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AmiGO 2: Term Details for "transcription open complex formation at RNA polymerase II promoter" (GO:0001113)
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</p> --> <!-- <p> --> <!-- <a href="http://geneontology.org" class="navbar-link">GO</a> --> <!-- </p> --> </div> </div> </div> <!-- END template: header.tmpl --> <!-- START template: content_open.tmpl --> <div class="container amigo-ui-wide-max"> <!-- END template: content_open.tmpl --> <!-- START template: content_title.tmpl --> <div class="page-header"> <h1> transcription open complex formation at RNA polymerase II promoter</h1> </div> <!-- END template: content_title.tmpl --> <!-- START template: term_details.tmpl --> <!-- START: noscript_js_limited.tmpl --> <noscript> <div class="panel panel-warning"> <div class="panel-heading"> <h3 class="panel-title">Notice</h3> </div> <div class="panel-body"> <p> Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page. </p> </div> </div> </noscript> <!-- END: noscript-js-limited.tmpl --> <!-- START template: term_details_main.tmpl --> <div class="panel panel-default"> <div class="panel-heading"> <h3 class="panel-title"> Term Information <!-- Begin: abstract_help_link.tmpl --> <a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Term_Page" title="More information on using this page" class=""><span class="glyphicon glyphicon-question-sign"></span> </a> <!-- End: abstract_help_link.tmpl --> </h3> </div> <div class="panel-body"> <!-- <div style="padding-bottom: 3px;"> --> <div style="float:right;"> <a class="bbop-js-tooltip" title="Let us know if there are any additions, concerns, or other issues that you'd like to share about this data." href="http://help.geneontology.org"> <span class="label label-primary">Feedback <span class="glyphicon glyphicon-heart"></span> </span> </a> </div> <dl class="dl-horizontal amigo-detail-info"> <!-- Acc, name, and ont. --> <dt>Accession</dt> <dd>GO:0001113</dd> <dt>Name</dt> <dd>transcription open complex formation at RNA polymerase II promoter</dd> <dt>Ontology</dt> <dd>biological_process</dd> <!-- <dt>ID Space</dt> --> <!-- <dd>GO</dd> --> <!-- Synonyms --> <dt>Synonyms</dt> <dd id="syn-collapse-syn" class="syn-collapsible">RNA polymerase II promoter melting, transcriptional open complex formation at RNA polymerase II promoter</dd> <!-- Alternate IDs --> <dt>Alternate IDs</dt> <dd>None</dd> <!-- Definition --> <dt>Definition</dt> <dd>Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase II preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble. <em>Source:</em> <cite><a title="Go to PMID:15020047" href="http://www.ncbi.nlm.nih.gov/pubmed/15020047">PMID:15020047</a></cite>, <cite><a title="Go to PMID:18280161" href="http://www.ncbi.nlm.nih.gov/pubmed/18280161">PMID:18280161</a></cite>, <cite>GOC:txnOH</cite> </dd> <!-- Comment. --> <dt>Comment</dt> <dd>None</dd> <!-- Optional GO history. --> <dt>History</dt> <dd>See term <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001113#term=history" title="See term history.">history for GO:0001113</a> at QuickGO</dd> <!-- Taxon constraints. --> <!-- <dt>Taxon info</dt> --> <!-- --> <!-- <dd>None</dd> --> <!-- --> <!-- Chemical reaction participants. --> <dt>Chem. react.</dt> <dd>None</dd> <!-- Subsets --> <dt>Subset</dt> <dd>None</dd> <!-- JS dynamic links created by manager. --> <dt id="prob_related" class="hidden">Related</dt> <dd id="prob_bio" class="hidden"> <a id="prob_bio_href" href="#" class="btn btn-primary btn-xs">Link</a> to all <strong>genes and gene products</strong> annotated to transcription open complex formation at RNA polymerase II promoter (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann" class="hidden"> <a id="prob_ann_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations</strong> to transcription open complex formation at RNA polymerase II promoter (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann_dl" class="hidden"> <a id="prob_ann_dl_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations download</strong> (limited to first 10,000) for transcription open complex formation at RNA polymerase II promoter (<strong>excluding "regulates"</strong>). </dd> <!-- <\!-- -\-> --> <!-- <dt>Feedback</dt> --> <!-- <dd> --> <!-- Contact the --> <!-- <a href="http://help.geneontology.org" title="GO Helpdesk.">GO Helpdesk</a> --> <!-- if you find mistakes or have concerns --> <!-- about the data you find here. --> <!-- </dd> --> </dl> <div> <a href="/amigo/term/GO:0001113?relation=regulates" class="btn btn-primary"> Include "regulates"</a> <br />For more information, please see the <a href="http://geneontology.org/docs/ontology-relations/">ontology relation documentation</a>. </div> </div> </div> <!-- END template: term_details_main.tmpl --> <!-- Hrm... --> <!-- Display tabbing. --> <ul id="display-tabs" class="nav nav-tabs"> <!-- NOTE: As of RC3, "active" did not work, so still tabbed from JS. --> <!-- <li class="active"> --> <li> <a href="#display-associations-tab" data-toggle="tab">Annotations</a> </li> <li> <a href="#display-graphics-tab" data-toggle="tab">Graph Views</a> </li> <li> <a href="#display-lineage-tab" data-toggle="tab">Inferred Tree View</a> </li> <li> <!-- <a href="#display-sentences-tab" data-toggle="tab">Ancestors and Children</a> --> <a href="#display-sentences-tab" data-toggle="tab">Neighborhood</a> </li> <li> <a href="#display-xref-tab" data-toggle="tab">Mappings</a> </li> <!-- <li> --> <!-- <a href="#display-out-tab" data-toggle="tab">Other Views</a> --> <!-- </li> --> <!-- <li> --> <!-- <a href="#display-down-tab" data-toggle="tab">Downloads</a> --> <!-- </li> --> </ul> <div class="tab-content"> <!-- <div class="container"> --> <!-- </div> --> <div id="display-associations-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer amigo-live-search-results-unbounder"> <div class="panel-body"> <!-- START template: annotation_search.tmpl --> <div id="results-area" class="row"> <div class="col-xs-12 col-sm-12 col-md-3 col-lg-3"> <div> <h4>Filter results</h4> <div id="accordion" class="bbop-widget-set-live-filters"> Loading... </div> </div> </div> <div class="col-xs-12 col-sm-12 col-md-9 col-lg-9"> <div id="pager" class="bbop-widget-set-live-pager"></div> <div id="results" class="bbop-widget-set-live-results"> pending... </div> </div> </div> <!-- END template: annotation_search.tmpl --> </div> </div> </div> <div id="display-graphics-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_graphics.tmpl --> <h5> View this term in <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001113" title="Go to the QuickGO term page for GO:0001113">QuickGO</a>. </h5> <p> <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001113" title="Go to the QuickGO term page for GO:0001113"> <img src="https://amigo.geneontology.org/visualize?beta=0&mode=quickgo&inline=false&term=GO:0001113" alt="Graph of GO:0001113 from QuickGO" /> </a> </p> <h5>Additional external viewing options</h5> <ul class="list-unstyled"> <li><a href="http://ols.wordvis.com/q=GO:0001113" title="View the graph in the OLSVis viewer">OLSVis (interactive)</a></li> </ul> <h5>Additional internal viewing options</h5> <ul class="list-unstyled"> <!-- TODO: do this with breadcrumbsy string (taken from REST URL) --> <!-- <li>Last action: unknown</li> --> <li><a href="https://amigo.geneontology.org/visualize?format=png&term_data=GO%3A0001113&term_data_type=string&mode=amigo&inline=false" title="View the graph as a static PNG image">Graphical view (PNG)</a></li> <li><a href="https://amigo.geneontology.org/visualize?mode=amigo&term_data_type=string&inline=false&term_data=GO%3A0001113&format=svg" title="View the graph as an interactive SVG+JS document">Graphical view (SVG)</a></li> <!-- One day this will be out of experimental. --> <!-- <li><a href="" --> <!-- title="Navigate the GO, using the current term as a seed">GO Navigation</a></li> --> </ul> <!-- END template: term_details_graphics.tmpl --> </div> </div> </div> <div id="display-lineage-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_lineage.tmpl --> <!-- <h4>Term lineage for transcription open complex formation at RNA polymerase II promoter, including inferred links:</h4> --> <ul class="list-unstyled"> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113cca0)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0008150#display-lineage-tab" title="Go to biological_process">GO:0008150 biological_process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81137330)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009987#display-lineage-tab" title="Go to cellular process">GO:0009987 cellular process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a6d8)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0008152#display-lineage-tab" title="Go to metabolic process">GO:0008152 metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b811375a0)--> <!-- number_of_spaces = 1--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0044238#display-lineage-tab" title="Go to primary metabolic process">GO:0044238 primary metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81137438)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009058#display-lineage-tab" title="Go to biosynthetic process">GO:0009058 biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a3f0)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0071840#display-lineage-tab" title="Go to cellular component organization or biogenesis">GO:0071840 cellular component organization or biogenesis</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81137b70)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0043170#display-lineage-tab" title="Go to macromolecule metabolic process">GO:0043170 macromolecule metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a000)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006139#display-lineage-tab" title="Go to nucleobase-containing compound metabolic process">GO:0006139 nucleobase-containing compound metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113c808)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0016043#display-lineage-tab" title="Go to cellular component organization">GO:0016043 cellular component organization</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113c880)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009059#display-lineage-tab" title="Go to macromolecule biosynthetic process">GO:0009059 macromolecule biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a0f0)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0090304#display-lineage-tab" title="Go to nucleic acid metabolic process">GO:0090304 nucleic acid metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113aa68)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0034654#display-lineage-tab" title="Go to nucleobase-containing compound biosynthetic process">GO:0034654 nucleobase-containing compound biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a2a0)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0010467#display-lineage-tab" title="Go to gene expression">GO:0010467 gene expression</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81139d90)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0141187#display-lineage-tab" title="Go to nucleic acid biosynthetic process">GO:0141187 nucleic acid biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a108)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0043933#display-lineage-tab" title="Go to protein-containing complex organization">GO:0043933 protein-containing complex organization</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113d300)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0032774#display-lineage-tab" title="Go to RNA biosynthetic process">GO:0032774 RNA biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113cc88)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0016070#display-lineage-tab" title="Go to RNA metabolic process">GO:0016070 RNA metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81137a80)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006351#display-lineage-tab" title="Go to DNA-templated transcription">GO:0006351 DNA-templated transcription</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113cdc0)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0034367#display-lineage-tab" title="Go to protein-containing complex remodeling">GO:0034367 protein-containing complex remodeling</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a978)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0071824#display-lineage-tab" title="Go to protein-DNA complex organization">GO:0071824 protein-DNA complex organization</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b811374e0)--> <!-- number_of_spaces = 6--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006352#display-lineage-tab" title="Go to DNA-templated transcription initiation">GO:0006352 DNA-templated transcription initiation</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81137528)--> <!-- number_of_spaces = 6--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0001120#display-lineage-tab" title="Go to protein-DNA complex remodeling">GO:0001120 protein-DNA complex remodeling</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b811378b8)--> <!-- number_of_spaces = 6--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006366#display-lineage-tab" title="Go to transcription by RNA polymerase II">GO:0006366 transcription by RNA polymerase II</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113a090)--> <!-- number_of_spaces = 7--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0001112#display-lineage-tab" title="Go to DNA-templated transcription open complex formation">GO:0001112 DNA-templated transcription open complex formation</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8113aab0)--> <!-- number_of_spaces = 7--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[part_of relation]" title="part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006367#display-lineage-tab" title="Go to transcription initiation at RNA polymerase II promoter">GO:0006367 transcription initiation at RNA polymerase II promoter</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b81b7e548)--> <!-- number_of_spaces = 8--> <!-- override_image = https://amigo.geneontology.org/static/images/term_lineage_wedge.png--> <!-- override_title = Current term--> <!-- override_link = 1--> <!-- override_bold = 1--> <li> <img src="https://amigo.geneontology.org/static/images/term_lineage_wedge.png" alt="[Current term]" title="Current term" /> <span style="font-weight: bold;">GO:0001113 transcription open complex formation at RNA polymerase II promoter</span> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x564b8112d090)--> <!-- number_of_spaces = 9--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/regulates.gif" alt="[regulates relation]" title="regulates relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0001177#display-lineage-tab" title="Go to regulation of transcription open complex formation at RNA polymerase II promoter">GO:0001177 regulation of transcription open complex formation at RNA polymerase II promoter</a> </li> <!-- END template: term_details_entry.tmpl --> </ul> <!-- END template: term_details_lineage.tmpl --> </div> </div> </div> <div id="display-sentences-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_sentences.tmpl --> <h5 class="text-center"> Parents of transcription open complex formation at RNA polymerase II promoter (GO:0001113) </h5> <table id="all-table-above" class="table table-striped table-hover"> <!-- START template: term_details_neighborhood_head.tmpl --> <thead> <tr> <th style="width: 42%">subject<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by subject" alt="[Reorder by subject]" /></th> <th style="width: 16%">relation<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by relation" alt="[Reorder by relation]" /></th> <th style="width: 42%">object<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by object" alt="[Reorder by object]" /></th> </tr> </thead> <!-- END template: term_details_neighborhood_head.tmpl --> <tbody> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x564b81b7e548) --> <!-- object_chunk = HASH(0x564b81134e38) --> <!-- even_odd_rows = 0 --> <!-- munge_id_tail = _a --> <!-- count_type = object --> <tr class=""> <td> transcription open complex formation at RNA polymerase II promoter </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/BFO:0000050.gif" alt="[BFO:0000050 relation]" title="BFO:0000050 relation" /> BFO:0000050 </span> </td> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0006367" title="Go to transcription initiation at RNA polymerase II promoter">transcription initiation at RNA polymerase II promoter (GO:0006367)</a> </td> </tr> <!-- END template: term_details_re_row.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x564b81b7e548) --> <!-- object_chunk = HASH(0x564b8113d258) --> <!-- even_odd_rows = 1 --> <!-- munge_id_tail = _a --> <!-- count_type = object --> <tr class=""> <td> transcription open complex formation at RNA polymerase II promoter </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> is_a </span> </td> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0001112" title="Go to DNA-templated transcription open complex formation">DNA-templated transcription open complex formation (GO:0001112)</a> </td> </tr> <!-- END template: term_details_re_row.tmpl --> </tbody> </table> <h5 class="text-center"> Children of transcription open complex formation at RNA polymerase II promoter (GO:0001113) </h5> <table id="all-table-below" class="table table-striped table-hover"> <!-- START template: term_details_neighborhood_head.tmpl --> <thead> <tr> <th style="width: 42%">subject<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by subject" alt="[Reorder by subject]" /></th> <th style="width: 16%">relation<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by relation" alt="[Reorder by relation]" /></th> <th style="width: 42%">object<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by object" alt="[Reorder by object]" /></th> </tr> </thead> <!-- END template: term_details_neighborhood_head.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x564b81139e68) --> <!-- object_chunk = HASH(0x564b81b7e548) --> <!-- even_odd_rows = 2 --> <!-- munge_id_tail = _a --> <!-- count_type = subject --> <tr class=""> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0001177" title="Go to regulation of transcription open complex formation at RNA polymerase II promoter">regulation of transcription open complex formation at RNA polymerase II promoter (GO:0001177)</a> </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/RO:0002211.gif" alt="[RO:0002211 relation]" title="RO:0002211 relation" /> RO:0002211 </span> </td> <td> transcription open complex formation at RNA polymerase II promoter </td> </tr> <!-- END template: term_details_re_row.tmpl --> <tbody> </tbody> </table> <!-- END template: term_details_sentences.tmpl --> </div> </div> </div> <div id="display-xref-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_xrefs.tmpl --> <dd> <!-- <img height="16px" src="https://amigo.geneontology.org/static/images/gonuts.link.jpg" alt="GONUTS" /> --><small><strong>GONUTS</strong></small> <a href="" title="Community note for ">Add</a> usage comments for this term on the <abbr title="GO Normal Usage Tracking System" class="initialism">GONUTS</abbr> wiki. </dd> <!-- END template: term_details_xrefs.tmpl --> </div> </div> </div> </div> <!-- END template: term_details.tmpl --> <!-- Begin: footer.tmpl --> <!-- release_date = --> <!-- version = 2.5.17 --> <!-- VERSION = --> <hr> <footer> <div class="row"> <!-- Left. --> <div class="col-md-4"> <a href="https://geneontology.org/page/go-citation-policy#GO_Data" title="How to cite AmiGO data">Cite this data</a> • <a href="http://geneontology.org/page/use-and-license" title="Terms of use for the GO project">Terms of use</a> • <a href="http://help.geneontology.org" title="Contact 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