ago</span><span style="display:none"> (<span class="bday dtstart published updated">2001</span>)</span></td></tr><tr style="display: none;"><td colspan="2" class="infobox-full-data"><link rel="mw-deduplicated-inline-style" href="mw-data:TemplateStyles:r1257001546"></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Software_release_life_cycle" title="Software release life cycle">Stable release</a></th><td class="infobox-data"><div style="margin:0px;">16.1.59 <span class="mw-valign-text-top" typeof="mw:File/Frameless"><a href="https://www.wikidata.org/wiki/Q1689854?uselang=en#P348" title="Edit this on Wikidata"><img alt="Edit this on Wikidata" src="//upload.wikimedia.org/wikipedia/en/thumb/8/8a/OOjs_UI_icon_edit-ltr-progressive.svg/10px-OOjs_UI_icon_edit-ltr-progressive.svg.png" decoding="async" width="10" height="10" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/en/thumb/8/8a/OOjs_UI_icon_edit-ltr-progressive.svg/15px-OOjs_UI_icon_edit-ltr-progressive.svg.png 1.5x, //upload.wikimedia.org/wikipedia/en/thumb/8/8a/OOjs_UI_icon_edit-ltr-progressive.svg/20px-OOjs_UI_icon_edit-ltr-progressive.svg.png 2x" data-file-width="20" data-file-height="20" /></a></span> / 26 February 2024<span class="noprint">; 8 months ago</span><span style="display:none"> (<span class="bday dtstart published updated">26 February 2024</span>)</span></div></td></tr><tr style="display:none"><td colspan="2"> </td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Repository_(version_control)" title="Repository (version control)">Repository</a></th><td class="infobox-data"><span class="url"><a rel="nofollow" class="external text" href="http://sourceforge.net/projects/jmol">sourceforge<wbr />.net<wbr />/projects<wbr />/jmol</a></span></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;">Written in</th><td class="infobox-data"><a href="/wiki/Java_(programming_language)" title="Java (programming language)">Java</a></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Operating_system" title="Operating system">Operating system</a></th><td class="infobox-data"><a href="/wiki/Cross-platform" class="mw-redirect" title="Cross-platform">Cross-platform</a></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Computing_platform" title="Computing platform">Platform</a></th><td class="infobox-data">Systems with <a href="/wiki/Java_(software_platform)" title="Java (software platform)">Java</a> and <a href="/wiki/Web_browser" title="Web browser">Web browsers</a> without Java</td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;">Available in</th><td class="infobox-data">16 languages</td></tr><tr><td colspan="2" class="infobox-full-data"><style data-mw-deduplicate="TemplateStyles:r1214851843">.mw-parser-output .hidden-begin{box-sizing:border-box;width:100%;padding:5px;border:none;font-size:95%}.mw-parser-output .hidden-title{font-weight:bold;line-height:1.6;text-align:left}.mw-parser-output .hidden-content{text-align:left}@media all and (max-width:500px){.mw-parser-output .hidden-begin{width:auto!important;clear:none!important;float:none!important}}</style><div class="hidden-begin mw-collapsible mw-collapsed" style=""><div class="hidden-title skin-nightmode-reset-color" style="background-color: transparent;">List of languages</div><div class="hidden-content mw-collapsible-content" style="">Catalan, Chinese, Czech, Danish, Dutch, English, French, German, Hungarian, Indonesian, Italian, Korean, Portuguese, Spanish, Turkish, Ukrainian<sup id="cite_ref-launchpad_1-0" class="reference"><a href="#cite_note-launchpad-1"><span class="cite-bracket">[</span>1<span class="cite-bracket">]</span></a></sup></div></div></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Software_categories#Categorization_approaches" title="Software categories">Type</a></th><td class="infobox-data"><a href="/wiki/Molecular_modelling" title="Molecular modelling">Molecular modelling</a></td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;"><a href="/wiki/Software_license" title="Software license">License</a></th><td class="infobox-data"><a href="/wiki/GNU_Lesser_General_Public_License" title="GNU Lesser General Public License">LGPL</a> 2.0</td></tr><tr><th scope="row" class="infobox-label" style="white-space: nowrap;">Website</th><td class="infobox-data"><span class="url"><a rel="nofollow" class="external text" href="http://www.jmol.org">www<wbr />.jmol<wbr />.org</a></span></td></tr></tbody></table> <p><b>Jmol</b> is computer <a href="/wiki/Software" title="Software">software</a> for <a href="/wiki/Molecular_modelling" title="Molecular modelling">molecular modelling</a> <a href="/wiki/Chemical_structure" title="Chemical structure">chemical structures</a> in <a href="/wiki/3D_computer_graphics" title="3D computer graphics">3-dimensions</a>.<sup id="cite_ref-Chen2008_2-0" class="reference"><a href="#cite_note-Chen2008-2"><span class="cite-bracket">[</span>2<span class="cite-bracket">]</span></a></sup> Jmol returns a 3D representation of a <a href="/wiki/Molecule" title="Molecule">molecule</a> that may be used as a teaching tool,<sup id="cite_ref-Herraez2006_3-0" class="reference"><a href="#cite_note-Herraez2006-3"><span class="cite-bracket">[</span>3<span class="cite-bracket">]</span></a></sup> or for research e.g., in <a href="/wiki/Chemistry" title="Chemistry">chemistry</a> and <a href="/wiki/Biochemistry" title="Biochemistry">biochemistry</a>. </p> <meta property="mw:PageProp/toc" /> <div class="mw-heading mw-heading2"><h2 id="Software">Software</h2><span class="mw-editsection"><span class="mw-editsection-bracket">[</span><a href="/w/index.php?title=Jmol&action=edit&section=1" title="Edit section: Software"><span>edit</span></a><span class="mw-editsection-bracket">]</span></span></div> <p>Jmol is written in the programming language <a href="/wiki/Java_(programming_language)" title="Java (programming language)">Java</a>, so it can run on the operating systems <a href="/wiki/Microsoft_Windows" title="Microsoft Windows">Windows</a>, <a href="/wiki/MacOS" title="MacOS">macOS</a>, <a href="/wiki/Linux" title="Linux">Linux</a>, and <a href="/wiki/Unix" title="Unix">Unix</a>, if Java is installed. It is <a href="/wiki/Free_and_open-source_software" title="Free and open-source software">free and open-source software</a> released under the <a href="/wiki/GNU_Lesser_General_Public_License" title="GNU Lesser General Public License">GNU Lesser General Public License</a> (LGPL) version 2.0. A standalone application and a <a href="/wiki/Software_development_kit" title="Software development kit">software development kit</a> (SDK) exist that can be integrated into other Java applications, such as <a href="/wiki/Bioclipse" title="Bioclipse">Bioclipse</a> and <a href="/wiki/Apache_Taverna" title="Apache Taverna">Taverna</a>. </p><p>A popular feature is an applet that can be integrated into web pages to display molecules in a variety of ways. For example, molecules can be displayed as <a href="/wiki/Ball-and-stick_model" title="Ball-and-stick model">ball-and-stick models</a>, <a href="/wiki/Space-filling_model" title="Space-filling model">space-filling models</a>, <a href="/wiki/Ribbon_diagram" title="Ribbon diagram">ribbon diagrams</a>, etc.<sup id="cite_ref-Herraez2007_4-0" class="reference"><a href="#cite_note-Herraez2007-4"><span class="cite-bracket">[</span>4<span class="cite-bracket">]</span></a></sup> Jmol supports a wide range of <a href="/wiki/Chemical_file_format" title="Chemical file format">chemical file formats</a>, including <a href="/wiki/Protein_Data_Bank_(file_format)" title="Protein Data Bank (file format)">Protein Data Bank</a> (pdb), <a href="/wiki/Crystallographic_Information_File" title="Crystallographic Information File">Crystallographic Information File</a> (cif), <a href="/wiki/MDL_Molfile" class="mw-redirect" title="MDL Molfile">MDL Molfile</a> (mol), and <a href="/wiki/Chemical_Markup_Language" title="Chemical Markup Language">Chemical Markup Language</a> (CML). There is also a <a href="/wiki/JavaScript" title="JavaScript">JavaScript</a>-only (<a href="/wiki/HTML5" title="HTML5">HTML5</a>) version, <i><b>JSmol</b></i>, that can be used on computers with no Java.<sup id="cite_ref-5" class="reference"><a href="#cite_note-5"><span class="cite-bracket">[</span>5<span class="cite-bracket">]</span></a></sup> </p><p>The Jmol applet, among other abilities, offers an alternative to the <a href="/wiki/MDL_Chime" title="MDL Chime">Chime</a> plug-in,<sup id="cite_ref-Herraez2006_3-1" class="reference"><a href="#cite_note-Herraez2006-3"><span class="cite-bracket">[</span>3<span class="cite-bracket">]</span></a></sup> which is no longer under active development. While Jmol has many features that Chime lacks, it does not claim to reproduce all Chime functions, most notably, the <i>Sculpt</i> mode. Chime requires <a href="/wiki/Plug-in_(computing)" title="Plug-in (computing)">plug-in</a> installation and <a href="/wiki/Internet_Explorer" title="Internet Explorer">Internet Explorer</a> 6.0 or <a href="/wiki/Mozilla_Firefox_2" class="mw-redirect" title="Mozilla Firefox 2">Firefox 2.0</a> on <a href="/wiki/Microsoft_Windows" title="Microsoft Windows">Microsoft Windows</a>, or <a href="/wiki/Netscape_Communicator" title="Netscape Communicator">Netscape Communicator</a> 4.8 on <a href="/wiki/Mac_OS_9" title="Mac OS 9">Mac OS 9</a>. Jmol requires <a href="/wiki/Java_(programming_language)" title="Java (programming language)">Java</a> installation and operates on a wide variety of platforms. For example, Jmol is fully functional in <a href="/wiki/Mozilla_Firefox" class="mw-redirect" title="Mozilla Firefox">Mozilla Firefox</a>, <a href="/wiki/Internet_Explorer" title="Internet Explorer">Internet Explorer</a>, <a href="/wiki/Opera_(web_browser)" title="Opera (web browser)">Opera</a>, <a href="/wiki/Google_Chrome" title="Google Chrome">Google Chrome</a>, and <a href="/wiki/Safari_(web_browser)" title="Safari (web browser)">Safari</a>. </p> <div class="mw-heading mw-heading2"><h2 id="Screenshots">Screenshots</h2><span class="mw-editsection"><span class="mw-editsection-bracket">[</span><a href="/w/index.php?title=Jmol&action=edit&section=2" title="Edit section: Screenshots"><span>edit</span></a><span class="mw-editsection-bracket">]</span></span></div> <ul class="gallery mw-gallery-traditional"> <li class="gallerybox" style="width: 155px"> <div class="thumb" style="width: 150px; height: 150px;"><span typeof="mw:File"><a href="/wiki/File:Jmol_screenshot_2hvy.jpg" class="mw-file-description" title="Crystal structure of an H/ACA box RNP from Pyrococcus furiosus"><img alt="Crystal structure of an H/ACA box RNP from Pyrococcus furiosus" src="//upload.wikimedia.org/wikipedia/commons/thumb/2/20/Jmol_screenshot_2hvy.jpg/120px-Jmol_screenshot_2hvy.jpg" decoding="async" width="120" height="120" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/2/20/Jmol_screenshot_2hvy.jpg/180px-Jmol_screenshot_2hvy.jpg 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/2/20/Jmol_screenshot_2hvy.jpg/240px-Jmol_screenshot_2hvy.jpg 2x" data-file-width="480" data-file-height="480" /></a></span></div> <div class="gallerytext">Crystal structure of an H/ACA box RNP from <i><a href="/wiki/Pyrococcus_furiosus" title="Pyrococcus furiosus">Pyrococcus furiosus</a></i></div> </li> <li class="gallerybox" style="width: 155px"> <div class="thumb" style="width: 150px; height: 150px;"><span typeof="mw:File"><a href="/wiki/File:Jmol_screenshot_hemoglobin.png" class="mw-file-description" title="Highlighting two salt bridges in hemoglobin tetramer (hemo group as sticks at bottom-right)"><img alt="Highlighting two salt bridges in hemoglobin tetramer (hemo group as sticks at bottom-right)" src="//upload.wikimedia.org/wikipedia/commons/thumb/3/3a/Jmol_screenshot_hemoglobin.png/120px-Jmol_screenshot_hemoglobin.png" decoding="async" width="120" height="120" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/3/3a/Jmol_screenshot_hemoglobin.png/180px-Jmol_screenshot_hemoglobin.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/3/3a/Jmol_screenshot_hemoglobin.png/240px-Jmol_screenshot_hemoglobin.png 2x" data-file-width="440" data-file-height="440" /></a></span></div> <div class="gallerytext">Highlighting two <a href="/wiki/Salt_bridge" title="Salt bridge">salt bridges</a> in <a href="/wiki/Hemoglobin" title="Hemoglobin">hemoglobin</a> tetramer (hemo group as sticks at bottom-right)</div> </li> <li class="gallerybox" style="width: 155px"> <div class="thumb" style="width: 150px; height: 150px;"><span typeof="mw:File"><a href="/wiki/File:Jmol_screenshot_zincfinger.png" class="mw-file-description" title="A fragment of transcription factor TFIIIA forming three consecutive zinc finger motifs, bound to a stretch of DNA"><img alt="A fragment of transcription factor TFIIIA forming three consecutive zinc finger motifs, bound to a stretch of DNA" src="//upload.wikimedia.org/wikipedia/commons/thumb/9/99/Jmol_screenshot_zincfinger.png/120px-Jmol_screenshot_zincfinger.png" decoding="async" width="120" height="120" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/9/99/Jmol_screenshot_zincfinger.png/180px-Jmol_screenshot_zincfinger.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/9/99/Jmol_screenshot_zincfinger.png/240px-Jmol_screenshot_zincfinger.png 2x" data-file-width="440" data-file-height="440" /></a></span></div> <div class="gallerytext">A fragment of <a href="/wiki/Transcription_factor" title="Transcription factor">transcription factor</a> TFIIIA forming three consecutive <a href="/wiki/Zinc_finger" title="Zinc finger">zinc finger</a> motifs, bound to a stretch of <a href="/wiki/DNA" title="DNA">DNA</a></div> </li> <li class="gallerybox" style="width: 155px"> <div class="thumb" style="width: 150px; height: 150px;"><span typeof="mw:File"><a href="/wiki/File:Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg" class="mw-file-description" title="Eubacterial 70S Ribosome from Thermus thermophilus"><img alt="Eubacterial 70S Ribosome from Thermus thermophilus" src="//upload.wikimedia.org/wikipedia/commons/thumb/8/8d/Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg/120px-Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg" decoding="async" width="120" height="98" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/8/8d/Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg/180px-Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/8/8d/Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg/240px-Jmol_screenshot_thermus_ribosome_1jgo_and_1giy.jpg 2x" data-file-width="400" data-file-height="325" /></a></span></div> <div class="gallerytext"><a href="/wiki/Eubacterial" class="mw-redirect" title="Eubacterial">Eubacterial</a> 70S Ribosome from <i><a href="/wiki/Thermus_thermophilus" title="Thermus thermophilus">Thermus thermophilus</a></i></div> </li> </ul> <div class="mw-heading mw-heading2"><h2 id="See_also">See also</h2><span class="mw-editsection"><span class="mw-editsection-bracket">[</span><a href="/w/index.php?title=Jmol&action=edit&section=3" title="Edit section: See also"><span>edit</span></a><span class="mw-editsection-bracket">]</span></span></div> <style data-mw-deduplicate="TemplateStyles:r1239009302">.mw-parser-output .portalbox{padding:0;margin:0.5em 0;display:table;box-sizing:border-box;max-width:175px;list-style:none}.mw-parser-output .portalborder{border:1px solid var(--border-color-base,#a2a9b1);padding:0.1em;background:var(--background-color-neutral-subtle,#f8f9fa)}.mw-parser-output .portalbox-entry{display:table-row;font-size:85%;line-height:110%;height:1.9em;font-style:italic;font-weight:bold}.mw-parser-output .portalbox-image{display:table-cell;padding:0.2em;vertical-align:middle;text-align:center}.mw-parser-output .portalbox-link{display:table-cell;padding:0.2em 0.2em 0.2em 0.3em;vertical-align:middle}@media(min-width:720px){.mw-parser-output .portalleft{clear:left;float:left;margin:0.5em 1em 0.5em 0}.mw-parser-output .portalright{clear:right;float:right;margin:0.5em 0 0.5em 1em}}</style><ul role="navigation" aria-label="Portals" class="noprint portalbox portalborder portalright"> <li class="portalbox-entry"><span class="portalbox-image"><span class="noviewer" typeof="mw:File"><span><img alt="" src="//upload.wikimedia.org/wikipedia/commons/thumb/3/31/Free_and_open-source_software_logo_%282009%29.svg/28px-Free_and_open-source_software_logo_%282009%29.svg.png" decoding="async" width="28" height="28" class="mw-file-element" srcset="//upload.wikimedia.org/wikipedia/commons/thumb/3/31/Free_and_open-source_software_logo_%282009%29.svg/42px-Free_and_open-source_software_logo_%282009%29.svg.png 1.5x, //upload.wikimedia.org/wikipedia/commons/thumb/3/31/Free_and_open-source_software_logo_%282009%29.svg/56px-Free_and_open-source_software_logo_%282009%29.svg.png 2x" data-file-width="512" data-file-height="512" /></span></span></span><span class="portalbox-link"><a href="/wiki/Portal:Free_and_open-source_software" title="Portal:Free and open-source software">Free and open-source software portal</a></span></li></ul> <ul><li><a href="/wiki/Chemistry_Development_Kit" title="Chemistry Development Kit">Chemistry Development Kit</a> (CDK)</li> <li><a href="/wiki/Comparison_of_software_for_molecular_mechanics_modeling" title="Comparison of software for molecular mechanics modeling">Comparison of software for molecular mechanics modeling</a></li> <li><a href="/wiki/List_of_free_and_open-source_software_packages" title="List of free and open-source software packages">List of free and open-source software packages</a></li> <li><a href="/wiki/List_of_molecular_graphics_systems" title="List of molecular graphics systems">List of molecular graphics systems</a></li> <li><a href="/wiki/Molecular_graphics" title="Molecular graphics">Molecular graphics</a></li> <li><a href="/wiki/Molecule_editor" title="Molecule editor">Molecule editor</a></li> <li><a href="/wiki/Proteopedia" title="Proteopedia">Proteopedia</a></li> <li><a href="/wiki/PyMOL" title="PyMOL">PyMOL</a></li> <li><a href="/wiki/SAMSON" title="SAMSON">SAMSON</a></li> <li><a href="/wiki/SMILES" class="mw-redirect" title="SMILES">SMILES</a></li></ul> <div class="mw-heading mw-heading2"><h2 id="References">References</h2><span class="mw-editsection"><span class="mw-editsection-bracket">[</span><a href="/w/index.php?title=Jmol&action=edit&section=4" title="Edit section: References"><span>edit</span></a><span class="mw-editsection-bracket">]</span></span></div> <style data-mw-deduplicate="TemplateStyles:r1239543626">.mw-parser-output .reflist{margin-bottom:0.5em;list-style-type:decimal}@media screen{.mw-parser-output .reflist{font-size:90%}}.mw-parser-output .reflist .references{font-size:100%;margin-bottom:0;list-style-type:inherit}.mw-parser-output .reflist-columns-2{column-width:30em}.mw-parser-output .reflist-columns-3{column-width:25em}.mw-parser-output .reflist-columns{margin-top:0.3em}.mw-parser-output .reflist-columns ol{margin-top:0}.mw-parser-output .reflist-columns li{page-break-inside:avoid;break-inside:avoid-column}.mw-parser-output .reflist-upper-alpha{list-style-type:upper-alpha}.mw-parser-output .reflist-upper-roman{list-style-type:upper-roman}.mw-parser-output .reflist-lower-alpha{list-style-type:lower-alpha}.mw-parser-output .reflist-lower-greek{list-style-type:lower-greek}.mw-parser-output .reflist-lower-roman{list-style-type:lower-roman}</style><div class="reflist"> <div class="mw-references-wrap"><ol class="references"> <li id="cite_note-launchpad-1"><span class="mw-cite-backlink"><b><a href="#cite_ref-launchpad_1-0">^</a></b></span> <span class="reference-text"><a rel="nofollow" class="external text" href="https://translations.launchpad.net/jmol">Jmol translations</a></span> </li> <li id="cite_note-Chen2008-2"><span class="mw-cite-backlink"><b><a href="#cite_ref-Chen2008_2-0">^</a></b></span> <span class="reference-text"><style data-mw-deduplicate="TemplateStyles:r1238218222">.mw-parser-output cite.citation{font-style:inherit;word-wrap:break-word}.mw-parser-output .citation q{quotes:"\"""\"""'""'"}.mw-parser-output .citation:target{background-color:rgba(0,127,255,0.133)}.mw-parser-output .id-lock-free.id-lock-free a{background:url("//upload.wikimedia.org/wikipedia/commons/6/65/Lock-green.svg")right 0.1em center/9px no-repeat}.mw-parser-output .id-lock-limited.id-lock-limited a,.mw-parser-output .id-lock-registration.id-lock-registration a{background:url("//upload.wikimedia.org/wikipedia/commons/d/d6/Lock-gray-alt-2.svg")right 0.1em center/9px no-repeat}.mw-parser-output .id-lock-subscription.id-lock-subscription a{background:url("//upload.wikimedia.org/wikipedia/commons/a/aa/Lock-red-alt-2.svg")right 0.1em center/9px no-repeat}.mw-parser-output .cs1-ws-icon a{background:url("//upload.wikimedia.org/wikipedia/commons/4/4c/Wikisource-logo.svg")right 0.1em center/12px no-repeat}body:not(.skin-timeless):not(.skin-minerva) .mw-parser-output .id-lock-free a,body:not(.skin-timeless):not(.skin-minerva) .mw-parser-output .id-lock-limited a,body:not(.skin-timeless):not(.skin-minerva) .mw-parser-output .id-lock-registration a,body:not(.skin-timeless):not(.skin-minerva) .mw-parser-output .id-lock-subscription a,body:not(.skin-timeless):not(.skin-minerva) .mw-parser-output .cs1-ws-icon a{background-size:contain;padding:0 1em 0 0}.mw-parser-output .cs1-code{color:inherit;background:inherit;border:none;padding:inherit}.mw-parser-output .cs1-hidden-error{display:none;color:var(--color-error,#d33)}.mw-parser-output .cs1-visible-error{color:var(--color-error,#d33)}.mw-parser-output .cs1-maint{display:none;color:#085;margin-left:0.3em}.mw-parser-output .cs1-kern-left{padding-left:0.2em}.mw-parser-output .cs1-kern-right{padding-right:0.2em}.mw-parser-output .citation .mw-selflink{font-weight:inherit}@media screen{.mw-parser-output .cs1-format{font-size:95%}html.skin-theme-clientpref-night .mw-parser-output .cs1-maint{color:#18911f}}@media screen and (prefers-color-scheme:dark){html.skin-theme-clientpref-os .mw-parser-output .cs1-maint{color:#18911f}}</style><cite id="CITEREFChen2008" class="citation cs2">Chen, Jim X. (2008), Springer (ed.), <a rel="nofollow" class="external text" href="https://books.google.com/books?id=Rv2gncprg3gC&q=jmol+is+3d&pg=PA471"><i>Guide to Graphics Software Tools</i></a>, p. 471, <a href="/wiki/ISBN_(identifier)" class="mw-redirect" title="ISBN (identifier)">ISBN</a> <a href="/wiki/Special:BookSources/978-1-84800-900-4" title="Special:BookSources/978-1-84800-900-4"><bdi>978-1-84800-900-4</bdi></a></cite><span title="ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Abook&rft.genre=book&rft.btitle=Guide+to+Graphics+Software+Tools&rft.pages=471&rft.date=2008&rft.isbn=978-1-84800-900-4&rft.aulast=Chen&rft.aufirst=Jim+X.&rft_id=https%3A%2F%2Fbooks.google.com%2Fbooks%3Fid%3DRv2gncprg3gC%26q%3Djmol%2Bis%2B3d%26pg%3DPA471&rfr_id=info%3Asid%2Fen.wikipedia.org%3AJmol" class="Z3988"></span></span> </li> <li id="cite_note-Herraez2006-3"><span class="mw-cite-backlink">^ <a href="#cite_ref-Herraez2006_3-0"><sup><i><b>a</b></i></sup></a> <a href="#cite_ref-Herraez2006_3-1"><sup><i><b>b</b></i></sup></a></span> <span class="reference-text"><link rel="mw-deduplicated-inline-style" href="mw-data:TemplateStyles:r1238218222"><cite id="CITEREFHerráez2006" class="citation cs2">Herráez, A (2006), <a rel="nofollow" class="external text" href="http://eric.ed.gov/ERICWebPortal/recordDetail?accno=EJ759053">"Biomolecules in the Computer: Jmol to the Rescue"</a>, <i>Biochemistry and Molecular Biology Education</i>, <b>34</b> (4): 255–61, <a href="/wiki/Doi_(identifier)" class="mw-redirect" title="Doi (identifier)">doi</a>:<span class="id-lock-free" title="Freely accessible"><a rel="nofollow" class="external text" href="https://doi.org/10.1002%2Fbmb.2006.494034042644">10.1002/bmb.2006.494034042644</a></span>, <a href="/wiki/PMID_(identifier)" class="mw-redirect" title="PMID (identifier)">PMID</a> <a rel="nofollow" class="external text" href="https://pubmed.ncbi.nlm.nih.gov/21638687">21638687</a>, <a href="/wiki/S2CID_(identifier)" class="mw-redirect" title="S2CID (identifier)">S2CID</a> <a rel="nofollow" class="external text" href="https://api.semanticscholar.org/CorpusID:36319720">36319720</a></cite><span title="ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.jtitle=Biochemistry+and+Molecular+Biology+Education&rft.atitle=Biomolecules+in+the+Computer%3A+Jmol+to+the+Rescue&rft.volume=34&rft.issue=4&rft.pages=255-61&rft.date=2006&rft_id=https%3A%2F%2Fapi.semanticscholar.org%2FCorpusID%3A36319720%23id-name%3DS2CID&rft_id=info%3Apmid%2F21638687&rft_id=info%3Adoi%2F10.1002%2Fbmb.2006.494034042644&rft.aulast=Herr%C3%A1ez&rft.aufirst=A&rft_id=http%3A%2F%2Feric.ed.gov%2FERICWebPortal%2FrecordDetail%3Faccno%3DEJ759053&rfr_id=info%3Asid%2Fen.wikipedia.org%3AJmol" class="Z3988"></span></span> </li> <li id="cite_note-Herraez2007-4"><span class="mw-cite-backlink"><b><a href="#cite_ref-Herraez2007_4-0">^</a></b></span> <span class="reference-text"><link rel="mw-deduplicated-inline-style" href="mw-data:TemplateStyles:r1238218222"><cite id="CITEREFHerráez2007" class="citation cs2">Herráez, A (2007), Lulu (ed.), <a rel="nofollow" class="external text" href="https://books.google.com/books?id=59kQFyfbsJMC&q=jmol+applet+web&pg=PA21"><i>How to Use Jmol to Study and Present Molecular Structures, Volume 1</i></a>, p. 21, <a href="/wiki/ISBN_(identifier)" class="mw-redirect" title="ISBN (identifier)">ISBN</a> <a href="/wiki/Special:BookSources/978-1-84799-259-8" title="Special:BookSources/978-1-84799-259-8"><bdi>978-1-84799-259-8</bdi></a></cite><span title="ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Abook&rft.genre=book&rft.btitle=How+to+Use+Jmol+to+Study+and+Present+Molecular+Structures%2C+Volume+1&rft.pages=21&rft.date=2007&rft.isbn=978-1-84799-259-8&rft.aulast=Herr%C3%A1ez&rft.aufirst=A&rft_id=https%3A%2F%2Fbooks.google.com%2Fbooks%3Fid%3D59kQFyfbsJMC%26q%3Djmol%2Bapplet%2Bweb%26pg%3DPA21&rfr_id=info%3Asid%2Fen.wikipedia.org%3AJmol" class="Z3988"></span></span> </li> <li id="cite_note-5"><span class="mw-cite-backlink"><b><a href="#cite_ref-5">^</a></b></span> <span class="reference-text"><link rel="mw-deduplicated-inline-style" href="mw-data:TemplateStyles:r1238218222"><cite class="citation web cs1"><a rel="nofollow" class="external text" href="https://web.archive.org/web/20180101184802/http://wiki.jmol.org/index.php/JSmol">"JSmol"</a>. Archived from <a rel="nofollow" class="external text" href="http://wiki.jmol.org/index.php/JSmol">the original</a> on 2018-01-01<span class="reference-accessdate">. Retrieved <span class="nowrap">2015-11-02</span></span>.</cite><span title="ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Abook&rft.genre=unknown&rft.btitle=JSmol&rft_id=http%3A%2F%2Fwiki.jmol.org%2Findex.php%2FJSmol&rfr_id=info%3Asid%2Fen.wikipedia.org%3AJmol" class="Z3988"></span></span> </li> </ol></div></div> <div class="mw-heading mw-heading2"><h2 id="External_links">External links</h2><span class="mw-editsection"><span class="mw-editsection-bracket">[</span><a href="/w/index.php?title=Jmol&action=edit&section=5" title="Edit section: External links"><span>edit</span></a><span class="mw-editsection-bracket">]</span></span></div> <style data-mw-deduplicate="TemplateStyles:r1235681985">.mw-parser-output .side-box{margin:4px 0;box-sizing:border-box;border:1px solid #aaa;font-size:88%;line-height:1.25em;background-color:var(--background-color-interactive-subtle,#f8f9fa);display:flow-root}.mw-parser-output .side-box-abovebelow,.mw-parser-output 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href="https://commons.wikimedia.org/wiki/Category:Jmol" class="extiw" title="commons:Category:Jmol">Jmol</a></span>.</div></div> </div> <ul><li><span class="official-website"><span class="url"><a rel="nofollow" class="external text" href="http://www.jmol.org">Official website</a></span></span> <ul><li><a rel="nofollow" class="external text" href="https://web.archive.org/web/20101118033410/http://wiki.jmol.org/">Wiki</a> with listings of <a rel="nofollow" class="external text" href="https://web.archive.org/web/20140720140401/http://wiki.jmol.org/index.php/Websites_Using_Jmol">websites</a>, <a rel="nofollow" class="external text" href="https://web.archive.org/web/20140620121150/http://wiki.jmol.org/index.php/Wikis_Using_Jmol">wikis</a>, and <a rel="nofollow" class="external text" href="https://web.archive.org/web/20170726083028/http://wiki.jmol.org/index.php/Moodles_Using_Jmol">moodles</a></li></ul></li> <li><link rel="mw-deduplicated-inline-style" href="mw-data:TemplateStyles:r1238218222"><cite id="CITEREFWillighagenHoward2007" class="citation journal cs1">Willighagen, Egon; Howard, Miguel (June 2007). <a rel="nofollow" class="external text" href="http://precedings.nature.com/documents/50/version/1">"Fast and Scriptable Molecular Graphics in Web Browsers without Java3D"</a>. <i>Nature Precedings</i>. <a href="/wiki/Doi_(identifier)" class="mw-redirect" title="Doi (identifier)">doi</a>:<span class="id-lock-free" title="Freely accessible"><a rel="nofollow" class="external text" href="https://doi.org/10.1038%2Fnpre.2007.50.1">10.1038/npre.2007.50.1</a></span>.</cite><span title="ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.jtitle=Nature+Precedings&rft.atitle=Fast+and+Scriptable+Molecular+Graphics+in+Web+Browsers+without+Java3D&rft.date=2007-06&rft_id=info%3Adoi%2F10.1038%2Fnpre.2007.50.1&rft.aulast=Willighagen&rft.aufirst=Egon&rft.au=Howard%2C+Miguel&rft_id=http%3A%2F%2Fprecedings.nature.com%2Fdocuments%2F50%2Fversion%2F1&rfr_id=info%3Asid%2Fen.wikipedia.org%3AJmol" class="Z3988"></span></li> <li><a href="https://www.mediawiki.org/wiki/Extension:Jmol" class="extiw" title="mw:Extension:Jmol">Jmol extension for MediaWiki</a></li> <li><a rel="nofollow" class="external text" href="http://biomodel.uah.es/en/DIY/JSME/draw.en.htm">Biomodel</a></li> <li><a rel="nofollow" class="external text" href="https://molview.org/">Molview</a></li></ul> <div class="navbox-styles"><style data-mw-deduplicate="TemplateStyles:r1129693374">.mw-parser-output .hlist dl,.mw-parser-output .hlist ol,.mw-parser-output .hlist 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hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"></div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Free_software" title="Free software">Free software</a></th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li>Avalon Cheminformatics Toolkit</li> <li><a href="/wiki/Bioclipse" title="Bioclipse">Bioclipse</a></li> <li><a href="/wiki/Blue_Obelisk" title="Blue Obelisk">Blue Obelisk</a></li> <li><a href="/wiki/Chemistry_Development_Kit" title="Chemistry Development Kit">Chemistry Development Kit</a></li> <li><a href="/wiki/Extensible_Computational_Chemistry_Environment" title="Extensible Computational Chemistry Environment">ECCE</a></li> <li><a href="/wiki/JOELib" title="JOELib">JOELib</a></li> <li><a href="/wiki/OELib" title="OELib">OELib</a></li> <li><a href="/wiki/Open_Babel" title="Open 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navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%">Free software</th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/APBS_(software)" title="APBS (software)">APBS</a></li> <li><a href="/wiki/Cantera_(software)" title="Cantera (software)">Cantera</a></li> <li><a href="/wiki/Kinetic_PreProcessor" title="Kinetic PreProcessor">KPP</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%">Proprietary</th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Autochem" title="Autochem">Autochem</a></li> <li><a href="/wiki/Chemical_WorkBench" title="Chemical WorkBench">Chemical WorkBench</a></li> <li><a href="/wiki/CHEMKIN" title="CHEMKIN">CHEMKIN</a></li> <li><a href="/wiki/COSILAB" title="COSILAB">COSILAB</a></li> <li><a href="/wiki/DelPhi_(software)" class="mw-redirect" title="DelPhi (software)">DelPhi</a></li> <li><a href="/wiki/Khimera" title="Khimera">Khimera</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Molecular_modelling" title="Molecular modelling">Molecular modelling</a> <br /> and <br /> <a href="/wiki/Visualization_(graphics)" title="Visualization (graphics)">visualization</a></th><td class="navbox-list-with-group navbox-list navbox-odd hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"><a href="/wiki/List_of_molecular_graphics_systems" title="List of molecular graphics systems">List of molecular graphics systems</a> </div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%">Free software</th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Ascalaph_Designer" title="Ascalaph Designer">Ascalaph Designer</a></li> <li><a href="/wiki/Avogadro_(software)" title="Avogadro (software)">Avogadro</a></li> <li><a href="/wiki/BALL" title="BALL">BALL</a></li> <li><a href="/wiki/Biskit" title="Biskit">Biskit</a></li> <li><a href="/wiki/Gabedit" title="Gabedit">Gabedit</a></li> <li><a href="/wiki/Ghemical" title="Ghemical">Ghemical</a></li> <li><a class="mw-selflink selflink">Jmol</a></li> <li><a href="/wiki/Molekel" title="Molekel">Molekel</a></li> <li><a href="/wiki/PyMOL" title="PyMOL">PyMOL</a></li> <li><a href="/wiki/QuteMol" title="QuteMol">QuteMol</a></li> <li><a href="/wiki/RasMol" title="RasMol">RasMol</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%">Proprietary</th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Abalone_(molecular_mechanics)" title="Abalone (molecular mechanics)">Abalone</a></li> <li><a href="/wiki/ACD/ChemSketch" title="ACD/ChemSketch">ACD/ChemSketch</a></li> <li><a href="/wiki/Atomistix_ToolKit" title="Atomistix ToolKit">Atomistix ToolKit</a></li> <li><a href="/wiki/ChemDraw" title="ChemDraw">ChemDraw</a></li> <li><a href="/wiki/ChemWindow" title="ChemWindow">ChemWindow</a></li> <li><a href="/wiki/EzMol" title="EzMol">EzMol</a></li> <li><a href="/wiki/Gaussian_(software)" title="Gaussian (software)">Gaussian</a></li> <li><a href="/wiki/Schr%C3%B6dinger_(company)" class="mw-redirect" title="Schrödinger (company)">Maestro</a></li> <li><a href="/wiki/MarvinSketch" class="mw-redirect" title="MarvinSketch">MarvinSketch</a></li> <li><a href="/wiki/MarvinView" class="mw-redirect" title="MarvinView">MarvinView</a></li> <li><a href="/wiki/MODELLER" title="MODELLER">MODELLER</a></li> <li><a href="/wiki/Molecular_Operating_Environment" title="Molecular Operating Environment">Molecular Operating Environment</a></li> <li><a href="/wiki/SAMSON" title="SAMSON">SAMSON</a></li> <li><a href="/wiki/Spartan_(chemistry_software)" title="Spartan (chemistry software)">Spartan</a></li> <li><a href="/wiki/UCSF_Chimera" title="UCSF Chimera">UCSF Chimera</a></li> <li><a href="/wiki/Visual_Molecular_Dynamics" title="Visual Molecular Dynamics">VMD</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Docking_(molecular)" title="Docking (molecular)">Molecular docking</a></th><td class="navbox-list-with-group navbox-list navbox-even hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"><a href="/wiki/List_of_protein-ligand_docking_software" title="List of protein-ligand docking software">List of protein-ligand docking software</a> </div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Free_software" title="Free software">Free software</a></th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/AutoDock" title="AutoDock">AutoDock</a></li> <li><a href="/wiki/AutoDock_Vina" class="mw-redirect" title="AutoDock Vina">AutoDock Vina</a></li> <li><a href="/wiki/FlexAID" title="FlexAID">FlexAID</a></li> <li><a href="/wiki/RDock" title="RDock">rDock</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Proprietary_software" title="Proprietary software">Proprietary</a></th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Glide_(docking)" title="Glide (docking)">Glide</a></li> <li><a href="/wiki/LeDock" title="LeDock">LeDock</a></li> <li><a href="/wiki/Molecular_Operating_Environment" title="Molecular Operating Environment">Molecular Operating Environment</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Molecular_dynamics" title="Molecular dynamics">Molecular dynamics</a></th><td class="navbox-list-with-group navbox-list navbox-odd hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"></div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Free_software" title="Free software">Free software</a></th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/CP2K" title="CP2K">CP2K</a></li> <li><a href="/wiki/GROMACS" title="GROMACS">GROMACS</a></li> <li><a href="/wiki/LAMMPS" title="LAMMPS">LAMMPS</a></li> <li><a href="/wiki/OpenMM" title="OpenMM">OpenMM</a></li> <li><a href="/wiki/PLUMED" title="PLUMED">PLUMED</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Proprietary_software" title="Proprietary software">Proprietary</a></th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Abalone_(molecular_mechanics)" title="Abalone (molecular mechanics)">Abalone</a></li> <li><a href="/wiki/AMBER" title="AMBER">AMBER</a></li> <li><a href="/wiki/CHARMM" title="CHARMM">CHARMM</a></li> <li><a href="/wiki/Car%E2%80%93Parrinello_molecular_dynamics" title="Car–Parrinello molecular dynamics">CPMD</a></li> <li><a href="/wiki/Desmond_(software)" title="Desmond (software)">Desmond</a></li> <li><a href="/wiki/GROMOS" title="GROMOS">GROMOS</a></li> <li><a href="/wiki/NAMD" title="NAMD">NAMD</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Quantum_chemistry" title="Quantum chemistry">Quantum chemistry</a></th><td class="navbox-list-with-group navbox-list navbox-odd hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"><a href="/wiki/List_of_quantum_chemistry_and_solid-state_physics_software" title="List of quantum chemistry and solid-state physics software">List of quantum chemistry and solid-state physics software</a> </div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%">Free software</th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/ABINIT" title="ABINIT">ABINIT</a></li> <li><a href="/wiki/ACES_(computational_chemistry)" title="ACES (computational chemistry)">ACES</a> (CFOUR)</li> <li><a href="/wiki/AIMAll" title="AIMAll">AIMAll</a></li> <li><a href="/wiki/BigDFT" title="BigDFT">BigDFT</a></li> <li><a href="/wiki/COLUMBUS" title="COLUMBUS">COLUMBUS</a></li> <li><a href="/wiki/CONQUEST" title="CONQUEST">CONQUEST</a></li> <li><a href="/wiki/CP2K" title="CP2K">CP2K</a></li> <li><a href="/wiki/Dalton_(program)" title="Dalton (program)">Dalton</a></li> <li><a href="/wiki/Dirac_(software)" title="Dirac (software)">DIRAC</a></li> <li><a href="/wiki/DP_code" title="DP code">DP code</a></li> <li><a href="/wiki/FLEUR" title="FLEUR">FLEUR</a></li> <li><a href="/wiki/FreeON" title="FreeON">FreeON</a></li> <li><a href="/wiki/MADNESS" title="MADNESS">MADNESS</a></li> <li><a href="/wiki/MOPAC" title="MOPAC">MOPAC</a></li> <li><a href="/wiki/MPQC" class="mw-redirect" title="MPQC">MPQC</a></li> <li><a href="/wiki/NWChem" title="NWChem">NWChem</a></li> <li><a href="/wiki/Octopus_(software)" title="Octopus (software)">Octopus</a></li> <li><a href="/wiki/MOLCAS" title="MOLCAS">OpenMolcas</a></li> <li><a href="/wiki/PARSEC" title="PARSEC">PARSEC</a></li> <li><a href="/wiki/PSI_(computational_chemistry)" title="PSI (computational chemistry)">PSI</a></li> <li><a href="/wiki/PyQuante" title="PyQuante">PyQuante</a></li> <li><a href="/wiki/PySCF" title="PySCF">PySCF</a></li> <li><a href="/wiki/Quantum_ESPRESSO" title="Quantum ESPRESSO">Quantum ESPRESSO</a> (PWscf)</li> <li><a href="/wiki/RMG_(program)" title="RMG (program)">RMG</a></li> <li><a href="/wiki/SIESTA_(computer_program)" title="SIESTA (computer program)">SIESTA</a></li> <li><a href="/wiki/Valence_bond_programs" title="Valence bond programs">VB2000</a></li> <li><a href="/wiki/YAMBO_code" title="YAMBO code">YAMBO code</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%">Proprietary</th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Amsterdam_Density_Functional" title="Amsterdam Density Functional">ADF</a></li> <li><a href="/wiki/AMPAC" title="AMPAC">AMPAC</a></li> <li><a href="/wiki/DMol3" title="DMol3">DMol3</a></li> <li><a href="/wiki/CADPAC" title="CADPAC">CADPAC</a></li> <li><a href="/wiki/CASINO" title="CASINO">CASINO</a></li> <li><a href="/wiki/CASTEP" title="CASTEP">CASTEP</a></li> <li><a href="/wiki/Car%E2%80%93Parrinello_molecular_dynamics" title="Car–Parrinello molecular dynamics">CPMD</a></li> <li><a href="/wiki/Valence_bond_programs" title="Valence bond programs">CRUNCH</a></li> <li><a href="/wiki/CRYSTAL_(software)" title="CRYSTAL (software)">CRYSTAL</a></li> <li><a href="/wiki/Firefly_(computer_program)" title="Firefly (computer program)">Firefly</a></li> <li><a href="/wiki/GAMESS_(UK)" title="GAMESS (UK)">GAMESS (UK)</a></li> <li><a href="/wiki/GAMESS_(US)" title="GAMESS (US)">GAMESS (US)</a></li> <li><a href="/wiki/Gaussian_(software)" title="Gaussian (software)">Gaussian</a></li> <li><a href="/wiki/Jaguar_(software)" title="Jaguar (software)">Jaguar</a></li> <li><a href="/wiki/MOLCAS" title="MOLCAS">MOLCAS</a></li> <li><a href="/wiki/MOLPRO" title="MOLPRO">MOLPRO</a></li> <li><a href="/wiki/ONETEP" title="ONETEP">ONETEP</a></li> <li><a href="/wiki/OpenAtom" title="OpenAtom">OpenAtom</a></li> <li><a href="/wiki/ORCA_(quantum_chemistry_program)" title="ORCA (quantum chemistry program)">ORCA</a></li> <li><a href="/wiki/PLATO_(computational_chemistry)" title="PLATO (computational chemistry)">PLATO</a></li> <li><a href="/wiki/PQS_(software)" title="PQS (software)">PQS</a></li> <li><a href="/wiki/Q-Chem" title="Q-Chem">Q-Chem</a></li> <li><a href="/wiki/Quantemol" title="Quantemol">Quantemol</a></li> <li><a href="/wiki/Scigress" title="Scigress">Scigress</a></li> <li><a href="/wiki/Spartan_(chemistry_software)" title="Spartan (chemistry software)">Spartan</a></li> <li><a href="/wiki/TeraChem" title="TeraChem">TeraChem</a></li> <li><a href="/wiki/TURBOMOLE" title="TURBOMOLE">TURBOMOLE</a></li> <li><a href="/wiki/Vienna_Ab_initio_Simulation_Package" title="Vienna Ab initio Simulation Package">VASP</a></li> <li><a href="/wiki/WIEN2k" title="WIEN2k">WIEN2k</a></li> <li><a href="/wiki/Valence_bond_programs" title="Valence bond programs">XMVB</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%"><a href="/wiki/Skeletal_structure" class="mw-redirect" title="Skeletal structure">Skeletal structure</a> drawing</th><td class="navbox-list-with-group navbox-list navbox-odd hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"></div><table class="nowraplinks navbox-subgroup" style="border-spacing:0"><tbody><tr><th scope="row" class="navbox-group" style="width:1%">Free software</th><td class="navbox-list-with-group navbox-list navbox-even" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/JChemPaint" title="JChemPaint">JChemPaint</a></li> <li><a href="/wiki/Molsketch" title="Molsketch">Molsketch</a></li> <li><a href="/wiki/XDrawChem" title="XDrawChem">XDrawChem</a></li></ul> </div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%">Proprietary</th><td class="navbox-list-with-group navbox-list navbox-odd" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/ACD/ChemSketch" title="ACD/ChemSketch">ACD/ChemSketch</a></li> <li><a href="/wiki/ISIS/Draw" title="ISIS/Draw">BIOVIA Draw</a></li> <li>ChemDoodle</li> <li><a href="/wiki/ChemDraw" title="ChemDraw">ChemDraw</a></li> <li><a href="/wiki/ChemWindow" title="ChemWindow">ChemWindow</a></li> <li><a href="/wiki/JME_Molecule_Editor" title="JME Molecule Editor">JME Molecule Editor</a></li> <li><a href="/wiki/MarvinSketch" class="mw-redirect" title="MarvinSketch">MarvinSketch</a></li></ul> </div></td></tr></tbody></table><div></div></td></tr><tr><th scope="row" class="navbox-group" style="width:1%">Others</th><td class="navbox-list-with-group navbox-list navbox-even hlist" style="width:100%;padding:0"><div style="padding:0 0.25em"> <ul><li><a href="/wiki/Aqion" title="Aqion">Aqion</a></li> <li><a href="/wiki/Eulim" title="Eulim">Eulim</a></li> <li><a href="/wiki/EXC_code" title="EXC code">EXC code</a></li> <li>GenX</li> <li>GSim</li> <li><a href="/wiki/Mercury_(crystallography)" title="Mercury (crystallography)">Mercury</a></li> <li><a href="/wiki/CrystalExplorer" title="CrystalExplorer">CrystalExplorer</a></li> <li><a href="/wiki/Internal_Coordinate_Mechanics" title="Internal Coordinate Mechanics">ICM</a> (ICM-Browser)</li> <li><a href="/wiki/Materials_Studio" title="Materials Studio">Materials Studio</a></li> <li><a href="/wiki/Molden" title="Molden">Molden</a></li> <li><a href="/wiki/OpenChrom" title="OpenChrom">OpenChrom</a></li> <li>SASHIMI</li></ul> </div></td></tr></tbody></table></div>    </div><noscript><img src="https://login.wikimedia.org/wiki/Special:CentralAutoLogin/start?type=1x1" alt="" width="1" height="1" style="border: none; position: absolute;"></noscript> <div class="printfooter" data-nosnippet="">Retrieved from "<a dir="ltr" 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