Websites - CSHL DNA Learning Center

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class="tint-bg">Websites</span> </h1> </header > </div> </div> <div class="row"> <div class="col-md-9 col-sm-10 center-block"> <header> <p>The DNALC’s award-winning suite of websites includes primers on DNA structure and function, genetic disorders, the molecular basis of cancer, the history of maize cultivation, and the American eugenics movement. Lab websites provide open source methods for students to actively explore scientific techniques and bioinformatics websites enable students to analyze genes and genomes.</p> </header> <div class="col-md-10 col-sm-10 center-block" style="border: 1px solid #999999; padding: 5px;"> <h5 >IMPORTANT: Adobe Flash Information</h5> <p class="small">Flash animation technology is no longer supported by web browsers. Several DNALC websites were built using Flash and we have installed the open-source <strong class="redtext">Flash emulator, Ruffle,</strong> on some of them. Some sites have been retired (see bottom of this page), but much of the animation and video content is available in the <a href="/resources/animations/">Resources</a> section. If there is an item you can no longer find, please email dnalc-it@cshl.edu. </p> </div> </div> </div> </div> </div> </section> <section class="light-bg"> <div class="container inner-top-sm inner-bottom" > <div class="row inner-bottom-xs" > <div class="col-sm-12" > <ul class="format-filter text-center"> <li><a class="active" href="#" data-filter="*">All</a></li> <li><a href="#" data-filter=".educational-site">Educational Sites</a></li> <li><a href="#" data-filter=".laboratory-site">Laboratory Sites</a></li> <li><a href="#" data-filter=".bioinformatics-site">Bioinformatics Sites</a></li> </ul> </div> </div> <div class="row"> <div class="col-sm-12" > <div class="grid-media col-3 no-sidebar text-center"> <div class="posts" > <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.dnaftb.org/"><img src="/assets/images/dnaftb.jpg" alt=""></a> </figure> <h4><a href="http://www.dnaftb.org/">DNA from the Beginning</a></h4> <p class="text-small text-left">Discover the concepts and experiments that define the fields of genetics and molecular biology. This animated primer features the work of over 100 scientists and researchers.</p> <a href="http://www.dnaftb.org">LAUNCH <i class="icon-link"></i></a> <a href="/websites/dnaftb.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post laboratory-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="https://www.dnabarcoding101.org/"><img src="/assets/images/dna-barcoding-101.jpg" alt=""></a> </figure> <h4><a href="https://www.dnabarcoding101.org/">DNA Barcoding 101</a></h4> <p class="text-small text-left">DNA Barcoding 101 includes experimental methods and supporting resources for using DNA barcoding to identify plants or animals – or products made from them. The site is also the home base for teachers and mentors participating in DNALC student research programs, including <em><strong>Barcode Long Island</strong></em>, <em><strong>Urban Barcode Project</strong></em>, and the <em><strong>Urban Barcode Research Program</strong></em>.</p> <a href="https://www.dnabarcoding101.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/dnabarcoding101.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post bioinformatics-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="https://dnasubway.cyverse.org/"><img src="/assets/images/dna-subway.jpg" alt=""></a> </figure> <h4><a href="https://dnasubway.cyverse.org/"><em>DNA Subway</em></a></h4> <p class="text-small text-left">As a member of the NSF-funded <em>CyVerse</em> (<em>iPlant Collaborative</em>), the DNALC has developed <em>DNA Subway</em>, a bioinformatics workspace that makes high-level genome analysis broadly available to biology students and educators.</p> <a href="https://dnasubway.cyverse.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/dnasubway.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.dnai.org/"><img src="/assets/images/dnai.jpg" alt=""></a> </figure> <h4><a href="http://www.dnai.org/">DNA Interactive</a></h4> <h5 class="redtext" style="margin-top: 0;">[Flash emulator installed]</h5> <p class="text-small text-left">Celebrate the 50th anniversary of the discovery of the DNA structure and the development of "DNA science." A large collection of videos and interactive 3-D animations provides an enriching experience.</p> <a href="http://www.dnai.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/dnai.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.eugenicsarchive.org"><img src="/assets/images/eugenicsarchive.jpg" alt=""></a> </figure> <h4><a href="http://www.eugenicsarchive.org">Image Archive on the American Eugenics Movement</a></h4> <h5 class="redtext" style="margin-top: 0;">[Requires Flash. <span class="redtext" style="margin-top: 0;">Original </span>HTML-only, non-Flash version available]</h5> <p class="text-small text-left">Explore documents and photographs of the Eugenics movement from the early decades of the 20th century. Read annotated essays from social historians on subjects relating to the Eugenics movement. </p> <a href="http://www.eugenicsarchive.org">LAUNCH <i class="icon-link"></i></a> <a href="/websites/eugenics.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"><a href="http://www.g2conline.org/3dbrain/"><img src="/assets/images/websites/3d-brain.png" alt=""></a> </figure> <h4><a href="http://www.g2conline.org/3dbrain/">3D Brain </a><br> <span style="font-size: 10pt;">from Genes to Cognition Online</span></h4> <p class="text-small text-left">Although the <em>Genes to Cognition Online</em> website is retired, we have created a stand-alone page for the popular 3D Brain model. </p> <a href="http://www.g2conline.org/3dbrain/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/g2c.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="iicn-link post-media"> <a href="http://www.insidecancer.org"><img src="/assets/images/inside-cancer.jpg" alt=""></a> </figure> <h4><a href="http://www.insidecancer.org">Inside Cancer</a></h4> <h5 class="redtext" style="margin-top: 0;">[Flash emulator installed]</h5> <p class="text-small text-left">Learn more about the pathways that lead to cancer and the molecular basis of new diagnostics and treatments. Explore the biology of a cancer cell.</p> <a href="http://www.insidecancer.org">LAUNCH <i class="icon-link"></i></a> <a href="/websites/insidecancer.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.learnaboutsma.org"><img src="/assets/images/learn-about-sma.jpg" alt=""></a> </figure> <h4><a href="http://www.learnaboutsma.org">Learn About SMA</a></h4> <p class="text-small text-left">Learn About SMA, developed with support from the Spinal Muscular Atrophy Foundation, is a resource for SMA patients, families and researchers, including stories of living with SMA and the science behind emerging therapies.</p> <a href="http://www.learnaboutsma.org">LAUNCH <i class="icon-link"></i></a> <a href="/websites/learnaboutsma.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.weedtowonder.org/"><img src="/assets/images/weedtowonder.jpg" alt=""></a> </figure> <h4><a href="http://www.weedtowonder.org/">Weed to Wonder</a></h4> <h5 class="redtext" style="margin-top: 0;"><span class="redtext" style="margin-top: 0;">[Requires Flash. <span class="redtext" style="margin-top: 0;">Original </span>HTML-only, non-Flash version available]</span></h5> <p class="text-small text-left">A flexible "e-book" that can be viewed as a website, an app, or a printable PDF. The interactive e-book tells the story of the development of maize, from domestication, hybrid vigor, genome sequencing, and transposons, to genetic modification and biofortification of modern maize.</p> <a href="http://www.weedtowonder.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/w2w.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post educational-site"> <div class="post-content"> <figure class="icn-link post-media"><a href="http://www.ygyh.org"><img src="/assets/images/ygyh.jpg" alt=""></a> </figure> <h4><a href="http://www.ygyh.org">Your Genes, Your Health</a></h4> <h5 class="redtext" style="margin-top: 0;">[Flash emulator installed]</h5> <p class="text-small text-left">Get clear explanations on the cause, inheritance, and treatment of 15 common genetic disorders. Watch video interviews with clinicians, researchers, healthcare providers, and patients who talk about the disorders.</p> <a href="http://www.ygyh.org">LAUNCH <i class="icon-link"></i></a> <a href="/websites/ygyh.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post laboratory-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.geneticorigins.org/"><img src="/assets/images/genetic-origins.jpg" alt=""></a> </figure> <h4><a href="http://www.geneticorigins.org/">Genetic Origins</a></h4> <p class="text-small text-left">Find out what DNA tells us about human origins. Use your own DNA to explore relationships between different ethnic populations. Complete with laboratory protocols and information on how to send samples to the DNALC for sequencing.</p> <a href="http://www.geneticorigins.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/geneticorigins.html">LEARN MORE <i class="icon-right-open-mini"></i> </a> </div> </div>  <div class="post laboratory-site bioinformatics-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.rnaseqforthenextgeneration.org/"><img src="/assets/images/rna-seq.jpg" alt=""></a> </figure> <h4><a href="http://www.rnaseqforthenextgeneration.org/">RNA-Seq for the Next Generation</a></h4> <p class="text-small text-left">RNA-Seq for the Next Generation supports development of a sustainable infrastructure and training program to assist undergraduate faculty in integrating RNA-Seq sequence analysis into course-based and independent student research.</p> <a href="http://www.rnaseqforthenextgeneration.org/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/rnaseq.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> <div class="post bioinformatics-site"> <div class="post-content"> <figure class="icn-link post-media"> <a href="http://www.bioservers.org/bioserver/"><img src="/assets/images/bioservers.jpg" alt=""></a> </figure> <h4><a href="http://www.bioservers.org/bioserver/">BioServers</a></h4> <p class="text-small text-left">Analyze your DNA with the Dolan DNA Learning Center's bioinformatics tools. Compare your DNA with other humans and other species stored in a database maintained by the DNALC.</p> <a href="http://www.bioservers.org/bioserver/">LAUNCH <i class="icon-link"></i></a> <a href="/websites/bioservers.html">LEARN MORE <i class="icon-right-open-mini"></i></a> </div> </div> </div> </div> </div> </div> </div> </section> <section > <div class="container inner-top inner-bottom-sm" style="padding-top: 0;"> <div class="row"> <div class="col-md-8 col-sm-9 center-block text-center"> <header> <h2 style="padding-top: 20px;">Retired DNALC Websites</h2> <p>The DNALC websites below are no longer being updated or maintained. A few are available with a Flash emulator, but not all features will work. All other sites will be available until the underlying technology fails. <em>Dynamic Genes, Genes to Cognition, Lab Center, </em>and<em> Simple Mapper</em> are no longer available.</p> </header> </div> </div> </div> </section> <section> <div class="container inner-bottom"> <div class="row"> <div class="col-sm-12 portfolio inner-bottom-xs"> <ul class="isotope items col-4 gap"> <li class="item thumb"> <figcaption> <h5 class="text-center"><a href="http://bioinformatics.dnalc.org/"><em>DNALC Kits</em></a></h5> </figcaption> <div > <a href="http://bioinformatics.dnalc.org/"><img src="/assets/images/websites/dnalc-kits_screen.png" alt=""></a> </div> </li> <li class="item thumb"> <figcaption> <h5 class="text-center"><a href="http://www.dnai.org/geneboy/"><em>Geneboy</em></a></h5> </figcaption> <div > <a href="http://www.dnai.org/geneboy/"><img src="/assets/images/websites/geneboy_screen.png" alt=""></a> </div> </li> <li class="item thumb"> <figcaption> <h5 class="text-center"><a href="http://www.greenomes.org/"><em>Greenomes</em></a></h5> </figcaption> <div> <a href="http://www.greenomes.org/"><img src="/assets/images/websites/greenomes_screen.png" alt=""></a> </div> </li> <li class="item thumb"> <figcaption> <h5 class="text-center" style="color: #ccc"><a href="http://www.silencinggenomes.org/"><em>Silencing Genomes</em></a></h5> </figcaption> <div > <img src="/assets/images/websites/silencinggenomes_screen.png" alt=""> </div> </li> </ul> </div> </div> <div class="row"> <div class="col-sm-12 portfolio inner-bottom-xs"> <ul class="isotope items col-4 gap"> <li class="item thumb"> <figcaption> <h5 class="text-center" style="color: #ccc"><em>Dynamic Genes</em></h5> </figcaption> <div> <img src="/assets/images/websites/dynamicgenes_screen.png" alt=""> </div> </li> <li class="item thumb"> <figcaption> <h5 class="text-center" style="color: #ccc"><em>Genes to Cognition Online</em></h5> </figcaption> <div> <img src="/assets/images/websites/g2c.png" alt="">  </div> 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