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class="documents-container backbone-social-profile-documents" style="width: 100%;"><div class="u-taCenter"></div><div class="profile--tab_content_container js-tab-pane tab-pane active" id="all"><div class="profile--tab_heading_container js-section-heading" data-section="Papers" id="Papers"><h3 class="profile--tab_heading_container">Papers by Ferran Palero</h3></div><div class="js-work-strip profile--work_container" data-work-id="4105019"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105019/Palero_et_al_2011_JMBA"><img alt="Research paper thumbnail of Palero et al 2011 JMBA" class="work-thumbnail" src="https://attachments.academia-assets.com/31626170/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105019/Palero_et_al_2011_JMBA">Palero et al 2011 JMBA</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery research surveys in the western Mediterranean Sea in 2003 -2005. Nucleotide sequence analysis of the mitochondrial 16S rDNA gene allowed the final-stage phyllosoma of Scyllarus arctus to be identified among these larvae. Its morphology is described and illustrated. This constitutes the second complete description of a Scyllaridae phyllosoma with its specific identity being validated by molecular techniques (the first was S. pygmaeus). These results also solved a long lasting taxonomic anomaly of several species assigned to the ancient genus Phyllosoma Leach, 1814. Detailed examination indicated that the final-stage phyllosoma of S. arctus shows closer affinities with the American scyllarid Scyllarus depressus or with the Australian Scyllarus sp. b (sensu Phillips et al., 1981) than to its sympatric species S. pygmaeus. G.W. (1998) Accuracy and standardization of brachyuran larval descriptions. Invertebrate Reproduction and Development 33, 127-144. Costa O.G. and Costa A. (1840) Catalogo dei Crostacei del regno di Napoli. In Fauna del Regno di Napoli ossia Enumerazione di tutti gli animali che abitano le diverse regioni di questo regno e le acque che le bagnano contenente la descrizione de nuovi poco esattamente conosciuti. Coutures E. and Webber R. (2005) Phyllosoma and nisto stages of Scyllarinae sp. D (Crustacea: Decapoda: Scyllaridae) from the southwest lagoon of New Caledonia. Zootaxa 873, 1-20.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="13469e1b4b4a71c4cc2d94a3756e2f2b" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626170,"asset_id":4105019,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626170/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105019"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105019"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105019; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4105018"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105018/Palero_and_Abello_2007_Zootaxa"><img alt="Research paper thumbnail of Palero and Abello 2007 Zootaxa" class="work-thumbnail" src="https://attachments.academia-assets.com/31626173/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105018/Palero_and_Abello_2007_Zootaxa">Palero and Abello 2007 Zootaxa</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The external morphology of the first phyllosoma larva of the spiny lobster Palinurus mauritanicus...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The external morphology of the first phyllosoma larva of the spiny lobster Palinurus mauritanicus is described based on hatched larvae, and compared with those described in other Palinurids. This constitutes the first scanning electron microscopy description of a phyllosoma of the genus Palinurus and the first complete description of a phyllosoma stage of P. mauritanicus. The first phyllosoma larva of P. mauritanicus hatches in a very advanced stage, compared to other palinurid genera, which would allow it to stay in the plankton for a shorter period of time. We cannot point out any major morphological differences from the congeneric species Palinurus elephas, co-occurring in most of its distribution area. The first phyllosoma larva of P. mauritanicus can be differentiated from those described for the genus Panulirus as well as from those of Scyllarus and Scyllarides widely co-occurring in the distribution area of P. mauritanicus, by the pereiopods 4 and 5 being already present as small buds and by the long, non-setose exopod on pereiopod 3. The morphology and differential position of the chromatophores of the living animal are also described.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="9f03529f409f74b70b5cb7300dd87847" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626173,"asset_id":4105018,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626173/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105018"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105018"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105018; 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window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=4105017]").text(description); $(".js-view-count[data-work-id=4105017]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 4105017; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='4105017']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "09ec4a931569f031fa08e9b8f4226f26" } } $('.js-work-strip[data-work-id=4105017]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":4105017,"title":"Palero 2004 Ind Acuicola","internal_url":"https://www.academia.edu/4105017/Palero_2004_Ind_Acuicola","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626174,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626174/thumbnails/1.jpg","file_name":"Palero_2004_Ind._Acuicola.pdf","download_url":"https://www.academia.edu/attachments/31626174/download_file","bulk_download_file_name":"Palero_2004_Ind_Acuicola.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626174/Palero_2004_Ind._Acuicola-libre.pdf?1392422681=\u0026response-content-disposition=attachment%3B+filename%3DPalero_2004_Ind_Acuicola.pdf\u0026Expires=1740560866\u0026Signature=CRMJXNM9GQXcGNYnvvyZnYbXtX-4xCUIJuQ4--~PbDy9i7AA-w4jKpEAufz4Eeuh9da0C7wtCYgvK06cvw0GH3HFmIqf3oupmofEur6oKQW4tI~xTIxJRDR1UDMBkx4~1wOfe9I~EmRfGaopHx37XNwtDb~ooO9Nz9YBTE2ATFZUVqnjPvOIjfYeMSyYq294twaZBrvXeiVgS~YbzISP~gWn2of593uQIYrATsChIxmKK1pzIyII7dJvHnSiAChCy7jExKTM-Z1gOmtZto4KzPPBue2brLW3VwGna8FnYCTlZjYWEtCRdEaK2zrJtrskm0huhTwjUk1lr5GjZBv46Q__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4105016"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105016/El_cultivo_de_la_langosta_Un_reto_para_el_siglo_XXI_Ferr%C3%A1n_Palero_Pastor_Laboratorio_de_Biolog%C3%ADa_Marina_Facultat_de_Biolog%C3%ADa_Universitat_de_Valencia_Valencia_Resumen"><img alt="Research paper thumbnail of El cultivo de la langosta: Un reto para el siglo XXI Ferrán Palero Pastor Laboratorio de Biología Marina, Facultat de Biología, Universitat de Valencia (Valencia) Resumen" class="work-thumbnail" src="https://attachments.academia-assets.com/31626169/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105016/El_cultivo_de_la_langosta_Un_reto_para_el_siglo_XXI_Ferr%C3%A1n_Palero_Pastor_Laboratorio_de_Biolog%C3%ADa_Marina_Facultat_de_Biolog%C3%ADa_Universitat_de_Valencia_Valencia_Resumen">El cultivo de la langosta: Un reto para el siglo XXI Ferrán Palero Pastor Laboratorio de Biología Marina, Facultat de Biología, Universitat de Valencia (Valencia) Resumen</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">A lo largo de los últimos años, las poblaciones naturales de langosta se han visto diezmadas en d...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">A lo largo de los últimos años, las poblaciones naturales de langosta se han visto diezmadas en diversos países por causa de la sobreexplotación. El agotamiento de los recursos ha movido a científicos japoneses, australianos y neo-zelandeses a intentar cultivar esta especie en cautividad. En este artículo presentamos la situación actual de las investigaciones sobre el cultivo a gran escala de las larvas de langosta y realizamos nuevas propuestas para el futuro.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="a3152aa3f2813feae20ac4fb2e35d7d1" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626169,"asset_id":4105016,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626169/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105016"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105016"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105016; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=4105016]").text(description); $(".js-view-count[data-work-id=4105016]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 4105016; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='4105016']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "a3152aa3f2813feae20ac4fb2e35d7d1" } } $('.js-work-strip[data-work-id=4105016]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":4105016,"title":"El cultivo de la langosta: Un reto para el siglo XXI Ferrán Palero Pastor Laboratorio de Biología Marina, Facultat de Biología, Universitat de Valencia (Valencia) Resumen","internal_url":"https://www.academia.edu/4105016/El_cultivo_de_la_langosta_Un_reto_para_el_siglo_XXI_Ferr%C3%A1n_Palero_Pastor_Laboratorio_de_Biolog%C3%ADa_Marina_Facultat_de_Biolog%C3%ADa_Universitat_de_Valencia_Valencia_Resumen","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626169,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626169/thumbnails/1.jpg","file_name":"Palero_2004_CIVA.pdf","download_url":"https://www.academia.edu/attachments/31626169/download_file","bulk_download_file_name":"El_cultivo_de_la_langosta_Un_reto_para_e.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626169/Palero_2004_CIVA-libre.pdf?1392369975=\u0026response-content-disposition=attachment%3B+filename%3DEl_cultivo_de_la_langosta_Un_reto_para_e.pdf\u0026Expires=1740560866\u0026Signature=BoDDbRmYm6OUSflyRNGgYXHAMSsWfUM4JcMvVZ3VlEHbo2gH4DXusqiAqeurdtqP71En5PrO3cmsdlirUM68TiuOhhnjRCvJPuQ22RtHK9fzvOXTw2ir4Xhyb5BiPOCSCVef8oD9QhR6sZbXa2Wut56B6bJgAAPtaXP7tXoOOGZrViQvzlTC2FhRxxJwZrayNaX2ldqMMjbwSPAjUsSORugu7Ef7mV2RjVN1E1b7fviQmthW1ioCuGZpsC5T749M6VsOEdwNWJSN9~GjSz6Xd7WqE6UpGuRQkZyjR-nK~KjfWLJZGdpQkPVn0ZRAS5YB~pb~UMJhfKstmtdgx3MHYw__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4105015"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105015/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution"><img alt="Research paper thumbnail of The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution" class="work-thumbnail" src="https://attachments.academia-assets.com/31626171/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105015/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution">The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The order Decapoda represents a species-rich group of crustaceans. Numerous economically importan...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The order Decapoda represents a species-rich group of crustaceans. Numerous economically important and morphologically diverse members of this group have been studied extensively for many decades, in part to understand their phylogeny. There are several competing hypotheses concerning relationships among the major lineages of Decapoda. Our laboratories are estimating a robust decapod phylogeny based on molecular and morphological data in an attempt to resolve relationships among major lineages. The order includes roughly 175 families and more than 15,000 described species (extant and extinct). Interpretations are complicated by the estimated 437 million years since origin of the Decapoda, with all the major lineages likely established by 325 million years ago. Constructing a molecular phylogeny across such a timescale requires markers with enough variation to infer relationships at the fi ne scale (at and within the family level) but which are conservative enough to refl ect deeper divergences across infraorders. Here we present a molecular phylogeny for the order Decapoda, combining nuclear and mitochondrial sequences, to investigate relationships among nine pleocyemate infraorders, one dendrobranchiate superfamily, 56 families, 113 genera, and 128 species. New and available sequence data are assembled to build the most extensive decapod phylogeny to date both in terms of taxon representation and genetic coverage. We discuss current and new hypotheses of decapod relationships and suggest a plan for the movement towards a consensus of decapod evolution.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="d58df9485a32d096dac5796f8ee14f1b" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626171,"asset_id":4105015,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626171/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105015"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105015"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105015; 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Loci were developed for the following species: Brenthis ino, Cichla orinocensis, Cichla temensis, Epinephelus striatus, Gobio gobio, Liocarcinus depurator, Macrolophus pygmaeus, Monilinia vaccinii-corymbosi, Pelochelys cantorii, Philotrypesis josephi, Romanogobio vladykovi, Takydromus luyeanus and Takydromus viridipunctatus. These loci were cross-tested on the following species: Cichla intermedia, Cichla ocellaris, Cichla pinima, Epinephelus acanthistius, Gobio carpathicus, Gobio obtusirostris, Gobio sp. 1, Gobio volgensis, Macrolophus costalis, Macrolophus melanotoma, Macrolophus pygmaeus, Romanogobio albipinnatus, Romanogobio banaticus, Romanogobio belingi, Romanogobio kesslerii, Romanogobio parvus, Romanogobio pentatrichus, Romanogobio uranoscopus, Takydromus formosanus, Takydromus hsuehshanesis and Takydromus stejnegeri.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104953"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104953"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104953; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104950"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4104950/Phylogeographic_patterns_of_decapod_crustaceans_at_the_Atlantic_Mediterranean_transition"><img alt="Research paper thumbnail of Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition" class="work-thumbnail" src="https://attachments.academia-assets.com/31626196/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4104950/Phylogeographic_patterns_of_decapod_crustaceans_at_the_Atlantic_Mediterranean_transition">Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition</a></div><div class="wp-workCard_item"><span>Molecular phylogenetics and evolution</span><span>, 2012</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Comparative multispecies studies allow contrasting the effect of past and present oceanographic p...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Comparative multispecies studies allow contrasting the effect of past and present oceanographic processes on phylogeographic patterns. In the present study, a fragment of the COI gene was analyzed in seven decapod crustacean species from five families and with different bathymetric distributions. A total of 769 individuals were sampled along the Atlantic-Mediterranean transition area in order to test the effect of three putative barriers to gene flow: Strait of Gibraltar, Almeria-Oran Front and Ibiza Channel. A significant effect of the Strait of Gibraltar was found in the crabs Liocarcinus depurator and Macropipus tuberculatus. The Ibiza Channel had a significant effect for L. depurator. However, the Almeria-Oran front was not found to have a significant effect on any of the studied species. Higher levels of population structure were found in shallow-water species, although the number of species sampled should be increased to obtain a conclusive pattern. The haplotypes within the different species coalesced at times that could be related with past climatic events occurring before, during and after the last glacial maximum. Given the large diversity of phylogeographic patterns obtained within decapods, it is concluded that both historical and contemporary processes (marine current patterns, bathymetry and life-history traits) shape the phylogeographic patterns of these crustaceans.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="8228e320996a56c94740bee8872e31e4" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626196,"asset_id":4104950,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626196/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104950"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104950"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104950; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104938"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis"><img alt="Research paper thumbnail of The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis" class="work-thumbnail" src="https://attachments.academia-assets.com/31626200/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis">The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis</a></div><div class="wp-workCard_item"><span>Invertebrate Systematics</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">In 1885, Sarato created Nisto as a new genus of slipper lobster and assigned two species to his t...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">In 1885, Sarato created Nisto as a new genus of slipper lobster and assigned two species to his taxon, namely Nisto laevis and N. asper. Bouvier later regarded these two species as post-larval stages of Scyllarus arctus . This viewpoint of two post-larval stages has been accepted and retained, including being cited in the most recent scyllarid literature. The discovery of N. laevis and N. asper specimens in the reference collection of the Natural History Museum, London and the capture of three nisto-stage individuals, one in the north-western Mediterranean Sea and two in the Gulf of Cádiz (eastern Atlantic Ocean) have facilitated a historical review into the post-larval stages of S. arctus, as well as new detailed morphological descriptions. From the present study, it has been possible to describe and illustrate the nisto stages of S. arctus and S. pygmaeus and to resolve the true identities of N. laevis and N. asper by DNA analysis. Accordingly, N. laevis has been identified as the nisto stage of S. pygmaeus and N. asper as that of S. arctus.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="52ba0a161940ba48b002c28c28fbd6fc" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626200,"asset_id":4104938,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626200/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104938"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104938"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104938; 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dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "52ba0a161940ba48b002c28c28fbd6fc" } } $('.js-work-strip[data-work-id=4104938]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":4104938,"title":"The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis","internal_url":"https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626200,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626200/thumbnails/1.jpg","file_name":"Palero_et_al_2009_Inv._Syst..pdf","download_url":"https://www.academia.edu/attachments/31626200/download_file","bulk_download_file_name":"The_true_identities_of_the_slipper_lobst.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626200/Palero_et_al_2009_Inv._Syst.-libre.pdf?1390953458=\u0026response-content-disposition=attachment%3B+filename%3DThe_true_identities_of_the_slipper_lobst.pdf\u0026Expires=1740560866\u0026Signature=HNWdgp212ZrBnohJIT9M-U8ygEHEnwVCIBZI9D-Ii8cMqz7ZXaMhoA~9NqqpVZK8IsKCM9HHPtwtSkR-n1cGno7wOFu9iEPwd3HIjbuj7zMTBB70ucLKA5U~cvVxH~m9tzmojYvPV2zK6NtvVQnfNvEDnLAEK23MkC48e2Gc2CY4wBtT2PosLog5SvoEi3xO1KzdnuhevNetACsWDLniFXAn53Yzi7PvCbkPblu25ONaaHz31LKHNXEIu5EvFqYy9PIOGO8Z80gHC8LaRqSezZS4iGdgXRn0919EFfP6dm~EdGVKTMvxsafmJJa1FYKcSMN8Zgxb6ikjPWyR77xmsw__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481508"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" rel="nofollow" href="https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description"><img alt="Research paper thumbnail of Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description" class="work-thumbnail" src="https://a.academia-assets.com/images/blank-paper.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" rel="nofollow" href="https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description">Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description</a></div><div class="wp-workCard_item"><span>Journal of The Marine Biological Association of The United Kingdom</span><span>, 2010</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery research surveys in the western Mediterranean Sea in 20032005. Nucleotide sequence analysis of the mitochondrial 16S rDNA gene allowed the final-stage phyllosoma of ...</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481508"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481508"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481508; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481508]").text(description); $(".js-view-count[data-work-id=3481508]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481508; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481508']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (false){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "-1" } } $('.js-work-strip[data-work-id=3481508]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481508,"title":"Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description","internal_url":"https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481507"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences"><img alt="Research paper thumbnail of Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences" class="work-thumbnail" src="https://attachments.academia-assets.com/50266789/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences">Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences</a></div><div class="wp-workCard_item"><span>Infection Genetics and Evolution</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Porcine teschoviruses (PTVs) have been previously shown to be the most abundant cytopathic viruse...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Porcine teschoviruses (PTVs) have been previously shown to be the most abundant cytopathic viruses found in swine feces. In the present study, the diversity of PTVs was studied, using PTV isolates collected between 2004 and 2009 in a wide territory in Spain. In order to characterize genetically the isolates, phylogeny reconstructions were made using maximum likelihood and Bayesian inference methods, based on the 1D (VP1) gene, and including sequences available in public databases. The phylogenetic trees obtained indicated that PTVs present 12 main lineages, 11 corresponding to the PTV serotypes described to date, and one lineage distinct from the rest.The geographic distribution of the different lineages does not seem to be strongly associated to particular territories, and co-circulation of multiple lineages was found in the same geographic areas. Nevertheless, some spatial structuring of the viral populations studied is indicated by the differences found between Spanish samples with respect to other European countries. A coalescent-based approach indicated that mutation may have been the main factor in originating the genetic diversity observed in the VP1 gene region. This study revealed a high diversity of teschoviruses circulating in the pig populations studied, and showed that molecular analysis of the complete VP1 protein is a suitable method for the identification of members of the porcine teschovirus group. However, further analyses are needed to clarify the geographical structuring of the different PTV populations.► A high heterogeneity of teschoviruses was found in Spanish normal pig populations. ► A twelfth genotype, possibly representing a new “putative” serotype was identified. ► Co-circulation of different genotypes in the same populations was frequent. ► Some geographical differences between territories were discerned. ► Time to the most recent common ancestor for each clade was estimated.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="502b2b519febf3bb304e09ab77580b25" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":50266789,"asset_id":3481507,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/50266789/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481507"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481507"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481507; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481507]").text(description); $(".js-view-count[data-work-id=3481507]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481507; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481507']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "502b2b519febf3bb304e09ab77580b25" } } $('.js-work-strip[data-work-id=3481507]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481507,"title":"Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences","internal_url":"https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":50266789,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/50266789/thumbnails/1.jpg","file_name":"Analyzing_the_genetic_diversity_of_tesch20161112-29900-1x1edqi.pdf","download_url":"https://www.academia.edu/attachments/50266789/download_file","bulk_download_file_name":"Analyzing_the_genetic_diversity_of_tesch.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/50266789/Analyzing_the_genetic_diversity_of_tesch20161112-29900-1x1edqi-libre.pdf?1478950202=\u0026response-content-disposition=attachment%3B+filename%3DAnalyzing_the_genetic_diversity_of_tesch.pdf\u0026Expires=1740560866\u0026Signature=LWcznR0ud7SnFPrIFC-D7KbCFN6gNDyMJ1Ta4tRDgmGY9QKuTc1o0H8tVmY87emwfLW0ovGssUk2YBvRZHQKunjTb9zhXFvBwWBGq0kUWQZP7Ecn3aCGgR-VhA9lu6x1-EPTVf6qsE23OU82cOtsMrVAdtBBUv5VnnmDhJk647Z3qJxjDfqgGi11rNDsjeuyvT3vAFEmFZiHHjxV-H95KClLHt~~DVxhWAMWf4CyoEIU67~xpgTYmkK1yI-8wuBkbU-xXdTFa7cF3PLIldOVM4ByjgDWlWUTKRw9B8g6fIzBZ0p0XGrEonos8Lc2scs4lSI8I1cotTBFIudpdXuWWg__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481505"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481505/DNA_extraction_from_formalin_fixed_tissue_new_light_from_the_deep_sea"><img alt="Research paper thumbnail of DNA extraction from formalin-fixed tissue: new light from the deep sea" class="work-thumbnail" src="https://attachments.academia-assets.com/31626203/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481505/DNA_extraction_from_formalin_fixed_tissue_new_light_from_the_deep_sea">DNA extraction from formalin-fixed tissue: new light from the deep sea</a></div><div class="wp-workCard_item"><span>Scientia Marina</span><span>, 2010</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The present study is a follow-up on previously published protocols on the extraction of DNA from ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The present study is a follow-up on previously published protocols on the extraction of DNA from formalin-preserved samples. It is also discussed why, when using formalin-preserved specimens for molecular analyses, only a fraction of the amplifications are successful. DNA samples were separately extracted from ethanol and formalin-fixed tissue using methods based on Tetramethylsilane (TMS)-Chelex. It was found that amplification success does not depend on the dehydration step, or the removal of soluble PCR inhibitors as previously stated, and that DNA is not simply trapped in an indigestible matrix of cross-linked protein. Instead, amplification success was found to depend on the amount of unmodified DNA present in the extracted sample. Moreover, in order to optimise the effort when analysing formalinfixed samples, a staining method is presented which facilitates the targeting of samples with a high content of unmodified DNA.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="e99e45fcd8450c46e4bc1f775d8d7bf5" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626203,"asset_id":3481505,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626203/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481505"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481505"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481505; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481505]").text(description); $(".js-view-count[data-work-id=3481505]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481505; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481505']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "e99e45fcd8450c46e4bc1f775d8d7bf5" } } $('.js-work-strip[data-work-id=3481505]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481505,"title":"DNA extraction from formalin-fixed tissue: new light from the deep sea","internal_url":"https://www.academia.edu/3481505/DNA_extraction_from_formalin_fixed_tissue_new_light_from_the_deep_sea","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626203,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626203/thumbnails/1.jpg","file_name":"Palero_et_al_2008_Scientia_Marina.pdf","download_url":"https://www.academia.edu/attachments/31626203/download_file","bulk_download_file_name":"DNA_extraction_from_formalin_fixed_tissu.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626203/Palero_et_al_2008_Scientia_Marina-libre.pdf?1392452885=\u0026response-content-disposition=attachment%3B+filename%3DDNA_extraction_from_formalin_fixed_tissu.pdf\u0026Expires=1740560866\u0026Signature=c7PnRvGB~RsR5OUrjVLoncZMvhmW6XDuNRECtL2yMtqDxZpAnUp-DPBgTioRD4XVbZfmPo5xNQk14ZrCZ~K~TgcGef0yLCviPXR1pK2CjdQIxACnvH~UI88xlgoIbsmyMgmspwKj3IPqu1jbwVPkj~5pI7q56t4qRytr9ZRqB3eiL6w5hZoNZoW5umf1-rtdDGMVZwNOPGOCN~-MBQUXg-aQzEMXmT6a5zgcz063-PTX6nIMIf-LPUrMDukdeCnnmu52l4T1UZOWKYaEcPzhHLXpa7Rw0lLjFzVgmgepE8Vzbx1yX4pBG8~3sVQvVOIXfEwY3QsPNNtEhW6PEX569A__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481504"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481504/Isolation_and_characterization_of_microsatellite_loci_in_Palinurus_elephas"><img alt="Research paper thumbnail of Isolation and characterization of microsatellite loci in Palinurus elephas" class="work-thumbnail" src="https://attachments.academia-assets.com/31626204/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481504/Isolation_and_characterization_of_microsatellite_loci_in_Palinurus_elephas">Isolation and characterization of microsatellite loci in Palinurus elephas</a></div><div class="wp-workCard_item"><span>Molecular Ecology Resources</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The European spiny lobster (Palinurus elephas) mean annual catches have decreased alarmingly duri...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The European spiny lobster (Palinurus elephas) mean annual catches have decreased alarmingly during recent decades along its entire distribution area due to stock over-exploitation, which makes it a primary target for conservation plans. A total of 164 microsatellite loci were isolated from a genomic library of P. elephas enriched for CA, GA, CAA and GATA repeats. A total of 15 polymorphic loci have been screened in 48 individuals. High numbers of alleles per locus (averaging 20 ± 10.5) and observed heterozygosity (averaging 0.789 ± 0.197) have been detected. None of the pairs of loci showed significant linkage disequilibrium. Two of the loci (Pael1 and Pael2) showed significant departure from Hardy–Weinberg equilibrium in Sagres, while Pael38 showed significant departure in Tunis. These highly polymorphic markers will be useful in determining the spatial patterns of genetic diversity between and within populations of Palinurus elephas.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="a440fff0abf8fcef37c0a14de01e497a" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626204,"asset_id":3481504,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626204/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481504"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481504"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481504; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481504]").text(description); $(".js-view-count[data-work-id=3481504]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481504; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481504']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "a440fff0abf8fcef37c0a14de01e497a" } } $('.js-work-strip[data-work-id=3481504]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481504,"title":"Isolation and characterization of microsatellite loci in Palinurus elephas","internal_url":"https://www.academia.edu/3481504/Isolation_and_characterization_of_microsatellite_loci_in_Palinurus_elephas","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626204,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626204/thumbnails/1.jpg","file_name":"Palero_and_Pascual_2008_MER.pdf","download_url":"https://www.academia.edu/attachments/31626204/download_file","bulk_download_file_name":"Isolation_and_characterization_of_micros.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626204/Palero_and_Pascual_2008_MER-libre.pdf?1392463652=\u0026response-content-disposition=attachment%3B+filename%3DIsolation_and_characterization_of_micros.pdf\u0026Expires=1740560866\u0026Signature=dBwuEury0cBVxswJPEgu2zAjE-PboipxQUBSDGGmvGVcdreKfLjRkcIlTOGWSp3aHTAA26GwHQVoPVYdUT2H4Dm-ItvJt41oQKK5sgX8a4qcgqqT-2RDzE9tLbTPu~eCAHnK3FdsZ6eIya5OkeKTAg125qY13~HSwmr~WDsslaxQZRMnf~coX36qlmPZPy-r~83xDpOZkShKuAeFY5dCHWAg961QjS7lRwRCxHPFfwfHcdqm~WMYdoFyiIlaKo4S578KFduuSkaqPFm5B~jr0T9qnC2qLesZUAExeGd4Gyf1NVaX7MBz48KmegxRCsirMOAWmXh0kHilc02JXCvbBA__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481502"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data"><img alt="Research paper thumbnail of Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data" class="work-thumbnail" src="https://attachments.academia-assets.com/31626207/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data">Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data</a></div><div class="wp-workCard_item"><span>BMC Evolutionary Biology</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Background Molecular tools may help to uncover closely related and still diverging species from a...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Background Molecular tools may help to uncover closely related and still diverging species from a wide variety of taxa and provide insight into the mechanisms, pace and geography of marine speciation. There is a certain controversy on the phylogeography and speciation modes of species-groups with an Eastern Atlantic-Western Indian Ocean distribution, with previous studies suggesting that older events (Miocene) and/or more recent (Pleistocene) oceanographic processes could have influenced the phylogeny of marine taxa. The spiny lobster genus Palinurus allows for testing among speciation hypotheses, since it has a particular distribution with two groups of three species each in the Northeastern Atlantic (P. elephas, P. mauritanicus and P. charlestoni) and Southeastern Atlantic and Southwestern Indian Oceans (P. gilchristi, P. delagoae and P. barbarae). In the present study, we obtain a more complete understanding of the phylogenetic relationships among these species through a combined dataset with both nuclear and mitochondrial markers, by testing alternative hypotheses on both the mutation rate and tree topology under the recently developed approximate Bayesian computation (ABC) methods. Results Our analyses support a North-to-South speciation pattern in Palinurus with all the South-African species forming a monophyletic clade nested within the Northern Hemisphere species. Coalescent-based ABC methods allowed us to reject the previously proposed hypothesis of a Middle Miocene speciation event related with the closure of the Tethyan Seaway. Instead, divergence times obtained for Palinurus species using the combined mtDNA-microsatellite dataset and standard mutation rates for mtDNA agree with known glaciation-related processes occurring during the last 2 my. Conclusion The Palinurus speciation pattern is a typical example of a series of rapid speciation events occurring within a group, with very short branches separating different species. Our results support the hypothesis that recent climate change-related oceanographic processes have influenced the phylogeny of marine taxa, with most Palinurus species originating during the last two million years. The present study highlights the value of new coalescent-based statistical methods such as ABC for testing different speciation hypotheses using molecular data.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="688d6a67303b93b69c8c50def8793669" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626207,"asset_id":3481502,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626207/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481502"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481502"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481502; 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dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "688d6a67303b93b69c8c50def8793669" } } $('.js-work-strip[data-work-id=3481502]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481502,"title":"Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data","internal_url":"https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626207,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626207/thumbnails/1.jpg","file_name":"Palero_et_al._2009_BMC_Evol._Biol..pdf","download_url":"https://www.academia.edu/attachments/31626207/download_file","bulk_download_file_name":"Rapid_radiation_in_spiny_lobsters_Palinu.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626207/Palero_et_al._2009_BMC_Evol._Biol.-libre.pdf?1392371200=\u0026response-content-disposition=attachment%3B+filename%3DRapid_radiation_in_spiny_lobsters_Palinu.pdf\u0026Expires=1740560866\u0026Signature=GFWg7a1qqaA6zSetz7TQaMIB2d1rgWK5aMPTy2W~iSHBb5YGMDCEGTeg~S0ntNSDuP1TFHYxXoUhoGxQBWUx~L9F2Ad1R3b9mPq1mGVNwTT~x6-FtjTaT7O9mIsty~bO5qUYAFX2lu~-D2b60K3zdZPldu1-48hRC~n5L1gLF1yHkANw8N1nk8JYgU6i~MOudxJyB68cQhuhSc7TODUVzt6dAsjkaQb0zX8WwrwURNcfttmdN5GyR1dmM5fQQS9iKLewRxNM2csPp2s~Fg6CJdhsqOO1X6oF0LvxhfbqDm2RAZF41so5GvrPKGJq-rT0-Ug1hzgGbBlQ4oHPF-KI4w__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481501"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" rel="nofollow" href="https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis"><img alt="Research paper thumbnail of Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis" class="work-thumbnail" src="https://a.academia-assets.com/images/blank-paper.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" rel="nofollow" href="https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis">Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis</a></div><div class="wp-workCard_item"><span>Journal of Plankton Research</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The morphology of the final phyllosoma larval stage of the slipper lobster Scyllarus pygmaeus is ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The morphology of the final phyllosoma larval stage of the slipper lobster Scyllarus pygmaeus is described and illustrated based on larvae captured from Mediterranean waters and compared with those described in other Scyllaridae. These larvae were always found in deep waters ...</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481501"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481501"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481501; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481501]").text(description); $(".js-view-count[data-work-id=3481501]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481501; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481501']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (false){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "-1" } } $('.js-work-strip[data-work-id=3481501]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481501,"title":"Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis","internal_url":"https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481497"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481497/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution"><img alt="Research paper thumbnail of The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution" class="work-thumbnail" src="https://attachments.academia-assets.com/50266788/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481497/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution">The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The order Decapoda represents a species-rich group of crustaceans. Numerous economically importan...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The order Decapoda represents a species-rich group of crustaceans. Numerous economically important and morphologically diverse members of this group have been studied extensively for many decades, in part to understand their phylogeny. There are several competing hypotheses concerning relationships among the major lineages of Decapoda. Our laboratories are estimating a robust decapod phylogeny based on molecular and morphological data in an attempt to resolve relationships among major lineages. The order includes roughly 175 families and more than 15,000 described species (extant and extinct). Interpretations are complicated by the estimated 437 million years since origin of the Decapoda, with all the major lineages likely established by 325 million years ago. Constructing a molecular phylogeny across such a timescale requires markers with enough variation to infer relationships at the fi ne scale (at and within the family level) but which are conservative enough to refl ect deeper divergences across infraorders. Here we present a molecular phylogeny for the order Decapoda, combining nuclear and mitochondrial sequences, to investigate relationships among nine pleocyemate infraorders, one dendrobranchiate superfamily, 56 families, 113 genera, and 128 species. New and available sequence data are assembled to build the most extensive decapod phylogeny to date both in terms of taxon representation and genetic coverage. We discuss current and new hypotheses of decapod relationships and suggest a plan for the movement towards a consensus of decapod evolution.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="0fa8e9b9244d6f4905d6aaf95e722796" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":50266788,"asset_id":3481497,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/50266788/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481497"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481497"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481497; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481497]").text(description); $(".js-view-count[data-work-id=3481497]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481497; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481497']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481496"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481496/Phylogenetic_relationships_between_spiny_slipper_and_coral_lobsters_Crustacea_Decapoda_Achelata_"><img alt="Research paper thumbnail of Phylogenetic relationships between spiny, slipper and coral lobsters (Crustacea, Decapoda, Achelata)" class="work-thumbnail" src="https://attachments.academia-assets.com/31626210/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481496/Phylogenetic_relationships_between_spiny_slipper_and_coral_lobsters_Crustacea_Decapoda_Achelata_">Phylogenetic relationships between spiny, slipper and coral lobsters (Crustacea, Decapoda, Achelata)</a></div><div class="wp-workCard_item"><span>Molecular Phylogenetics and Evolution</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Molecular data can aid in the resolution of conflicting hypotheses generated through difficulties...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Molecular data can aid in the resolution of conflicting hypotheses generated through difficulties in the interpretation of morphological data and/or an incomplete fossil record. Moreover, the reconstruction of phylogenetic relationships using molecular data may help to trace back the origin of morphological innovations which had a major impact on the radiation of a taxonomical group. In this work, different nuclear (18S, 28S, and H3) and mitochondrial (16S and COI) gene regions were sequenced in a total of 35 Achelatan species to test conflicting hypotheses of evolutionary relationships within the Achelata infraorder and solve the taxonomic disagreements in the group. The combined molecular dataset strongly supports the hypothesis that Achelata is a monophyletic group composed of two main families: Palinuridae and Scyllaridae. Synaxidae is found to be a polyphyletic group, which should be included within Palinuridae. Consequently, our results indicate that the origin of the stridulating organ occurred only once during Achelata evolution. Finally, the two main clades found within the Scyllaridae are in agreement with previous inferences based on adult morphological data. The dating of divergence of Achelata obtained with a relaxed-clock model is compatible with previous hypotheses of a Triassic origin of the Achelata.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="2e45bb0db05439ff78a49839a9423431" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626210,"asset_id":3481496,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626210/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481496"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481496"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481496; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481496]").text(description); $(".js-view-count[data-work-id=3481496]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481496; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481496']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481495"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481495/Phylogeography_of_the_European_spiny_lobster_Palinurus_elephas_Influence_of_current_oceanographical_features_and_historical_processes"><img alt="Research paper thumbnail of Phylogeography of the European spiny lobster ( Palinurus elephas): Influence of current oceanographical features and historical processes" class="work-thumbnail" src="https://attachments.academia-assets.com/31229004/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481495/Phylogeography_of_the_European_spiny_lobster_Palinurus_elephas_Influence_of_current_oceanographical_features_and_historical_processes">Phylogeography of the European spiny lobster ( Palinurus elephas): Influence of current oceanographical features and historical processes</a></div><div class="wp-workCard_item"><span>Molecular Phylogenetics and Evolution</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The European spiny lobster (Palinurus elephas) is a suitable model organism to study the effects ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The European spiny lobster (Palinurus elephas) is a suitable model organism to study the effects of past history and current oceanographic processes on the genetic diversity and population structure of marine species with a long-lived larval phase. A portion of the COI gene was sequenced in 227 individuals from 11 localities, covering most of the present distribution of the species. Divergence was found between Atlantic and Mediterranean regions, which could be explained by restricted gene flow between populations. Moreover, a principal component analysis detected differences within basins. The existence of genetic differentiation between Brittany and Ireland-Scotland populations could be accounted for by the large effect of the Gulf Stream, while mesoscale processes suffered by the incoming Atlantic waters could be responsible of genetic differentiation within the Mediterranean. Furthermore, historical processes could be responsible for a reduction on the overall genetic variability of P. elephas. The haplotypic distribution found in P. elephas, with the presence of one abundant haplotype and a large number of closely related haplotypes, is typical of species experiencing reduction in variability and subsequent expansions. Climatic fluctuations related to glacial cycles could explain the present level of variability and nucleotide diversity found. Interestingly, these glacial events do not seem to have the same impact in other species of the same genus. Our results indicate that recent glacial events could have had a lower impact on Palinurus mauritanicus, a congeneric species that presents an overlapping distribution area but is found in cooler waters than P. elephas.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="6b555fc7ce94a188caf060528a345ca4" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31229004,"asset_id":3481495,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31229004/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481495"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481495"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481495; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> </div><div class="profile--tab_content_container js-tab-pane tab-pane" data-section-id="512974" id="papers"><div class="js-work-strip profile--work_container" data-work-id="4105019"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105019/Palero_et_al_2011_JMBA"><img alt="Research paper thumbnail of Palero et al 2011 JMBA" class="work-thumbnail" src="https://attachments.academia-assets.com/31626170/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105019/Palero_et_al_2011_JMBA">Palero et al 2011 JMBA</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery research surveys in the western Mediterranean Sea in 2003 -2005. Nucleotide sequence analysis of the mitochondrial 16S rDNA gene allowed the final-stage phyllosoma of Scyllarus arctus to be identified among these larvae. Its morphology is described and illustrated. This constitutes the second complete description of a Scyllaridae phyllosoma with its specific identity being validated by molecular techniques (the first was S. pygmaeus). These results also solved a long lasting taxonomic anomaly of several species assigned to the ancient genus Phyllosoma Leach, 1814. Detailed examination indicated that the final-stage phyllosoma of S. arctus shows closer affinities with the American scyllarid Scyllarus depressus or with the Australian Scyllarus sp. b (sensu Phillips et al., 1981) than to its sympatric species S. pygmaeus. G.W. (1998) Accuracy and standardization of brachyuran larval descriptions. Invertebrate Reproduction and Development 33, 127-144. Costa O.G. and Costa A. (1840) Catalogo dei Crostacei del regno di Napoli. In Fauna del Regno di Napoli ossia Enumerazione di tutti gli animali che abitano le diverse regioni di questo regno e le acque che le bagnano contenente la descrizione de nuovi poco esattamente conosciuti. Coutures E. and Webber R. (2005) Phyllosoma and nisto stages of Scyllarinae sp. D (Crustacea: Decapoda: Scyllaridae) from the southwest lagoon of New Caledonia. Zootaxa 873, 1-20.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="13469e1b4b4a71c4cc2d94a3756e2f2b" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626170,"asset_id":4105019,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626170/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105019"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105019"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105019; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4105018"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105018/Palero_and_Abello_2007_Zootaxa"><img alt="Research paper thumbnail of Palero and Abello 2007 Zootaxa" class="work-thumbnail" src="https://attachments.academia-assets.com/31626173/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105018/Palero_and_Abello_2007_Zootaxa">Palero and Abello 2007 Zootaxa</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The external morphology of the first phyllosoma larva of the spiny lobster Palinurus mauritanicus...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The external morphology of the first phyllosoma larva of the spiny lobster Palinurus mauritanicus is described based on hatched larvae, and compared with those described in other Palinurids. This constitutes the first scanning electron microscopy description of a phyllosoma of the genus Palinurus and the first complete description of a phyllosoma stage of P. mauritanicus. The first phyllosoma larva of P. mauritanicus hatches in a very advanced stage, compared to other palinurid genera, which would allow it to stay in the plankton for a shorter period of time. We cannot point out any major morphological differences from the congeneric species Palinurus elephas, co-occurring in most of its distribution area. The first phyllosoma larva of P. mauritanicus can be differentiated from those described for the genus Panulirus as well as from those of Scyllarus and Scyllarides widely co-occurring in the distribution area of P. mauritanicus, by the pereiopods 4 and 5 being already present as small buds and by the long, non-setose exopod on pereiopod 3. The morphology and differential position of the chromatophores of the living animal are also described.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="9f03529f409f74b70b5cb7300dd87847" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626173,"asset_id":4105018,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626173/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105018"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105018"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105018; 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El agotamiento de los recursos ha movido a científicos japoneses, australianos y neo-zelandeses a intentar cultivar esta especie en cautividad. En este artículo presentamos la situación actual de las investigaciones sobre el cultivo a gran escala de las larvas de langosta y realizamos nuevas propuestas para el futuro.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="a3152aa3f2813feae20ac4fb2e35d7d1" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626169,"asset_id":4105016,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626169/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105016"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105016"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105016; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4105015"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4105015/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution"><img alt="Research paper thumbnail of The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution" class="work-thumbnail" src="https://attachments.academia-assets.com/31626171/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4105015/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution">The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The order Decapoda represents a species-rich group of crustaceans. Numerous economically importan...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The order Decapoda represents a species-rich group of crustaceans. Numerous economically important and morphologically diverse members of this group have been studied extensively for many decades, in part to understand their phylogeny. There are several competing hypotheses concerning relationships among the major lineages of Decapoda. Our laboratories are estimating a robust decapod phylogeny based on molecular and morphological data in an attempt to resolve relationships among major lineages. The order includes roughly 175 families and more than 15,000 described species (extant and extinct). Interpretations are complicated by the estimated 437 million years since origin of the Decapoda, with all the major lineages likely established by 325 million years ago. Constructing a molecular phylogeny across such a timescale requires markers with enough variation to infer relationships at the fi ne scale (at and within the family level) but which are conservative enough to refl ect deeper divergences across infraorders. Here we present a molecular phylogeny for the order Decapoda, combining nuclear and mitochondrial sequences, to investigate relationships among nine pleocyemate infraorders, one dendrobranchiate superfamily, 56 families, 113 genera, and 128 species. New and available sequence data are assembled to build the most extensive decapod phylogeny to date both in terms of taxon representation and genetic coverage. We discuss current and new hypotheses of decapod relationships and suggest a plan for the movement towards a consensus of decapod evolution.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="d58df9485a32d096dac5796f8ee14f1b" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626171,"asset_id":4105015,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626171/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4105015"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4105015"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4105015; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104953"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" rel="nofollow" href="https://www.academia.edu/4104953/Permanent_genetic_resources_added_to_molecular_ecology_resources_database_1_April_2012_31_May_2012"><img alt="Research paper thumbnail of Permanent genetic resources added to molecular ecology resources database 1 April 2012 - 31 May 2012" class="work-thumbnail" src="https://a.academia-assets.com/images/blank-paper.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" rel="nofollow" href="https://www.academia.edu/4104953/Permanent_genetic_resources_added_to_molecular_ecology_resources_database_1_April_2012_31_May_2012">Permanent genetic resources added to molecular ecology resources database 1 April 2012 - 31 May 2012</a></div><div class="wp-workCard_item"><span>Molecular ecology resources</span><span>, 2012</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">This article documents the addition of 123 microsatellite marker loci to the Molecular Ecology Re...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">This article documents the addition of 123 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Brenthis ino, Cichla orinocensis, Cichla temensis, Epinephelus striatus, Gobio gobio, Liocarcinus depurator, Macrolophus pygmaeus, Monilinia vaccinii-corymbosi, Pelochelys cantorii, Philotrypesis josephi, Romanogobio vladykovi, Takydromus luyeanus and Takydromus viridipunctatus. These loci were cross-tested on the following species: Cichla intermedia, Cichla ocellaris, Cichla pinima, Epinephelus acanthistius, Gobio carpathicus, Gobio obtusirostris, Gobio sp. 1, Gobio volgensis, Macrolophus costalis, Macrolophus melanotoma, Macrolophus pygmaeus, Romanogobio albipinnatus, Romanogobio banaticus, Romanogobio belingi, Romanogobio kesslerii, Romanogobio parvus, Romanogobio pentatrichus, Romanogobio uranoscopus, Takydromus formosanus, Takydromus hsuehshanesis and Takydromus stejnegeri.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104953"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104953"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104953; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104951"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4104951/MICROSATELIGHT_pipeline_to_expedite_microsatellite_analysis"><img alt="Research paper thumbnail of MICROSATELIGHT--pipeline to expedite microsatellite analysis" class="work-thumbnail" src="https://attachments.academia-assets.com/31626192/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4104951/MICROSATELIGHT_pipeline_to_expedite_microsatellite_analysis">MICROSATELIGHT--pipeline to expedite microsatellite analysis</a></div><div class="wp-workCard_item"><span>The Journal of heredity</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="865cb49d3b0dde0bde3b17f6a4522bb8" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626192,"asset_id":4104951,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626192/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104951"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104951"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104951; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=4104951]").text(description); $(".js-view-count[data-work-id=4104951]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 4104951; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='4104951']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104950"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4104950/Phylogeographic_patterns_of_decapod_crustaceans_at_the_Atlantic_Mediterranean_transition"><img alt="Research paper thumbnail of Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition" class="work-thumbnail" src="https://attachments.academia-assets.com/31626196/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4104950/Phylogeographic_patterns_of_decapod_crustaceans_at_the_Atlantic_Mediterranean_transition">Phylogeographic patterns of decapod crustaceans at the Atlantic-Mediterranean transition</a></div><div class="wp-workCard_item"><span>Molecular phylogenetics and evolution</span><span>, 2012</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Comparative multispecies studies allow contrasting the effect of past and present oceanographic p...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Comparative multispecies studies allow contrasting the effect of past and present oceanographic processes on phylogeographic patterns. In the present study, a fragment of the COI gene was analyzed in seven decapod crustacean species from five families and with different bathymetric distributions. A total of 769 individuals were sampled along the Atlantic-Mediterranean transition area in order to test the effect of three putative barriers to gene flow: Strait of Gibraltar, Almeria-Oran Front and Ibiza Channel. A significant effect of the Strait of Gibraltar was found in the crabs Liocarcinus depurator and Macropipus tuberculatus. The Ibiza Channel had a significant effect for L. depurator. However, the Almeria-Oran front was not found to have a significant effect on any of the studied species. Higher levels of population structure were found in shallow-water species, although the number of species sampled should be increased to obtain a conclusive pattern. The haplotypes within the different species coalesced at times that could be related with past climatic events occurring before, during and after the last glacial maximum. Given the large diversity of phylogeographic patterns obtained within decapods, it is concluded that both historical and contemporary processes (marine current patterns, bathymetry and life-history traits) shape the phylogeographic patterns of these crustaceans.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="8228e320996a56c94740bee8872e31e4" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626196,"asset_id":4104950,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626196/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104950"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104950"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104950; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=4104950]").text(description); $(".js-view-count[data-work-id=4104950]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 4104950; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='4104950']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="4104938"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis"><img alt="Research paper thumbnail of The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis" class="work-thumbnail" src="https://attachments.academia-assets.com/31626200/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis">The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis</a></div><div class="wp-workCard_item"><span>Invertebrate Systematics</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">In 1885, Sarato created Nisto as a new genus of slipper lobster and assigned two species to his t...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">In 1885, Sarato created Nisto as a new genus of slipper lobster and assigned two species to his taxon, namely Nisto laevis and N. asper. Bouvier later regarded these two species as post-larval stages of Scyllarus arctus . This viewpoint of two post-larval stages has been accepted and retained, including being cited in the most recent scyllarid literature. The discovery of N. laevis and N. asper specimens in the reference collection of the Natural History Museum, London and the capture of three nisto-stage individuals, one in the north-western Mediterranean Sea and two in the Gulf of Cádiz (eastern Atlantic Ocean) have facilitated a historical review into the post-larval stages of S. arctus, as well as new detailed morphological descriptions. From the present study, it has been possible to describe and illustrate the nisto stages of S. arctus and S. pygmaeus and to resolve the true identities of N. laevis and N. asper by DNA analysis. Accordingly, N. laevis has been identified as the nisto stage of S. pygmaeus and N. asper as that of S. arctus.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="52ba0a161940ba48b002c28c28fbd6fc" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626200,"asset_id":4104938,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626200/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="4104938"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="4104938"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 4104938; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=4104938]").text(description); $(".js-view-count[data-work-id=4104938]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 4104938; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='4104938']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "52ba0a161940ba48b002c28c28fbd6fc" } } $('.js-work-strip[data-work-id=4104938]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":4104938,"title":"The true identities of the slipper lobsters Nisto laevis and Nisto asper (Crustacea: Decapoda: Scyllaridae) verified by DNA analysis","internal_url":"https://www.academia.edu/4104938/The_true_identities_of_the_slipper_lobsters_Nisto_laevis_and_Nisto_asper_Crustacea_Decapoda_Scyllaridae_verified_by_DNA_analysis","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626200,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626200/thumbnails/1.jpg","file_name":"Palero_et_al_2009_Inv._Syst..pdf","download_url":"https://www.academia.edu/attachments/31626200/download_file","bulk_download_file_name":"The_true_identities_of_the_slipper_lobst.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626200/Palero_et_al_2009_Inv._Syst.-libre.pdf?1390953458=\u0026response-content-disposition=attachment%3B+filename%3DThe_true_identities_of_the_slipper_lobst.pdf\u0026Expires=1740560866\u0026Signature=HNWdgp212ZrBnohJIT9M-U8ygEHEnwVCIBZI9D-Ii8cMqz7ZXaMhoA~9NqqpVZK8IsKCM9HHPtwtSkR-n1cGno7wOFu9iEPwd3HIjbuj7zMTBB70ucLKA5U~cvVxH~m9tzmojYvPV2zK6NtvVQnfNvEDnLAEK23MkC48e2Gc2CY4wBtT2PosLog5SvoEi3xO1KzdnuhevNetACsWDLniFXAn53Yzi7PvCbkPblu25ONaaHz31LKHNXEIu5EvFqYy9PIOGO8Z80gHC8LaRqSezZS4iGdgXRn0919EFfP6dm~EdGVKTMvxsafmJJa1FYKcSMN8Zgxb6ikjPWyR77xmsw__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481508"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" rel="nofollow" href="https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description"><img alt="Research paper thumbnail of Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description" class="work-thumbnail" src="https://a.academia-assets.com/images/blank-paper.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" rel="nofollow" href="https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description">Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description</a></div><div class="wp-workCard_item"><span>Journal of The Marine Biological Association of The United Kingdom</span><span>, 2010</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Advanced stages of Scyllarus phyllosoma larvae were collected by demersal trawling during fishery research surveys in the western Mediterranean Sea in 20032005. Nucleotide sequence analysis of the mitochondrial 16S rDNA gene allowed the final-stage phyllosoma of ...</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481508"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481508"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481508; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481508]").text(description); $(".js-view-count[data-work-id=3481508]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481508; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481508']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (false){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "-1" } } $('.js-work-strip[data-work-id=3481508]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481508,"title":"Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description","internal_url":"https://www.academia.edu/3481508/Scyllarus_arctus_Crustacea_Decapoda_Scyllaridae_final_stage_phyllosoma_identified_by_DNA_analysis_with_morphological_description","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481507"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences"><img alt="Research paper thumbnail of Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences" class="work-thumbnail" src="https://attachments.academia-assets.com/50266789/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences">Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences</a></div><div class="wp-workCard_item"><span>Infection Genetics and Evolution</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Porcine teschoviruses (PTVs) have been previously shown to be the most abundant cytopathic viruse...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Porcine teschoviruses (PTVs) have been previously shown to be the most abundant cytopathic viruses found in swine feces. In the present study, the diversity of PTVs was studied, using PTV isolates collected between 2004 and 2009 in a wide territory in Spain. In order to characterize genetically the isolates, phylogeny reconstructions were made using maximum likelihood and Bayesian inference methods, based on the 1D (VP1) gene, and including sequences available in public databases. The phylogenetic trees obtained indicated that PTVs present 12 main lineages, 11 corresponding to the PTV serotypes described to date, and one lineage distinct from the rest.The geographic distribution of the different lineages does not seem to be strongly associated to particular territories, and co-circulation of multiple lineages was found in the same geographic areas. Nevertheless, some spatial structuring of the viral populations studied is indicated by the differences found between Spanish samples with respect to other European countries. A coalescent-based approach indicated that mutation may have been the main factor in originating the genetic diversity observed in the VP1 gene region. This study revealed a high diversity of teschoviruses circulating in the pig populations studied, and showed that molecular analysis of the complete VP1 protein is a suitable method for the identification of members of the porcine teschovirus group. However, further analyses are needed to clarify the geographical structuring of the different PTV populations.► A high heterogeneity of teschoviruses was found in Spanish normal pig populations. ► A twelfth genotype, possibly representing a new “putative” serotype was identified. ► Co-circulation of different genotypes in the same populations was frequent. ► Some geographical differences between territories were discerned. ► Time to the most recent common ancestor for each clade was estimated.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="502b2b519febf3bb304e09ab77580b25" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":50266789,"asset_id":3481507,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/50266789/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481507"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481507"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481507; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481507]").text(description); $(".js-view-count[data-work-id=3481507]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481507; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481507']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "502b2b519febf3bb304e09ab77580b25" } } $('.js-work-strip[data-work-id=3481507]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481507,"title":"Analyzing the genetic diversity of teschoviruses in Spanish pig populations using complete VP1 sequences","internal_url":"https://www.academia.edu/3481507/Analyzing_the_genetic_diversity_of_teschoviruses_in_Spanish_pig_populations_using_complete_VP1_sequences","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":50266789,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/50266789/thumbnails/1.jpg","file_name":"Analyzing_the_genetic_diversity_of_tesch20161112-29900-1x1edqi.pdf","download_url":"https://www.academia.edu/attachments/50266789/download_file","bulk_download_file_name":"Analyzing_the_genetic_diversity_of_tesch.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/50266789/Analyzing_the_genetic_diversity_of_tesch20161112-29900-1x1edqi-libre.pdf?1478950202=\u0026response-content-disposition=attachment%3B+filename%3DAnalyzing_the_genetic_diversity_of_tesch.pdf\u0026Expires=1740560866\u0026Signature=LWcznR0ud7SnFPrIFC-D7KbCFN6gNDyMJ1Ta4tRDgmGY9QKuTc1o0H8tVmY87emwfLW0ovGssUk2YBvRZHQKunjTb9zhXFvBwWBGq0kUWQZP7Ecn3aCGgR-VhA9lu6x1-EPTVf6qsE23OU82cOtsMrVAdtBBUv5VnnmDhJk647Z3qJxjDfqgGi11rNDsjeuyvT3vAFEmFZiHHjxV-H95KClLHt~~DVxhWAMWf4CyoEIU67~xpgTYmkK1yI-8wuBkbU-xXdTFa7cF3PLIldOVM4ByjgDWlWUTKRw9B8g6fIzBZ0p0XGrEonos8Lc2scs4lSI8I1cotTBFIudpdXuWWg__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481505"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481505/DNA_extraction_from_formalin_fixed_tissue_new_light_from_the_deep_sea"><img alt="Research paper thumbnail of DNA extraction from formalin-fixed tissue: new light from the deep sea" class="work-thumbnail" src="https://attachments.academia-assets.com/31626203/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481505/DNA_extraction_from_formalin_fixed_tissue_new_light_from_the_deep_sea">DNA extraction from formalin-fixed tissue: new light from the deep sea</a></div><div class="wp-workCard_item"><span>Scientia Marina</span><span>, 2010</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The present study is a follow-up on previously published protocols on the extraction of DNA from ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The present study is a follow-up on previously published protocols on the extraction of DNA from formalin-preserved samples. It is also discussed why, when using formalin-preserved specimens for molecular analyses, only a fraction of the amplifications are successful. DNA samples were separately extracted from ethanol and formalin-fixed tissue using methods based on Tetramethylsilane (TMS)-Chelex. It was found that amplification success does not depend on the dehydration step, or the removal of soluble PCR inhibitors as previously stated, and that DNA is not simply trapped in an indigestible matrix of cross-linked protein. Instead, amplification success was found to depend on the amount of unmodified DNA present in the extracted sample. Moreover, in order to optimise the effort when analysing formalinfixed samples, a staining method is presented which facilitates the targeting of samples with a high content of unmodified DNA.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="e99e45fcd8450c46e4bc1f775d8d7bf5" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626203,"asset_id":3481505,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626203/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481505"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481505"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481505; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481504"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481504/Isolation_and_characterization_of_microsatellite_loci_in_Palinurus_elephas"><img alt="Research paper thumbnail of Isolation and characterization of microsatellite loci in Palinurus elephas" class="work-thumbnail" src="https://attachments.academia-assets.com/31626204/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481504/Isolation_and_characterization_of_microsatellite_loci_in_Palinurus_elephas">Isolation and characterization of microsatellite loci in Palinurus elephas</a></div><div class="wp-workCard_item"><span>Molecular Ecology Resources</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The European spiny lobster (Palinurus elephas) mean annual catches have decreased alarmingly duri...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The European spiny lobster (Palinurus elephas) mean annual catches have decreased alarmingly during recent decades along its entire distribution area due to stock over-exploitation, which makes it a primary target for conservation plans. A total of 164 microsatellite loci were isolated from a genomic library of P. elephas enriched for CA, GA, CAA and GATA repeats. A total of 15 polymorphic loci have been screened in 48 individuals. High numbers of alleles per locus (averaging 20 ± 10.5) and observed heterozygosity (averaging 0.789 ± 0.197) have been detected. None of the pairs of loci showed significant linkage disequilibrium. Two of the loci (Pael1 and Pael2) showed significant departure from Hardy–Weinberg equilibrium in Sagres, while Pael38 showed significant departure in Tunis. These highly polymorphic markers will be useful in determining the spatial patterns of genetic diversity between and within populations of Palinurus elephas.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="a440fff0abf8fcef37c0a14de01e497a" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626204,"asset_id":3481504,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626204/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481504"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481504"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481504; 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481502"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data"><img alt="Research paper thumbnail of Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data" class="work-thumbnail" src="https://attachments.academia-assets.com/31626207/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data">Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data</a></div><div class="wp-workCard_item"><span>BMC Evolutionary Biology</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Background Molecular tools may help to uncover closely related and still diverging species from a...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Background Molecular tools may help to uncover closely related and still diverging species from a wide variety of taxa and provide insight into the mechanisms, pace and geography of marine speciation. There is a certain controversy on the phylogeography and speciation modes of species-groups with an Eastern Atlantic-Western Indian Ocean distribution, with previous studies suggesting that older events (Miocene) and/or more recent (Pleistocene) oceanographic processes could have influenced the phylogeny of marine taxa. The spiny lobster genus Palinurus allows for testing among speciation hypotheses, since it has a particular distribution with two groups of three species each in the Northeastern Atlantic (P. elephas, P. mauritanicus and P. charlestoni) and Southeastern Atlantic and Southwestern Indian Oceans (P. gilchristi, P. delagoae and P. barbarae). In the present study, we obtain a more complete understanding of the phylogenetic relationships among these species through a combined dataset with both nuclear and mitochondrial markers, by testing alternative hypotheses on both the mutation rate and tree topology under the recently developed approximate Bayesian computation (ABC) methods. Results Our analyses support a North-to-South speciation pattern in Palinurus with all the South-African species forming a monophyletic clade nested within the Northern Hemisphere species. Coalescent-based ABC methods allowed us to reject the previously proposed hypothesis of a Middle Miocene speciation event related with the closure of the Tethyan Seaway. Instead, divergence times obtained for Palinurus species using the combined mtDNA-microsatellite dataset and standard mutation rates for mtDNA agree with known glaciation-related processes occurring during the last 2 my. Conclusion The Palinurus speciation pattern is a typical example of a series of rapid speciation events occurring within a group, with very short branches separating different species. Our results support the hypothesis that recent climate change-related oceanographic processes have influenced the phylogeny of marine taxa, with most Palinurus species originating during the last two million years. The present study highlights the value of new coalescent-based statistical methods such as ABC for testing different speciation hypotheses using molecular data.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="688d6a67303b93b69c8c50def8793669" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626207,"asset_id":3481502,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626207/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481502"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481502"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481502; 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dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "688d6a67303b93b69c8c50def8793669" } } $('.js-work-strip[data-work-id=3481502]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481502,"title":"Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data","internal_url":"https://www.academia.edu/3481502/Rapid_radiation_in_spiny_lobsters_Palinurus_spp_as_revealed_by_classic_and_ABC_methods_using_mtDNA_and_microsatellite_data","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":31626207,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/31626207/thumbnails/1.jpg","file_name":"Palero_et_al._2009_BMC_Evol._Biol..pdf","download_url":"https://www.academia.edu/attachments/31626207/download_file","bulk_download_file_name":"Rapid_radiation_in_spiny_lobsters_Palinu.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/31626207/Palero_et_al._2009_BMC_Evol._Biol.-libre.pdf?1392371200=\u0026response-content-disposition=attachment%3B+filename%3DRapid_radiation_in_spiny_lobsters_Palinu.pdf\u0026Expires=1740560866\u0026Signature=GFWg7a1qqaA6zSetz7TQaMIB2d1rgWK5aMPTy2W~iSHBb5YGMDCEGTeg~S0ntNSDuP1TFHYxXoUhoGxQBWUx~L9F2Ad1R3b9mPq1mGVNwTT~x6-FtjTaT7O9mIsty~bO5qUYAFX2lu~-D2b60K3zdZPldu1-48hRC~n5L1gLF1yHkANw8N1nk8JYgU6i~MOudxJyB68cQhuhSc7TODUVzt6dAsjkaQb0zX8WwrwURNcfttmdN5GyR1dmM5fQQS9iKLewRxNM2csPp2s~Fg6CJdhsqOO1X6oF0LvxhfbqDm2RAZF41so5GvrPKGJq-rT0-Ug1hzgGbBlQ4oHPF-KI4w__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481501"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" rel="nofollow" href="https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis"><img alt="Research paper thumbnail of Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis" class="work-thumbnail" src="https://a.academia-assets.com/images/blank-paper.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" rel="nofollow" href="https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis">Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis</a></div><div class="wp-workCard_item"><span>Journal of Plankton Research</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The morphology of the final phyllosoma larval stage of the slipper lobster Scyllarus pygmaeus is ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The morphology of the final phyllosoma larval stage of the slipper lobster Scyllarus pygmaeus is described and illustrated based on larvae captured from Mediterranean waters and compared with those described in other Scyllaridae. These larvae were always found in deep waters ...</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481501"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481501"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481501; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481501]").text(description); $(".js-view-count[data-work-id=3481501]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481501; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481501']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (false){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "-1" } } $('.js-work-strip[data-work-id=3481501]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481501,"title":"Morphology of the final stage phyllosoma larva of Scyllarus pygmaeus (Crustacea: Decapoda: Scyllaridae), identified by DNA analysis","internal_url":"https://www.academia.edu/3481501/Morphology_of_the_final_stage_phyllosoma_larva_of_Scyllarus_pygmaeus_Crustacea_Decapoda_Scyllaridae_identified_by_DNA_analysis","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481497"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481497/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution"><img alt="Research paper thumbnail of The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution" class="work-thumbnail" src="https://attachments.academia-assets.com/50266788/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481497/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution">The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution</a></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The order Decapoda represents a species-rich group of crustaceans. Numerous economically importan...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The order Decapoda represents a species-rich group of crustaceans. Numerous economically important and morphologically diverse members of this group have been studied extensively for many decades, in part to understand their phylogeny. There are several competing hypotheses concerning relationships among the major lineages of Decapoda. Our laboratories are estimating a robust decapod phylogeny based on molecular and morphological data in an attempt to resolve relationships among major lineages. The order includes roughly 175 families and more than 15,000 described species (extant and extinct). Interpretations are complicated by the estimated 437 million years since origin of the Decapoda, with all the major lineages likely established by 325 million years ago. Constructing a molecular phylogeny across such a timescale requires markers with enough variation to infer relationships at the fi ne scale (at and within the family level) but which are conservative enough to refl ect deeper divergences across infraorders. Here we present a molecular phylogeny for the order Decapoda, combining nuclear and mitochondrial sequences, to investigate relationships among nine pleocyemate infraorders, one dendrobranchiate superfamily, 56 families, 113 genera, and 128 species. New and available sequence data are assembled to build the most extensive decapod phylogeny to date both in terms of taxon representation and genetic coverage. We discuss current and new hypotheses of decapod relationships and suggest a plan for the movement towards a consensus of decapod evolution.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="0fa8e9b9244d6f4905d6aaf95e722796" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":50266788,"asset_id":3481497,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/50266788/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481497"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481497"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481497; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481497]").text(description); $(".js-view-count[data-work-id=3481497]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481497; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481497']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); dispatcherData = { dispatcher: window.WowProfile.dispatcher, downloadLinkId: "0fa8e9b9244d6f4905d6aaf95e722796" } } $('.js-work-strip[data-work-id=3481497]').each(function() { if (!$(this).data('initialized')) { new WowProfile.WorkStripView({ el: this, workJSON: {"id":3481497,"title":"The Decapod Tree of Life: Compiling the Data and Moving toward a Consensus of Decapod Evolution","internal_url":"https://www.academia.edu/3481497/The_Decapod_Tree_of_Life_Compiling_the_Data_and_Moving_toward_a_Consensus_of_Decapod_Evolution","owner_id":2804932,"coauthors_can_edit":true,"owner":{"id":2804932,"first_name":"Ferran","middle_initials":null,"last_name":"Palero","page_name":"FerranPalero","domain_name":"independent","created_at":"2012-11-23T23:47:15.505-08:00","display_name":"Ferran Palero","url":"https://independent.academia.edu/FerranPalero"},"attachments":[{"id":50266788,"title":"","file_type":"pdf","scribd_thumbnail_url":"https://attachments.academia-assets.com/50266788/thumbnails/1.jpg","file_name":"30964.pdf","download_url":"https://www.academia.edu/attachments/50266788/download_file","bulk_download_file_name":"The_Decapod_Tree_of_Life_Compiling_the_D.pdf","bulk_download_url":"https://d1wqtxts1xzle7.cloudfront.net/50266788/30964-libre.pdf?1478950204=\u0026response-content-disposition=attachment%3B+filename%3DThe_Decapod_Tree_of_Life_Compiling_the_D.pdf\u0026Expires=1740560866\u0026Signature=I1filIBl-g7jkn0BTt2RhwVmqz5SClLIaK2lQyMtw5t7C0MgRhXHnXbYB6gbhFLGWaDzh0N-sIBTe4~Ji0hW2XJR4LuvsyWZFYJXiaCocUTVR5sdX4p-HecZZ6v6Q0OxyU16e0-crVf1t3LS0SLwlQX8DveGf-C~~UJUbkz~6SToQnH821wJvWJK4VUcECKSgiAz3XM7O-zbmSeCBNHOocEC1iQTE2TpQClS4W1~lgj6smeAU3NxqPVnwWcFztL0ahp0bHgtEPwizEMg1kpy8gBuwVt1xeYb33ncQztGIKc653giWIIX1FtgXGw8tTFZq9PLp0JRw3l0nu78E~OIeQ__\u0026Key-Pair-Id=APKAJLOHF5GGSLRBV4ZA"}]}, dispatcherData: dispatcherData }); $(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481496"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481496/Phylogenetic_relationships_between_spiny_slipper_and_coral_lobsters_Crustacea_Decapoda_Achelata_"><img alt="Research paper thumbnail of Phylogenetic relationships between spiny, slipper and coral lobsters (Crustacea, Decapoda, Achelata)" class="work-thumbnail" src="https://attachments.academia-assets.com/31626210/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481496/Phylogenetic_relationships_between_spiny_slipper_and_coral_lobsters_Crustacea_Decapoda_Achelata_">Phylogenetic relationships between spiny, slipper and coral lobsters (Crustacea, Decapoda, Achelata)</a></div><div class="wp-workCard_item"><span>Molecular Phylogenetics and Evolution</span><span>, 2009</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">Molecular data can aid in the resolution of conflicting hypotheses generated through difficulties...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">Molecular data can aid in the resolution of conflicting hypotheses generated through difficulties in the interpretation of morphological data and/or an incomplete fossil record. Moreover, the reconstruction of phylogenetic relationships using molecular data may help to trace back the origin of morphological innovations which had a major impact on the radiation of a taxonomical group. In this work, different nuclear (18S, 28S, and H3) and mitochondrial (16S and COI) gene regions were sequenced in a total of 35 Achelatan species to test conflicting hypotheses of evolutionary relationships within the Achelata infraorder and solve the taxonomic disagreements in the group. The combined molecular dataset strongly supports the hypothesis that Achelata is a monophyletic group composed of two main families: Palinuridae and Scyllaridae. Synaxidae is found to be a polyphyletic group, which should be included within Palinuridae. Consequently, our results indicate that the origin of the stridulating organ occurred only once during Achelata evolution. Finally, the two main clades found within the Scyllaridae are in agreement with previous inferences based on adult morphological data. The dating of divergence of Achelata obtained with a relaxed-clock model is compatible with previous hypotheses of a Triassic origin of the Achelata.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="2e45bb0db05439ff78a49839a9423431" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31626210,"asset_id":3481496,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31626210/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481496"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481496"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481496; window.Academia.workViewCountsFetcher.queue(workId, function (count) { var description = window.$h.commaizeInt(count) + " " + window.$h.pluralize(count, 'View'); $(".js-view-count[data-work-id=3481496]").text(description); $(".js-view-count[data-work-id=3481496]").attr('title', description).tooltip(); }); });</script></span></span><span><span class="percentile-widget hidden"><span class="u-mr2x work-percentile"></span></span><script>$(function () { var workId = 3481496; window.Academia.workPercentilesFetcher.queue(workId, function (percentileText) { var container = $(".js-work-strip[data-work-id='3481496']"); container.find('.work-percentile').text(percentileText.charAt(0).toUpperCase() + percentileText.slice(1)); container.find('.percentile-widget').show(); container.find('.percentile-widget').removeClass('hidden'); }); });</script></span></div><div id="work-strip-premium-row-container"></div></div></div><script> require.config({ waitSeconds: 90 })(["https://a.academia-assets.com/assets/wow_profile-a9bf3a2bc8c89fa2a77156577594264ee8a0f214d74241bc0fcd3f69f8d107ac.js","https://a.academia-assets.com/assets/work_edit-ad038b8c047c1a8d4fa01b402d530ff93c45fee2137a149a4a5398bc8ad67560.js"], function() { // from javascript_helper.rb var dispatcherData = {} if (true){ window.WowProfile.dispatcher = window.WowProfile.dispatcher || _.clone(Backbone.Events); 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$(this).data('initialized', true); } }); $a.trackClickSource(".js-work-strip-work-link", "profile_work_strip") }); </script> <div class="js-work-strip profile--work_container" data-work-id="3481495"><div class="profile--work_thumbnail hidden-xs"><a class="js-work-strip-work-link" data-click-track="profile-work-strip-thumbnail" href="https://www.academia.edu/3481495/Phylogeography_of_the_European_spiny_lobster_Palinurus_elephas_Influence_of_current_oceanographical_features_and_historical_processes"><img alt="Research paper thumbnail of Phylogeography of the European spiny lobster ( Palinurus elephas): Influence of current oceanographical features and historical processes" class="work-thumbnail" src="https://attachments.academia-assets.com/31229004/thumbnails/1.jpg" /></a></div><div class="wp-workCard wp-workCard_itemContainer"><div class="wp-workCard_item wp-workCard--title"><a class="js-work-strip-work-link text-gray-darker" data-click-track="profile-work-strip-title" href="https://www.academia.edu/3481495/Phylogeography_of_the_European_spiny_lobster_Palinurus_elephas_Influence_of_current_oceanographical_features_and_historical_processes">Phylogeography of the European spiny lobster ( Palinurus elephas): Influence of current oceanographical features and historical processes</a></div><div class="wp-workCard_item"><span>Molecular Phylogenetics and Evolution</span><span>, 2008</span></div><div class="wp-workCard_item"><span class="js-work-more-abstract-truncated">The European spiny lobster (Palinurus elephas) is a suitable model organism to study the effects ...</span><a class="js-work-more-abstract" data-broccoli-component="work_strip.more_abstract" data-click-track="profile-work-strip-more-abstract" href="javascript:;"><span> more </span><span><i class="fa fa-caret-down"></i></span></a><span class="js-work-more-abstract-untruncated hidden">The European spiny lobster (Palinurus elephas) is a suitable model organism to study the effects of past history and current oceanographic processes on the genetic diversity and population structure of marine species with a long-lived larval phase. A portion of the COI gene was sequenced in 227 individuals from 11 localities, covering most of the present distribution of the species. Divergence was found between Atlantic and Mediterranean regions, which could be explained by restricted gene flow between populations. Moreover, a principal component analysis detected differences within basins. The existence of genetic differentiation between Brittany and Ireland-Scotland populations could be accounted for by the large effect of the Gulf Stream, while mesoscale processes suffered by the incoming Atlantic waters could be responsible of genetic differentiation within the Mediterranean. Furthermore, historical processes could be responsible for a reduction on the overall genetic variability of P. elephas. The haplotypic distribution found in P. elephas, with the presence of one abundant haplotype and a large number of closely related haplotypes, is typical of species experiencing reduction in variability and subsequent expansions. Climatic fluctuations related to glacial cycles could explain the present level of variability and nucleotide diversity found. Interestingly, these glacial events do not seem to have the same impact in other species of the same genus. Our results indicate that recent glacial events could have had a lower impact on Palinurus mauritanicus, a congeneric species that presents an overlapping distribution area but is found in cooler waters than P. elephas.</span></div><div class="wp-workCard_item wp-workCard--actions"><span class="work-strip-bookmark-button-container"></span><a id="6b555fc7ce94a188caf060528a345ca4" class="wp-workCard--action" rel="nofollow" data-click-track="profile-work-strip-download" data-download="{"attachment_id":31229004,"asset_id":3481495,"asset_type":"Work","button_location":"profile"}" href="https://www.academia.edu/attachments/31229004/download_file?s=profile"><span><i class="fa fa-arrow-down"></i></span><span>Download</span></a><span class="wp-workCard--action visible-if-viewed-by-owner inline-block" style="display: none;"><span class="js-profile-work-strip-edit-button-wrapper profile-work-strip-edit-button-wrapper" data-work-id="3481495"><a class="js-profile-work-strip-edit-button" tabindex="0"><span><i class="fa fa-pencil"></i></span><span>Edit</span></a></span></span></div><div class="wp-workCard_item wp-workCard--stats"><span><span><span class="js-view-count view-count u-mr2x" data-work-id="3481495"><i class="fa fa-spinner fa-spin"></i></span><script>$(function () { var workId = 3481495; 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