PDB-101: About PDB-101

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The diverse shapes and functions of biological macromolecules help explain all aspects of biomedicine and agriculture, from protein synthesis to health and disease to biological energy.</p> <p>Our mission is to build and support the broad PDB user community with a wide range of resources for understanding 3D biostructures. <ul> <li>Training materials, such as the <a href="https://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/introduction" target="_blank">Guide to Understanding PDB Data</a> and webinars, are available to help graduate students, postdoctoral scholars, and researchers use PDB data and RCSB PDB tools.</li> <li>Outreach content, including the <a href="https://pdb101.rcsb.org/motm/motm-about" target="_blank">Molecule of the Month</a> series and <a href="https://pdb101.rcsb.org/learn/videos" arget="_blank">molecular animations</a>, demonstrate how PDB data can be used to understand fundamental biology, biomedicine, bioengineering/biotechnology, and energy sciences in 3D by a diverse and multidisciplinary user community.</li> <li>Education Materials, such as <a href="https://pdb101.rcsb.org/teach/overview" target="_blank">Curriculum Modules</a>, provide lessons and activities for teaching and learning.</li> </ul> </p> <p>Why PDB-101? Researchers around the world are studying molecules at the atomic level. These 3D structures are freely available at the Protein Data Bank (PDB), the central storehouse of biomolecular structures. This website builds introductory materials to help users get started using PDB data and RCSB PDB tools for learning ("101", as in an entry-level course).</p> <p>Since 2011, PDB-101 has been developed by RCSB PDB, a global resource for the advancement of research and education in biology and medicine. Along with our Worldwide PDB collaborators, RCSB PDB curates, annotates, and makes publicly available the PDB data deposited by scientists around the globe. The RCSB PDB then provides a window to these data through a rich online resource with powerful searching, reporting, and visualization tools for researchers at <a href="https://www.rcsb.org/" target="_blank">RCSB.org</a>. This information is then streamlined into Training, Outreach, and Education resources and materials at PDB-101.</p> <p>RCSB PDB Core Operations are funded by the <a href="http://www.nsf.gov/" target="_blank">U.S. National Science Foundation</a> (DBI-2321666), the <a href="http://science.energy.gov/" target="_blank">US Department of Energy</a> (DE-SC0019749), and the <a href="http://www.cancer.gov/" target="_blank">National Cancer Institute</a>, <a href="http://www.niaid.nih.gov/" target="_blank">National Institute of Allergy and Infectious Diseases</a>, and <a href="http://www.nigms.nih.gov/" target="_blank">National Institute of General Medical Sciences</a> of the <a href="http://www.nih.gov/" target="_blank">National Institutes of Health</a> under grant R01GM157729.</p> <p>RCSB PDB receives guidance from an <a href="https://www.rcsb.org/pages/advisory-committee" target="_blank">Advisory Committee</a> and the <a href="/more/training-outreach-education-working-group" target="_blank">Training, Outreach, and Education Working Group</a>.</p><a href="http://sciencegateways.org/" target="_blank"><img src="http://cdn.rcsb.org/pdb101/more/about/sgci-new-logo.png" alt="sgci-new-logo.png" width="65" height="40" style="margin-bottom: 10px;"></a> The Science Gateways Community Institute supported a PDB-101 intern and provided consultation services. <p><a href="https://www.rcsb.org/pages/privacy-policy" target="_blank">RCSB Protein Data Bank Privacy Statement</a></p> <p class="extraMrgin">Cite PDB-101: <br>PDB-101: Educational resources supporting molecular explorations through biology and medicine. Christine Zardecki, Shuchismita Dutta, David S. Goodsell, Robert Lowe, Maria Voigt, Stephen K. Burley. (2022) <em>Protein Science</em> <strong> 31</strong>: 129-140 doi:<a href="http://dx.doi.org/10.1002/pro.4200" target="_blank">10.1002/pro.4200</a></p><h3>Awards and Recognitions</h3> <table class='awards'> <tr> <th colspan='2'><h5>2024</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/goodsell/png-400/bacteriophage-t4-infection.png' style="width:100px;" ><br></td> <td><p><a href="https://commons.wikimedia.org/wiki/Commons:Wiki_Science_Competition_2023/Winners/United_States" target="_blank">2023 Wiki Science Competition</a> (non-photographic media), Wikimedia Commons</p> <p>Winner: National Jury's Choice Award (USA). Category: non-photographic media.<br> <a href="/learn/flyers-posters-and-calendars/poster/award-winning-illustration-of-bacteriophage-t4-infection"><em>Bacteriophage T4 Infection</em></a>, 2023. Illustration by David S. Goodsell,  RCSB Protein Data Bank and Scripps Research. doi: <a href="https://doi.org/10.2210/rcsb_pdb/goodsell-gallery-048">10.2210/rcsb_pdb/goodsell-gallery-048</a>.</p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/more/about/jounal-art-winner.jpg' style="width:100px;" ></td> <td><p>Journal Cover Art contest for <a href="https://www.liebertpub.com/toc/aid/40/1" target="_blank"><em>AIDS Research and Human Retroviruses</em></a></p> <p>Winner: <a href="/sci-art/goodsell-gallery/hiv-infected-cell"><em>HIV-Infected Cell</em></a>, 2022. Illustration by David S. Goodsell, B-HIVE Center, RCSB Protein Data Bank and Scripps Research. doi: <a href="https://doi.org/10.2210/rcsb_pdb/goodsell-gallery-047">10.2210/rcsb_pdb/goodsell-gallery-047</a>.</p></td> </tr> <tr> <th colspan='2'><h5>2023</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/rcsb-pdb/v2/secondary/images/edtechAward-CT-fin2023.jpg' style="width:100px;"></td> <td><p> Finalist, <a href='https://www.edtechdigest.com/2023-finalists-winners/' target='blank'>EdTech Awards</a> </p></td> </tr> <tr> <th colspan='2'><h5>2022</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/rcsb-pdb/v2/secondary/images/ShuchiDutta.jpg' style="width:100px;" alt="Shuchismita Dutta"></td> <td><p>Shuchismita Dutta named a Fellow of the <a href="https://www.aaas.org/page/2022-fellows-0" target="_blank">American Association for the Advancement of Science</a></p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/GoodsellHeadShot.png' style="width:100px;"></td> <td><p><I>Molecule of the Month</i> creator David S. Goodsell was honored with</p> <p> <ul> <li>The <a href="https://www.proteinsociety.org/page/protein-society-awards" target="_blank">Carl Br盲nd茅n Award</a> from The <a href="https://www.proteinsociety.org/" target="_blank">Protein Society</a>, which recognizes an outstanding protein scientist who has also made exceptional contributions in the areas of education and/or service.</li> <li>The <a href="https://www.amercrystalassn.org/fankuchen-goodsell-2022" target="_blank">I. Fankuchen Award</a> from the American Crystallographic Association, which recognizes <em>contributions to crystallographic research by one who is known to be an effective teacher of crystallography</em>.</li> </ul> </p></td> </tr> <tr> <th colspan='2'><h5>2021</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/droplet.png'></td> <td><p>Wiki Science Competition 2021: Wikipedia</p> <p> Finalist: <a href='https://commons.wikimedia.org/wiki/Commons:Wiki_Science_Competition_2021/Winners/United_States' target='blank'>United States</a> and <a href='https://www.wikisciencecompetition.org/2022/12/12/winners-of-wsc21-non-photographic-media/' target='blank'>International</a> <br /> <a href="/learn/flyers-posters-and-calendars/poster/award-winning-respiratory-droplet-illustration"><em>Respiratory Droplet</em></a> by David S. Goodsell </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/synapse.png'></td> <td><p>Wiki Science Competition 2021: Wikipedia</p> <p> Finalist: <a href='https://commons.wikimedia.org/wiki/Commons:Wiki_Science_Competition_2021/Winners/United_States' target='blank'>United States</a> and <a href='https://www.wikisciencecompetition.org/2022/12/12/winners-of-wsc21-non-photographic-media/' target='blank'>International</a> <br /> <a href="/learn/flyers-posters-and-calendars/poster/award-winning-illustration-of-glutamatergic-synapse"><em>Molecular view of glutamatergic synapse</em></a> by Maria Voigt </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/droplet.png'></td> <td><p><a href="https://www.faseb.org/partnerships-and-outreach/bioart" target="_blank">2021 FASEB BioArt Award</a></p> <p> Winner (Other Life Science Images Category): <br /> <a href="/sci-art/goodsell-gallery/respiratory-droplet"><em>Respiratory Droplet</em></a> by David S. Goodsell and Christine Zardecki </p></td> </tr> <tr> <th colspan='2'><h5>2020</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/news/2020/filmfest_laurels.jpg' width="100px" height="auto"></td> <td><p><a href='https://www.apha.org/filmfest' target='blank'>2020 American Public Health Association Film Festival</a> </p> <p> Official selection: <br /> <a href="https://pdb101.rcsb.org/learn/videos/fighting-coronavirus-with-soap"><em>Fighting Coronavirus with Soap</em></a> by Maria Voigt </p></td> </tr> <tr> <th colspan='2'><h5>2019</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/polymerase-tn.png'></td> <td><p><a href='https://en.wikipedia.org/wiki/Wikipedia:Wiki_Science_Competition_2019_in_the_United_States/Full_results' target='blank'>Wiki Science Competition 2019</a>: Wikipedia</p> <p> National finalist and <a href="https://www.wikisciencecompetition.org/2020/08/15/winners-of-wsc19-non-photographic-media/">International Runner-Up in <em>Non-photographic media</em> category</a>: <br /> <a href='/learn/flyers-posters-and-calendars/poster/award-winning-rna-polymerase-illustration'><em>RNA Polymerase</em></a> by Maria Voigt </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-measles.png'></td> <td><p><a href='https://faseb.org/partnerships-and-outreach/bioart/past-winners' target='blank'>BioArt Awards</a>: FASEB</p> <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/poster/award-winning-measles-virus-illustration'><em>Cross-Section of the Measles Virus</em></a> by David S. Goodsell </p></td> </tr> <tr> <th colspan='2'><h5>2018</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-calcium-pump.png'></td> <td><p><a href='https://faseb.org/partnerships-and-outreach/bioart/past-winners' target='blank'>BioArt Awards</a>: FASEB</p> <p> Winner: <br /> <a href='/learn/videos/calcium-pump'><em>Video of Calcium Pump in Action</em></a> by Maria Voigt </p></td> </tr> <tr> <th colspan='2'><h5>2017</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/more/about/logo-gen.png'></td> <td><p><a href='https://www.genengnews.com/best-of-the-web/pdb-101/3066' target='blank'>Genetic Engineering & Biotechnology News 37: 30.</a></p> <p> <i>"Best of the Web"</i>. <br /> <a href="/">PDB-101.rcsb.org</a> </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-zika-virus.jpg'></td> <td><p> <a href='https://www.nsf.gov/news/special_reports/scivis/vizzies_winners_2017.jsp' target='blank'>Vizzies Awards</a>: National Science Foundation (NSF) and Popular Science</p> <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/award-winning-zika-virus-illustration'><em>Zika Virus</em></a> by David Goodsell <br /> <i>People鈥檚 Choice Award in the category of illustration</i> </p></td> </tr> <tr> <th colspan='2'><h5>2016</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-hiv-enzymes.png'></td> <td><p><a href='http://www.faseb.org/Resources-for-the-Public/Scientific-Contests/BioArt/Past-Winners/2016-BioArt-Winners.aspx' target='blank'>BioArt Awards</a>: FASEB</p> <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/award-winning-hiv-enzyme-illustration'><i>HIV Enzymes</i></a>, Maria Voigt and David Goodsell </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-ebola.png'></td> <td><p><a href='http://www.wellcomeimageawards.org/2016/' target='blank'>Wellcome Image Awards</a>: Wellcome Trust</p> <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/award-winning-ebola-illustration'><i>Ebola Virus proteins</i> </a> by David Goodsell <br /> <i>Overall winner</i>. </p></td> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-clathrin.png'></td> <td><p><a href='http://www.wellcomeimageawards.org/2016/' target='blank'>Wellcome Image Awards</a>: Wellcome Trust <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/award-winning-clathrin-illustration'><i>Clathrin</i></a> by Maria Voigt </p></td> </tr> <tr> <th colspan='2'><h5>2015</h5></th> </tr> <tr> <td><img src='https://cdn.rcsb.org/pdb101/learn/images/tn/award-ebola.png'></td> <td><p><a href='http://www.faseb.org/Resources-for-the-Public/Scientific-Contests/BioArt/Past-Winners/2015-BioArt-Winners.aspx' target='blank'>BioArt Awards</a>: FASEB</p> <p> Winner: <br /> <a href='/learn/flyers-posters-and-calendars/award-winning-ebola-illustration'><i>Ebola Virus proteins</i></a> by David Goodsell </p></td> </tr> </table> </div> </div> </div> <div id="footer_main" class="hidden-print"> <div class="container"> <div class="row"> <div class="col-sm-12 col-md-7"> <p><strong>About PDB-101</strong></p> <p>Researchers around the globe make 3D structures freely available from the Protein Data Bank (PDB) archive. PDB-101 training materials help graduate students, postdoctoral scholars, and researchers use PDB data and RCSB PDB tools. Outreach content demonstrate how PDB data impact fundamental biology, biomedicine, bioengineering/biotechnology, and energy sciences in 3D for a diverse and multidisciplinary user community. Education Materials provide lessons and activities for teaching and learning.</p> <p>PDB-101 is developed by the <a href="https://rcsb.org" target="_blank">RCSB PDB</a>.</p> </div> <div class="col-sm-12 col-md-5 text-center"> <p>RCSB PDB (<a href="http://nar.oxfordjournals.org/content/28/1/235.abstract" target="blank">citation</a>) is hosted by</p><img src="//cdn.rcsb.org/pdb101/common/images/Logo_Rutgers-2024.png" alt="Rutgers University logo" usemap="#rutgers-map" height="32" style="padding:0px 10px; border-right: 1px solid #000000;"><img src="//cdn.rcsb.org/pdb101/common/images/Logo_UCSD-SDSC.png" alt="University of California San Diego/San Diego Supercomputer Center logos" usemap="#UCSD-SDSC-map" height="26" style="padding: 0px 10px; border-right: 1px solid #000000;"><img src="//cdn.rcsb.org/pdb101/common/images/Logo_UCSF.png" alt="Univesity of California San Franciscologo" usemap="#UCSF-map" height="26" style="padding-left: 10px;"><map name="rutgers-map"> <area shape="rect" coords="0,0,115,26" href="http://www.rutgers.edu/" alt="Rutgers" target="_blank"></map><map name="UCSD-SDSC-map"> <area shape="rect" coords="0,0,150,26" href="http://ucsd.edu/" alt="UCSD" target="_blank"> <area shape="rect" coords="151,0,255,26" href="http://www.sdsc.edu/" alt="SDSC" target="_blank"></map><map name="UCSF-map"> <area shape="rect" coords="0,0,64,26" href="http://www.ucsf.edu/" alt="UCSF" target="_blank"></map><br><br> <p>RCSB PDB is a member of <span id='pdbmembers_footer'><a href='http://www.wwpdb.org/' target='_blank'><img src='//cdn.rcsb.org/pdb101/common/images/Logo_wwpdb.png' width='70'></a><span class='pipe'></span><a href='http://www.emdatabank.org/' target='_blank'><img src='https://cdn.rcsb.org/pdb101/common/images/EMDataResourcelogo.png' width='100'></a></p> </div> </div> </div> </div> <div id="footer_grant" class="hidden-print"> <div class="container"> <div class="row"> <p>RCSB PDB Core Operations are funded by the <a href="http://www.nsf.gov/" target="_blank">U.S. National Science Foundation</a> (DBI-2321666), the <a href="http://science.energy.gov/" target="_blank">US Department of Energy</a> (DE-SC0019749), and the <a href="http://www.cancer.gov/" target="_blank">National Cancer Institute</a>, <a href="http://www.niaid.nih.gov/" target="_blank">National Institute of Allergy and Infectious Diseases</a>, and <a href="http://www.nigms.nih.gov/" target="_blank">National Institute of General Medical Sciences</a> of the <a href="http://www.nih.gov/" target="_blank">National Institutes of Health</a> under grant R01GM157729.</p> </div> </div> </div> <div id="jira-fdbck"></div><script> //Google Analytics tracking code {/* (function(i,s,o,g,r,a,m){i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){ (i[r].q=i[r].q||[]).push(arguments)},i[r].l=1*new Date();a=s.createElement(o), m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;m.parentNode.insertBefore(a,m) })(window,document,'script','//www.google-analytics.com/analytics.js','ga'); ga('create', 'UA-71059016-1', 'auto'); ga('send', 'pageview'); */} </script> </div> </body> </html>

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