CINXE.COM

Data visualisation - SIB Swiss Institute of Bioinformatics | Expasy

<!doctype html> <html data-n-head-ssr lang="en" class="font-body antialiased text-neutral-900" data-n-head="%7B%22lang%22:%7B%22ssr%22:%22en%22%7D,%22class%22:%7B%22ssr%22:%22font-body%20antialiased%20text-neutral-900%22%7D%7D"> <head > <meta data-n-head="ssr" charset="utf-8"><meta data-n-head="ssr" name="viewport" content="width=device-width, initial-scale=1"><meta data-n-head="ssr" name="google-site-verification" content="wW27Qr93sFIEvPN3uocwfHWDLqMkl1yRN1dtmrJNjyY"><meta data-n-head="ssr" data-hid="description" name="description" content="Data visualisation in high-quality scientific databases and software tools using Expasy, the Swiss Bioinformatics Resource Portal."><title>Data visualisation - SIB Swiss Institute of Bioinformatics | Expasy</title><link data-n-head="ssr" rel="icon" type="image/x-icon" href="/favicon.ico"><link data-n-head="ssr" rel="stylesheet" href="https://fonts.bunny.net/css?family=Source+Sans+Pro:wght@400;600;700&amp;display=swap"><script data-n-head="ssr" type="application/ld+json">{"@context":"https://schema.org/","@type":"DataSet","@id":"https://www.expasy.org/","http://purl.org/dc/terms/conformsTo":{"@id":"https://bioschemas.org/profiles/Dataset/1.0-RELEASE","@type":"CreativeWork"},"name":"Expasy","description":"Expasy is the bioinformatics resource portal of the SIB Swiss Institute of Bioinformatics.","url":"https://www.expasy.org/","identifier":"https://doi.org/10.25504/FAIRsharing.ceeffa","thumbnailUrl":"https://www.expasy.org/images/expasy-homepage.png","keywords":"bioinformatics, registry, resource, database, tool, SIB, Swiss, Swiss Institute of Bioinformatics","isAccessibleForFree":true,"potentialAction":{"@type":"SearchAction","target":"https://www.expasy.org/search/{search_term_string}?type=keyword","query-input":"required name=search_term_string"},"citation":{"@type":"ScholarlyArticle","name":"Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users.","author":[{"@type":"Person","givenName":"Severine","familyName":"Duvaud","identifier":"http://orcid.org/0000-0001-7892-9678"},{"@type":"Person","givenName":"Chiara","familyName":"Gabella","identifier":"http://orcid.org/0000-0002-7104-5025"},{"@type":"Person","givenName":"Frederique","familyName":"Lisacek","identifier":"https://orcid.org/0000-0002-0948-4537"},{"@type":"Person","givenName":"Heinz","familyName":"Stockinger","identifier":"https://orcid.org/0000-0003-4666-7719"},{"@type":"Person","givenName":"Vassilios","familyName":"Ioannidis","identifier":"https://orcid.org/0000-0002-4209-2578"},{"@type":"Person","givenName":"Christine","familyName":"Durinx","identifier":"https://orcid.org/0000-0003-4237-8899"}],"identifier":"http://dx.doi.org/10.1093/nar/gkab225","sameas":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8265094/"},"provider":{"@type":"Organization","sameAs":"https://ror.org/002n09z45","name":"SIB Swiss Institute of Bioinformatics","url":"https://www.sib.swiss/"}}</script><link rel="preload" href="/_nuxt/734f39f.js" as="script"><link rel="preload" href="/_nuxt/78684c8.js" as="script"><link rel="preload" href="/_nuxt/e4f4568.js" as="script"><link rel="preload" href="/_nuxt/css/e86fcaf.css" as="style"><link rel="preload" href="/_nuxt/73b71d2.js" as="script"><link rel="preload" href="/_nuxt/css/8aeb120.css" as="style"><link rel="preload" href="/_nuxt/a27e3d3.js" as="script"><link rel="stylesheet" href="/_nuxt/css/e86fcaf.css"><link rel="stylesheet" href="/_nuxt/css/8aeb120.css"> </head> <body > <div data-server-rendered="true" id="__nuxt"><!----><div id="__layout"><div><div class="top"></div> <header role="banner" class="mb-4"><div class="flex max-sm:flex-col container"><a href="/" class="flex-1 max-sm:hidden nuxt-link-active"><div class="pt-6"><img src="/images/expasy-addon.png" srcset="/images/expasy-addon.png, /images/expasy-addon@2x.png 2x" alt="Expasy: Swiss Bioinformatics Resource Portal" class="inline-block"></div></a> <nav role="navigation" class="max-sm:w-full"><ul class="nav"><li class="inline-block"><a href="/" class="nav__link nuxt-link-active"> Home </a></li> <li class="inline-block"><a href="/about" class="nav__link"> About </a></li> <li class="inline-block"><a href="https://www.sib.swiss/about/news" target="_blank" rel="noopener noreferer" class="nav__link"> SIB News </a></li> <li class="inline-block"><a href="/contact" class="nav__link"> Contact </a></li></ul></nav></div></header> <main role="main" class="page-main"><div class="container container--xs"><form action="/search" method="get" class="search"><div class="text-center"><img src="/images/expasy-homepage.png" srcset="/images/expasy-homepage.png, /images/expasy-homepage@2x.png 2x" alt="Expasy: Swiss Bioinformatics Resource Portal" class="mb-8 inline-block md:hidden"></div> <div class="flex mb-1"><label for="search" class="inline-block h4 mb-2 sr-only"> Explore high-quality biological data resources </label> <input id="search" name="search" type="search" required="required" class="field search__input"> <button type="submit" class="btn search__submit"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--search icon--150"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#search"></use></svg></button></div> <div class="text-sm"> e.g. <a href="/search/blast">BLAST</a>, <a href="/search/uniprot">UniProt</a>, <a href="/search/msh6">MSH6</a>, <a href="/search/albumin">Albumin</a>... </div> <!----></form></div> <div class="container"><!----> <section class="section-no-hit py-5 section-no-hit--is-hidden"><button class="framed"> You can also query &quot;Data visualisation&quot; into a selection of SIB databases in parallel <span><svg focusable="false" aria-labelledby="idpowbfwdx1" role="img" class="icon icon--plus icon--100"><title id="idpowbfwdx1">Hide Hits section</title> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#plus"></use></svg></span></button></section> <section class="py-5 border-neutral-200 border-t"><button class="framed mb-4"><strong>“Data visualisation”</strong> queried in 19 SIB databases <span><svg focusable="false" aria-labelledby="id4b2sx56fz" role="img" class="icon icon--minus icon--100"><title id="id4b2sx56fz">Display Hits section</title> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#minus"></use></svg></span></button> <div class="flex-grid flex-grid--even"><div class="md:w-1/2 lg:w-1/4 flex-grid__item w-full"><h3 class="search-page__title h4"><svg aria-hidden="true" focusable="false" role="img" class="mr-2 text-primary-500 icon icon--stru-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#stru-biology"></use></svg> Structural Biology </h3> <div test="swiss_model" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> SWISS-MODEL Repository </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Protein structure homology models </div></div> <div test="modelarchive" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> ModelArchive </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Repository of predicted macromolecular structure models </div></div> <div test="swissdock" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> SwissDock </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Docking of small ligands into protein active sites </div></div> <h3 class="search-page__title h4"><svg aria-hidden="true" focusable="false" role="img" class="mr-2 text-primary-500 icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> System Biology </h3> <div test="metanetx" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> MetaNetX </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Metabolic network repository &amp; analysis </div></div> <div test="cellausorus" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> Cellosaurus </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Knowledge resource on cell lines </div></div></div> <div class="md:w-1/2 lg:w-1/4 flex-grid__item w-full"><h3 class="search-page__title h4"><svg aria-hidden="true" focusable="false" role="img" class="mr-2 text-primary-500 icon icon--gene icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#gene"></use></svg> Genes &amp; Genomes </h3> <div test="bgee" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> Bgee </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Gene expression expertise </div></div> <h3 class="search-page__title h4"><svg aria-hidden="true" focusable="false" role="img" class="mr-2 text-primary-500 icon icon--evolution icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#evolution"></use></svg> Evolution &amp; Phylogeny </h3> <div test="oma" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> OMA </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Orthology inference among complete genomes </div></div> <div test="ortho_db" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> OrthoDB </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Ortholog evolutionary and functional annotations </div></div> <div test="selectome" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> Selectome </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Database of positive selection </div></div></div> <div class="lg:w-1/2 flex-grid__item w-full"><div class="flex-grid flex-grid--even"><div class="flex-grid__item w-full"><h3 class="search-page__title h4"><svg aria-hidden="true" focusable="false" role="img" class="mr-2 text-primary-500 icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> Proteins &amp; Proteomes </h3></div> <div class="md:w-1/2 flex-grid__item w-full"><div test="prosite" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> PROSITE </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Protein family and domain database </div></div> <div test="string" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> STRING </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Protein-protein interaction networks and enrichment analysis </div></div> <div test="uniprotkb" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> UniProtKB </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Protein sequence database </div></div> <div test="viralzone" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> ViralZone </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Fact sheets about viruses linked to sequence databases </div></div> <div test="enzyme" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> ENZYME </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Enzyme nomenclature database </div></div></div> <div class="md:w-1/2 flex-grid__item w-full"><div test="hamap" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> HAMAP </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> UniProtKB family classification and annotation </div></div> <div test="myhits" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> MyHits </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Relationships between protein sequences and motifs </div></div> <div test="swisslipids" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> SwissLipids </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Knowledge resource for lipids </div></div> <div test="venomzone" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> VenomZone </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Portal to venom protein UniProtKB entries </div></div> <div test="proteione_universe_atlas" class="mb-2"><div class="hit__header flex"><div class="flex-1"><h4 class="h5"> Protein Universe Atlas </h4></div> <div class="loader"><div></div> <div></div> <div></div> <div></div></div></div> <div class="text-sm text-neutral-700"> Interactive, annotated similarity network of all proteins </div></div></div></div></div></div></section> <section class="py-5 border-neutral-200 border-t"><h2 class="h3 mb-5"> Searching resources for <span class="font-bold">“Data visualisation”</span> <div class="mb-1 loader loader--md"><div></div> <div></div> <div></div> <div></div></div></h2> <div class="py-32"></div></section></div></main> <!----> <footer role="contentinfo" class="text-sm text-neutral-700 max-sm:text-center sm:mt-12 pt-8 pb-8 bg-neutral-100"><div class="container"><div class="flex max-sm:flex-col sm:items-center"><div class="md:flex-1 mb-8 md:mb-0"><div class="max-w-sm md:max-w-3xl md:pr-12"><svg aria-hidden="true" focusable="false" role="img" class="md:mr-2 mb-2 inline-block icon icon--sib-mark icon--sib-mark"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sib-mark"></use></svg> <div class="md:inline-block"> Expasy is operated by the <a href="https://sib.swiss" target="blank" rel="noopener noreferer">SIB Swiss Institute of Bioinformatics</a> | <a href="/terms-of-use"> Terms of Use </a></div></div></div> <a href="#top"> Back to the top </a></div></div></footer></div></div></div><script>window.__NUXT__=(function(a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p,q,r,s,t,u,v,w,x,y,z,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,_,$,aa,ab,ac,ad,ae,af,ag,ah,ai,aj,ak,al,am,an,ao,ap,aq,ar,as,at,au,av,aw,ax,ay,az,aA,aB,aC,aD,aE,aF,aG,aH,aI,aJ,aK,aL,aM,aN,aO,aP,aQ,aR,aS,aT,aU,aV,aW,aX,aY,aZ,a_,a$,ba){return {layout:"default",data:[{}],fetch:{},error:a,state:{"resources-filters":{categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:f,title:l,icon:m,children:[]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]},{id:O,title:Z,icon:_,children:[]}],types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],filters:[]},resources:{resources:[{id:696,title:"ASAP",slug:"asap",pinned:V,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fasap.epfl.ch\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fasap.epfl.ch\u002Fhome\u002Ftutorial",short_description:"Web-based, cooperative portal for single-cell data analyses",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:p,title:A,icon:k,children:[]}],created_at:"2020-11-16T15:15:41.000000Z",updated_at:"2024-10-14T14:15:40.000000Z",typesAndCategories:[p,c]},{id:720,title:"MetaNetX SPARQL endpoint",slug:"metanetx-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Frdf.metanetx.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to MetaNetX",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-09-16T09:47:08.000000Z",updated_at:"2024-08-22T15:23:30.000000Z",typesAndCategories:[f,h,d]},{id:g,title:"MyHits",slug:"myhits",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmyhits.sib.swiss",documentation_url:aK,tutorial_url:aK,short_description:"Relationships between protein sequences and motifs",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:ak,updated_at:"2024-08-15T14:06:15.000000Z",typesAndCategories:[f,d,c]},{id:695,title:"neXtProt SPARQL endpoint",slug:"nextprot-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsnorql.nextprot.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to the neXtProt human protein knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-11-12T14:13:19.000000Z",updated_at:"2024-08-23T13:43:43.000000Z",typesAndCategories:[f,d]},{id:644,title:"HAMAP-Scan",slug:"hamap-scan",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002F",documentation_url:"https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002Fhamap_scan_userman.html",tutorial_url:a,short_description:"Scanning of protein sequences against HAMAP families",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T18:14:20.000000Z",updated_at:"2024-08-14T13:27:26.000000Z",typesAndCategories:[f,c]},{id:19,title:"MetaNetX",slug:"metanetx",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.metanetx.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Metabolic network repository & analysis",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-10-14T14:18:21.000000Z",typesAndCategories:[f,h,d,c]},{id:657,title:"CRUNCH",slug:"crunch",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcrunch.unibas.ch",documentation_url:a,tutorial_url:a,short_description:"Automated pipeline for ChIP-seq data analysis",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T11:14:03.000000Z",updated_at:"2024-11-11T09:39:06.000000Z",typesAndCategories:[g,p,h,c]},{id:608,title:"Glydin'",slug:"glydin",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fepitopes\u002F",documentation_url:a,tutorial_url:a,short_description:"Network representation of known glycan determinants",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:19:23.000000Z",updated_at:"2020-07-16T12:48:56.000000Z",typesAndCategories:[o,c]},{id:732,title:"STRING SPARQL endpoint",slug:"string-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.string-db.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to the STRING knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-10-10T12:11:19.000000Z",updated_at:"2024-11-07T12:49:22.000000Z",typesAndCategories:[f,h,d]},{id:615,title:"FastEpistasis",slug:"fastepistasis",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fgitlab.sib.swiss\u002Ftschuepb\u002FFastEpistasis",documentation_url:a,tutorial_url:a,short_description:"Tool for quantitative trait epistasis",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-26T18:22:20.000000Z",updated_at:"2024-08-21T12:13:05.000000Z",typesAndCategories:[g,c]},{id:727,title:"Glittr",slug:"glittr",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fglittr.org",documentation_url:a,tutorial_url:a,short_description:"Git repositories with bioinformatics training material",license_type:{id:R,title:aa,link_url:al,link_label:am,created_at:b,updated_at:an},categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2023-05-22T09:22:22.000000Z",updated_at:"2024-10-24T08:57:39.000000Z",typesAndCategories:[g,p,d]},{id:z,title:"ENZYME",slug:"enzyme",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fenzyme.expasy.org\u002F",documentation_url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Fenzyme\u002Fenzuser.txt",tutorial_url:a,short_description:"Enzyme nomenclature database",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:X,updated_at:"2024-08-16T13:35:13.000000Z",typesAndCategories:[f,d]},{id:711,title:"SVIP",slug:"svip",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fsvip.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"Clinical interpretation of variants in cancer",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]}],created_at:"2022-01-11T12:13:40.000000Z",updated_at:"2023-02-01T14:42:29.000000Z",typesAndCategories:[j,g,d,c]},{id:733,title:"BEAST2",slug:"beast",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.beast2.org\u002F",documentation_url:"https:\u002F\u002Fwww.beast2.org\u002Ffaq\u002F",tutorial_url:"https:\u002F\u002Fwww.beast2.org\u002Ftutorials\u002F",short_description:"Bayesian evolutionary analysis by sampling trees",license_type:{id:at,title:au,link_url:av,link_label:aw,created_at:af,updated_at:af},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:z,title:N,icon:G,children:[]}],created_at:"2023-11-20T10:40:21.000000Z",updated_at:"2024-08-15T14:10:06.000000Z",typesAndCategories:[j,z,c]},{id:616,title:"ESTscan",slug:"estscan",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Festscan",documentation_url:a,tutorial_url:a,short_description:"Detect coding regions in EST sequences",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T18:24:46.000000Z",updated_at:"2024-08-22T13:25:50.000000Z",typesAndCategories:[j,c]},{id:640,title:"Myristoylator",slug:"myristoylator",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002Fmyristoylator-doc.html",tutorial_url:a,short_description:"N-terminal myristoylation of proteins by neural networks",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:55:49.000000Z",updated_at:"2024-08-14T13:46:00.000000Z",typesAndCategories:[f,c]},{id:650,title:"UniProt ClustalO",slug:"uniprot-clustalo",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.uniprot.org\u002Falign\u002F",documentation_url:a,tutorial_url:a,short_description:"Align two or more protein sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T09:55:02.000000Z",updated_at:"2024-08-21T13:09:05.000000Z",typesAndCategories:[f,c]},{id:740,title:"EnzChemRED",slug:"enzchemred",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Frhea\u002Fnlp\u002F",documentation_url:"https:\u002F\u002Fpmc.ncbi.nlm.nih.gov\u002Farticles\u002FPMC11384730\u002F",tutorial_url:a,short_description:"Enzyme Chemistry Relation Extraction Dataset",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2024-11-18T08:54:45.000000Z",updated_at:"2024-11-18T12:00:56.000000Z",typesAndCategories:[f,d]},{id:686,title:"TASer",slug:"taser",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fshiny.bioinformatics.unibe.ch\u002Fapps\u002Ftaser\u002F",documentation_url:a,tutorial_url:a,short_description:"Search tool associated to TASmania",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-07-24T12:42:30.000000Z",updated_at:"2024-07-31T09:44:32.000000Z",typesAndCategories:[g,c]},{id:600,title:"MADAP",slug:"madap",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Fmadap\u002F",documentation_url:a,tutorial_url:a,short_description:"Clustering tool of genomic sites",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-26T16:03:01.000000Z",updated_at:"2024-07-31T10:14:57.000000Z",typesAndCategories:[g,c]},{id:C,title:"HAMAP",slug:"hamap",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fhamap.expasy.org\u002F",documentation_url:"https:\u002F\u002Fhamap.expasy.org\u002Fweb_view_HAMAP_profiles.html",tutorial_url:a,short_description:"UniProtKB family classification and annotation",license_type:{id:p,title:ax,link_url:ay,link_label:az,created_at:b,updated_at:aA},categories:[{id:f,title:l,icon:m,children:[]}],created_at:ak,updated_at:"2024-09-12T09:31:51.000000Z",typesAndCategories:[f,d,c]},{id:574,title:"SugarSketcher",slug:"sugarsketcher",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fsugarsketcher\u002F",documentation_url:a,tutorial_url:a,short_description:"Fast, intuitive, SNFG-compliant glycan structure drawing",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-24T09:20:48.000000Z",updated_at:"2020-07-16T12:21:24.000000Z",typesAndCategories:[o,c]},{id:556,title:"V-pipe",slug:"v-pipe",pinned:V,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002F",documentation_url:"https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F",tutorial_url:"https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fdocumentation\u002F#tutorials",short_description:"Viral genomics pipeline",license_type:{id:t,title:aa,link_url:aB,link_label:aC,created_at:b,updated_at:aD},categories:[{id:g,title:r,icon:k,children:[]},{id:C,title:Q,icon:G,children:[]}],created_at:"2020-06-22T10:05:02.000000Z",updated_at:"2024-09-25T07:35:28.000000Z",typesAndCategories:[g,C,c]},{id:612,title:"Genome History",slug:"genome-history",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FGenomeHistory\u002F",documentation_url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FGenomeHistory\u002FGenomeHistory.html",tutorial_url:a,short_description:"Gene duplicate identification",license_type:a,categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T17:58:34.000000Z",updated_at:"2024-08-15T09:41:20.000000Z",typesAndCategories:[h,c]},{id:681,title:"Computational Linguistics for COVID-19",slug:"computational-linguistics-for-covid-19",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcovid19.nlp.idsia.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"Central hub in computational linguistics for COVID-19",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2020-07-14T07:46:47.000000Z",updated_at:"2024-08-15T14:43:29.000000Z",typesAndCategories:[O,c]},{id:561,title:"TromER",slug:"tromer",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Ftromer\u002F",documentation_url:a,tutorial_url:a,short_description:"Prediction of transcribed regions and splice junctions",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2020-06-22T13:22:48.000000Z",updated_at:"2024-07-31T10:09:15.000000Z",typesAndCategories:[g,p,c]},{id:721,title:"GlyConnect SPARQL endpoint",slug:"glyconnect-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fglyconnect.expasy.org\u002Frdf",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to GlyConnect",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2022-09-16T13:52:39.000000Z",updated_at:"2023-10-10T12:32:47.000000Z",typesAndCategories:[f,o,d]},{id:O,title:"OMA",slug:"oma",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fhome\u002F",documentation_url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fuses\u002F",tutorial_url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Facademy\u002F",short_description:"Orthology inference among complete genomes",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-10-16T12:08:05.000000Z",typesAndCategories:[q,d,c]},{id:670,title:"pROC",slug:"proc",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002FpROC\u002F",documentation_url:a,tutorial_url:a,short_description:"Visualize, smooth and compare ROC curves",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T18:45:50.000000Z",updated_at:"2024-07-18T09:12:14.000000Z",typesAndCategories:[f,c]},{id:736,title:"OMArk",slug:"omark",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fomark.omabrowser.org\u002F",documentation_url:a,tutorial_url:a,short_description:"OMArk determines the quality and completeness of gene sets",license_type:{id:26,title:"the GNU Lesser General Public License v3.0",link_url:"https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Flgpl-3.0.en.html",link_label:"GNU LGPL v3",created_at:aL,updated_at:aL},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2024-03-01T14:01:52.000000Z",updated_at:"2024-10-16T13:14:24.000000Z",typesAndCategories:[f,c]},{id:o,title:"STRING",slug:"string",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fstring-db.org\u002F",documentation_url:"https:\u002F\u002Fstring-db.org\u002Fcgi\u002Fhelp",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=o208DwyFbNk&list=PLjnQS7gxY4Ar6VukbDHp0q0atJAFDWkRX",short_description:"Protein-protein interaction networks and enrichment analysis",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-11-07T13:22:53.000000Z",typesAndCategories:[f,h,d,c]},{id:684,title:"COVTriage",slug:"covidtriage",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcandy.hesge.ch\u002FCOVTriage\u002F",documentation_url:a,tutorial_url:a,short_description:"Rank the COVID-19 literature according to COVoc ontology",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2020-07-22T16:02:32.000000Z",updated_at:"2022-11-03T12:19:39.000000Z",typesAndCategories:[O,c]},{id:606,title:"GlyS3",slug:"glys3",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglyconnect.expasy.org\u002Fglycoql\u002F",documentation_url:a,tutorial_url:a,short_description:"Match a glycan substructure to a database of full structures",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:09:08.000000Z",updated_at:"2024-08-15T14:56:35.000000Z",typesAndCategories:[o,c]},{id:583,title:"QuasR",slug:"quasr",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbioconductor.org\u002Fpackages\u002Frelease\u002Fbioc\u002Fhtml\u002FQuasR.html",documentation_url:a,tutorial_url:a,short_description:"Quantification and analysis of Short Reads",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2020-06-24T10:55:13.000000Z",updated_at:"2023-11-01T14:37:42.000000Z",typesAndCategories:[g,p,c]},{id:726,title:"CAPTAIN",slug:"captain",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.captain-project.net\u002F",documentation_url:a,tutorial_url:a,short_description:"Decision-support tool for conservation area prioritization",license_type:{id:z,title:aM,link_url:aN,link_label:aO,created_at:b,updated_at:aP},categories:[{id:z,title:N,icon:G,children:[]}],created_at:"2023-04-20T07:24:41.000000Z",updated_at:"2024-08-22T15:14:50.000000Z",typesAndCategories:[z,c]},{id:D,title:"OrthoDB",slug:"orthodb",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.orthodb.org\u002F",documentation_url:"https:\u002F\u002Fwww.ezlab.org\u002Forthodb_userguide.html",tutorial_url:a,short_description:"Ortholog evolutionary and functional annotations",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-10-16T11:49:55.000000Z",typesAndCategories:[q,d]},{id:aE,title:"Cellosaurus",slug:"cellosaurus",pinned:V,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.cellosaurus.org\u002F",documentation_url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fdescription.html",tutorial_url:"https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_CLLRS",short_description:"Knowledge resource on cell lines",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-11-11T09:35:48.000000Z",typesAndCategories:[h,d]},{id:702,title:"raxmlGUI",slug:"raxmlgui",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fantonellilab.github.io\u002FraxmlGUI\u002F",documentation_url:"http:\u002F\u002Fdx.doi.org\u002F10.1111\u002F2041-210X.13512",tutorial_url:a,short_description:"raxmlGUI 2.0 is a graphical user interface to RAxML",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2021-01-14T09:44:30.000000Z",updated_at:"2024-08-22T15:36:58.000000Z",typesAndCategories:[q,c]},{id:607,title:"Glynsight",slug:"glynsight",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002F",documentation_url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002Fabout",tutorial_url:a,short_description:"Visualise and compare glycan expression profiles",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:15:21.000000Z",updated_at:"2024-08-16T13:52:43.000000Z",typesAndCategories:[o,c]},{id:634,title:"ProtParam",slug:"protparam",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fprotparam\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fprotparam\u002Fprotparam-doc.html",tutorial_url:a,short_description:"Computation of physico chemical parameters of a protein",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:19:33.000000Z",updated_at:"2024-08-14T13:41:47.000000Z",typesAndCategories:[f,c]},{id:645,title:"GlycoMod",slug:"glycomod",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fglycomod\u002F",documentation_url:a,tutorial_url:a,short_description:"Possible oligosaccharide structures on proteins from masses",license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-30T18:28:43.000000Z",updated_at:"2023-09-28T07:24:17.000000Z",typesAndCategories:[f,o,c]},{id:571,title:"SwissBioIsostere",slug:"swissbioisostere",pinned:e,types:[{id:d,icon:d,title:n}],url:"http:\u002F\u002Fwww.swissbioisostere.ch\u002F",documentation_url:"http:\u002F\u002Fswissbioisostere.ch\u002Fhelp.html",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=0-jqgWoP6hY",short_description:"Database of molecular replacements for ligand design",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:I,title:S,icon:H,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-23T18:10:51.000000Z",updated_at:"2024-10-22T09:27:04.000000Z",typesAndCategories:[f,I,K,d]},{id:f,title:"SWISS-MODEL Repository",slug:"swiss-model-repository",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswissmodel.expasy.org\u002Frepository\u002F",documentation_url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Frepository_help",tutorial_url:a,short_description:"Protein structure homology models",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-10-14T14:16:14.000000Z",typesAndCategories:[f,t,d]},{id:734,title:"GenSpectrum",slug:"genspectrum",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fgenspectrum.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Real-time pathogen genomic sequence analysis",license_type:{id:at,title:au,link_url:av,link_label:aw,created_at:af,updated_at:af},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:z,title:N,icon:G,children:[]}],created_at:"2023-11-20T10:54:32.000000Z",updated_at:"2024-11-25T14:08:43.000000Z",typesAndCategories:[j,z,c]},{id:688,title:"Bgee SPARQL endpoint",slug:"bgee-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.bgee.org\u002Fsparql\u002F",documentation_url:"http:\u002F\u002Fbiosoda.expasy.org\u002Fgenex\u002F",tutorial_url:"https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorial-query-bgee-knowledge-graph-sparql",short_description:"SPARQL access to the Bgee gene expression database",license_type:{id:j,title:ao,link_url:ap,link_label:aq,created_at:b,updated_at:ar},categories:[{id:p,title:A,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:"2020-08-27T12:22:02.000000Z",updated_at:"2024-09-11T11:24:33.000000Z",typesAndCategories:[p,z,d]},{id:663,title:"CT-CBN",slug:"ct-cbn",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbsse.ethz.ch\u002Fcbg\u002Fsoftware\u002Fct-cbn.html",documentation_url:a,tutorial_url:a,short_description:"Estimate conjunctive Bayesian networks",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:"2020-07-01T18:16:11.000000Z",updated_at:"2024-09-13T13:17:19.000000Z",typesAndCategories:[g,z,c]},{id:728,title:"cancercelllines.org",slug:"cancercelllines-org",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fcancercelllines.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Genomic variants in human cancer cell lines",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]},{id:O,title:Z,icon:_,children:[]}],created_at:"2023-05-26T08:17:32.000000Z",updated_at:"2024-05-14T07:13:30.000000Z",typesAndCategories:[j,g,O,d]},{id:611,title:"GlycoDigest",slug:"glycodigest",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycodigest\u002F",documentation_url:a,tutorial_url:a,short_description:"In silico digestion of glycans by exoglycosidases",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:54:21.000000Z",updated_at:"2020-07-16T12:08:34.000000Z",typesAndCategories:[o,c]},{id:730,title:"DWT-online",slug:"dwt-online",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fdwt.scicore.unibas.ch",documentation_url:a,tutorial_url:a,short_description:"Dinucleotide Weight Tensor toolbox and visualisation service",license_type:a,categories:[{id:p,title:A,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-10-03T12:10:48.000000Z",updated_at:"2024-11-06T14:59:52.000000Z",typesAndCategories:[p,h,c]},{id:as,title:"VenomZone",slug:"venom-zone",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fvenomzone.expasy.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Portal to venom protein UniProtKB entries",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:ak,updated_at:"2022-11-25T16:26:58.000000Z",typesAndCategories:[f,d]},{id:566,title:"SwissSidechain",slug:"swisssidechain",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swisssidechain.ch\u002F",documentation_url:"https:\u002F\u002Fwww.swisssidechain.ch\u002Fdata\u002Fhelp_file.pdf",tutorial_url:a,short_description:"Database of non-natural amino acid side chains",license_type:{id:as,title:aF,link_url:aG,link_label:aH,created_at:aI,updated_at:aJ},categories:[{id:f,title:l,icon:m,children:[]},{id:I,title:S,icon:H,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-22T17:17:05.000000Z",updated_at:"2024-10-21T13:53:15.000000Z",typesAndCategories:[f,I,K,d]},{id:q,title:"SwissDock",slug:"swissdock",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.swissdock.ch\u002F",documentation_url:"https:\u002F\u002Fwww.swissdock.ch\u002Fdocumentation.php",tutorial_url:"https:\u002F\u002Fwww.swissdock.ch\u002Ftutorials.php",short_description:"Docking of small ligands into protein active sites",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:I,title:S,icon:H,children:[]}],created_at:ak,updated_at:"2024-10-21T12:50:03.000000Z",typesAndCategories:[f,t,I,c]},{id:701,title:"GAG-DB",slug:"gag-db",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fgagdb.glycopedia.eu\u002F",documentation_url:a,tutorial_url:a,short_description:"3D structures of glycosaminoglycans",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-12-14T10:18:21.000000Z",updated_at:"2024-08-21T13:47:44.000000Z",typesAndCategories:[o,d]},{id:649,title:"Compute pI\u002FMW",slug:"compute-pi-mw",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fcompute_pi\u002F",documentation_url:a,tutorial_url:a,short_description:"Isoelectric point and molecular weight from protein sequence",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T09:48:37.000000Z",updated_at:"2020-10-19T15:31:53.000000Z",typesAndCategories:[f,c]},{id:591,title:"Nextstrain",slug:"nextstrain",pinned:V,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fnextstrain.org\u002F",documentation_url:"https:\u002F\u002Fdocs.nextstrain.org\u002Fen\u002Flatest\u002Findex.html",tutorial_url:"https:\u002F\u002Fdocs.nextstrain.org\u002Fen\u002Flatest\u002Finstall.html",short_description:"Impact of pathogen genome data on science and public health",license_type:{id:at,title:au,link_url:av,link_label:aw,created_at:af,updated_at:af},categories:[{id:g,title:r,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:"2020-06-24T14:31:11.000000Z",updated_at:"2024-10-18T13:44:19.000000Z",typesAndCategories:[g,z,c]},{id:623,title:"BUSCO",slug:"busco",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbusco.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fbusco.ezlab.org\u002Fbusco_userguide.html",tutorial_url:a,short_description:"From QC to gene prediction and phylogenomics",license_type:{id:R,title:aa,link_url:al,link_label:am,created_at:b,updated_at:an},categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:"2020-06-30T15:15:24.000000Z",updated_at:"2024-10-16T08:27:40.000000Z",typesAndCategories:[g,p,z,c]},{id:578,title:"SIBsim4",slug:"sibsim4",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fsourceforge.net\u002Fprojects\u002Fsibsim4\u002F",documentation_url:a,tutorial_url:a,short_description:"Align expressed RNA sequences on a DNA template",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2020-06-24T10:03:12.000000Z",updated_at:"2024-07-18T07:34:40.000000Z",typesAndCategories:[g,p,c]},{id:567,title:"TagScan",slug:"tagscan",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Ftagger\u002Ftagscan.html",documentation_url:a,tutorial_url:a,short_description:"Genome-wide sequence tag scanner",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-23T17:03:28.000000Z",updated_at:"2024-08-15T15:45:15.000000Z",typesAndCategories:[g,c]},{id:694,title:aQ,slug:aQ,pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbioconductor.org\u002Fpackages\u002Frelease\u002Fbioc\u002Fhtml\u002Frawrr.html",documentation_url:"https:\u002F\u002Fpubs.acs.org\u002Fdoi\u002F10.1021\u002Facs.jproteome.0c00866",tutorial_url:a,short_description:"R package for fast reading Thermo Fisher Scientific MS data",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:f,title:l,icon:m,children:[]},{id:B,title:E,icon:s,children:[]}],created_at:"2020-11-12T07:01:35.000000Z",updated_at:"2024-08-22T15:37:48.000000Z",typesAndCategories:[f,B,c]},{id:572,title:"SwissADME",slug:"swissadme",pinned:e,types:[{id:c,icon:c,title:i}],url:"http:\u002F\u002Fwww.swissadme.ch\u002F",documentation_url:"http:\u002F\u002Fwww.swissadme.ch\u002Fhelp.php",tutorial_url:a,short_description:"Pharmacokinetics properties and druglikeness",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:I,title:S,icon:H,children:[]}],created_at:"2020-06-23T18:15:00.000000Z",updated_at:"2024-10-21T14:54:38.000000Z",typesAndCategories:[I,c]},{id:573,title:"Swiss Mass Abacus",slug:"swiss-mass-abacus",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fswiss-mass-abacus\u002F",documentation_url:a,tutorial_url:a,short_description:"Intuitive calculator of peptide and glycopeptide masses",license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-23T18:24:50.000000Z",updated_at:"2020-07-16T12:41:11.000000Z",typesAndCategories:[f,o,c]},{id:700,title:"SIBiLS",slug:"sibils",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fsibils.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Personalized information retrieval from the literature",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2020-12-01T16:16:51.000000Z",updated_at:"2024-11-04T14:25:53.000000Z",typesAndCategories:[O,d,c]},{id:699,title:"SPSP | Swiss Pathogen Surveillance Platform",slug:"spsp",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fspsp.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"A secure NGS One-health online platform",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-12-01T11:25:05.000000Z",updated_at:"2024-02-29T13:29:31.000000Z",typesAndCategories:[j,d,c]},{id:692,title:"UniProt SPARQL endpoint",slug:"uniprot-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.uniprot.org",documentation_url:"https:\u002F\u002Fpurl.uniprot.org\u002Fhtml\u002Findex-en.html#",tutorial_url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fsparql-training\u002Ftree\u002Fmaster\u002Funiprot",short_description:"SPARQL access to UniProt and related data",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-10-27T11:07:43.000000Z",updated_at:"2024-11-11T15:11:26.000000Z",typesAndCategories:[f,d]},{id:666,title:"ISMARA",slug:"ismara",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_ISMARA",short_description:"Webservice for gene expression and epigenetic data analysis",license_type:{id:I,title:"special",link_url:"https:\u002F\u002Fismara.unibas.ch\u002Fmara\u002F#terms",link_label:"Terms of Use",created_at:b,updated_at:"2020-07-02T11:48:19.000000Z"},categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T18:29:43.000000Z",updated_at:"2024-11-11T09:40:14.000000Z",typesAndCategories:[g,p,h,c]},{id:579,title:"ShoRAH",slug:"shorah",pinned:e,types:[{id:c,icon:c,title:i}],url:"http:\u002F\u002Fcbg-ethz.github.io\u002Fshorah\u002F",documentation_url:a,tutorial_url:a,short_description:"Analysis of NGS data",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-24T10:18:17.000000Z",updated_at:"2024-09-13T11:51:18.000000Z",typesAndCategories:[g,c]},{id:735,title:"Protein Universe Atlas",slug:"protein-universe-atlas",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Funiprot3d.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Interactive, annotated similarity network of all proteins",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2024-01-25T14:33:56.000000Z",updated_at:"2024-09-26T16:00:07.000000Z",typesAndCategories:[f,h,d]},{id:580,title:"REALPHY",slug:"realphy",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Frealphy.unibas.ch\u002Frealphy\u002F",documentation_url:"https:\u002F\u002Frealphy.unibas.ch\u002Fdocs\u002FRealphy_manual.pdf",tutorial_url:a,short_description:"Inference of phylogenetic trees from genome data",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-24T10:35:26.000000Z",updated_at:"2024-10-24T13:49:57.000000Z",typesAndCategories:[j,q,c]},{id:722,title:"SwissBioPics",slug:"swissbiopics",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swissbiopics.org\u002F",documentation_url:"https:\u002F\u002Fwww.npmjs.com\u002Fpackage\u002F%40swissprot\u002Fswissbiopics-visualizer",tutorial_url:a,short_description:"Subcellular location visualization",license_type:{id:p,title:ax,link_url:ay,link_label:az,created_at:b,updated_at:aA},categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-10-04T14:50:45.000000Z",updated_at:"2024-08-06T13:29:18.000000Z",typesAndCategories:[h,d]},{id:K,title:"Bgee",slug:"bgee",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.bgee.org\u002F",documentation_url:aR,tutorial_url:aR,short_description:"Gene expression expertise",license_type:{id:j,title:ao,link_url:ap,link_label:aq,created_at:b,updated_at:ar},categories:[{id:p,title:A,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:X,updated_at:"2024-11-11T09:33:41.000000Z",typesAndCategories:[p,z,d,c]},{id:570,title:"SwissParam",slug:"swissparam",pinned:e,types:[{id:c,icon:c,title:i}],url:"http:\u002F\u002Fwww.swissparam.ch\u002F",documentation_url:"http:\u002F\u002Fwww.swissparam.ch\u002FFAQ.php",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=yrf8HzFIpfk",short_description:"Topology and parameters for small molecules",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:I,title:S,icon:H,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-23T18:05:23.000000Z",updated_at:"2024-10-22T09:41:25.000000Z",typesAndCategories:[I,K,c]},{id:609,title:"GlycoSiteAlign",slug:"glycositealign",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycositealign\u002F",documentation_url:a,tutorial_url:a,short_description:"Multiple alignment of sequences around glycosylation sites",license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:29:46.000000Z",updated_at:"2020-07-16T12:22:46.000000Z",typesAndCategories:[f,o,c]},{id:628,title:"Sulfinator",slug:"sulfinator",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002Fsulfinator-doc.html",tutorial_url:a,short_description:"Predict tyrosine sulfation sites in protein sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T16:11:29.000000Z",updated_at:"2024-08-14T13:37:38.000000Z",typesAndCategories:[f,c]},{id:671,title:"ScanProsite",slug:"scanprosite",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002F",documentation_url:"https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002Fscanprosite_doc.html",tutorial_url:a,short_description:"Protein sequences against PROSITE",license_type:{id:aE,title:aa,link_url:aS,link_label:aT,created_at:aU,updated_at:aV},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T18:48:11.000000Z",updated_at:"2024-08-14T13:34:16.000000Z",typesAndCategories:[f,c]},{id:661,title:"TCS",slug:"tcs",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swissregulon.unibas.ch\u002Fcgi-bin\u002FTCS.pl",documentation_url:a,tutorial_url:a,short_description:"Predict interaction specificity in bacterial signalling",license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T11:55:00.000000Z",updated_at:"2024-11-06T16:08:24.000000Z",typesAndCategories:[f,h,d]},{id:707,title:"Glyco@Expasy",slug:"glyco-expasy",pinned:V,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycomics-expasy\u002F",documentation_url:a,tutorial_url:a,short_description:"Zooming in on web-based glycoinformatics resources",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2021-06-07T08:19:20.000000Z",updated_at:"2024-11-21T10:50:24.000000Z",typesAndCategories:[f,o,d]},{id:603,title:"iPtgxDBs",slug:"iptgxdbs",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fiptgxdb.expasy.org",documentation_url:a,tutorial_url:a,short_description:"Platform for integrated proteogenomics databases",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-26T16:30:35.000000Z",updated_at:"2024-08-21T13:34:49.000000Z",typesAndCategories:[j,g,h,d,c]},{id:626,title:"UniProtKB\u002FSwiss-Prot",slug:"uniprotkb-swiss-prot",pinned:V,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.uniprot.org\u002Funiprotkb?facets=reviewed%3Atrue&query=%2A",documentation_url:aW,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=JSQj_Y1xMgo",short_description:"Protein knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T15:41:28.000000Z",updated_at:"2024-11-11T14:11:35.000000Z",typesAndCategories:[f,d]},{id:598,title:"mOTUs",slug:"motus",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmotu-tool.org\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fmotu-tool.org\u002Ftutorial.html",short_description:"Microbial taxonomic and population genomic profiler",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:F,title:P,icon:k,children:[]},{id:C,title:Q,icon:G,children:[]}],created_at:"2020-06-24T19:02:34.000000Z",updated_at:"2024-08-22T15:27:45.000000Z",typesAndCategories:[F,C,c]},{id:639,title:"PeptideCutter",slug:"peptidecutter",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fpeptide_cutter\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fpeptide_cutter\u002Fpeptidecutter_instructions.html",tutorial_url:a,short_description:"Potential cleavage sites in a protein",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:51:00.000000Z",updated_at:"2024-08-14T13:45:06.000000Z",typesAndCategories:[f,c]},{id:717,title:"Nextclade",slug:"nextclade",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fclades.nextstrain.org\u002F",documentation_url:"https:\u002F\u002Fdocs.nextstrain.org\u002Fprojects\u002Fnextclade\u002Fen\u002Fstable\u002F",tutorial_url:a,short_description:"Clade assignment, mutation calling & QC for virus sequences",license_type:{id:R,title:aa,link_url:al,link_label:am,created_at:b,updated_at:an},categories:[{id:g,title:r,icon:k,children:[]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-31T07:39:29.000000Z",updated_at:"2024-10-18T13:45:48.000000Z",typesAndCategories:[g,q,c]},{id:710,title:"Variomes",slug:"variomes",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fvariomes.sibils.org\u002F",documentation_url:"https:\u002F\u002Fvariomes.sibils.org\u002Fapis",tutorial_url:"https:\u002F\u002Fvariomes.sibils.org\u002Ftutorial",short_description:"Search engine to support the curation of genomic variants",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2021-06-28T08:08:30.000000Z",updated_at:"2024-11-04T14:10:28.000000Z",typesAndCategories:[O,c]},{id:j,title:"UniProtKB",slug:"uniprotkb",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.uniprot.org\u002F",documentation_url:aW,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fc\u002Funiprotvideos\u002Ffeatured",short_description:"Protein sequence database",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:X,updated_at:"2024-11-11T12:53:01.000000Z",typesAndCategories:[f,d]},{id:725,title:"CAMEO",slug:"cameo",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.cameo3d.org\u002F",documentation_url:"https:\u002F\u002Fwww.cameo3d.org\u002Fcameong_help\u002F",tutorial_url:a,short_description:"Weekly automated benchmarking of protein structure modelling",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-02-13T09:14:06.000000Z",updated_at:"2024-10-24T09:02:46.000000Z",typesAndCategories:[f,t,d,c]},{id:739,title:"Biodiversity PMC",slug:"biodiversity-pmc",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbiodiversitypmc.sibils.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Search a large collection of scientific publications",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2024-11-04T15:06:25.000000Z",updated_at:"2024-11-04T15:23:40.000000Z",typesAndCategories:[O,c]},{id:560,title:"EPD",slug:"epd",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fepd.expasy.org\u002Fepd",documentation_url:a,tutorial_url:a,short_description:"Eukaryotic Promoter Database",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-22T13:08:46.000000Z",updated_at:"2024-07-18T11:28:24.000000Z",typesAndCategories:[g,d]},{id:575,title:"SugarBind",slug:"sugarbind",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsugarbind.expasy.org",documentation_url:"https:\u002F\u002Fsugarbind.expasy.org\u002Fhelp",tutorial_url:a,short_description:"Pathogen Sugar-Binding Database",license_type:{id:z,title:aM,link_url:aN,link_label:aO,created_at:b,updated_at:aP},categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-24T09:25:27.000000Z",updated_at:"2024-08-15T14:25:38.000000Z",typesAndCategories:[o,d]},{id:655,title:"Click2Drug",slug:"click2drug",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.click2drug.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Directory of computational drug design tools",license_type:{id:as,title:aF,link_url:aG,link_label:aH,created_at:aI,updated_at:aJ},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:R,title:Y,icon:H,children:[]},{id:I,title:S,icon:H,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-07-01T11:03:55.000000Z",updated_at:"2024-10-21T15:12:25.000000Z",typesAndCategories:[f,t,R,I,K,d]},{id:597,title:"MSight",slug:"msight",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmsight.sib.swiss\u002F",documentation_url:a,tutorial_url:a,short_description:"Mass Spectrometry Imager",license_type:a,categories:[{id:B,title:E,icon:s,children:[]}],created_at:"2020-06-24T18:53:32.000000Z",updated_at:"2024-08-22T13:49:13.000000Z",typesAndCategories:[B,c]},{id:576,title:"SSA",slug:"ssa",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Fssa\u002F",documentation_url:a,tutorial_url:a,short_description:"Analysis of nucleic acid sequence motifs",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-24T09:37:25.000000Z",updated_at:"2024-07-31T10:12:26.000000Z",typesAndCategories:[g,c]},{id:729,title:"CREMA",slug:"crema",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcrema.unibas.ch",documentation_url:a,tutorial_url:a,short_description:"Cis-Regulatory Element Motif Activities",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-07-31T07:37:49.000000Z",updated_at:"2024-11-11T09:40:58.000000Z",typesAndCategories:[j,h,c]},{id:589,title:"OpenStructure",slug:"openstructure",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fopenstructure.org\u002F",documentation_url:"https:\u002F\u002Fopenstructure.org\u002Fdocs\u002F",tutorial_url:"https:\u002F\u002Fopenstructure.org\u002Fdocs\u002Fintro\u002F",short_description:"Molecular modelling and visualisation environment",license_type:a,categories:[{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-24T13:01:10.000000Z",updated_at:"2024-10-03T12:32:48.000000Z",typesAndCategories:[K,c]},{id:698,title:"Rhea SPARQL endpoint",slug:"sparql-rhea-db-org",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.rhea-db.org",documentation_url:"https:\u002F\u002Fftp.expasy.org\u002Fdatabases\u002Frhea\u002Frdf\u002Frhea_rdf_documentation.pdf",tutorial_url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fsparql-training\u002Ftree\u002Fmaster\u002Frhea",short_description:"SPARQL access to the Rhea knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]},{id:B,title:E,icon:s,children:[]}],created_at:"2020-11-25T10:00:22.000000Z",updated_at:"2024-11-11T10:42:44.000000Z",typesAndCategories:[f,h,B,d]},{id:559,title:"UniCarb-DB",slug:"unicarb-db",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Funicarb-db.expasy.org",documentation_url:a,tutorial_url:a,short_description:"Glycan structures and associated mass spectrometry data",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-22T12:31:58.000000Z",updated_at:"2023-06-02T08:17:49.000000Z",typesAndCategories:[o,d]},{id:585,title:"Progenetix",slug:"progenetix",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fprogenetix.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Genomic profiles of cancer samples with focus on CNV",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-24T11:08:37.000000Z",updated_at:"2024-08-21T13:00:26.000000Z",typesAndCategories:[j,g,h,d,c]},{id:712,title:"mVIRs",slug:"mvirs",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fgithub.com\u002FSushiLab\u002FmVIRs",documentation_url:a,tutorial_url:a,short_description:"Prediction tool for inducible, bacteria-infecting viruses",license_type:{id:C,title:ab,link_url:ac,link_label:ad,created_at:b,updated_at:ae},categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]},{id:F,title:P,icon:k,children:[]}],created_at:"2022-01-13T09:07:01.000000Z",updated_at:"2024-08-22T15:29:08.000000Z",typesAndCategories:[j,g,F,c]},{id:683,title:"V-pipe SARS-CoV-2",slug:"v-pipe-sars-cov-2",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcbg-ethz.github.io\u002FV-pipe\u002Fsars-cov-2\u002F",documentation_url:"https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002FREADME.md",tutorial_url:"https:\u002F\u002Fgithub.com\u002Fcbg-ethz\u002FV-pipe\u002Fblob\u002Fmaster\u002Fdocs\u002Ftutorial_sarscov2.md",short_description:"V-pipe pipeline for SARS-CoV-2 sequencing data",license_type:{id:t,title:aa,link_url:aB,link_label:aC,created_at:b,updated_at:aD},categories:[{id:g,title:r,icon:k,children:[]},{id:C,title:Q,icon:G,children:[]}],created_at:"2020-07-14T08:10:17.000000Z",updated_at:"2024-09-13T11:27:52.000000Z",typesAndCategories:[g,C,c]},{id:602,title:"IScan",slug:"iscan",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.ieu.uzh.ch\u002Fwagner\u002Fsoftware\u002FIScan\u002Findex.html",documentation_url:a,tutorial_url:a,short_description:"Insertion sequence identification in whole genomes",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-26T16:18:37.000000Z",updated_at:"2022-10-05T12:03:38.000000Z",typesAndCategories:[g,c]},{id:630,title:"Rhea",slug:"rhea",pinned:V,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.rhea-db.org\u002F",documentation_url:"https:\u002F\u002Fwww.rhea-db.org\u002Fhelp",tutorial_url:"https:\u002F\u002Fwww.rhea-db.org\u002Fhelp\u002Fsearching-rhea",short_description:"Expert-curated database of biochemical reactions",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]},{id:B,title:E,icon:s,children:[]}],created_at:"2020-06-30T16:31:34.000000Z",updated_at:"2024-11-08T08:39:50.000000Z",typesAndCategories:[f,h,B,d]},{id:R,title:"ViralZone",slug:"viralzone",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fviralzone.expasy.org\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2023_VRLZN",short_description:"Fact sheets about viruses linked to sequence databases",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:X,updated_at:"2024-08-21T12:47:48.000000Z",typesAndCategories:[j,f,t,d]},{id:724,title:"ModelArchive",slug:"modelarchive",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fmodelarchive.org\u002F",documentation_url:"https:\u002F\u002Fmodelarchive.org\u002Fhelp",tutorial_url:a,short_description:"Repository of predicted macromolecular structure models",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-02-13T09:09:24.000000Z",updated_at:"2024-09-26T15:01:41.000000Z",typesAndCategories:[t,d]},{id:577,title:"SNP2TFBS",slug:"snp2tfbs",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Fsnp2tfbs\u002F",documentation_url:a,tutorial_url:a,short_description:"Regulatory SNPs affecting TF binding site affinity",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-24T09:46:33.000000Z",updated_at:"2024-07-31T10:13:41.000000Z",typesAndCategories:[g,d,c]},{id:716,title:"Swiss-Trees",slug:"swiss-trees",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswisstree.sib.swiss\u002Fcgi-bin\u002Fswisst",documentation_url:a,tutorial_url:a,short_description:"A collection of gold standard gene phylogenies",license_type:a,categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T13:15:34.000000Z",updated_at:"2024-10-16T14:05:39.000000Z",typesAndCategories:[q,d]},{id:705,title:"HMO-Glycologue",slug:"hmo-glycologue",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycologue.org\u002Fm\u002F",documentation_url:a,tutorial_url:a,short_description:"Simulator of Human Milk Oligosaccharide synthesis",license_type:a,categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]},{id:o,title:u,icon:s,children:[]}],created_at:"2021-01-21T19:03:24.000000Z",updated_at:"2024-08-21T13:51:01.000000Z",typesAndCategories:[h,o,c]},{id:676,title:"SWISS-MODEL",slug:"swiss-model",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:aX,documentation_url:aY,tutorial_url:aZ,short_description:"Protein structure homology-modelling",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-06T07:25:23.000000Z",updated_at:"2024-10-03T12:25:35.000000Z",typesAndCategories:[f,t,d,c]},{id:654,title:"ChIP-Seq",slug:"chip-seq",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fepd.expasy.org\u002Fchipseq\u002F",documentation_url:a,tutorial_url:a,short_description:"ChIP-Seq data analysis tools",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-07-01T10:54:53.000000Z",updated_at:"2024-07-31T10:16:47.000000Z",typesAndCategories:[g,c]},{id:605,title:"MELANIE",slug:"melanie",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002F2d-gel-analysis.com",documentation_url:a,tutorial_url:a,short_description:"2-D PAGE analysis",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-26T16:47:04.000000Z",updated_at:"2024-07-23T09:26:49.000000Z",typesAndCategories:[f,c]},{id:558,title:"UniLectin",slug:"unilectin",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Funilectin.unige.ch\u002F",documentation_url:"https:\u002F\u002Funilectin.unige.ch\u002Fpages\u002Fabout",tutorial_url:a,short_description:"Structural and functional classification of lectins",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-22T12:10:25.000000Z",updated_at:"2024-11-26T12:17:59.000000Z",typesAndCategories:[f,o,d]},{id:664,title:"ISA",slug:"isa",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ISA",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ISA#Tutorials",short_description:"Finding modules in gene expression data",license_type:a,categories:[{id:p,title:A,icon:k,children:[]}],created_at:"2020-07-01T18:20:43.000000Z",updated_at:"2024-08-21T13:10:22.000000Z",typesAndCategories:[p,c]},{id:687,title:"OMA SPARQL endpoint",slug:"oma-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.omabrowser.org\u002Flode\u002Fsparql",documentation_url:"https:\u002F\u002Fqfo.github.io\u002FOrthologyOntology\u002F",tutorial_url:a,short_description:"SPARQL access to the OMA Orthology database",license_type:{id:22,title:"a Creative Commons Attribution-ShareAlike 2.5 Generic license",link_url:"https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-sa\u002F2.5\u002F",link_label:"CC BY-SA 2.5",created_at:"2020-08-27T12:12:58.000000Z",updated_at:"2022-04-14T10:29:53.000000Z"},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-08-27T12:09:07.000000Z",updated_at:"2024-10-16T12:22:08.000000Z",typesAndCategories:[q,d]},{id:563,title:"SwissTargetPrediction",slug:"swisstargetprediction",pinned:e,types:[{id:c,icon:c,title:i}],url:"http:\u002F\u002Fwww.swisstargetprediction.ch\u002F",documentation_url:"http:\u002F\u002Fwww.swisstargetprediction.ch\u002Fhelp.php",tutorial_url:a,short_description:"Target prediction for bioactive small molecules",license_type:{id:as,title:aF,link_url:aG,link_label:aH,created_at:aI,updated_at:aJ},categories:[{id:f,title:l,icon:m,children:[]},{id:I,title:S,icon:H,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-22T13:38:35.000000Z",updated_at:"2024-10-21T14:22:58.000000Z",typesAndCategories:[f,I,K,c]},{id:738,title:"BiotXplorer",slug:"biotxplorer",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbiotxplorer.sibils.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Biotic interactions from scientific publications",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2024-11-04T14:33:59.000000Z",updated_at:"2024-11-04T14:50:26.000000Z",typesAndCategories:[O,c]},{id:629,title:"SIM",slug:"sim",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fsim\u002F",documentation_url:a,tutorial_url:a,short_description:"Alignment of two protein sequences or within a sequence",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T16:24:17.000000Z",updated_at:"2024-08-21T13:05:31.000000Z",typesAndCategories:[f,c]},{id:714,title:"OMAMO",slug:"omamo",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fomabrowser.org\u002Foma\u002Fomamo\u002F",documentation_url:"https:\u002F\u002Fdoi.org\u002F10.1093\u002Fbioinformatics\u002Fbtac163",tutorial_url:a,short_description:"OMAMO allows the user to find the best simple model organism",license_type:a,categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T07:35:13.000000Z",updated_at:"2024-10-16T13:39:01.000000Z",typesAndCategories:[h,c]},{id:588,title:"PACMAN",slug:"pacman",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbugfri.unibe.ch\u002Fpacman\u002F",documentation_url:a,tutorial_url:a,short_description:"Publication quality images of DNA locations",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-06-24T11:29:27.000000Z",updated_at:"2024-07-16T15:35:14.000000Z",typesAndCategories:[g,c]},{id:731,title:"Cellosaurus SPARQL endpoint",slug:"cellosaurus-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fquery.wikidata.org\u002F",documentation_url:a,tutorial_url:a,short_description:"SPARQL access to Cellosaurus via Wikidata",license_type:{id:j,title:ao,link_url:ap,link_label:aq,created_at:b,updated_at:ar},categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2023-10-10T11:55:39.000000Z",updated_at:"2024-08-28T13:33:42.000000Z",typesAndCategories:[h,d]},{id:646,title:"FindPept",slug:"findpept",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002Ffindpept-doc.html",tutorial_url:a,short_description:"Unspecific protein cleavage from experimental masses",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T18:33:26.000000Z",updated_at:"2024-08-14T13:49:43.000000Z",typesAndCategories:[f,c]},{id:638,title:"PeptideMass",slug:"peptidemass",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002Fpeptide-mass-doc.html",tutorial_url:a,short_description:"Theoretical protein cleavage by a given enzyme",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:44:47.000000Z",updated_at:"2024-08-14T13:43:44.000000Z",typesAndCategories:[f,c]},{id:642,title:"MALDIPepQuant",slug:"maldipepquant",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fmaldipepquant\u002Fhelp\u002F",tutorial_url:a,short_description:"Quantify MALDI peptides from Phenyx output",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T18:01:54.000000Z",updated_at:"2024-08-14T13:48:15.000000Z",typesAndCategories:[f,c]},{id:610,title:"GlyConnect",slug:"glyconnect",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fglyconnect.expasy.org",documentation_url:"https:\u002F\u002Fglyconnect.expasy.org\u002Fhelp",tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=L9Zn-ji4RYY&t=2619s",short_description:"Integrated data platform to study glycosylation",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T17:50:15.000000Z",updated_at:"2024-11-26T12:11:27.000000Z",typesAndCategories:[f,o,d]},{id:715,title:"Phylo.io",slug:"phylo-io",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fphylo.io\u002F",documentation_url:"http:\u002F\u002Fphylo.io\u002Fmanual.html",tutorial_url:a,short_description:"A tool for visualising and comparing phylogenetic trees",license_type:{id:R,title:aa,link_url:al,link_label:am,created_at:b,updated_at:an},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2022-03-30T13:05:40.000000Z",updated_at:"2024-10-16T14:16:48.000000Z",typesAndCategories:[q,c]},{id:685,title:"TASmania",slug:"tasmania",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fshiny.bioinformatics.unibe.ch\u002Fapps\u002Ftasmania\u002F",documentation_url:a,tutorial_url:a,short_description:"Toxin-antitoxin database",license_type:a,categories:[{id:g,title:r,icon:k,children:[]}],created_at:"2020-07-24T12:39:30.000000Z",updated_at:"2024-08-15T09:42:59.000000Z",typesAndCategories:[g,d]},{id:617,title:"EpitopeXtractor",slug:"epitopextractor",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglycoproteome.expasy.org\u002Fepextractor\u002F",documentation_url:a,tutorial_url:a,short_description:"Compare glycan structures to Glydin' network's collection",license_type:a,categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2020-06-26T18:32:16.000000Z",updated_at:"2024-07-18T13:53:15.000000Z",typesAndCategories:[o,c]},{id:674,title:"SwissDrugDesign",slug:"swissdrugdesign",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.molecular-modelling.ch\u002Fswiss-drug-design.html",documentation_url:a,tutorial_url:a,short_description:"Widening access to computer-aided drug design",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:R,title:Y,icon:H,children:[]},{id:I,title:S,icon:H,children:[]}],created_at:"2020-07-06T07:14:50.000000Z",updated_at:"2024-10-21T15:13:10.000000Z",typesAndCategories:[R,I,d,c]},{id:587,title:"PaxDb",slug:"paxdb",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fpax-db.org\u002F",documentation_url:"https:\u002F\u002Fpax-db.org\u002Fhelp",tutorial_url:a,short_description:"Protein abundance across several organisms",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-24T11:24:07.000000Z",updated_at:"2024-11-07T13:08:46.000000Z",typesAndCategories:[f,d,c]},{id:648,title:"Decrease redundancy",slug:"decrease-redundancy",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fdecrease_redundancy\u002F",documentation_url:a,tutorial_url:a,short_description:"Redundancy reduction in a set of sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T09:41:48.000000Z",updated_at:"2024-08-21T13:08:00.000000Z",typesAndCategories:[f,c]},{id:557,title:"Arlequin",slug:"arlequin",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcmpg.unibe.ch\u002Fsoftware\u002Farlequin35\u002F",documentation_url:a,tutorial_url:a,short_description:"An integrated software for population genetics data analysis",license_type:a,categories:[{id:C,title:Q,icon:G,children:[]}],created_at:"2020-06-22T10:05:21.000000Z",updated_at:"2024-08-21T13:32:18.000000Z",typesAndCategories:[C,c]},{id:651,title:"UniProt BLAST",slug:"uniprot-blast",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.uniprot.org\u002Fblast\u002F",documentation_url:a,tutorial_url:a,short_description:"BLAST sequence similarity search on the UniProt web site",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T09:59:06.000000Z",updated_at:"2020-07-16T11:38:53.000000Z",typesAndCategories:[f,c]},{id:p,title:"PROSITE",slug:"prosite",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fprosite.expasy.org\u002F",documentation_url:"https:\u002F\u002Fprosite.expasy.org\u002Fprosuser.html",tutorial_url:a,short_description:"Protein family and domain database",license_type:{id:aE,title:aa,link_url:aS,link_label:aT,created_at:aU,updated_at:aV},categories:[{id:f,title:l,icon:m,children:[]}],created_at:X,updated_at:"2024-08-21T12:51:53.000000Z",typesAndCategories:[f,d]},{id:673,title:"SwissOrthology",slug:"swissorthology",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fswissorthology.ch\u002Fservice\u002Fsearch",documentation_url:a,tutorial_url:"https:\u002F\u002Fswissorthology.ch\u002Fservice\u002Fguide",short_description:"One-stop shop for orthologs",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-02T13:44:05.000000Z",updated_at:"2024-11-11T09:38:06.000000Z",typesAndCategories:[j,q,d,c]},{id:719,title:"SwissLipids SPARQL endpoint",slug:"swisslipids-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fbeta.sparql.swisslipids.org\u002F",documentation_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=9S-A4gBz8Cg",tutorial_url:a,short_description:"SPARQL access to the SwissLipids knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:D,title:J,icon:s,children:[]}],created_at:"2022-09-16T09:38:49.000000Z",updated_at:"2024-11-11T10:43:50.000000Z",typesAndCategories:[f,D,d]},{id:659,title:"CLASTR",slug:"str-similarity-search-tool",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fstr-search\u002F",documentation_url:"https:\u002F\u002Fwww.cellosaurus.org\u002Fstr-search\u002Fhelp.html",tutorial_url:a,short_description:"Cellosaurus STR similarity search tool",license_type:a,categories:[{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T11:31:48.000000Z",updated_at:"2024-11-11T09:36:45.000000Z",typesAndCategories:[h,c]},{id:675,title:"SwissRegulon Portal",slug:"swissregulon-portal",pinned:V,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fpages\u002F",documentation_url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fpages\u002Fdocumentation",tutorial_url:a,short_description:"Tools and data for regulatory genomics",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-06T07:19:42.000000Z",updated_at:"2024-10-24T09:36:05.000000Z",typesAndCategories:[j,g,p,q,h,d,c]},{id:703,title:"MzJava",slug:"mzjava",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmzjava.expasy.org\u002F",documentation_url:a,tutorial_url:a,short_description:"Open source Java class library to process MS fragmentation",license_type:{id:t,title:aa,link_url:aB,link_label:aC,created_at:b,updated_at:aD},categories:[{id:f,title:l,icon:m,children:[]},{id:o,title:u,icon:s,children:[]}],created_at:"2021-01-21T13:54:00.000000Z",updated_at:"2024-08-22T12:12:27.000000Z",typesAndCategories:[f,o,c]},{id:18,title:"SwissLipids",slug:"swisslipids",pinned:V,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.swisslipids.org\u002F#\u002F",documentation_url:a,tutorial_url:a,short_description:"Knowledge resource for lipids",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]},{id:D,title:J,icon:s,children:[]}],created_at:ak,updated_at:"2024-11-08T13:34:17.000000Z",typesAndCategories:[f,D,d]},{id:614,title:a_,slug:a_,pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fcmpg.unibe.ch\u002Fsoftware\u002Ffastsimcoal2\u002F",documentation_url:a,tutorial_url:a,short_description:"Fast sequential Markov coalescent simulation of genomic data",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:z,title:N,icon:G,children:[]},{id:C,title:Q,icon:G,children:[]}],created_at:"2020-06-26T18:18:13.000000Z",updated_at:"2024-08-22T15:16:17.000000Z",typesAndCategories:[g,z,C,c]},{id:660,title:"SWISS-MODEL Workspace",slug:"swiss-model-workspace",pinned:e,types:[{id:c,icon:c,title:i}],url:aX,documentation_url:aY,tutorial_url:aZ,short_description:"Fully automated protein structure homology-modeling server",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:f,title:l,icon:m,children:[]},{id:t,title:$,icon:H,children:[{id:R,title:Y,parent_id:t,icon:a,created_at:b,updated_at:b},{id:I,title:S,parent_id:t,icon:a,created_at:b,updated_at:b},{id:K,title:T,parent_id:t,icon:a,created_at:b,updated_at:b}]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-07-01T11:43:42.000000Z",updated_at:"2024-09-26T12:59:32.000000Z",typesAndCategories:[f,t,K,c]},{id:599,title:"miRmap",slug:"mirmap",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmirmap.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fmirmap.ezlab.org\u002F#documentation",tutorial_url:"https:\u002F\u002Fmirmap.ezlab.org\u002Fstatic\u002Fhelp\u002Findex.html",short_description:"Prediction of microRNA target repression strength",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2020-06-26T15:50:25.000000Z",updated_at:"2024-10-16T09:14:09.000000Z",typesAndCategories:[g,p,c]},{id:568,title:"SwissRegulon",slug:"swissregulon",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fswissregulon.unibas.ch\u002Fsr\u002Fswissregulon",documentation_url:a,tutorial_url:a,short_description:"Database of genome-wide annotations of regulatory sites",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-23T17:12:32.000000Z",updated_at:"2024-11-06T15:14:19.000000Z",typesAndCategories:[g,p,h,d]},{id:658,title:"Dotlet",slug:"dotlet",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fdotlet",documentation_url:a,tutorial_url:a,short_description:"Regions of close similarity in 2 sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T11:17:43.000000Z",updated_at:"2024-08-21T13:43:42.000000Z",typesAndCategories:[f,c]},{id:h,title:"neXtProt",slug:"nextprot",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fwww.nextprot.org\u002F",documentation_url:"https:\u002F\u002Fwww.nextprot.org\u002Fhelp\u002F",tutorial_url:"https:\u002F\u002Fwww.sib.swiss\u002Ftraining\u002Fcourse\u002F2022_NXPRT",short_description:"Human protein knowledgebase",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:f,title:l,icon:m,children:[]}],created_at:X,updated_at:"2024-10-08T11:21:48.000000Z",typesAndCategories:[f,d]},{id:680,title:"BEAST2 - COVID-19 Monitoring",slug:"beast2-covid-19-monitoring",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fbsse.ethz.ch\u002Fcevo\u002Fresearch\u002Fsars-cov-2.html",documentation_url:a,tutorial_url:a,short_description:"Epidemiological dynamics in real-time",license_type:a,categories:[{id:j,title:U,icon:k,children:[{id:g,title:r,parent_id:j,icon:a,created_at:b,updated_at:b},{id:F,title:P,parent_id:j,icon:a,created_at:b,updated_at:b},{id:p,title:A,parent_id:j,icon:a,created_at:b,updated_at:b}]},{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-14T07:33:02.000000Z",updated_at:"2023-11-20T10:32:57.000000Z",typesAndCategories:[j,q,c]},{id:564,title:"SwissSimilarity",slug:"swisssimilarity",pinned:e,types:[{id:c,icon:c,title:i}],url:"http:\u002F\u002Fwww.swisssimilarity.ch\u002F",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=4VV7_QgCzgs",short_description:"Ligand-based virtual screening",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:I,title:S,icon:H,children:[]}],created_at:"2020-06-22T16:58:01.000000Z",updated_at:"2024-10-21T14:39:11.000000Z",typesAndCategories:[I,c]},{id:669,title:"Phylogibbs",slug:"phylogibbs",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.phylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl",documentation_url:"https:\u002F\u002Fphylogibbs.unibas.ch\u002Fcgi-bin\u002Fphylogibbs.pl?part=documentation&page=phylogibbs",tutorial_url:a,short_description:"Regulatory sites in a collection of DNA sequences",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-07-01T18:43:30.000000Z",updated_at:"2024-10-24T14:12:47.000000Z",typesAndCategories:[g,h,c]},{id:586,title:a$,slug:a$,pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fpftools3",documentation_url:a,tutorial_url:a,short_description:"Build, calibrate, and search biological sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-24T11:18:41.000000Z",updated_at:"2024-07-18T07:35:49.000000Z",typesAndCategories:[f,c]},{id:631,title:"RandSeq",slug:"randseq",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Frandseq\u002F",documentation_url:a,tutorial_url:a,short_description:"Random protein sequence generator",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T16:46:44.000000Z",updated_at:"2024-08-21T13:06:49.000000Z",typesAndCategories:[f,c]},{id:584,title:"QMEAN",slug:"qmean",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fqmean\u002F",documentation_url:"https:\u002F\u002Fswissmodel.expasy.org\u002Fqmean\u002Fhelp",tutorial_url:a,short_description:"Protein model quality estimation",license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:K,title:T,icon:H,children:[]}],created_at:"2020-06-24T11:03:18.000000Z",updated_at:"2024-10-03T12:33:50.000000Z",typesAndCategories:[f,K,c]},{id:690,title:"LEMMI",slug:"lemmi",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww.ezlab.org\u002Flemmi.html",documentation_url:a,tutorial_url:a,short_description:"Continuous benchmarking of methods for metagenomics",license_type:a,categories:[{id:F,title:P,icon:k,children:[]}],created_at:"2020-08-31T09:54:20.000000Z",updated_at:"2024-10-16T08:44:34.000000Z",typesAndCategories:[F,c]},{id:737,title:"SIBiLS SPARQL endpoint",slug:"sibils-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.sibils.org\u002F",documentation_url:"https:\u002F\u002Fsibils.org\u002Fapi\u002Fsparql\u002Fsibils-ontology.html",tutorial_url:a,short_description:"SPARQL access to SIBiLS, the SIB Literature Services",license_type:a,categories:[{id:O,title:Z,icon:_,children:[]}],created_at:"2024-07-09T05:43:53.000000Z",updated_at:"2024-11-05T10:28:11.000000Z",typesAndCategories:[O,d]},{id:704,title:"GlyConnect Compozitor",slug:"glyconnect-compozitor",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fglyconnect.expasy.org\u002Fcompozitor\u002F",documentation_url:a,tutorial_url:a,short_description:"Contextualises glycan composition sets",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:o,title:u,icon:s,children:[]}],created_at:"2021-01-21T18:53:58.000000Z",updated_at:"2023-03-27T07:18:38.000000Z",typesAndCategories:[o,c]},{id:691,title:"HAMAP SPARQL endpoint",slug:"hamap-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fhamap.expasy.org\u002Fsparql",documentation_url:"https:\u002F\u002Facademic.oup.com\u002Fgigascience\u002Farticle\u002F9\u002F2\u002Fgiaa003\u002F5731417",tutorial_url:a,short_description:"SPARQL access to the HAMAP annotation rules",license_type:{id:p,title:ax,link_url:ay,link_label:az,created_at:b,updated_at:aA},categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-10-27T11:03:40.000000Z",updated_at:"2024-07-23T09:55:54.000000Z",typesAndCategories:[f,d]},{id:613,title:"FetchGWI \u002F tagger",slug:"fetchgwi-tagger",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fsourceforge.net\u002Fprojects\u002Ftagger\u002F",documentation_url:a,tutorial_url:a,short_description:"Short sequence mapping",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]}],created_at:"2020-06-26T18:08:10.000000Z",updated_at:"2024-08-22T15:19:17.000000Z",typesAndCategories:[g,p,c]},{id:647,title:"FindMod",slug:"findmod",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002Ffindmod-doc.html",tutorial_url:a,short_description:"Potential PTMs and single amino acid substitutions",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-07-01T09:34:57.000000Z",updated_at:"2024-08-14T13:50:47.000000Z",typesAndCategories:[f,c]},{id:665,title:"ExpressionView",slug:"expressionview",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ExpressionView",documentation_url:a,tutorial_url:"https:\u002F\u002Fwww2.unil.ch\u002Fcbg\u002Findex.php?title=ExpressionView#Tutorials",short_description:"Biclusters identified in gene expression data",license_type:a,categories:[{id:p,title:A,icon:k,children:[]}],created_at:"2020-07-01T18:24:34.000000Z",updated_at:"2024-08-16T13:46:19.000000Z",typesAndCategories:[p,c]},{id:697,title:"PolyAsite",slug:"polyasite",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fpolyasite.unibas.ch\u002F",documentation_url:a,tutorial_url:a,short_description:"Database of curated RNA polyadenylation sites",license_type:a,categories:[{id:p,title:A,icon:k,children:[]}],created_at:"2020-11-18T12:34:41.000000Z",updated_at:"2024-09-12T09:36:56.000000Z",typesAndCategories:[p,d]},{id:F,title:"Selectome",slug:"selectome",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fselectome.org\u002F",documentation_url:"https:\u002F\u002Fselectome.org\u002Feuteleostomi\u002Fguide",tutorial_url:a,short_description:"Database of positive selection",license_type:{id:j,title:ao,link_url:ap,link_label:aq,created_at:b,updated_at:ar},categories:[{id:g,title:r,icon:k,children:[]},{id:z,title:N,icon:G,children:[]}],created_at:X,updated_at:"2024-11-11T09:33:10.000000Z",typesAndCategories:[g,z,d]},{id:693,title:"OrthoLoger",slug:"orthologer",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Forthologer.ezlab.org\u002F",documentation_url:"https:\u002F\u002Fwww.orthodb.org\u002Forthodb_userguide.html#standalone-orthologer-software",tutorial_url:a,short_description:"Accurate and scalable inference of groups of orthologs",license_type:a,categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-10-29T07:59:19.000000Z",updated_at:"2024-10-16T11:57:29.000000Z",typesAndCategories:[q,c]},{id:632,title:"ProtScale",slug:"protscale",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fprotscale\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fprotscale\u002Fprotscale-doc.html",tutorial_url:a,short_description:"Profile produced by amino acids scales on protein sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T16:56:00.000000Z",updated_at:"2024-08-14T13:40:18.000000Z",typesAndCategories:[f,c]},{id:723,title:ba,slug:"mhc-motif-atlas",pinned:e,types:[{id:d,icon:d,title:n}],url:"http:\u002F\u002Fmhcmotifatlas.org\u002Fhome",documentation_url:a,tutorial_url:a,short_description:ba,license_type:a,categories:[{id:f,title:l,icon:m,children:[]},{id:O,title:Z,icon:_,children:[]}],created_at:"2022-11-22T15:50:43.000000Z",updated_at:"2024-08-26T09:44:36.000000Z",typesAndCategories:[f,O,d]},{id:593,title:"arrayMAP",slug:"arraymap",pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:i}],url:"https:\u002F\u002Fprogenetix.org\u002Fprogenetix-cohorts\u002Farraymap\u002F",documentation_url:a,tutorial_url:a,short_description:"Curated array data repository for cancer genomics",license_type:{id:F,title:ag,link_url:ah,link_label:ai,created_at:b,updated_at:aj},categories:[{id:g,title:r,icon:k,children:[]},{id:h,title:L,icon:s,children:[{id:o,title:u,parent_id:h,icon:a,created_at:b,updated_at:b},{id:D,title:J,parent_id:h,icon:a,created_at:b,updated_at:M},{id:B,title:E,parent_id:h,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-06-24T18:26:29.000000Z",updated_at:"2024-08-22T15:12:03.000000Z",typesAndCategories:[g,h,d,c]},{id:689,title:"OrthoDB SPARQL endpoint",slug:"orthodb-sparql-endpoint",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fsparql.orthodb.org\u002F",documentation_url:"https:\u002F\u002Fsparql.orthodb.org\u002Fwidoco\u002Findex-en.html",tutorial_url:a,short_description:"SPARQL access to the OrthoDB catalog of orthologs",license_type:{id:g,title:v,link_url:w,link_label:x,created_at:b,updated_at:y},categories:[{id:q,title:W,icon:G,children:[{id:z,title:N,parent_id:q,icon:a,created_at:b,updated_at:b},{id:C,title:Q,parent_id:q,icon:a,created_at:b,updated_at:b}]}],created_at:"2020-08-31T09:49:24.000000Z",updated_at:"2024-10-14T14:59:34.000000Z",typesAndCategories:[q,d]},{id:636,title:"PRATT",slug:"pratt",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002F",documentation_url:"https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002Fpratt_doc.html",tutorial_url:a,short_description:"Conserved patterns in a set of protein sequences",license_type:a,categories:[{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:24:54.000000Z",updated_at:"2024-08-14T13:42:48.000000Z",typesAndCategories:[f,c]},{id:633,title:"ABCD",slug:"abcd",pinned:e,types:[{id:d,icon:d,title:n}],url:"https:\u002F\u002Fweb.expasy.org\u002Fabcd\u002F",documentation_url:a,tutorial_url:a,short_description:"Database of chemically defined antibodies",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T17:01:34.000000Z",updated_at:"2024-07-31T09:58:16.000000Z",typesAndCategories:[g,f,d]},{id:627,title:"Translate",slug:"translate",pinned:e,types:[{id:c,icon:c,title:i}],url:"https:\u002F\u002Fweb.expasy.org\u002Ftranslate\u002F",documentation_url:a,tutorial_url:a,short_description:"Nucleotide sequence to a protein sequence",license_type:a,categories:[{id:g,title:r,icon:k,children:[]},{id:p,title:A,icon:k,children:[]},{id:f,title:l,icon:m,children:[]}],created_at:"2020-06-30T15:54:51.000000Z",updated_at:"2024-08-21T13:11:55.000000Z",typesAndCategories:[g,p,f,c]}]},search:{error:""}},serverRendered:V,routePath:"\u002Fsearch\u002FData%20visualisation",config:{_app:{basePath:"\u002F",assetsPath:"\u002F_nuxt\u002F",cdnURL:a}}}}(null,"2020-06-10T10:24:16.000000Z","tool","db",false,5,2,13,"Software tool",1,"gene","Proteins & Proteomes","protein","Database",14,4,6,"Genomics","sys-biology",9,"Glycomics","a Creative Commons Attribution International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby\u002F4.0\u002F","CC BY 4.0","2022-04-14T10:32:25.000000Z",7,"Transcriptomics",16,8,15,"Metabolomics",3,"evolution","stru-biology",11,"Lipidomics",12,"Systems Biology","2020-06-10T11:03:54.000000Z","Evolution biology",17,"Metagenomics","Population genetics",10,"Medicinal chemistry","Structural analysis","Genes & Genomes",true,"Evolution & Phylogeny","2020-06-18T13:59:48.000000Z","Drug design","Text mining & Machine learning","text-mining","Structural Biology","the","the GNU General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fgpl-3.0.en.html","GPL 3","2020-07-16T10:56:27.000000Z","2023-03-23T09:28:20.000000Z","a Creative Commons Attribution-ShareAlike International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-sa\u002F4.0\u002F","CC BY-SA 4.0","2022-04-14T10:32:09.000000Z","2020-06-18T13:59:49.000000Z","https:\u002F\u002Fopensource.org\u002Flicenses\u002FMIT","MIT License","2020-06-23T16:41:42.000000Z","a Creative Commons Universal license","https:\u002F\u002Fcreativecommons.org\u002Fpublicdomain\u002Fzero\u002F1.0\u002F","CC0","2022-04-14T10:32:34.000000Z",20,25,"the GNU Affero General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fagpl-3.0.en.html","GNU AGPL","a Creative Commons Attribution-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nd\u002F4.0\u002F","CC BY-ND 4.0","2022-04-14T10:31:45.000000Z","https:\u002F\u002Fwww.apache.org\u002Flicenses\u002FLICENSE-2.0","Apache License","2020-06-23T16:41:00.000000Z",21,"a free license for academic use. A licence is required for private companies.","http:\u002F\u002Fwww.swissdock.ch\u002Fpages\u002Ffeedback","Contact the team","2020-07-16T11:12:03.000000Z","2022-04-14T10:30:15.000000Z","https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fhelp","2024-03-01T14:11:56.000000Z","a Creative Commons Attribution-NonCommercial-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nc-nd\u002F4.0\u002F","CC BY-NC-ND 4.0","2022-04-14T10:31:12.000000Z","rawrr","https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorials","https:\u002F\u002Fprosite.expasy.org\u002Fprosite_license.html","PROSITE license","2020-07-16T11:36:48.000000Z","2022-04-14T10:30:04.000000Z","https:\u002F\u002Fwww.uniprot.org\u002Fhelp\u002Ftechnical","https:\u002F\u002Fswissmodel.expasy.org\u002F","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Fhelp","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Ftutorial","fastsimcoal","pftools","MHC Motif Atlas"));</script><script src="/_nuxt/734f39f.js" defer></script><script src="/_nuxt/a27e3d3.js" defer></script><script src="/_nuxt/78684c8.js" defer></script><script src="/_nuxt/e4f4568.js" defer></script><script src="/_nuxt/73b71d2.js" defer></script> </body> </html>

Pages: 1 2 3 4 5 6 7 8 9 10