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uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi8XLofDFLYP2H1jLLnrd8jHQmWPbo3cgkhwjFPrtRbqhO7ugVJsmEnYJBkUlsg59fqRKGvFIaq7xZNjbQ86Q_1tgKe8Wp1cuTPSC7pEUUAPiMkZ3bFSTt8lAglc81P1Qdiv0DNPj0cmKA0/s1600/Global_25_graphic_small.png' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='2548506783201613945' itemprop='postId'/> <a name='2548506783201613945'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2021/08/genetic-ancestry-online-store.html'>Genetic ancestry online store (closed until further notice)</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-2548506783201613945' itemprop='description articleBody'> </br><b>Please note that the store is closed until further notice.</b> Thank you for your continued support.</br></br> ...</br></br> </br>Following a rigorous testing phase, the awesome Global 25 analysis is now available at the store for $12 USD. What's so awesome about this test, you might ask? See <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">here</a> and <a href="https://bga101.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">here</a>.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://drive.google.com/file/d/1k6z0j1Rt0zSHwQqpJ2OO_xcxX9UX0Zbz/view?usp=sharing" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="383" data-original-width="300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi8XLofDFLYP2H1jLLnrd8jHQmWPbo3cgkhwjFPrtRbqhO7ugVJsmEnYJBkUlsg59fqRKGvFIaq7xZNjbQ86Q_1tgKe8Wp1cuTPSC7pEUUAPiMkZ3bFSTt8lAglc81P1Qdiv0DNPj0cmKA0/s1600/Global_25_graphic_small.png" /></a></div></br> Please send your request and autosomal genotype data (from AncestryDNA, FTDNA, LivingDNA, MyHeritage or 23andMe) to <b>eurogenesblog at gmail dot com</b>.</br></br> However, note that this test is free for anyone who already has Global 10 coordinates (see <a href="https://eurogenes.blogspot.com/2016/10/a-fresh-look-at-global-genetic-diversity.html">here</a>). That's right, if you already have Global 10 coordinates, all you have to do is to send me your data and say what it's for. Simple as that.</br></br> ...</br></br> My <i>Celtic vs Germanic</i> Principal Component Analysis (PCA) is now available via the store for $6 USD (see <a href="https://eurogenes.blogspot.com/2018/09/celtic-vs-germanic-europe.html">here</a>). Please note that this test is only really useful for people of Central, Northern and/or Western European origin, and indeed geared for those of overwhelmingly Northwestern European ancestry.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjyP87G1s1cQO2kTOwWOxkSU6qQmIOA2_wXRL1cnWyvWXSHlpTsSnlLnaeFqeXcePrtKtxUPKX7mpzhQF0psfqx_DOT_3DfZid8W5hA4UAlIHR6GwdCuXW7sQr5L-GhreBrID1d6aZ7SjmS/s1600/Celto-Germanic_PCA_new.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="665" data-original-width="1218" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjyP87G1s1cQO2kTOwWOxkSU6qQmIOA2_wXRL1cnWyvWXSHlpTsSnlLnaeFqeXcePrtKtxUPKX7mpzhQF0psfqx_DOT_3DfZid8W5hA4UAlIHR6GwdCuXW7sQr5L-GhreBrID1d6aZ7SjmS/s480/Celto-Germanic_PCA_new.png" /></a></div></br> Please send your request and autosomal genotype data (from AncestryDNA, FTDNA, LivingDNA, MyHeritage or 23andMe) to <b>eurogenesblog at gmail dot com</b>.</br></br> ...</br></br> The popular Basal-rich K7 admixture test is now available via the store for $6 USD. <b>It's suitable for everyone, except people with significant (>10%) Sub-Saharan ancestry.</b> For more information about this test and some ideas about what to do with the output see <a href="https://eurogenes.blogspot.com/2016/07/sneak-peek-basal-eurasian-k7.html">here</a> and <a href="https://bga101.blogspot.com/2017/05/an-nmonte-and-4mix-guide-for.html">here</a>.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhuz8k7mJCG8udhSJD8nEt1YVN5gCdliUWAJVQdW-hlt9F33xx78_NAO0f-QHF8c6ZUi0xemCRRZ7pbDWHcXSnzNUCqtZrNMPbwKaYFkwswQgPgc-rhvV5plg8P64nQYZdQPGOcO-LvsacQ/s1600/K7_triangle.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="702" data-original-width="1218" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhuz8k7mJCG8udhSJD8nEt1YVN5gCdliUWAJVQdW-hlt9F33xx78_NAO0f-QHF8c6ZUi0xemCRRZ7pbDWHcXSnzNUCqtZrNMPbwKaYFkwswQgPgc-rhvV5plg8P64nQYZdQPGOcO-LvsacQ/s450/K7_triangle.png" /></a></div></br> Please send your request and autosomal genotype data (from AncestryDNA, FTDNA, LivingDNA, MyHeritage or 23andMe) to <b>eurogenesblog at gmail dot com</b>.</br></br> See also...</br></br> <a href="https://eurogenes.blogspot.com/2018/05/global25-workshop-1-that-classic-west.html">Global25 workshop 1: that classic West Eurasian plot</a></br></br> <a href="https://eurogenes.blogspot.com/2018/05/global25-workshop-2-intra-european.html">Global25 workshop 2: intra-European variation</a></br></br> <a href="https://eurogenes.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html">Global25 workshop 3: genes vs geography in Northern Europe</a></br></br> <a href="https://eurogenes.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">Modeling genetic ancestry with Davidski: step by step</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2021/08/genetic-ancestry-online-store.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2021/08/genetic-ancestry-online-store.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2021-08-09T18:33:00-07:00'>6:33 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=2548506783201613945&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=2548506783201613945&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=2548506783201613945&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); 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</script> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Thursday, August 6, 2020</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi4MESV_pxKYBaB1Q5cqEhS3du6zhwPZ40YOSsQVGEwMtjra8Qc9IE5v6tpAAQIxxwY9iHKxx9M90eON8x1zqXyo2Cyi8A9e9Fx6qoggljn-H2TlNW-WBdH5Ue8rvveRXrMzUG-qwZGC3w/s450/GENOPLOT_screen_cap.jpg' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='1707532590493680310' itemprop='postId'/> <a name='1707532590493680310'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2020/08/new-global25-interpretation-tools.html'>New Global25 interpretation tools</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-1707532590493680310' itemprop='description articleBody'> </br>They're available at <a href="https://yk.github.io/ancestry/">Ancestry Calculator</a> and <a href="https://genoplot.com/">GENOPLOT</a>. Unfortunately, I can't tell you exactly how to get the most out of them. All I can recommend is robust experimentation.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://genoplot.com" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="614" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi4MESV_pxKYBaB1Q5cqEhS3du6zhwPZ40YOSsQVGEwMtjra8Qc9IE5v6tpAAQIxxwY9iHKxx9M90eON8x1zqXyo2Cyi8A9e9Fx6qoggljn-H2TlNW-WBdH5Ue8rvveRXrMzUG-qwZGC3w/s450/GENOPLOT_screen_cap.jpg" /></a></div></br> See also...</br></br> <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">Getting the most out of the Global25</a></br></br> <a href="https://bga101.blogspot.com/2021/08/genetic-ancestry-online-store.html">Genetic ancestry online store</a></br></br> <a href="https://bga101.blogspot.com/2020/01/modeling-your-ancestry-has-never-been.html">Modeling your ancestry has never been easier</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2020/08/new-global25-interpretation-tools.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2020/08/new-global25-interpretation-tools.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2020-08-06T18:27:00-07:00'>6:27 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=1707532590493680310&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=1707532590493680310&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=1707532590493680310&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); return false;' target='_blank' title='BlogThis!'><span class='share-button-link-text'>BlogThis!</span></a><a class='goog-inline-block share-button sb-twitter' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=1707532590493680310&target=twitter' target='_blank' title='Share to X'><span class='share-button-link-text'>Share to X</span></a><a class='goog-inline-block share-button sb-facebook' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=1707532590493680310&target=facebook' onclick='window.open(this.href, "_blank", "height=430,width=640"); return false;' target='_blank' title='Share to Facebook'><span class='share-button-link-text'>Share to Facebook</span></a><a class='goog-inline-block share-button sb-pinterest' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=1707532590493680310&target=pinterest' target='_blank' title='Share to Pinterest'><span class='share-button-link-text'>Share to Pinterest</span></a> </div> </div> <div class='post-footer-line post-footer-line-2'> <span class='post-labels'> Labels: <a href='http://bga101.blogspot.com/search/label/admixture' rel='tag'>admixture</a>, <a href='http://bga101.blogspot.com/search/label/Ancestry%20Calculator' rel='tag'>Ancestry Calculator</a>, <a href='http://bga101.blogspot.com/search/label/ancestry%20proportions' rel='tag'>ancestry proportions</a>, <a href='http://bga101.blogspot.com/search/label/ancient%20DNA' rel='tag'>ancient DNA</a>, <a href='http://bga101.blogspot.com/search/label/Davidski' rel='tag'>Davidski</a>, <a href='http://bga101.blogspot.com/search/label/Eurogenes' rel='tag'>Eurogenes</a>, <a href='http://bga101.blogspot.com/search/label/Eurogenes%20BGA' rel='tag'>Eurogenes BGA</a>, <a href='http://bga101.blogspot.com/search/label/Eurogenes%20store' rel='tag'>Eurogenes store</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20ancestry' rel='tag'>genetic ancestry</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20test' rel='tag'>genetic test</a>, <a href='http://bga101.blogspot.com/search/label/GENOPLOT' rel='tag'>GENOPLOT</a>, <a href='http://bga101.blogspot.com/search/label/global%20genetic%20variation' rel='tag'>global genetic variation</a>, <a href='http://bga101.blogspot.com/search/label/Global25' rel='tag'>Global25</a>, <a href='http://bga101.blogspot.com/search/label/PCA' rel='tag'>PCA</a> </span> </div> <div class='post-footer-line post-footer-line-3'> <span class='post-location'> </span> </div> </div> </div> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Tuesday, January 14, 2020</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiW-dyAjTK2Ac4_fFWeUXV5za8H2eUAt8ORr4-46m8iu-7TXR3p46xTOTaeoMlIcV_TYfLOJKO-6v7AZCGGt5jEPYZymub0B44LB0tIOiEtyULI3Jfblv8tTlqO3ua8DfXFJAwvNaXmdJ3T/s420/V_guide1.png' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='5367603798019350534' itemprop='postId'/> <a name='5367603798019350534'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2020/01/modeling-your-ancestry-has-never-been.html'>Modeling your ancestry has never been easier</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-5367603798019350534' itemprop='description articleBody'> </br>An exceedingly simple, yet feature-packed, online tool ideal for modeling ancestry with <a href="https://bga101.blogspot.com/2017/10/genetic-ancestry-online-store-to-be.html">Global25</a> coordinates is freely available <a href="https://vahaduo.github.io/vahaduo/">HERE</a>. It works offline too, after downloading the web page onto your computer. Just copy paste the coordinates of your choice under the "source" and "target" tabs, and then mess around with the buttons to see what happens. The screen caps below show me doing just that.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiW-dyAjTK2Ac4_fFWeUXV5za8H2eUAt8ORr4-46m8iu-7TXR3p46xTOTaeoMlIcV_TYfLOJKO-6v7AZCGGt5jEPYZymub0B44LB0tIOiEtyULI3Jfblv8tTlqO3ua8DfXFJAwvNaXmdJ3T/s1600/V_guide1.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiW-dyAjTK2Ac4_fFWeUXV5za8H2eUAt8ORr4-46m8iu-7TXR3p46xTOTaeoMlIcV_TYfLOJKO-6v7AZCGGt5jEPYZymub0B44LB0tIOiEtyULI3Jfblv8tTlqO3ua8DfXFJAwvNaXmdJ3T/s420/V_guide1.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjXlMLZEv6z4l8YQOSZ1ZYEC7uML8T01yOTiPh26ZlOEi9UQltaLzU-SL8gfwLZYyLhwaLB7vUdfwRkJ5jylI2lfrS5VKbLorqAyILm_35c-MAoV5JrnG5e9OME3DmkAM1Qu-_dw6n9UQDm/s1600/V_guide2.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjXlMLZEv6z4l8YQOSZ1ZYEC7uML8T01yOTiPh26ZlOEi9UQltaLzU-SL8gfwLZYyLhwaLB7vUdfwRkJ5jylI2lfrS5VKbLorqAyILm_35c-MAoV5JrnG5e9OME3DmkAM1Qu-_dw6n9UQDm/s420/V_guide2.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEimEEnB7GRuTHRMMuStuLPPv0nYOoG7qkGeT6PmwZ9HcfhyphenhyphenHfa9bOXP5Np0_JhAxMS7DJoc9kHbeh1XtLmiLkx1ziTi40S6LrXp8HfRsmIT_Uf3zztl_E8D_oyHY-zkyaRGDO8qWBTcQ4ih/s1600/V_guide3.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEimEEnB7GRuTHRMMuStuLPPv0nYOoG7qkGeT6PmwZ9HcfhyphenhyphenHfa9bOXP5Np0_JhAxMS7DJoc9kHbeh1XtLmiLkx1ziTi40S6LrXp8HfRsmIT_Uf3zztl_E8D_oyHY-zkyaRGDO8qWBTcQ4ih/s420/V_guide3.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiYBIz82u2Cv-C6oKQDk-sS4N3rgB3VHmViemVS_0SDMVAw4lylYYEz-2ZseJvl0cAC01RF-_urqdAUv05u3lGaxRxn_bTBge0T02FUjcrK_jlm1ENo99awzc1QFCd7RzseQR88-XFou5AC/s1600/V_guide4.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiYBIz82u2Cv-C6oKQDk-sS4N3rgB3VHmViemVS_0SDMVAw4lylYYEz-2ZseJvl0cAC01RF-_urqdAUv05u3lGaxRxn_bTBge0T02FUjcrK_jlm1ENo99awzc1QFCd7RzseQR88-XFou5AC/s420/V_guide4.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjZTBy1pU0aXS-vHsoDMS22f_Ute3HJAnpjLyXnA7SfEqhGFy27jaGiSD2TBmFCCV0RpI5YEo-ZN1QugdXErpivb125Ub3vY8NQrVHKs61RsdWwDzvAcW5SH0R6N5UgopWtBqluzV5Lq9Ye/s1600/V_guide5.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjZTBy1pU0aXS-vHsoDMS22f_Ute3HJAnpjLyXnA7SfEqhGFy27jaGiSD2TBmFCCV0RpI5YEo-ZN1QugdXErpivb125Ub3vY8NQrVHKs61RsdWwDzvAcW5SH0R6N5UgopWtBqluzV5Lq9Ye/s420/V_guide5.png" /></a></div></br> Another free, easy to use online tool that works with Global25 coordinates is the Principal Component Analysis (PCA) runner <a href="https://vahaduo.github.io/g25views/#">HERE</a>. Below is a screen cap of me checking out one of the many PCA that it offers.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgN8tph3t5ZarRmQqnVILNPBTFxcmdj4eRN2NENtzVQb7-AVX0Ojc0wkgDpYrAIP8AQlGfQAo-QSJy5VHad6FtHuRcaTgfsa2VSbg0BFEjlXrm5V80MMJFzceWx9hsMHYs6pB0fLhT29Ej5/s1600/Vahaduo_g25views.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="668" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgN8tph3t5ZarRmQqnVILNPBTFxcmdj4eRN2NENtzVQb7-AVX0Ojc0wkgDpYrAIP8AQlGfQAo-QSJy5VHad6FtHuRcaTgfsa2VSbg0BFEjlXrm5V80MMJFzceWx9hsMHYs6pB0fLhT29Ej5/s480/Vahaduo_g25views.png" /></a></div></br> See also...</br></br> <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">Getting the most out of the Global25</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2020/01/modeling-your-ancestry-has-never-been.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2020/01/modeling-your-ancestry-has-never-been.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2020-01-14T12:44:00-08:00'>12:44 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=5367603798019350534&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5367603798019350534&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5367603798019350534&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); return false;' target='_blank' title='BlogThis!'><span class='share-button-link-text'>BlogThis!</span></a><a class='goog-inline-block share-button sb-twitter' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5367603798019350534&target=twitter' target='_blank' title='Share to X'><span class='share-button-link-text'>Share to X</span></a><a class='goog-inline-block share-button sb-facebook' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5367603798019350534&target=facebook' onclick='window.open(this.href, "_blank", "height=430,width=640"); return false;' target='_blank' title='Share to Facebook'><span class='share-button-link-text'>Share to Facebook</span></a><a class='goog-inline-block share-button sb-pinterest' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5367603798019350534&target=pinterest' target='_blank' title='Share to Pinterest'><span class='share-button-link-text'>Share to Pinterest</span></a> </div> </div> <div class='post-footer-line post-footer-line-2'> <span class='post-labels'> Labels: <a href='http://bga101.blogspot.com/search/label/admixture' rel='tag'>admixture</a>, <a href='http://bga101.blogspot.com/search/label/Anatolian%20Neolithic' rel='tag'>Anatolian Neolithic</a>, <a href='http://bga101.blogspot.com/search/label/ancestry%20proportions' rel='tag'>ancestry proportions</a>, <a href='http://bga101.blogspot.com/search/label/ancient%20DNA' rel='tag'>ancient DNA</a>, <a href='http://bga101.blogspot.com/search/label/archaeogenetics' rel='tag'>archaeogenetics</a>, <a href='http://bga101.blogspot.com/search/label/autosomal%20DNA' rel='tag'>autosomal DNA</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20ancestry' rel='tag'>genetic ancestry</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20genealogy' rel='tag'>genetic genealogy</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20test' rel='tag'>genetic test</a>, <a href='http://bga101.blogspot.com/search/label/global%20genetic%20variation' rel='tag'>global genetic variation</a>, <a href='http://bga101.blogspot.com/search/label/Global25' rel='tag'>Global25</a>, <a href='http://bga101.blogspot.com/search/label/PCA' rel='tag'>PCA</a>, <a href='http://bga101.blogspot.com/search/label/Vikings' rel='tag'>Vikings</a>, <a href='http://bga101.blogspot.com/search/label/WHG' rel='tag'>WHG</a>, <a href='http://bga101.blogspot.com/search/label/Yamnaya' rel='tag'>Yamnaya</a> </span> </div> <div class='post-footer-line post-footer-line-3'> <span class='post-location'> </span> </div> </div> </div> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Saturday, December 14, 2019</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhPkPIpNn1KMxB6ipTIQ0CoaF3p_bXsNAZXPYBULwMf4baMIct1SfE665-ISNEG1bnPuLSUSNFBSSl4gt1a2HnQjotsylX8FYq06C_Mhx-h87fqyvVwhwxymvvsUT_rTI697wxk7q7oLx-R/s480/Avalon_vs_Valhalla_screen_cap1.png' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='5338508551189956045' itemprop='postId'/> <a name='5338508551189956045'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2019/12/avalon-vs-valhalla-revisited.html'>Avalon vs Valhalla revisited</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-5338508551189956045' itemprop='description articleBody'> </br>Pictured below is a new version of my Celtic vs Germanic genetic map. It's based on the same Principal Component Analysis (PCA) as the original (which can be seen <a href="https://eurogenes.blogspot.com/2018/09/celtic-vs-germanic-europe.html">here</a>), but more focused on Northwestern Europe and produced with a different program.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhPkPIpNn1KMxB6ipTIQ0CoaF3p_bXsNAZXPYBULwMf4baMIct1SfE665-ISNEG1bnPuLSUSNFBSSl4gt1a2HnQjotsylX8FYq06C_Mhx-h87fqyvVwhwxymvvsUT_rTI697wxk7q7oLx-R/s1600/Avalon_vs_Valhalla_screen_cap1.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhPkPIpNn1KMxB6ipTIQ0CoaF3p_bXsNAZXPYBULwMf4baMIct1SfE665-ISNEG1bnPuLSUSNFBSSl4gt1a2HnQjotsylX8FYq06C_Mhx-h87fqyvVwhwxymvvsUT_rTI697wxk7q7oLx-R/s480/Avalon_vs_Valhalla_screen_cap1.png" /></a></div></br> To see the interactive online version, navigate to <a href="https://vahaduo.github.io/custompca/">Vahaduo Custom PCA</a> and copy paste the text from <a href="https://drive.google.com/open?id=15jg4asZD-cZK2cG_J_hN_vtQoZ7wM0R3">here</a> into the empty space under the PCA DATA tab. Then press the PLOT PCA button under the PCA PLOT tab. For more guidance, refer to the screen caps <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjNbwfVY0SAbLrRTT4Y8yFug2x2VSGh5yrsgdaPJy8EBIY-30JGmbyujAi5GUImCdvFEI0eH5KHYE0fIO_b-L67VSb-4M8p7U5sXuaOywZH9evVpPKnS14BaruC_vSy5Vc1g868ZwbVZ6Ee/s1600/Avalon_vs_Valhalla_screen_cap3.png">here</a> and <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhGjneiLKKbTzWa1tJFyzuR6R4Irz6ekXhVQTsJ9oon1kYXDfWcFq-uBrBR7OlnVtA-FsSNZJGJvhZ7mDCCod8QLaM077BN2SsZyRpvICdxh0c0q06qg4qPtgdESWhPkAKs1CwL7I-Ap8pr/s1600/Avalon_vs_Valhalla_screen_cap4.png">here</a>.</br></br> To include a wider range of populations in the key, just edit the data accordingly. For instance, to break up the ancient grouping into more specific populations, delete the <i>Ancient:</i> prefix in all of the relevant rows. This is what you should see:</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi0EnuYq6aj3n4BVIRM5d84BQeSiW6K8eVwphJyTWZk2XhOo1XmUo9ZVFPEb51LyatM0CDT9n6WpcJ4SGLAuM9_AZTQrlGn4RgYSSGz5goAE6UilDT8FuoOZRo_rgHRxVh-hiCLhLkIpnVa/s1600/Avalon_vs_Valhalla_screen_cap2.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi0EnuYq6aj3n4BVIRM5d84BQeSiW6K8eVwphJyTWZk2XhOo1XmUo9ZVFPEb51LyatM0CDT9n6WpcJ4SGLAuM9_AZTQrlGn4RgYSSGz5goAE6UilDT8FuoOZRo_rgHRxVh-hiCLhLkIpnVa/s480/Avalon_vs_Valhalla_screen_cap2.png" /></a></div></br> Conversely, you can leave the ancient sample set intact and instead reorder the present-day linguistic groupings into, say, geographic groupings. To achieve this just delete all of the linguistic prefixes, such as <i>Celtic:</i>, <i>Germanic:</i>, and so on. You should end up with a datasheet like <a href="https://drive.google.com/open?id=1HijZbNXeJjkMVVBSFDHoPqaK9eVjl8s9">this</a> and plot like <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi3iPMQ8SAI8hEeaRDhyfzhEmLUENbU90KelM5jXEKchXhmloNK9M6JigMNHrucMRIXFqD2Xvsmr5xIoSZMwDcZOrHD_2RM_2P_20NEU2e3TsUq5VHQAwEYykRFr7bHlI10ueyHCRLL5PF7/s1600/Avalon_vs_Valhalla_screen_cap5.png">this</a>.</br></br> <b>Of course, you can design your own plot by using any combination of the ancient and present-day individuals and populations that I've already run in this PCA. Their coordinates are listed <a href="https://drive.google.com/open?id=1k5XB-kQUul8yFC5reGLQw2-7HOdxrBij">here</a>. Indeed, if you're in the possession of your own Celtic vs Germanic PCA coordinates, you can add yourself to the plot. And if you're not, see <a href="https://eurogenes.blogspot.com/2017/10/genetic-ancestry-online-store-to-be.html">here</a>.</b></br></br> It's also possible to re-process PCA data via the SOURCE tab. But I don't recommend doing this with the Celtic vs Germanic data, which are derived from a fine scale analysis and don't pack much variation. On the other hand, Global25 data are ideal for such re-processing. I made the plots below from subsets of Global25 coordinates available in a zip file <a href="https://drive.google.com/open?id=1I8HRIf-F61Ytk-Mhz-vmGnhvOk21fF6e">here</a>. To see how, refer to the screen caps <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjduPKtfUZLyea2YuptQHFs9FOhcW-Y8fcrLpDfAHmymcE5sEenQQ7EuTFG34KzT2r3jEjGLlxu7E9r87C9hj9cWScAfmjZChtMTlIzP3_tP8m36wmyc5VUQdppiIAxOpHGXNB6_0ZRDOXc/s1600/V_Custom_PCA_screen_cap4.png">here</a> and <a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiDOdjSTSELNoV6MDPEcS0uCLsQSWqSnF_vcgAk5qW-epFf2zv8Edqd_bqIPb_nTTtHblkJVGpnWOqaC4cBfAf0ii6DAS6AND2n4Z2h4JM5iaweBP3mRmVCdSeCwRuD9uO7S3pSYVZkfDpA/s1600/V_Custom_PCA_screen_cap5.png">here</a>.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiMWaGnLpLSJbuUPLLxJZwE7XaPaL2HqXMNvnwvx-5JnSlY_aWZBHWZIDGgqmCIq_z2Jjn8gQQnNZ-BNqr_LdE-Ng3sWFweHox54Q12ETlumA6Q8PNRgAwy1ZokEJnfRq2NxbLxbOuDV2rm/s1600/V_Custom_PCA_screen_cap1.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiMWaGnLpLSJbuUPLLxJZwE7XaPaL2HqXMNvnwvx-5JnSlY_aWZBHWZIDGgqmCIq_z2Jjn8gQQnNZ-BNqr_LdE-Ng3sWFweHox54Q12ETlumA6Q8PNRgAwy1ZokEJnfRq2NxbLxbOuDV2rm/s480/V_Custom_PCA_screen_cap1.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjvx7qBvT-mPvWDckvlyJgsooRqswnt_JBhuBhJUr5MMCUX6zEen-8Qtc8fqeGHpJagVISp1qWbDzodds-qj0KPYe0fgBwwdO9P69uM1eGFY5FuhEP0SMIwRyw7t3qNl_lFn4ug5ARcjqqI/s1600/V_Custom_PCA_screen_cap2.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjvx7qBvT-mPvWDckvlyJgsooRqswnt_JBhuBhJUr5MMCUX6zEen-8Qtc8fqeGHpJagVISp1qWbDzodds-qj0KPYe0fgBwwdO9P69uM1eGFY5FuhEP0SMIwRyw7t3qNl_lFn4ug5ARcjqqI/s480/V_Custom_PCA_screen_cap2.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgwaBDVP7kz2cKoK609FkbVXV5IBj1hdVMkIHlSE56h1WCjJHS_MIxsIlhLgPEz9O9rDdwLPtW06URyyHAAO-V74dYwItFmifHtfKXNjZ5gNwBE-ubUd5vGlWLjZAo9mmODMGbskVma8y8Q/s1600/V_Custom_PCA_screen_cap3.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1299" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgwaBDVP7kz2cKoK609FkbVXV5IBj1hdVMkIHlSE56h1WCjJHS_MIxsIlhLgPEz9O9rDdwLPtW06URyyHAAO-V74dYwItFmifHtfKXNjZ5gNwBE-ubUd5vGlWLjZAo9mmODMGbskVma8y8Q/s480/V_Custom_PCA_screen_cap3.png" /></a></div></br> See also...</br></br> <a href="https://bga101.blogspot.com/2019/11/modeling-your-ancestry-has-never-been_30.html">Modeling your ancestry has never been easier</a></br></br> <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">Getting the most out of the Global25</a></br></br> <a href="https://bga101.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">Modeling genetic ancestry with Davidski: step by step</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2019/12/avalon-vs-valhalla-revisited.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2019/12/avalon-vs-valhalla-revisited.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2019-12-14T20:47:00-08:00'>8:47 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=5338508551189956045&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5338508551189956045&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5338508551189956045&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); return false;' target='_blank' title='BlogThis!'><span class='share-button-link-text'>BlogThis!</span></a><a class='goog-inline-block share-button sb-twitter' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5338508551189956045&target=twitter' target='_blank' title='Share to X'><span class='share-button-link-text'>Share to X</span></a><a class='goog-inline-block share-button sb-facebook' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5338508551189956045&target=facebook' onclick='window.open(this.href, "_blank", "height=430,width=640"); return false;' target='_blank' title='Share to Facebook'><span class='share-button-link-text'>Share to Facebook</span></a><a class='goog-inline-block share-button sb-pinterest' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=5338508551189956045&target=pinterest' target='_blank' title='Share to Pinterest'><span class='share-button-link-text'>Share to Pinterest</span></a> </div> </div> <div class='post-footer-line post-footer-line-2'> <span class='post-labels'> Labels: <a href='http://bga101.blogspot.com/search/label/ancient%20DNA' rel='tag'>ancient DNA</a>, <a href='http://bga101.blogspot.com/search/label/Anglo-Saxon' rel='tag'>Anglo-Saxon</a>, <a href='http://bga101.blogspot.com/search/label/Avalon' rel='tag'>Avalon</a>, <a href='http://bga101.blogspot.com/search/label/British%20Isles' rel='tag'>British Isles</a>, <a href='http://bga101.blogspot.com/search/label/Celtic' rel='tag'>Celtic</a>, <a href='http://bga101.blogspot.com/search/label/Celtic%20vs%20Germanic' rel='tag'>Celtic vs Germanic</a>, <a href='http://bga101.blogspot.com/search/label/Gaelic' rel='tag'>Gaelic</a>, <a href='http://bga101.blogspot.com/search/label/Germanic' rel='tag'>Germanic</a>, <a href='http://bga101.blogspot.com/search/label/Ireland' rel='tag'>Ireland</a>, <a href='http://bga101.blogspot.com/search/label/Irish' rel='tag'>Irish</a>, <a href='http://bga101.blogspot.com/search/label/Nordic' rel='tag'>Nordic</a>, <a href='http://bga101.blogspot.com/search/label/North%20Sea' rel='tag'>North Sea</a>, <a href='http://bga101.blogspot.com/search/label/Northern%20Europe' rel='tag'>Northern Europe</a>, <a href='http://bga101.blogspot.com/search/label/Northwestern%20Europe' rel='tag'>Northwestern Europe</a>, <a href='http://bga101.blogspot.com/search/label/PCA' rel='tag'>PCA</a>, <a href='http://bga101.blogspot.com/search/label/Scandinavia' rel='tag'>Scandinavia</a>, <a href='http://bga101.blogspot.com/search/label/Valhalla' rel='tag'>Valhalla</a>, <a href='http://bga101.blogspot.com/search/label/Viking' rel='tag'>Viking</a> </span> </div> <div class='post-footer-line post-footer-line-3'> <span class='post-location'> </span> </div> </div> </div> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Friday, July 12, 2019</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiY4XaB1vdw7A5kJOBORo4ruV0r5o0hrIBCHHOYeXrUbFwc7P1_stVkAnB9sqonJ4yhNljVIum0PcYKho-2pjZktiXVF1fV46EfWmpGceim9Hg28RrrnRBuzta8UMwvE0_d4-IJCpj1KiA/s430/G25_guide1.png' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='4120078753671649699' itemprop='postId'/> <a name='4120078753671649699'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html'>Getting the most out of the Global25</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-4120078753671649699' itemprop='description articleBody'> </br>The first thing you need to know about the <a href="https://bga101.blogspot.com/2017/10/genetic-ancestry-online-store-to-be.html">Global25</a> is that I update the relevant datasheets regularly, usually every few weeks, but they're always at these links:</br></br> <blockquote><a href="https://drive.google.com/open?id=1UrhcfNMLW0oMXIbHGUE60v2taCM7PFw1">Global25 datasheet ancient scaled</a></br></br> <a href="https://drive.google.com/open?id=1F2rKEVtu8nWSm7qFhxPU6UESQNsmA-sl">Global25 pop averages ancient scaled</a></a></br></br> <a href="https://drive.google.com/open?id=1YKkEOtyV5SISvmY_FyS4YSLXCxxYt5_W">Global25 datasheet ancient</a></br></br> <a href="https://drive.google.com/open?id=1f0imQyVNZ9RPESNAYIeIkA8fx4wAVNYo">Global25 pop averages ancient</a></br></br> ...</br></br> <a href="https://drive.google.com/open?id=1HYrDwxEXv82DvDLoq736pS5ZTGJA4dn5">Global25 datasheet modern scaled</a></br></br> <a href="https://drive.google.com/open?id=1wZr-UOve0KUKo_Qbgeo27m-CQncZWb8y">Global25 pop averages modern scaled</a></br></br> <a href="https://drive.google.com/open?id=18GcEVEl3GI-ByviD-TgQQjvEaaTbNTr2">Global25 datasheet modern</a></br></br> <a href="https://drive.google.com/open?id=1y49hyvviJpHj9esVqyeiFm32DhnPlfRQ">Global25 pop averages modern</a></blockquote></br> Each sample has a population code and an individual code. The population codes represent the countries, ethnic groups and/or archeological affinities of the samples, and I often modify these codes to suit my needs. On the other hand, the individual codes are unique to most of the samples and I usually don't change them.</br></br> So if you'd like to know more details about the samples try searching for their individual codes via a decent online search engine. Basic information about many of the samples is also available in the "anno" files <a href="https://reich.hms.harvard.edu/downloadable-genotypes-worlds-published-ancient-dna-data">here</a>.</br></br> The main purpose of the Global25 is to provide data for mixture modeling. In other words, for estimating ancestry proportions, both ancient and modern (see <a href="https://bga101.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">here</a>). This can be done on your computer with the R program and the nMonte R script, or online with a couple of different tools, which I discuss below.</br></br> If you don't have R installed on your computer, you can get it <a href="https://cloud.r-project.org/">here</a>, while nMonte is available <a href="https://www.dropbox.com/sh/1iaggxyc2alafow/AACIjLtnkuaNNsJ5oKME_3XHa?dl=0">here</a>. For this tutorial please download nMonte and nMonte3, and store them in your main working folder (usually My Documents).</br></br> Once you have R set up, make sure its working directory is the same place where you stored nMonte. You can check this in R by clicking on "File" and then "Change dir". Additionally, you'll need two nMonte input files in the working directory titled "data" and "target". Examples of these files are available <a href="https://drive.google.com/open?id=1WZ-r84g4r7rPFtZWjPVVuYObUnJeb779">here</a>. We'll be using them to test the ancient ancestry proportions of a sample set from present-day England.</br></br> Before you can begin the analysis you need to first call the nMonte script by typing or copy pasting <i>source('nMonte.R')</i> into the R console window, and then hitting "enter" on your keyboard. This is what you should see in the R console window afterwards.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiY4XaB1vdw7A5kJOBORo4ruV0r5o0hrIBCHHOYeXrUbFwc7P1_stVkAnB9sqonJ4yhNljVIum0PcYKho-2pjZktiXVF1fV46EfWmpGceim9Hg28RrrnRBuzta8UMwvE0_d4-IJCpj1KiA/s1600/G25_guide1.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="472" data-original-width="681" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiY4XaB1vdw7A5kJOBORo4ruV0r5o0hrIBCHHOYeXrUbFwc7P1_stVkAnB9sqonJ4yhNljVIum0PcYKho-2pjZktiXVF1fV46EfWmpGceim9Hg28RrrnRBuzta8UMwvE0_d4-IJCpj1KiA/s430/G25_guide1.png" /></a></div></br> To start the mixture modeling process, type or copy paste <i>getMonte('data.txt', 'target.txt')</i> into the R console window, hit "enter", and wait for the results. After a short time, probably less than a minute or two, you should see this output.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgwEzGUJv2bCEN6w6AqeTwCItLpYx3mNUht0c0t_JKP9t68me-vrnU4ZHJWfU7vzECBQcKoA3PvAXS09o76S6r7IiV0V-k5ribAOD0dep3_-KSVHtEL1Silm-t_u0m2z8n8HqhihEzi3Qk/s1600/G25_guide2.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="472" data-original-width="681" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgwEzGUJv2bCEN6w6AqeTwCItLpYx3mNUht0c0t_JKP9t68me-vrnU4ZHJWfU7vzECBQcKoA3PvAXS09o76S6r7IiV0V-k5ribAOD0dep3_-KSVHtEL1Silm-t_u0m2z8n8HqhihEzi3Qk/s430/G25_guide2.png" /></a></div></br> The data and target files contain population averages. And, as you can see, the results that these population averages have produced are in line with what one would expect from such a model focusing on the genetic shifts in Northern Europe during the Late Neolithic. Very similar ancient ancestry proportions have been reported for the English and other Northern Europeans recently in scientific literature.</br></br> However, when focusing on exceptionally fine-scale genetic variation that isn't reflected too well in the Global25 population averages, a more effective strategy <i>might be</i> to use multiple individuals from each reference population and let nMonte3 aggregate and average the inferred ancestry proportions.</br></br> This is often the case when attempting to model ancestry proportions for more recent periods, such as the Middle Ages. So let's try this with the English sample set using a modified data file, which is available <a href="https://drive.google.com/open?id=1UXX9tbNfAebphVPG2jCz-c3WyyPGs7Uw">here</a>.</br></br> Replace the old data file with the new one in your working directory, and, like before, copy paste into the R console window the following two commands, hitting "enter" after each one: <i>source('nMonte3.R')</i> and <i>getMonte('data.txt', 'target.txt')</i>. This is what you should eventually see.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjCaE-Ktk5enpFg31aM5zhycVA8NFBuCkS_o1spEvaOMKJRjU206p07B_v3sySfkCmE-iw4xQDgJGlLUG_r9wopsBHOOYd_6LjAQhrwsxOc3CTJqTRxCrsj_n5Z2Z43u0IjtOXUNTh1G-I/s1600/G25_guide3.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="472" data-original-width="681" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjCaE-Ktk5enpFg31aM5zhycVA8NFBuCkS_o1spEvaOMKJRjU206p07B_v3sySfkCmE-iw4xQDgJGlLUG_r9wopsBHOOYd_6LjAQhrwsxOc3CTJqTRxCrsj_n5Z2Z43u0IjtOXUNTh1G-I/s430/G25_guide3.png" /></a></div></br> It's difficult to say how accurate these estimates are. But they look more or less correct considering the limited and less than ideal reference samples. For instance, the individuals labeled SWE_Viking_Age_Sigtuna are supposed to be stand ins for Danish and Norwegian Vikings, but they're a relatively heterogeneous group from Sweden, possibly with some British or Irish ancestry, so they might be skewing the results.</br></br> However, I'll be adding many more ancient samples to the Global25 datasheets as they become available, including lots of new Vikings, which should greatly improve the accuracy of these sorts of fine-scale mixture models.</br></br> An exceedingly simple, yet feature-packed, online tool ideal for modeling ancestry with Global25 coordinates is the VahaduoJS. It's freely available <a href="https://vahaduo.github.io/vahaduo/">HERE</a>, and it works offline too after downloading the web page. Just copy paste the coordinates of your choice under the "source" and "target" tabs, and then mess around with the buttons to see what happens. The screen caps below show me doing just that.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiW-dyAjTK2Ac4_fFWeUXV5za8H2eUAt8ORr4-46m8iu-7TXR3p46xTOTaeoMlIcV_TYfLOJKO-6v7AZCGGt5jEPYZymub0B44LB0tIOiEtyULI3Jfblv8tTlqO3ua8DfXFJAwvNaXmdJ3T/s1600/V_guide1.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiW-dyAjTK2Ac4_fFWeUXV5za8H2eUAt8ORr4-46m8iu-7TXR3p46xTOTaeoMlIcV_TYfLOJKO-6v7AZCGGt5jEPYZymub0B44LB0tIOiEtyULI3Jfblv8tTlqO3ua8DfXFJAwvNaXmdJ3T/s420/V_guide1.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjXlMLZEv6z4l8YQOSZ1ZYEC7uML8T01yOTiPh26ZlOEi9UQltaLzU-SL8gfwLZYyLhwaLB7vUdfwRkJ5jylI2lfrS5VKbLorqAyILm_35c-MAoV5JrnG5e9OME3DmkAM1Qu-_dw6n9UQDm/s1600/V_guide2.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjXlMLZEv6z4l8YQOSZ1ZYEC7uML8T01yOTiPh26ZlOEi9UQltaLzU-SL8gfwLZYyLhwaLB7vUdfwRkJ5jylI2lfrS5VKbLorqAyILm_35c-MAoV5JrnG5e9OME3DmkAM1Qu-_dw6n9UQDm/s420/V_guide2.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEimEEnB7GRuTHRMMuStuLPPv0nYOoG7qkGeT6PmwZ9HcfhyphenhyphenHfa9bOXP5Np0_JhAxMS7DJoc9kHbeh1XtLmiLkx1ziTi40S6LrXp8HfRsmIT_Uf3zztl_E8D_oyHY-zkyaRGDO8qWBTcQ4ih/s1600/V_guide3.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEimEEnB7GRuTHRMMuStuLPPv0nYOoG7qkGeT6PmwZ9HcfhyphenhyphenHfa9bOXP5Np0_JhAxMS7DJoc9kHbeh1XtLmiLkx1ziTi40S6LrXp8HfRsmIT_Uf3zztl_E8D_oyHY-zkyaRGDO8qWBTcQ4ih/s420/V_guide3.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiYBIz82u2Cv-C6oKQDk-sS4N3rgB3VHmViemVS_0SDMVAw4lylYYEz-2ZseJvl0cAC01RF-_urqdAUv05u3lGaxRxn_bTBge0T02FUjcrK_jlm1ENo99awzc1QFCd7RzseQR88-XFou5AC/s1600/V_guide4.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEiYBIz82u2Cv-C6oKQDk-sS4N3rgB3VHmViemVS_0SDMVAw4lylYYEz-2ZseJvl0cAC01RF-_urqdAUv05u3lGaxRxn_bTBge0T02FUjcrK_jlm1ENo99awzc1QFCd7RzseQR88-XFou5AC/s420/V_guide4.png" /></a></div></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjZTBy1pU0aXS-vHsoDMS22f_Ute3HJAnpjLyXnA7SfEqhGFy27jaGiSD2TBmFCCV0RpI5YEo-ZN1QugdXErpivb125Ub3vY8NQrVHKs61RsdWwDzvAcW5SH0R6N5UgopWtBqluzV5Lq9Ye/s1600/V_guide5.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="669" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjZTBy1pU0aXS-vHsoDMS22f_Ute3HJAnpjLyXnA7SfEqhGFy27jaGiSD2TBmFCCV0RpI5YEo-ZN1QugdXErpivb125Ub3vY8NQrVHKs61RsdWwDzvAcW5SH0R6N5UgopWtBqluzV5Lq9Ye/s420/V_guide5.png" /></a></div></br> However, it's important to note that the Global25 is a Principal Component Analysis (PCA), so it makes good sense to also use it for producing PCA graphs. To do this just plot any combination of two or three of its Principal Components (PCs) to create 2D or 3D graphs, respectively. This can be done with a wide variety of programs, including PAST, which is freely available <a href="https://folk.uio.no/ohammer/past/index.html">here</a>.</br></br> To produce a 2D graph, open a Global25 datasheet in PAST, choose comma as the separator, highlight any two columns of data, click on the "Plot" tab and, from the drop down list, pick "XY graph". Below is a series of graphs that I created in exactly this way. I also color coded the samples according to their geographic origins. This was done by ticking the "Row attributes" tab.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhMqCYJGM8dhEjyDW8Z9BYuVctgPa_HsclUOI8zDpF38ISw816zyJrIxTPEdCasmMfGhbMufUwX0CAWKvl-6_70FRMR8f8JDo7OMjee9dI3wX6gjyN4jGUk9yRSjHA_QEZ-a-XBBH3Z_NQ/s1600/G25_PCA.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="1558" data-original-width="1252" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhMqCYJGM8dhEjyDW8Z9BYuVctgPa_HsclUOI8zDpF38ISw816zyJrIxTPEdCasmMfGhbMufUwX0CAWKvl-6_70FRMR8f8JDo7OMjee9dI3wX6gjyN4jGUk9yRSjHA_QEZ-a-XBBH3Z_NQ/s460/G25_PCA.png" /></a></div></br> PAST can also be used to run PCA on subsets of the Global25 scaled data to produce remarkably accurate plots of fine-scale population structure. For instance, here's a plot based on present-day populations from north of the Alps, Balkans and Pyrenees.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjfprzi6fTubvtOEkKJXsRlpOjTw_uwBbeAP9I8yB6rY0q2dpf4oAZ94oTxZNMfNOG8Q6LGRu_EtObGTAhghxjYA-ufIpOj-WUsdLFkbH0g0I-JkwC-L38he1X-LH3U7T0IL-gKWV9DrSO8/s1600/G25_North_Euro_PCA.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="560" data-original-width="1081" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjfprzi6fTubvtOEkKJXsRlpOjTw_uwBbeAP9I8yB6rY0q2dpf4oAZ94oTxZNMfNOG8Q6LGRu_EtObGTAhghxjYA-ufIpOj-WUsdLFkbH0g0I-JkwC-L38he1X-LH3U7T0IL-gKWV9DrSO8/s480/G25_North_Euro_PCA.png" /></a></div></br> To try this create a new text file with your choice of populations from the Global25 scaled datasheet, open it with PAST and choose Multivariate > Ordination > Principal Components Analysis. I've already put together several datasheets limited to European, Northern European, West Eurasian and South Asian populations. They're available at the links below along with more details on how to run them with PAST.</br></br> <blockquote><a href="https://bga101.blogspot.com/2018/08/global25-workshop-1-that-classic-west.html">Global25 workshop 1: that classic West Eurasian plot</a></br></br> <a href="https://bga101.blogspot.com/2018/08/global25-workshop-2-intra-european.html">Global25 workshop 2: intra-European variation</a></br></br> <a href="https://bga101.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html">Global25 workshop 3: genes vs geography in Northern Europe</a></br></br> <a href="https://eurogenes.blogspot.com/2018/08/the-south-asian-cline-that-no-longer.html">The South Asian cline that no longer exists</a></blockquote></br> Another free, easy to use online tool that works with Global25 coordinates is the Vahaduo Global25 Views [<a href="https://vahaduo.github.io/g25views/#">LINK</a>]. Below is a screen cap of me checking out one of the many PCA that it offers.</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgN8tph3t5ZarRmQqnVILNPBTFxcmdj4eRN2NENtzVQb7-AVX0Ojc0wkgDpYrAIP8AQlGfQAo-QSJy5VHad6FtHuRcaTgfsa2VSbg0BFEjlXrm5V80MMJFzceWx9hsMHYs6pB0fLhT29Ej5/s1600/Vahaduo_g25views.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="668" data-original-width="1300" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEgN8tph3t5ZarRmQqnVILNPBTFxcmdj4eRN2NENtzVQb7-AVX0Ojc0wkgDpYrAIP8AQlGfQAo-QSJy5VHad6FtHuRcaTgfsa2VSbg0BFEjlXrm5V80MMJFzceWx9hsMHYs6pB0fLhT29Ej5/s480/Vahaduo_g25views.png" /></a></div></br> And if you're fond of tree-like structures as a means to describe fine-scale genetic variation, please see this blog post...</br></br> <blockquote><a href="https://eurogenes.blogspot.com/2019/07/global25-workshop-4-neighbor-joining.html">Global25 workshop 4: a neighbour joining tree</a></blockquote></br> See also...</br></br> <a href="https://bga101.blogspot.com/2020/08/new-global25-interpretation-tools.html">New Global25 interpretation tools</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2019-07-12T07:58:00-07:00'>7:58 AM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=4120078753671649699&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=4120078753671649699&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=4120078753671649699&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); return false;' target='_blank' title='BlogThis!'><span class='share-button-link-text'>BlogThis!</span></a><a class='goog-inline-block share-button sb-twitter' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=4120078753671649699&target=twitter' target='_blank' title='Share to X'><span class='share-button-link-text'>Share to X</span></a><a class='goog-inline-block share-button sb-facebook' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=4120078753671649699&target=facebook' onclick='window.open(this.href, "_blank", "height=430,width=640"); return false;' target='_blank' title='Share to Facebook'><span class='share-button-link-text'>Share to Facebook</span></a><a class='goog-inline-block share-button sb-pinterest' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=4120078753671649699&target=pinterest' target='_blank' title='Share to Pinterest'><span class='share-button-link-text'>Share to Pinterest</span></a> </div> </div> <div class='post-footer-line post-footer-line-2'> <span class='post-labels'> Labels: <a href='http://bga101.blogspot.com/search/label/admixture' rel='tag'>admixture</a>, <a href='http://bga101.blogspot.com/search/label/Anatolian%20Neolithic' rel='tag'>Anatolian Neolithic</a>, <a href='http://bga101.blogspot.com/search/label/ancestry%20proportions' rel='tag'>ancestry proportions</a>, <a href='http://bga101.blogspot.com/search/label/ancient%20DNA' rel='tag'>ancient DNA</a>, <a href='http://bga101.blogspot.com/search/label/archaeogenetics' rel='tag'>archaeogenetics</a>, <a href='http://bga101.blogspot.com/search/label/autosomal%20DNA' rel='tag'>autosomal DNA</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20ancestry' rel='tag'>genetic ancestry</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20genealogy' rel='tag'>genetic genealogy</a>, <a href='http://bga101.blogspot.com/search/label/genetic%20test' rel='tag'>genetic test</a>, <a href='http://bga101.blogspot.com/search/label/global%20genetic%20variation' rel='tag'>global genetic variation</a>, <a href='http://bga101.blogspot.com/search/label/Global25' rel='tag'>Global25</a>, <a href='http://bga101.blogspot.com/search/label/PCA' rel='tag'>PCA</a>, <a href='http://bga101.blogspot.com/search/label/Vikings' rel='tag'>Vikings</a>, <a href='http://bga101.blogspot.com/search/label/WHG' rel='tag'>WHG</a>, <a href='http://bga101.blogspot.com/search/label/Yamnaya' rel='tag'>Yamnaya</a> </span> </div> <div class='post-footer-line post-footer-line-3'> <span class='post-location'> </span> </div> </div> </div> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Sunday, June 9, 2019</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhG5l4L4C4iQre-g92kmRAs4QUY6QuP3G7RsyjRKCGLTkOh6ZHBCL2d4dH-jDbguoob_Q02TFJpPKxLuMlNwabg9tlwe8_jcW1lfjuijx1PApjZJuhQapii0y743Xu9kz_tGy-S3Tex3R0/s450/Web_runner_screen_cap.jpg' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='7265325301021108947' itemprop='postId'/> <a name='7265325301021108947'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2019/06/global25-nmonte-runner.html'>Global25 nMonte runner</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-7265325301021108947' itemprop='description articleBody'> <br>Those of you who are having trouble with making use of your Global25 coordinates on your own computers, please be aware that there's an online tool that might be of help. It's called the <a href="http://185.144.156.77:3000/">Global25 nMonte runner</a> and very easy to use. For more info see <a href="https://anthrogenica.com/showthread.php?14849-Automated-Global25-nMonte-entirely-from-the-web">here</a>.<br><br> <div class="separator" style="clear: both; text-align: center;"><a href="http://185.144.156.77:3000/" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="594" data-original-width="750" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEhG5l4L4C4iQre-g92kmRAs4QUY6QuP3G7RsyjRKCGLTkOh6ZHBCL2d4dH-jDbguoob_Q02TFJpPKxLuMlNwabg9tlwe8_jcW1lfjuijx1PApjZJuhQapii0y743Xu9kz_tGy-S3Tex3R0/s450/Web_runner_screen_cap.jpg" /></a></div><br> See also...<br><br> <a href="https://bga101.blogspot.com/2017/10/genetic-ancestry-online-store-to-be.html">Genetic ancestry online store (to be updated regularly)</a><br><br> <a href="https://bga101.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">Modeling genetic ancestry with Davidski: step by step</a><br><br> <a href="https://bga101.blogspot.com/2018/03/if-youre-using-my-tools-to-find-jewish.html">If you're using my tools to find Jewish ancestry please read this</a><br><br> <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">Getting the most out of the Global25</a></br></br> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2019/06/global25-nmonte-runner.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2019/06/global25-nmonte-runner.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2019-06-09T18:34:00-07:00'>6:34 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=7265325301021108947&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=7265325301021108947&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=7265325301021108947&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); return false;' target='_blank' title='BlogThis!'><span class='share-button-link-text'>BlogThis!</span></a><a class='goog-inline-block share-button sb-twitter' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=7265325301021108947&target=twitter' target='_blank' title='Share to X'><span class='share-button-link-text'>Share to X</span></a><a class='goog-inline-block share-button sb-facebook' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=7265325301021108947&target=facebook' onclick='window.open(this.href, "_blank", "height=430,width=640"); return false;' target='_blank' title='Share to Facebook'><span class='share-button-link-text'>Share to Facebook</span></a><a class='goog-inline-block share-button sb-pinterest' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=7265325301021108947&target=pinterest' target='_blank' title='Share to Pinterest'><span class='share-button-link-text'>Share to Pinterest</span></a> </div> </div> <div class='post-footer-line post-footer-line-2'> <span class='post-labels'> </span> </div> <div class='post-footer-line post-footer-line-3'> <span class='post-location'> </span> </div> </div> </div> </div> </div></div> <div class="date-outer"> <h2 class='date-header'><span>Saturday, August 25, 2018</span></h2> <div class="date-posts"> <div class='post-outer'> <div class='post hentry uncustomized-post-template' itemprop='blogPost' itemscope='itemscope' itemtype='http://schema.org/BlogPosting'> <meta content='https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjfprzi6fTubvtOEkKJXsRlpOjTw_uwBbeAP9I8yB6rY0q2dpf4oAZ94oTxZNMfNOG8Q6LGRu_EtObGTAhghxjYA-ufIpOj-WUsdLFkbH0g0I-JkwC-L38he1X-LH3U7T0IL-gKWV9DrSO8/s480/G25_North_Euro_PCA.png' itemprop='image_url'/> <meta content='580285511478951760' itemprop='blogId'/> <meta content='2846801377725213136' itemprop='postId'/> <a name='2846801377725213136'></a> <h3 class='post-title entry-title' itemprop='name'> <a href='http://bga101.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html'>Global25 workshop 3: genes vs geography in Northern Europe</a> </h3> <div class='post-header'> <div class='post-header-line-1'></div> </div> <div class='post-body entry-content' id='post-body-2846801377725213136' itemprop='description articleBody'> </br>To produce the intra-North European Principal Components Analysis (PCA) plot below, download this <a href="https://drive.google.com/file/d/1HvtcnHd0i6BaocSGmgSAOU78NG7gIWZz/view?usp=sharing">datasheet</a>, plug it into the PAST program, which is freely available <a href="https://folk.uio.no/ohammer/past/index.html">here</a>, then select all of the columns by clicking on the empty tab above the labels, and choose Multivariate > Ordination > Principal Components or Discriminant Analysis. This is what you should end up with...</br></br> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjfprzi6fTubvtOEkKJXsRlpOjTw_uwBbeAP9I8yB6rY0q2dpf4oAZ94oTxZNMfNOG8Q6LGRu_EtObGTAhghxjYA-ufIpOj-WUsdLFkbH0g0I-JkwC-L38he1X-LH3U7T0IL-gKWV9DrSO8/s1600/G25_North_Euro_PCA.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="560" data-original-width="1081" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEjfprzi6fTubvtOEkKJXsRlpOjTw_uwBbeAP9I8yB6rY0q2dpf4oAZ94oTxZNMfNOG8Q6LGRu_EtObGTAhghxjYA-ufIpOj-WUsdLFkbH0g0I-JkwC-L38he1X-LH3U7T0IL-gKWV9DrSO8/s480/G25_North_Euro_PCA.png" /></a></div> <div class="separator" style="clear: both; text-align: center;"><a href="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi_tEjUxhmte-8NvmnD-pqnoeRfrGTyLIb3zq4Az-VW5xEdW6tKVwDU8mC7WRnP9LRXD3dqIr5yXlBbZzglrZdzJ4h4ln4zOLmPbvF3G3fA02gzkR683frtvNsJcO0ApkF15a2NMX1g_RnU/s1600/G25_North_Euro_LDA.png" imageanchor="1" style="margin-left: 1em; margin-right: 1em;"><img border="0" data-original-height="541" data-original-width="663" src="https://blogger.googleusercontent.com/img/b/R29vZ2xl/AVvXsEi_tEjUxhmte-8NvmnD-pqnoeRfrGTyLIb3zq4Az-VW5xEdW6tKVwDU8mC7WRnP9LRXD3dqIr5yXlBbZzglrZdzJ4h4ln4zOLmPbvF3G3fA02gzkR683frtvNsJcO0ApkF15a2NMX1g_RnU/s400/G25_North_Euro_LDA.png" /></a></div></br> I'd say that the result more or less resembles a geographic map of Northern Europe. Of course, if you're in the possession of your own personal Global25 coordinates, you can add yourself to this plot to check whether your position matches your geographic origin.</br></br> Please keep in mind, however, that the vast majority (>90%) of your ancestry must be from north of the Alps, Balkans and Pyrenees to obtain a sensible outcome. Also please ensure that all of the columns in the datasheet are filled out correctly, including the group column, otherwise your position on the plot will be skewed.</br></br> See also...</br></br> <a href="https://bga101.blogspot.com/2018/08/global25-workshop-1-that-classic-west.html">Global25 workshop 1: that classic West Eurasian plot</a></br></br> <a href="https://bga101.blogspot.com/2018/08/global25-workshop-2-intra-european.html">Global25 workshop 2: intra-European variation</a></br></br> <a href="https://bga101.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html">Global25 workshop 3: genes vs geography in Northern Europe</a></br></br> <a href="https://eurogenes.blogspot.com/2019/07/global25-workshop-4-neighbor-joining.html">Global25 workshop 4: a neighbour joining tree</a></br></br> <a href="https://bga101.blogspot.com/2018/02/modeling-genetic-ancestry-with-davidski.html">Modeling genetic ancestry with Davidski: step by step</a></br></br> <a href="https://bga101.blogspot.com/2019/07/getting-most-out-of-global25.html">Getting the most out of the Global25</a></br></br> <a href="https://eurogenes.blogspot.com/2017/10/genetic-ancestry-online-store-to-be.html">Genetic ancestry online store (to be updated regularly)</a><br/><br/> <div style='clear: both;'></div> </div> <div class='post-footer'> <div class='post-footer-line post-footer-line-1'> <span class='post-author vcard'> Posted by <span class='fn' itemprop='author' itemscope='itemscope' itemtype='http://schema.org/Person'> <meta content='https://www.blogger.com/profile/04637918905430604850' itemprop='url'/> <a class='g-profile' href='https://www.blogger.com/profile/04637918905430604850' rel='author' title='author profile'> <span itemprop='name'>Davidski</span> </a> </span> </span> <span class='post-timestamp'> at <meta content='http://bga101.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html' itemprop='url'/> <a class='timestamp-link' href='http://bga101.blogspot.com/2018/08/global25-workshop-3-genes-vs-geography.html' rel='bookmark' title='permanent link'><abbr class='published' itemprop='datePublished' title='2018-08-25T23:34:00-07:00'>11:34 PM</abbr></a> </span> <span class='post-comment-link'> </span> <span class='post-icons'> <span class='item-control blog-admin pid-1763001476'> <a href='https://www.blogger.com/post-edit.g?blogID=580285511478951760&postID=2846801377725213136&from=pencil' title='Edit Post'> <img alt='' class='icon-action' height='18' src='https://resources.blogblog.com/img/icon18_edit_allbkg.gif' width='18'/> </a> </span> </span> <div class='post-share-buttons goog-inline-block'> <a class='goog-inline-block share-button sb-email' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=2846801377725213136&target=email' target='_blank' title='Email This'><span class='share-button-link-text'>Email This</span></a><a class='goog-inline-block share-button sb-blog' href='https://www.blogger.com/share-post.g?blogID=580285511478951760&postID=2846801377725213136&target=blog' onclick='window.open(this.href, "_blank", "height=270,width=475"); 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