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KEGG T09220: PCO85_13840
<!doctype html> <html><head> <title>KEGG T09220: PCO85_13840</title> <link type="text/css" rel="stylesheet" href="/css/gn2.css?1740364292"> <link type="text/css" rel="stylesheet" href="/css/bget.css?1740364292"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <link type="text/css" rel="stylesheet" href="/css/bgetm.css?1740364292" media="only screen and (max-width: 768px)"> <style>.kcfd{display:none;}</style> <script> <!-- var getElementsByClassName = document.getElementsByClassName ? function (cl){ return document.getElementsByClassName(cl); } : function (cl){ var elms = []; var objs = document.getElementsByTagName('*'); for(var i=0;i<objs.length;i++){ var obj = objs[i]; if(obj.className == cl){ elms.push(obj); } } return elms; }; function toggleField(clk,cl,show,hide){ var objs = getElementsByClassName(cl); for(var i=0;i<objs.length;i++){ var obj = objs[i]; if(!obj.style.display||obj.style.display == 'none'){ obj.style.display = 'block'; clk.innerHTML = ' « '+hide; 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} } } function Link_XtrctSeq2(form) { var dna_from; var dna_to; var dna_len; var plus_up = Number(form.XtrctSeq_UP.value) ; var plus_down = Number(form.XtrctSeq_DOWN.value); var vector = Number(form.VECTOR.value); var org = form.ORG.value; var chr = form.CHR.value; var kid = form.KEGGID.value; var url; if (plus_up == 0 && plus_down == 0) { url = "/entry/-f+-n+n+" + kid; } else { if (vector == 1) { dna_from = Number(form.FROM.value) - plus_up; dna_to = Number(form.TO.value) + plus_down; } else { dna_from = Number(form.FROM.value) - plus_down; dna_to = Number(form.TO.value) + plus_up; } url = "/dbget-bin/cut_sequence_genes.pl?FROM=" + dna_from + "&TO=" + dna_to +"&VECTOR=" + vector + "&ORG=" + org; if (chr) url += "&CHR=" + chr; } //window.open( url, "_self" ); location.href = url; } function go_taxonomy(form,params){ for(var key in params){ if(form[key]){ form.setAttribute(key,params[key]); } else{ var obj = document.createElement('input'); obj.setAttribute('type','hidden'); obj.setAttribute('name',key); obj.setAttribute('value',params[key]); form.appendChild(obj); } } form.submit(); } window.onload=function(){window.focus();init();}; //---> </script> </head> <body> <div> <table border=0 cellpadding=0 cellspacing=0><tr><td> <table border=0 cellpadding=0 cellspacing=0 width="650"><tr><td width=70><a href="/kegg/kegg2.html"><img align="middle" alt="KEGG" border=0 src="/Fig/bget/kegg1.gif"></a></td><td> </td><td><a name="prod:PCO85_13840"></a><font class="title1">Prodigiosinella aquatilis: PCO85_13840</font></td><td class="tar vbot"><button class="btn" onclick="javascript:void(window.open('/kegg/document/help_bget_genes.html','KEGG_Help','toolbar=no,location=no,directories=no,width=720,height=640,resizable=yes,scrollbars=yes'));return false;">Help</button></td></tr></table><form method="post" action="javascript:Link_XtrctSeq2(document.form1);" enctype="application/x-www-form-urlencoded" id="form1" name="form1"><input type="hidden" name="ACCESSION" value="PCO85_13840" > <input type="hidden" name="KEGGID" value="prod:PCO85_13840" > <input type="hidden" name="ORG" value="prod" > <input type="hidden" name="FROM" value="2986957" > <input type="hidden" name="TO" value="2987826" > <input type="hidden" name="VECTOR" value="1" > <input type="hidden" name="CHR" value="" > <input type="hidden" name="source" value="OPEN" > <input type="hidden" name="pos" value="2986957..2987826" > </form><table class="w1" width="650"> <tr> <td class="fr1 w1"> <table width="650" class="w2"> <tr><th class="th10 deft tal vmid"><span class="nowrap">Entry</span></th> <td class="td10 defd"><table class="w1" width="100%"><tr><td class="tal pd0"><code><span class="nowrap">PCO85_13840 CDS <a href="/kegg-bin/show_organism?org=T09220">T09220</a> <br> </span></code></td></tr></table></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Name</span></th> <td class="td11 defd"><div class="cel"><div class="cel">(GenBank) alpha/beta fold hydrolase<br> </div></div></td></tr> <tr><th class="th10 rept tal vtop"><span class="nowrap"> KO</span></th> <td class="td10 repd"><div class="cel"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/entry/K05714">K05714</a> </span></td><td>2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:<a href="/entry/3.7.1.14">3.7.1.14</a>]</td></tr></table></div></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Organism</span></th> <td class="td11 defd"><div class="cel"><a href="/kegg-bin/show_organism?org=prod">prod</a> Prodigiosinella aquatilis<br> </div></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Pathway</span></th> <td class="td10 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/prod00360+PCO85_13840">prod00360</a> </span></td><td>Phenylalanine metabolism</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/prod01100+PCO85_13840">prod01100</a> </span></td><td>Metabolic pathways</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/prod01120+PCO85_13840">prod01120</a> </span></td><td>Microbial metabolism in diverse environments</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/prod01220+PCO85_13840">prod01220</a> </span></td><td>Degradation of aromatic compounds</td></tr></table></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Module</span></th> <td class="td11 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/prod_M00545+PCO85_13840">prod_M00545</a> </span></td><td>Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA</td></tr></table></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Brite</span></th> <td class="td10 defd"><div class="cel"><span class="nowrap">KEGG Orthology (KO) [BR:<a href="/brite/prod00001+PCO85_13840">prod00001</a>]<br> 09100 Metabolism<br> 09105 Amino acid metabolism<br> 00360 Phenylalanine metabolism<br> PCO85_13840<br> Enzymes [BR:<a href="/brite/prod01000+PCO85_13840">prod01000</a>]<br> 3. Hydrolases<br> 3.7 Acting on carbon-carbon bonds<br> 3.7.1 In ketonic substances<br> 3.7.1.14 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase<br> PCO85_13840<br> </span></div><button class="btn" onclick="location.href='https://www.kegg.jp/kegg-bin/search_brite?option=-a&search_string=PCO85_13840&prefix=prod';return false;">BRITE hierarchy</button></td></tr> <tr><th class="th11 deft tal vmid"><span class="nowrap">SSDB</span></th> <td class="td11 defd"><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_best?org_gene=prod:PCO85_13840';return false;">Ortholog</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_paralog?org_gene=prod:PCO85_13840';return false;">Paralog</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_gclust?org_gene=prod:PCO85_13840';return false;">Gene cluster</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/www_ssget?prod:PCO85_13840';return false;">GFIT</button></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Motif</span></th> <td class="td10 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap">Pfam: </span></td><td><a href="/entry/pf:Abhydrolase_1">Abhydrolase_1</a> <a href="/entry/pf:Abhydrolase_6">Abhydrolase_6</a> <a href="/entry/pf:Hydrolase_4">Hydrolase_4</a> <a href="/entry/pf:Peptidase_S9">Peptidase_S9</a> <a href="/entry/pf:Abhydrolase_11">Abhydrolase_11</a> <a href="/entry/pf:BD-FAE">BD-FAE</a> <a href="/entry/pf:Abhydrolase_4">Abhydrolase_4</a> <a href="/entry/pf:DUF1057">DUF1057</a> <a href="/entry/pf:DUF915">DUF915</a> <a href="/entry/pf:Esterase">Esterase</a> <a href="/entry/pf:Ndr">Ndr</a> <a href="/entry/pf:Abhydrolase_3">Abhydrolase_3</a></td></tr></table><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_motif?kid=prod:PCO85_13840';return false;">Motif</button></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Other DBs</span></th> <td class="td11 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap">NCBI-ProteinID: </span></td><td><a href="https://www.ncbi.nlm.nih.gov/protein/WJV52323">WJV52323</a></td></tr></table></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Position</span></th> <td class="td10 defd"><div class="cel">2986957..2987826<br> </div><button class="btn" onclick="window.open('/genome/prod+PCO85_13840','_blank');return false;">Genome browser</button></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">AA seq</span></th> <td class="td11 defd">289 aa <button class="btn" onclick="location.href='/entry/-f+-n+a+prod:PCO85_13840';return false;">AA seq</button><button class="btn" onclick="location.href='/tools-bin/search_sequence?prog=blast&seqid=prod:PCO85_13840+aa';return false;">DB search</button><br> MNTQLSFNEAETSHFVDVEENGQHLRIHYNDCGSGKETVVMLHGSGPGATGWANFSRNID<br> PLVMAGYRVLLLDCPGWGKSDSIVNTGSRADLNARVLKQVIDHLDIEKVHLLGNSMGGHS<br> AVAFTLSWPERTGKLVLMGGGTGGMSLFTPMPTEGIKRLQALYREPNIDNLKAMMDIFVF<br> DTRDLTDTLFKTRLDNMLAHRDHLENFIKSSEANPKQFPDFTPRLNEISAPTLIIWGRND<br> RFVPMDAGLRLLSGIPGSQLHIFRDCGHWAQWEHADTFNRMVVDFLAHA</td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">NT seq</span></th> <td class="td10 defd">870 nt <button class="btn" form="form1">NT seq</button><code> +upstream<input type="text" name="XtrctSeq_UP" value="0" size="3" form="form1">nt +downstream<input type="text" name="XtrctSeq_DOWN" value="0" size="3" form="form1">nt</code><br> atgaacacacaattgtctttcaacgaagcagaaaccagtcattttgttgatgtagaagaa<br> aatggccagcatctgcgtattcattacaacgactgtggcagcggcaaagaaacggtcgtg<br> atgttacatggctcgggtccaggggcaaccggctgggcgaacttcagccgcaacatcgac<br> ccgctggtaatggccggttaccgggtcctgttgttggactgcccaggttggggtaagagt<br> gattcgattgtgaacacgggatctcgcgcagatctcaatgcccgagtgctgaaacaggtg<br> atcgatcacctggatatcgagaaagtgcatctccttggcaactccatgggcggacacagt<br> gcggtggcgtttaccctcagttggcctgaacgtaccggcaagctggtattaatggggggc<br> ggtaccggtggtatgagcctgtttacgcccatgccgacggaagggatcaagcgcttacaa<br> gcgttgtatcgggaaccgaacatcgacaacctgaaagcgatgatggatatttttgtcttc<br> gacacccgcgatttgacagacaccctgtttaagacccggctcgacaatatgctggctcat<br> cgtgatcatctggaaaactttatcaaaagtagcgaagccaacccgaaacaattcccggac<br> ttcaccccccgactaaatgaaatcagtgcgccgacactgattatctggggccgtaatgac<br> cgttttgtgcccatggatgccgggctgcgtttactttccggaataccgggatcacagttg<br> cacattttccgcgattgcggtcactgggctcagtgggaacacgccgacaccttcaaccgc<br> atggttgttgattttctggcccacgcataa</td></tr> </table></td></tr></table> <br></td><td class="vtop"><div class="aw" style="margin-top:46px;"><div class="fm at th10"> All links </div> <div class="fm"><pre class="fm" style="margin-left:1em"> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+1+prod:PCO85_13840">Ontology (2)</a></span> <a href="/dbget-bin/get_linkdb?-t+brite+prod:PCO85_13840">KEGG BRITE (2)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+2+prod:PCO85_13840">Pathway (5)</a></span> <a href="/dbget-bin/get_linkdb?-t+pathway+prod:PCO85_13840">KEGG PATHWAY (4)</a> <a href="/dbget-bin/get_linkdb?-t+module+prod:PCO85_13840">KEGG MODULE (1)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+6+prod:PCO85_13840">Chemical substance (6)</a></span> <a href="/dbget-bin/get_linkdb?-t+compound+prod:PCO85_13840">KEGG COMPOUND (6)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+7+prod:PCO85_13840">Chemical reaction (3)</a></span> <a href="/dbget-bin/get_linkdb?-t+enzyme+prod:PCO85_13840">KEGG ENZYME (1)</a> <a href="/dbget-bin/get_linkdb?-t+reaction+prod:PCO85_13840">KEGG REACTION (2)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+8+prod:PCO85_13840">Genome (1)</a></span> <a href="/dbget-bin/get_linkdb?-t+genome+prod:PCO85_13840">KEGG GENOME (1)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+9+prod:PCO85_13840">Gene (2)</a></span> <a href="/dbget-bin/get_linkdb?-t+orthology+prod:PCO85_13840">KEGG ORTHOLOGY (1)</a> <a href="/dbget-bin/get_linkdb?-t+ncbi-proteinid+prod:PCO85_13840">NCBI-PROTEINID (1)</a> <span style="color:#006"><a href="/dbget-bin/get_linkdb?-t+13+prod:PCO85_13840">Protein domain (12)</a></span> <a href="/dbget-bin/get_linkdb?-t+pfam+prod:PCO85_13840">Pfam (12)</a> <a href="/dbget-bin/get_linkdb?-t+alldb+prod:PCO85_13840">All databases (31)</a> <br><a href="/dbget-bin/get_linkdb?-N+prod:PCO85_13840">Download RDF</a> </pre> </div></div> </td></tr></table> <a href="/dbget/">DBGET</a> integrated database retrieval system</div> </body> </html>