CINXE.COM

<!DOCTYPE html><html lang="en"><head><script src="https://www.googletagmanager.com/gtag/js?id=G-5JMGYPWJRR" async></script><script>//- global rcsb-config object var RC = { googleAnalyticsTrackingId: 'UA-3923365-3' , instance: 'production' , isProductionServer: true , dataUrl: 'https://data.rcsb.org/' , searchUrl: 'https://search.rcsb.org/rcsbsearch/v2/' , alignmentHost: 'https://alignment.rcsb.org' , alignmentUrl: 'https://alignment.rcsb.org/api/v1/' , fileStorageUrl: 'https://user-upload.rcsb.org/v1/' , fileStoragePutEndpoint: 'putMultipart' , fileStorageGetEndpoint: 'download' , sequenceCoordinatesUrl: 'https://1d-coordinates.rcsb.org/' , internalAnalyticsOriginHeaderKey: 'Rcsb-Analytics-Traffic-Origin' , internalAnalyticsOriginHeaderValue: 'internal' , internalAnalyticsStageHeaderKey: 'Rcsb-Analytics-Traffic-Stage' , internalAnalyticsStageHeaderValue: 'production' , MOLSTAR_IMG_URL: 'https://cdn.rcsb.org/images/structures/' }; </script><script src="/search/search-data?ts=5776610"></script><script src="/js/search/react-search.js?ts=5776610"></script><script>!function(){if("performance"in window==0&&(window.performance={}),Date.now=Date.now||function(){return(new Date).getTime()},"now"in window.performance==0){var n=Date.now();performance.timing&&performance.timing.navigationStart&&(n=performance.timing.navigationStart),window.performance.now=function(){return Date.now()-n}}}();(function(){var h="undefined"!=typeof window&&window===this?this:"undefined"!=typeof global&&null!=global?global:this,k="function"==typeof Object.defineProperties?Object.defineProperty:function(a,b,c){a!=Array.prototype&&a!=Object.prototype&&(a[b]=c.value)};function l(){l=function(){};h.Symbol||(h.Symbol=m)}var n=0;function m(a){return"jscomp_symbol_"+(a||"")+n++} function p(){l();var a=h.Symbol.iterator;a||(a=h.Symbol.iterator=h.Symbol("iterator"));"function"!=typeof Array.prototype[a]&&k(Array.prototype,a,{configurable:!0,writable:!0,value:function(){return q(this)}});p=function(){}}function q(a){var b=0;return r(function(){return b<a.length?{done:!1,value:a[b++]}:{done:!0}})}function r(a){p();a={next:a};a[h.Symbol.iterator]=function(){return this};return a}function t(a){p();var b=a[Symbol.iterator];return b?b.call(a):q(a)} function u(a){if(!(a instanceof Array)){a=t(a);for(var b,c=[];!(b=a.next()).done;)c.push(b.value);a=c}return a}var v=0;function w(a,b){var c=XMLHttpRequest.prototype.send,d=v++;XMLHttpRequest.prototype.send=function(f){for(var e=[],g=0;g<arguments.length;++g)e[g-0]=arguments[g];var E=this;a(d);this.addEventListener("readystatechange",function(){4===E.readyState&&b(d)});return c.apply(this,e)}} function x(a,b){var c=fetch;fetch=function(d){for(var f=[],e=0;e<arguments.length;++e)f[e-0]=arguments[e];return new Promise(function(d,e){var g=v++;a(g);c.apply(null,[].concat(u(f))).then(function(a){b(g);d(a)},function(a){b(a);e(a)})})}}var y="img script iframe link audio video source".split(" ");function z(a,b){a=t(a);for(var c=a.next();!c.done;c=a.next())if(c=c.value,b.includes(c.nodeName.toLowerCase())||z(c.children,b))return!0;return!1} function A(a){var b=new MutationObserver(function(c){c=t(c);for(var b=c.next();!b.done;b=c.next())b=b.value,"childList"==b.type&&z(b.addedNodes,y)?a(b):"attributes"==b.type&&y.includes(b.target.tagName.toLowerCase())&&a(b)});b.observe(document,{attributes:!0,childList:!0,subtree:!0,attributeFilter:["href","src"]});return b} function B(a,b){if(2<a.length)return performance.now();var c=[];b=t(b);for(var d=b.next();!d.done;d=b.next())d=d.value,c.push({timestamp:d.start,type:"requestStart"}),c.push({timestamp:d.end,type:"requestEnd"});b=t(a);for(d=b.next();!d.done;d=b.next())c.push({timestamp:d.value,type:"requestStart"});c.sort(function(a,b){return a.timestamp-b.timestamp});a=a.length;for(b=c.length-1;0<=b;b--)switch(d=c[b],d.type){case "requestStart":a--;break;case "requestEnd":a++;if(2<a)return d.timestamp;break;default:throw Error("Internal Error: This should never happen"); }return 0}function C(a){a=a?a:{};this.w=!!a.useMutationObserver;this.u=a.minValue||null;a=window.__tti&&window.__tti.e;var b=window.__tti&&window.__tti.o;this.a=a?a.map(function(a){return{start:a.startTime,end:a.startTime+a.duration}}):[];b&&b.disconnect();this.b=[];this.f=new Map;this.j=null;this.v=-Infinity;this.i=!1;this.h=this.c=this.s=null;w(this.m.bind(this),this.l.bind(this));x(this.m.bind(this),this.l.bind(this));D(this);this.w&&(this.h=A(this.B.bind(this)))} C.prototype.getFirstConsistentlyInteractive=function(){var a=this;return new Promise(function(b){a.s=b;"complete"==document.readyState?F(a):window.addEventListener("load",function(){F(a)})})};function F(a){a.i=!0;var b=0<a.a.length?a.a[a.a.length-1].end:0,c=B(a.g,a.b);G(a,Math.max(c+5E3,b))} function G(a,b){!a.i||a.v>b||(clearTimeout(a.j),a.j=setTimeout(function(){var b=performance.timing.navigationStart,d=B(a.g,a.b),b=(window.a&&window.a.A?1E3*window.a.A().C-b:0)||performance.timing.domContentLoadedEventEnd-b;if(a.u)var f=a.u;else performance.timing.domContentLoadedEventEnd?(f=performance.timing,f=f.domContentLoadedEventEnd-f.navigationStart):f=null;var e=performance.now();null===f&&G(a,Math.max(d+5E3,e+1E3));var g=a.a;5E3>e-d?d=null:(d=g.length?g[g.length-1].end:b,d=5E3>e-d?null:Math.max(d, f));d&&(a.s(d),clearTimeout(a.j),a.i=!1,a.c&&a.c.disconnect(),a.h&&a.h.disconnect());G(a,performance.now()+1E3)},b-performance.now()),a.v=b)} function D(a){a.c=new PerformanceObserver(function(b){b=t(b.getEntries());for(var c=b.next();!c.done;c=b.next())if(c=c.value,"resource"===c.entryType&&(a.b.push({start:c.fetchStart,end:c.responseEnd}),G(a,B(a.g,a.b)+5E3)),"longtask"===c.entryType){var d=c.startTime+c.duration;a.a.push({start:c.startTime,end:d});G(a,d+5E3)}});a.c.observe({entryTypes:["longtask","resource"]})}C.prototype.m=function(a){this.f.set(a,performance.now())};C.prototype.l=function(a){this.f.delete(a)}; C.prototype.B=function(){G(this,performance.now()+5E3)};h.Object.defineProperties(C.prototype,{g:{configurable:!0,enumerable:!0,get:function(){return[].concat(u(this.f.values()))}}});var H={getFirstConsistentlyInteractive:function(a){a=a?a:{};return"PerformanceLongTaskTiming"in window?(new C(a)).getFirstConsistentlyInteractive():Promise.resolve(null)}}; "undefined"!=typeof module&&module.exports?module.exports=H:"function"===typeof define&&define.amd?define("ttiPolyfill",[],function(){return H}):window.ttiPolyfill=H;})();function gtag(){dataLayer.push(arguments)}var logger=function(){"use strict";function n(n){if(n=JSON.stringify(n),"sendBeacon"in navigator)navigator.sendBeacon(t,n);else{var e=new XMLHttpRequest;e.open("POST",t,!1),e.setRequestHeader("Content-Type","text/plain;charset=UTF-8"),e.send(n)}}function e(e,t,i){if(!RC.isProductionServer)switch(e){case"error":case"warn":case"info":i?console[e](t,i):console[e](t);break;default:console.log(t,i)}"error"!==e&&"warn"!==e||(r.push({level:e,msg:t||"",info:Object.assign({},i,{path:window.location.pathname,userAgent:navigator.userAgent})}),r.length>=o&&n(r.splice(0,o)))}var t="/analytics",o=10,r=[];return window.addEventListener("unload",function(){n(r)},!1),{stack:Function.prototype.bind.call(function(n){n&&e("error",n.name+': "'+n.message+'"',{type:n.name,description:n.message,trace:n.stack})}),error:Function.prototype.bind.call(function(n,t){e("error",n,t)}),warn:Function.prototype.bind.call(function(n,t){e("warn",n,t)}),info:Function.prototype.bind.call(function(n,t){e("info",n,t)}),verbose:Function.prototype.bind.call(function(n,t){e("verbose",n,t)}),debug:Function.prototype.bind.call(function(n,t){e("debug",n,t)}),silly:Function.prototype.bind.call(function(n,t){e("silly",n,t)})}}();window.dataLayer=window.dataLayer||[],gtag("js",new Date),gtag("config","G-5JMGYPWJRR"),window.addEventListener("error",function(n){logger.stack(n.error)}),window.addEventListener("unhandledrejection",function(n){n&&n.reason&&logger.error('Unhandled promise rejection: "'+n.reason.message+'"',{type:"PromiseRejection",description:n.reason.message,trace:n.reason.stack})});var gtagFirstMeaningfulPaint=function(){var n=!1;return function(){n?logger.warn('Timing for "firstMeaningfulPaint" already sent'):(console.log("firstMeaningfulPaint",Math.round(performance.now())),n=!0)}}();!function(){"use strict";var n=0;if("PerformanceObserver"in window&&"PerformancePaintTiming"in window){new PerformanceObserver(function(e){e.getEntries().forEach(function(e){if(0===n){e.startTime,e.duration}})}).observe({entryTypes:["paint"]});var e=window.__tti={e:[]};e.o=new PerformanceObserver(function(n){e.e=e.e.concat(n.getEntries())}),e.o.observe({entryTypes:["longtask"]}),ttiPolyfill.getFirstConsistentlyInteractive({}).then(function(n){});new PerformanceObserver(function(n){n.getEntries().forEach(function(n){var e=n.attribution[0]||{},t={containerType:e.containerType,containerName:e.containerName,containerId:e.containerId,containerSrc:e.containerSrc,frameOrigin:n.name,durationMs:n.duration,startTimeMs:n.startTime};n.duration>500&&logger.warn("Long running task, duration "+n.duration.toFixed(2)+"ms.",t)})}).observe({entryTypes:["longtask"]})}var t=performance.now();window.addEventListener("visibilitychange",function(){document.hidden?t=performance.now():n+=performance.now()-t}),window.addEventListener("load",function(){performance.now()}),window.addEventListener("DOMContentLoaded",function(){performance.now()})}();</script><title>Genome Location</title><meta http-equiv="Content-Type" content="text/html; charset=UTF-8"><meta property="og:title" content="Genome Location"><meta property="og:description" content="As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to agreed upon standards. The RCSB PDB also provides a variety of tools and resources. Users can perform simple and advanced searches based on annotations relating to sequence, structure and function. These molecules are visualized, downloaded, and analyzed by users who range from students to specialized scientists."><meta property="og:image" content="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/rcsb_logo2.png"><meta name="twitter:card" content="summary_large_image"><meta name="twitter:title" content="Genome Location"><meta name="twitter:description" content="As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to agreed upon standards. The RCSB PDB also provides a variety of tools and resources. Users can perform simple and advanced searches based on annotations relating to sequence, structure and function. These molecules are visualized, downloaded, and analyzed by users who range from students to specialized scientists."><meta name="twitter:image" content="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/rcsb_logo2.png"><meta name="description" content="As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to agreed upon standards. The RCSB PDB also provides a variety of tools and resources. Users can perform simple and advanced searches based on annotations relating to sequence, structure and function. These molecules are visualized, downloaded, and analyzed by users who range from students to specialized scientists."><meta name="author" content="RCSB Protein Data Bank"><meta name="email" content="info@rcsb.org"><meta name="Charset" content="UTF-8"><meta name="Distribution" content="Global"><meta name="Rating" content="General"><meta http-equiv="content-language" content="en-US"><meta name="viewport" content="width=device-width, initial-scale=1"><meta name="theme-color" content="#5e94c3"><meta class="elastic" name="release_date" content="release.date:undef"><link rel="manifest" href="/manifest.json"><link rel="apple-touch-icon" href="/img/rcsb-apple-touch-icon.jpg"><link rel="stylesheet" href="https://cdn.rcsb.org/javascript/bootstrap/latest/css/bootstrap.min.css"><link rel="stylesheet" href="https://cdn.rcsb.org/javascript/fontawesome/latest/css/font-awesome.min.css"><link rel="stylesheet" href="/build/css/main.css"><link rel="stylesheet" href="/css/search.css?ts=5776610"><script>window.addEventListener('load', function () { // load the JIRA feedback button only after everything else has been loaded var script = document.createElement("script"); script.src = "/js/jira-fdbck.js"; script.type = "text/javascript"; document.getElementsByTagName("head")[0].appendChild(script); var link = document.createElement("link"); link.rel = "stylesheet"; link.href = "https://cdn.rcsb.org/jira-feedback/css/jira-fdbck.css"; document.getElementsByTagName("head")[0].appendChild(link); // load the ekko-lightbox css only after everything else has been loaded var link = document.createElement("link"); link.rel = "stylesheet"; link.href = "/css/ekko-lightbox.css"; document.getElementsByTagName("head")[0].appendChild(link); }); </script><script src="https://cdn.rcsb.org/javascript/jquery/jquery-3.3.1.min.js"></script><script src="https://cdn.rcsb.org/javascript/bootstrap/latest/js/bootstrap.min.js"></script><script src="/js/ekko-lightbox.min.js" defer></script><script>$(document).delegate('*[data-toggle="lightbox"]',"click",function(t){t.preventDefault(),$(this).ekkoLightbox()});$(function(){$(".nav>.dropdown").on("mouseenter",function(o){$(this).addClass("open")}),$(".nav>.dropdown").on("mouseleave",function(o){$(".dropdown").removeClass("open")}),$('[data-toggle="tooltip"]').tooltip()});</script></head><body><div data-elastic-exclude><div data-elastic-exclude><nav class="navbar navbar-inverse navbar-fixed-top hidden-print" id="nav" role="navigation"><div class="hide hidden-print" id="UnsupportedBrowser" style="width: 100%; border-bottom: 2px solid #FFA500; background-color: #FFFFFF; color: #000000; display: inline-block; font-size: .9em; line-height: 2em; text-align: center; font-weight: bold; font-style: italic;"><span class="label label-warning" style="font-size: 100%;">Warning</span> You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.</div><div class="container"><div class="row pull-right"><div class="col-sm-12"><div class="input-group"> <a class="button btn btn-sm basic navbar-buttons" href="/help">Help</a><div class="button btn btn-sm basic jira-fdbck-btn navbar-buttons" id="feedbackLink-ContactUs">Contact us</div><div class="navbar-buttons hidden-xs mypdb-style" id="mypdb-menu-container"></div></div></div></div><div class="navbar-header"><button class="navbar-toggle pull-left" type="button" data-toggle="collapse" data-target="#navbar-collapse-RCSB"><span class="sr-only">Toggle navigation</span><span class="icon-bar"></span><span class="icon-bar"></span><span class="icon-bar"></span></button><a class="navbar-brand" href="/">RCSB PDB</a></div><div class="collapse navbar-collapse" id="navbar-collapse-RCSB" style="max-height: 420px;"><ul class="nav navbar-nav pull-left"><li class="dropdown" id="headnav_deposit"><a class="dropdown-toggle" href="#" data-toggle="dropdown" aria-expanded="false">Deposit <b class="caret"></b></a><div class="dropdown-menu multi-column" id="DepositDropdownNav"><div class="row"><div class="col-xs-12 col-sm-2 col-md-2"><ul class="dropdown-menu" id="head-deposit_prepare"><h4>Prepare Data</h4><li> <a href="https://www.wwpdb.org/deposition/preparing-pdbx-mmcif-files" rel="noopener" target="_blank">PDBx/mmCIF file</a></li><li> <a href="https://pdb-extract.wwpdb.org/" rel="noopener" target="_blank">pdb_extract</a></li><li> <a href="http://sf-tool.wwpdb.org/" rel="noopener" target="_blank">SF-Tool</a></li><li> <a href="http://ligand-expo.rcsb.org/" rel="noopener" target="_blank">Ligand Expo</a></li><li> <a href="https://sw-tools.rcsb.org/apps/MAXIT/index.html" rel="noopener" target="_blank">MAXIT</a></li></ul></div><div class="col-xs-12 col-sm-3 col-md-3"><ul class="dropdown-menu" id="head-deposit_validate"><h4>Validate Data</h4><li> <a href="https://validate-rcsb.wwpdb.org" rel="noopener" target="_blank">Validation Server</a></li><li> <a href="http://www.wwpdb.org/validation/onedep-validation-web-service-interface" rel="noopener" target="_blank">Validation API</a></li><li> <a href="http://www.wwpdb.org/documentation/journals" rel="noopener" target="_blank">Information for Journals</a></li><li> <a href="http://www.wwpdb.org/task/validation-task-forces.php" rel="noopener" target="_blank">Validation Task Forces</a></li></ul></div><div class="col-xs-12 col-sm-3 col-md-3"><ul class="dropdown-menu" id="head-deposit_deposit-data"><h4>Deposit Data</h4><li style="word-break: normal"> <a href="https://deposit.wwpdb.org/deposition/" rel="noopener" target="_blank" style="word-break: normal">wwPDB OneDep System</a></li><li style="word-break: normal"> <a href="https://pdb-dev.wwpdb.org/" rel="noopener" target="_blank" style="word-break: normal">PDB-Dev</a></li></ul></div><div class="col-xs-12 col-sm-2 col-md-3"><ul class="dropdown-menu" id="head-deposit_deposit-help"><h4>Help and Resources</h4><li> <a href="http://www.wwpdb.org/deposition/faq" rel="noopener" target="_blank">Deposit FAQ</a></li><li> <a href="http://www.wwpdb.org/validation/2017/FAQs" rel="noopener" target="_blank">Validation FAQ</a></li><li> <a href="http://www.wwpdb.org/deposition/tutorial" rel="noopener" target="_blank">Tutorials</a></li><li> <a href="http://www.wwpdb.org/documentation/policy" rel="noopener" target="_blank">Annotation Policies</a></li><li> <a href="http://www.wwpdb.org/documentation/procedure" rel="noopener" target="_blank">Processing Procedures</a></li><li> <a href="https://mmcif.wwpdb.org/" rel="noopener" target="_blank">PDBx/mmCIF Dictionary</a></li><li> <a href="https://mmcif.wwpdb.org/docs/user-guide/guide.html" rel="noopener" target="_blank">PDBx/mmCIF User Guide</a></li><li> <a href="https://www.wwpdb.org/data/ccd" rel="noopener" target="_blank">Chemical Component Dictionary</a></li><li> <a href="https://www.wwpdb.org/data/bird" rel="noopener" target="_blank">Biologically Interesting Molecule Reference Dictionary (BIRD)</a></li><li> <a href="https://biosync.sbkb.org/" rel="noopener" target="_blank">BioSync/Beamlines/Facilities</a></li><li> <a href="https://sw-tools.rcsb.org/" rel="noopener" target="_blank">Related Tools</a></li></ul></div></div></div></li><li class="dropdown" id="headnav_search"><a class="dropdown-toggle" href="#" data-toggle="dropdown">Search <b class="caret"></b></a><ul class="dropdown-menu"><li><a href="/search/advanced" rel="noopener">Advanced Search</a></li><li><a href="/search/advanced/sequence" rel="noopener">Sequence Similarity Search</a></li><li><a href="/search/advanced/structure" rel="noopener">Structure Similarity Search</a></li><li><a href="/search/advanced/chemical" rel="noopener">Chemical Similarity Search</a></li><li><a href="/chemical-sketch" rel="noopener">Chemical Sketch Tool</a></li><li><a href="/search/browse/atc" rel="noopener">Browse by Annotations</a></li><li><a href="/search?query=%7B%22parameters%22%3A%7B%22attribute%22%3A%22rcsb_accession_info.initial_release_date%22%2C%22operator%22%3A%22range%22%2C%22value%22%3A%7B%22from%22%3A%22now-1w%22%2C%22include_lower%22%3Afalse%2C%22to%22%3A%22now%22%2C%22include_upper%22%3Atrue%7D%7D%7D" rel="noopener">New Entries</a></li><li><a href="/pages/unreleased" rel="noopener">Unreleased Entries</a></li><li><a href="/stats" rel="noopener">PDB Statistics</a></li></ul></li><li class="dropdown" id="headnav_visualize"><a class="dropdown-toggle" href="#" data-toggle="dropdown">Visualize <b class="caret"></b></a><ul class="dropdown-menu"> <li><a href="/3d-view" rel="noopener">Mol* (MolStar)</a></li><li><a href="/docs/sequence-viewers/sequence-annotations-viewer" rel="noopener">Sequence Annotations Viewer</a></li><li><a href="/docs/sequence-viewers/genome-view" rel="noopener">Genome View</a></li></ul></li><li class="dropdown" id="headnav_analyze"><a class="dropdown-toggle" href="#" data-toggle="dropdown">Analyze <b class="caret"></b></a><ul class="dropdown-menu"><li><a href="/alignment" rel="noopener">Pairwise Structure Alignment</a></li><li><a href="/docs/general-help/symmetry-resources-in-the-pdb" rel="noopener">Symmetry Resources in the PDB</a></li><li><a href="https://www.wwpdb.org/validation/validation-reports" rel="noopener" target="_blank">Structure Quality </a></li><li><a href="/docs/grouping-structures/overview-grouping-structures" rel="noopener">Grouping Structures</a></li><li><a href="https://cdn.rcsb.org/rcsb-pdb/pdb50mesh/index.html" rel="noopener" target="_blank">PDB Citation MeSH Network Explorer </a></li><li><a href="/stats" rel="noopener">PDB Statistics</a></li><li><a href="https://www.eppic-web.org" rel="noopener" target="_blank">EPPIC Biological Assemblies </a></li><li class="extraList">External Data and Resources </li><li class="extraMargin"><a href="/docs/general-help/data-from-external-resources-integrated-into-rcsb-pdb" rel="noopener">Integrated Resources </a></li><li class="extraMargin"><a href="/docs/additional-resources/databases-and-knowledgebases" rel="noopener">Additional Resources </a></li></ul></li><li class="dropdown hidden-xs hidden-sm" id="headnav_download"><a class="dropdown-toggle" href="#" data-toggle="dropdown">Download <b class="caret"></b></a><ul class="dropdown-menu"> <li><a href="/downloads" rel="noopener">Coordinates and Experimental Data</a></li><li><a href="/downloads/fasta" rel="noopener">Sequences</a></li><li><a href="/downloads/ligands" rel="noopener">Ligands</a></li><li><a href="/docs/programmatic-access/file-download-services" rel="noopener">File Download Services</a></li><li><a href="/docs/programmatic-access/web-apis-overview" rel="noopener">Web APIs</a></li></ul></li><li class="dropdown" id="headnav_learn"><a class="dropdown-toggle" href="#" data-toggle="dropdown">Learn <b class="caret"></b></a><ul class="dropdown-menu"><h4><a href="http://pdb101.rcsb.org" target="_blank" rel="noopener"><img class="image_submenu" src="https://cdn.rcsb.org/rcsb-pdb/v2/home/images/menuImgs/pdb101Logo.png"></a></h4><li><a href="https://pdb101.rcsb.org/train/training-events" rel="noopener" target="_blank">Training Courses </a></li><li><a href="https://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/introduction" rel="noopener" target="_blank">Guide to PDB Data </a></li><li><a href="https://pdb101.rcsb.org/motm/motm-by-date" rel="noopener" target="_blank">Molecule of the Month </a></li><li><a href="https://pdb101.rcsb.org/learn/paper-models" rel="noopener" target="_blank">Educational Resources </a></li><li><a href="https://pdb101.rcsb.org/teach/overview" rel="noopener" target="_blank">Curricula </a></li><li><a href="https://pdb101.rcsb.org/browse" rel="noopener" target="_blank">Browse </a></li><li><a href="https://pdb101.rcsb.org/news/2023" rel="noopener" target="_blank">News </a></li><li class="extraList">SciArt Galleries </li><li class="extraMargin"><a href="https://pdb101.rcsb.org/sci-art/geis-archive/gallery-by-name" rel="noopener" target="blank">Irving Geis </a></li><li class="extraMargin"><a href="https://pdb101.rcsb.org/sci-art/goodsell-gallery" rel="noopener" target="blank">David Goodsell </a></li></ul></li><li class="dropdown" id="headnav_more"><a class="dropdown-toggle" href="#" data-toggle="dropdown">About <b class="caret"></b></a><ul class="dropdown-menu"><li><a href="/pages/contactus" rel="noopener">Contact Us</a></li><li><a href="/pages/about-us/index" rel="noopener">About RCSB PDB</a></li><li><a href="/pages/about-us/mission" rel="noopener">Vision and Mission</a></li><li><a href="/pages/policies" rel="noopener">Citation, Usage, Privacy Policies, Logo</a></li><li><a href="/pages/news" rel="noopener">News</a></li><li><a href="/pages/about-us/history" rel="noopener">PDB History</a></li><li><a href="/pages/pdb50" rel="noopener">PDB50</a></li><li><a href="/pages/about-us/pdb-user-community" rel="noopener">User Community</a></li><li><a href="/pages/publications" rel="noopener">Publications</a></li><li><a href="/pages/advisory-committee" rel="noopener">RCSB PDB Advisory Committee</a></li><li><a href="/pages/team" rel="noopener">Team Members</a></li><li><a href="/pages/about-us/deia" rel="noopener">Diversity, Equity, Inclusion, and Access</a></li><li><a href="https://status.rcsb.org/" rel="noopener" target="_blank">Service Status </a></li></ul></li><li class="nodropdown"><a class="dropdown-toggle" href="/pages/jobs">Careers</a></li><li class="nodropdown"><a class="dropdown-toggle" href="/news/feature/5e74d55d2d410731e9944f52">COVID-19</a></li><li class="dropdown visible-xs"><div id="socialmedia_section_mobile"><ul class="fa-ul hidden-print"><li><a href="https://www.facebook.com/RCSBPDB" target="_blank" rel="noopener" title="Facebook" data-placement="top" data-toggle="tooltip"><i class="fa fa-facebook-square fa-lg"></i></a></li><li><a href="https://twitter.com/buildmodels" target="_blank" rel="noopener" title="Twitter" data-placement="top" data-toggle="tooltip"><i class="fa fa-twitter fa-lg"></i></a></li><li><a href="https://www.youtube.com/user/RCSBProteinDataBank" target="_blank" rel="noopener" title="YouTube" data-placement="top" data-toggle="tooltip"><i class="fa fa-youtube-play fa-lg"></i></a></li><li><a href="https://github.com/rcsb" target="_blank" rel="noopener" title="Github" data-placement="top" data-toggle="tooltip"><i class="fa fa-github fa-lg"></i></a></li><li><a href="https://www.linkedin.com/company/rcsb-protein-data-bank" target="_blank" rel="noopener" title="LinkedIn" data-placement="top" data-toggle="tooltip"><i class="fa fa-linkedin fa-lg"></i></a></li></ul></div></li></ul></div></div></nav></div><style>#PDBmembers li {margin-right: 15px; } </style><div data-elastic-exclude><div id="header"><div class="container"><div class="row" style="margin-bottom: 0px;"><div class="col-md-6 col-lg-5 hidden-sm hidden-xs" id="logo_container" style="padding-bottom: 15px;"><table class="header-left"><tr><td><a href="/"><img id="rcsblogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/rcsb_logo.png" alt="RCSB PDB"></a></td><td><table id="header-counts"><tr><td><div class="results-content-type-sm experimental"><span class="fa fa-flask" data-toggle="tooltip" data-placement="right" data-original-title="Experimental PDB Structure"></span></div></td><td><a href="/search?request=%7B%22query%22%3A%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22terminal%22%2C%22service%22%3A%22text%22%2C%22parameters%22%3A%7B%22attribute%22%3A%22rcsb_entry_info.structure_determination_methodology%22%2C%22operator%22%3A%22exact_match%22%2C%22value%22%3A%22experimental%22%7D%7D%5D%2C%22logical_operator%22%3A%22and%22%7D%5D%2C%22logical_operator%22%3A%22and%22%2C%22label%22%3A%22text%22%7D%5D%2C%22logical_operator%22%3A%22and%22%7D%2C%22return_type%22%3A%22entry%22%2C%22request_options%22%3A%7B%22scoring_strategy%22%3A%22combined%22%2C%22results_content_type%22%3A%5B%22experimental%22%5D%7D%7D" style="font-weight: bold; font-size: 110%">227,933</a><span> Structures from the PDB</span></td></tr><tr><td><div class="results-content-type-sm computational"><span class="fa fa-desktop" data-toggle="tooltip" data-placement="right" data-original-title="Computed Structure Model"></span></div></td><td><a href="/search?request=%7B%22query%22%3A%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22group%22%2C%22nodes%22%3A%5B%7B%22type%22%3A%22terminal%22%2C%22service%22%3A%22text%22%2C%22parameters%22%3A%7B%22attribute%22%3A%22rcsb_entry_info.structure_determination_methodology%22%2C%22operator%22%3A%22exact_match%22%2C%22value%22%3A%22computational%22%7D%7D%5D%2C%22logical_operator%22%3A%22and%22%7D%5D%2C%22logical_operator%22%3A%22and%22%2C%22label%22%3A%22text%22%7D%5D%2C%22logical_operator%22%3A%22and%22%7D%2C%22return_type%22%3A%22entry%22%2C%22request_options%22%3A%7B%22scoring_strategy%22%3A%22combined%22%2C%22results_content_type%22%3A%5B%22computational%22%5D%7D%7D" style="font-weight: bold; font-size: 110%">1,068,577</a><span> Computed Structure Models (CSM)</span></td></tr></table></td></tr></table></div><div class="col-sm-12 col-md-6 col-lg-7 hidden-print" id="search-bar-container"></div></div></div><div class="logos_bcg"><div class="container"><ul class="hidden-xs hidden-print" id="PDBmembers"><li><span data-toggle="tooltip" data-placement="right" data-original-title="PDB-101: Training and outreach portal of RCSB PDB"><a href="https://pdb101.rcsb.org/"><img id="pdb101logo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/pdb101-truncated.png" alt="PDB-101"></a></span></li><li><span data-toggle="tooltip" data-placement="right" data-original-title="wwPDB: Worldwide Protein Data Bank"><a href="https://www.wwpdb.org/" target="_blank" rel="noopener"><img id="wwpdblogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/wwpdb-truncated.png" alt="wwPDB"></a></span></li><li><span data-toggle="tooltip" data-placement="right" data-original-title="EMDataResource: 3DEM resources"><a href="https://www.emdataresource.org" target="_blank" rel="noopener"><img id="emdatabanklogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/emdb-truncated.png" alt="EMDataResource"></a></span></li><li><span data-toggle="tooltip" data-placement="right" data-original-title="NAKB: Nucleic Acid Knowledgebase"><a href="https://nakb.org/" target="_blank" rel="noopener"><img id="nakblogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/nakb-logo.png" alt="NAKB: Nucleic Acid Knowledgebase"></a></span></li><li><span data-toggle="tooltip" data-placement="right" data-original-title="wwPDB Foundation: Donate to support wwPDB outreach activities"><a href="https://foundation.wwpdb.org/" target="_blank" rel="noopener"><img id="wwpdbfoundationlogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/foundation-truncated.png" alt="wwPDB Foundation"></a></span></li><li><span data-toggle="tooltip" data-placement="right" data-original-title="PDB-Dev: Prototype Archiving System for Integrative Structures"><a href="https://pdb-dev.wwpdb.org/" target="_blank" rel="noopener"><img id="pdbdevlogo" src="https://cdn.rcsb.org/rcsb-pdb/v2/common/images/pdb-dev-logo.png" alt="PDB-Dev Logo"></a></span></li></ul><div id="socialmedia_section"><ul class="fa-ul hidden-print"><li><a href="https://www.facebook.com/RCSBPDB" target="_blank" rel="noopener" title="Facebook" data-placement="top" data-toggle="tooltip"><i class="fa fa-facebook-square fa-lg"></i></a></li><li><a href="https://twitter.com/buildmodels" target="_blank" rel="noopener" title="Twitter" data-placement="top" data-toggle="tooltip"><i class="fa fa-twitter fa-lg"></i></a></li><li><a href="https://www.youtube.com/user/RCSBProteinDataBank" target="_blank" rel="noopener" title="YouTube" data-placement="top" data-toggle="tooltip"><i class="fa fa-youtube-play fa-lg"></i></a></li><li><a href="https://github.com/rcsb" target="_blank" rel="noopener" title="Github" data-placement="top" data-toggle="tooltip"><i class="fa fa-github fa-lg"></i></a></li><li><a href="https://www.linkedin.com/company/rcsb-protein-data-bank" target="_blank" rel="noopener" title="LinkedIn" data-placement="top" data-toggle="tooltip"><i class="fa fa-linkedin fa-lg"></i></a></li></ul></div></div></div></div></div><div class="container" id="maincontentcontainer"><style>p {font-size: 16px} ul li {font-size: 16px} div#docs-container { margin: 0; } span.glyphicon-new-window { font-size: 10px; } div .main-heading h1{ margin-top: 0; } div#helpmenu .small-menu { text-align: right; white-space: nowrap; /* Prevent text wrapping */ } div#helpmenu .small-menu p{ font-size: 15px; } div#helpmenu .small-menu a{ color: #325880; } div#helpmenu .divider { color: #5E5D5D; padding: 0 8px; } /* menu */ div#menu { border-bottom: 1px solid #ddd; } div#menu a { text-decoration: none; } div#menu-header { border-top: 1px solid #ddd; padding: 4px; } div.group { background-color: #f9f9f9; cursor: pointer; border-top: 1px solid #ddd; padding: 4px 0; } div.group table, div.group td:first-child, div.item table, div.item td:first-child { width: 100%; } div.item td { color: #337ab7; border-top: 1px solid #ddd; padding: 4px; } span.glyphicon-triangle-top, span.glyphicon-triangle-bottom { font-size: 8px; color: #666; } span.glyphicon-chevron-right { font-size: 10px; color: #337ab7; } /* add media query for mobile view */ @media (max-width: 768px) { /* optionally hide toggle icons on mobile */ span.glyphicon-triangle-top, span.glyphicon-triangle-bottom { display: none; } } /* item */ h5.menu-path { color: #666; } /* note: css defined here needs to be in sync with CMS Editor - TODO create a shared file on the CDN? */ a.content-anchor { display: block; position: relative; visibility: hidden; top: -60px; } table.content-resources { width: 100%; border-collapse: collapse; } table.content-resources td { border: 1px solid #ddd; vertical-align: top; padding: 5px; } td.content-img-caption { font-size: 16px; font-style: italic; padding: 5px 0; } img.content-img-border { border: 1px solid #ccc; } div.item-info { font-style: italic; font-size: 16px; color: #888; } div.ekko-lightbox div.modal-dialog { width: auto; max-width: 1170px; } </style><script>// groupMap passed from routes/docs.js var groupMap = {"5fca9f91eb210c2c564f0d7c":{"_id":"5fca9f91eb210c2c564f0d7c","depth":0,"name":"General Help","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["5fc537b03fb4b83beba83b23","5fc51a863fb4b83beb6e959f","63002035b05c2fccc1804d67","62d9b56b35ec5bb4ddb19a42","6003401bcff89d5fc8f8a3f3","6140b307ef055f03d1f222d2","60b686d701b8e50720f2ca63","6018251aecb9a74be53123a7","5fce4e38eb210c2c56790636","5fce5135eb210c2c567d7ab2","600756cec5ab5836659ab2e5","60ebb04e0882a5597783cc03","6080bf66ec901916050494bd","6005be80cff89d5fc8f8a3f5","5ff90b5af32c497fd6f7bf62","67224602e095838a1ce7d99f"],"show":true},"5fbe8e183fb4b83beb4d0e39":{"_id":"5fbe8e183fb4b83beb4d0e39","depth":0,"name":"Search and Browse","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["60006df7ae9f8477226a6c82","5ffde6ee3a38a923c3516cf2","60083954244a4309df45ad46","602c55d11a359e6e2d4a6ea7","6000bab4d3c1ff0cf1f44f48"],"show":true,"open":true},"60083954244a4309df45ad46":{"_id":"60083954244a4309df45ad46","depth":1,"name":"Advanced Search","parent_id":"5fbe8e183fb4b83beb4d0e39","type":"group","_ids":["5ffde93f3a38a923c3516cf3","5fbecb613fb4b83bebb5e353","600b08bec5ab5836659ab2e9","5ffde9d03a38a923c3516cf5","5ffdeaf53a38a923c3516cf6","5ffe9c743a38a923c3516cfb","600b3277c5ab5836659ab2ea","5ffe9da13a38a923c3516cfc","602c2b653fed9e549afd7917","600061f0ae9f8477226a6c81"],"show":true},"602c55d11a359e6e2d4a6ea7":{"_id":"602c55d11a359e6e2d4a6ea7","depth":1,"name":"Browse Options","parent_id":"5fbe8e183fb4b83beb4d0e39","type":"group","_ids":["602c53f43fed9e549afd7918","602c56893fed9e549afd791a","602c56b23fed9e549afd791b","646f8b661d621d75127a7a53","602c57773fed9e549afd791f","602c59ab3fed9e549afd7922","65d93e6f72841524659883e1","61410115ef055f03d1f222d3","602c59da3fed9e549afd7923","602c59f53fed9e549afd7924","602c57cf3fed9e549afd7921","6080adaaec901916050494bc","602c57ae3fed9e549afd7920","602c5a1e3fed9e549afd7925","602c57133fed9e549afd791d","602c57603fed9e549afd791e","6141014def055f03d1f222d4","602c56f13fed9e549afd791c"],"open":true,"show":true},"618271c92a7d828464a7d146":{"_id":"618271c92a7d828464a7d146","depth":0,"name":"Exploring a 3D Structure","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["618274c904fb9835c6ae189a","618271f904fb9835c6ae1892","6182729704fb9835c6ae1893","618272c004fb9835c6ae1894","618272e004fb9835c6ae1895","618272fb04fb9835c6ae1896","6182730904fb9835c6ae1897","6182731a04fb9835c6ae1898","6182732a04fb9835c6ae1899"],"show":true},"6256b2b3b4396e45e97bf3de":{"_id":"6256b2b3b4396e45e97bf3de","depth":0,"name":"Grouping Structures","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["62fbafaf3b6e49562fa5c055","6081c10aec901916050494be","6256b3269c3931864b07285b","6256b35e9c3931864b07285c","6364336066d6046810db7f11"],"show":true},"5fd3e3a6eb210c2c5632d098":{"_id":"5fd3e3a6eb210c2c5632d098","depth":0,"name":"3D Viewers","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["5f98cc9614cc37a34de620ea","60075352c5ab5836659ab2e3","65a4b499c76ca3abcc925d0d"],"show":true},"5f98cc9614cc37a34de620ea":{"_id":"5f98cc9614cc37a34de620ea","depth":1,"name":"Mol*","parent_id":"5fd3e3a6eb210c2c5632d098","type":"group","_ids":["5ee0fc4d25aa7b208a9fe39e","5ee107b225aa7b208a9fe3a1","5ee10ad725aa7b208a9fe3a2","5ee1046625aa7b208a9fe3a0","5ee1192f25aa7b208a9fe3a3","5ee13ac17f50f44e6aa4fb1f","5ee231607f50f44e6aa4fb20","5ee253237f50f44e6aa4fb22"]},"5fd3e3f4eb210c2c56332c65":{"_id":"5fd3e3f4eb210c2c56332c65","depth":0,"name":"Sequence Viewers","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["60103d1ab1afe64903398251","60342ff52087e87def0d0b09","5fc7f2843fb4b83beb6a7a3d","60182dc1ecb9a74be53123aa"],"show":true},"60132e62aeeea33d3f095fa8":{"_id":"60132e62aeeea33d3f095fa8","depth":0,"name":"Tools","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["60132e6a610d04019e01d4c2"],"show":true},"601024f3244a4309df5d6630":{"_id":"601024f3244a4309df5d6630","depth":0,"name":"Additional Resources","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["6010260ee244795fc6dcb836","6010260ee244795fc6dcb839","6010260ee244795fc6dcb838","63ee50cac031758bf1c30ff4","60135c8f236b8b22a9824a4a","6010260ee244795fc6dcb83a","6010260ee244795fc6dcb83d","6010260ee244795fc6dcb83c","6168521eef055f03d1f2231b","60102b1ab1afe6490339824f","6010260ee244795fc6dcb83e","6317770e831916e52206a1ea","63dc03c2c031758bf1c30ff0","6010260ee244795fc6dcb837"],"show":true},"600217ee5b6ad53203751b79":{"_id":"600217ee5b6ad53203751b79","depth":0,"name":"Programmatic Access","parent_id":"5fd18dfceb210c2c5634aead","type":"group","_ids":["602d94713fed9e549afd7926","60398336fec59804432bfc37","60183326ecb9a74be53123ab","610337d7ef055f03d1f222b9","60033e6ccff89d5fc8f8a3f2"],"show":true}} //log(groupMap, 'groupMap') // open/close group function toggle(_id) { var group = groupMap[_id] , _ids = group._ids // list of child _ids of this group , open = (group.open) ? true : false if (open) { closeGroup(group) // close group and all descendants } else { for (var i = 0, n = _ids.length; i < n; i++) $('#' + _ids[i]).removeClass('hidden').addClass('show') group.open = true $('#glyph' + _id).removeClass('glyphicon-triangle-bottom').addClass('glyphicon-triangle-top') } } // recursive function to close all descendants of a group function closeGroup(group) { if (group.open) { var _ids = group._ids // list of child _ids of this group for (var i = 0, n = _ids.length; i < n; i++) { var _id = _ids[i] $('#' + _id).removeClass('show').addClass('hidden') if (groupMap[_id]) closeGroup(groupMap[_id]) // recursive call } group.open = false $('#glyph' + group._id).removeClass('glyphicon-triangle-top').addClass('glyphicon-triangle-bottom') } } // log obj or primitive function log(o, s) { if (!s) s = typeof s if (typeof o === 'object') console.log(s + '=' + JSON.stringify(o, null, 2)) else console.log(s + '=' + o) } // function to close all open groups for mobile view function closeAllGroups() { for (var id in groupMap) { var group = groupMap[id]; if (group.open) { closeGroup(group); // Close the group if it's open } } } // function to check the screen size and close groups on mobile function handleResize() { var isMobileView = window.innerWidth <= 768; // mobile view threshold if (isMobileView) { closeAllGroups(); // close all groups if in mobile view } } // call handleResize on initial load and on window resize window.onload = handleResize; window.onresize = handleResize; </script><div id="docs-container"><div class="row"><div class="col-sm-9 main-heading"><h1>RCSB PDB Help</h1></div><div id="helpmenu"><div class="col-sm-3 small-menu"><p><i class="fa fa-home" aria-hidden="true"></i>&nbsp<a href="/help">Help Topics</a><span class="divider">| </span><i class="fa fa-question-circle" aria-hidden="true"></i>&nbsp<a href="/docs/general-help/website-faq">FAQs</a><span class="divider">| </span><i class="fa fa-book" aria-hidden="true"></i>&nbsp<a href="/docs/general-help/glossary">Glossary</a></p></div></div></div><div class="row"><div class="col-lg-3 col-md-4 col-sm-12 hidden-print"><div data-elastic-exclude><div id="menu"><div id="menu-header">Documentation</div><div class="group show" id="5fca9f91eb210c2c564f0d7c" onclick="toggle("5fca9f91eb210c2c564f0d7c")"><table><tr><td style="padding-left: 4px">General Help</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph5fca9f91eb210c2c564f0d7c"></span></td></tr></table></div><div class="item hidden" id="5fc537b03fb4b83beba83b23"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/organization-of-3d-structures-in-the-protein-data-bank">Organization of 3D Structures in the Protein Data Bank</a></td></tr></table></div><div class="item hidden" id="5fc51a863fb4b83beb6e959f"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/identifiers-in-pdb">Identifiers in PDB</a></td></tr></table></div><div class="item hidden" id="63002035b05c2fccc1804d67"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/assessing-the-quality-of-3d-structures">Assessing the Quality of 3D Structures</a></td></tr></table></div><div class="item hidden" id="62d9b56b35ec5bb4ddb19a42"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/computed-structure-models-and-rcsborg">Computed Structure Models and RCSB.org</a></td></tr></table></div><div class="item hidden" id="6003401bcff89d5fc8f8a3f3"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/data-from-external-resources-integrated-into-rcsb-pdb">Data From External Resources Integrated Into RCSB PDB</a></td></tr></table></div><div class="item hidden" id="6140b307ef055f03d1f222d2"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/symmetry-resources-in-the-pdb">Symmetry Resources in the PDB</a></td></tr></table></div><div class="item hidden" id="60b686d701b8e50720f2ca63"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/ligand-structure-quality-in-pdb-structures">Ligand Structure Quality in PDB Structures</a></td></tr></table></div><div class="item hidden" id="6018251aecb9a74be53123a7"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/web-services-overview">Web Services Overview</a></td></tr></table></div><div class="item hidden" id="5fce4e38eb210c2c56790636"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/x-ray-electron-density-maps">X-ray Electron Density Maps</a></td></tr></table></div><div class="item hidden" id="5fce5135eb210c2c567d7ab2"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/structures-without-legacy-pdb-format-files">Structures Without Legacy PDB Format Files</a></td></tr></table></div><div class="item hidden" id="600756cec5ab5836659ab2e5"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/deposition-resources">Deposition Resources</a></td></tr></table></div><div class="item hidden" id="60ebb04e0882a5597783cc03"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/software-supporters">Software Supporters</a></td></tr></table></div><div class="item hidden" id="6080bf66ec901916050494bd"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/membrane-protein-resources">Membrane Protein Resources</a></td></tr></table></div><div class="item hidden" id="6005be80cff89d5fc8f8a3f5"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/website-faq">Website FAQ</a></td></tr></table></div><div class="item hidden" id="5ff90b5af32c497fd6f7bf62"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/glossary">Glossary</a></td></tr></table></div><div class="item hidden" id="67224602e095838a1ce7d99f"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/general-help/help-topics-home">Help Topics Home</a></td></tr></table></div><div class="group show" id="5fbe8e183fb4b83beb4d0e39" onclick="toggle("5fbe8e183fb4b83beb4d0e39")"><table><tr><td style="padding-left: 4px">Search and Browse</td><td><span class="glyphicon glyphicon-triangle-top" id="glyph5fbe8e183fb4b83beb4d0e39"></span></td></tr></table></div><div class="item show" id="60006df7ae9f8477226a6c82"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/search-and-browse/overview-search-and-browse">Overview: Search and Browse</a></td></tr></table></div><div class="item show" id="5ffde6ee3a38a923c3516cf2"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/search-and-browse/basic-search">Basic Search</a></td></tr></table></div><div class="group show" id="60083954244a4309df45ad46" onclick="toggle("60083954244a4309df45ad46")"><table><tr><td style="padding-left: 24px">Advanced Search</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph60083954244a4309df45ad46"></span></td></tr></table></div><div class="item hidden" id="5ffde93f3a38a923c3516cf3"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/overview-advanced-search">Overview: Advanced Search</a></td></tr></table></div><div class="item hidden" id="5fbecb613fb4b83bebb5e353"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/attribute-search">Attribute Search</a></td></tr></table></div><div class="item hidden" id="600b08bec5ab5836659ab2e9"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/attribute-details">Attribute Details</a></td></tr></table></div><div class="item hidden" id="5ffde9d03a38a923c3516cf5"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/sequence-similarity-search">Sequence Similarity Search</a></td></tr></table></div><div class="item hidden" id="5ffdeaf53a38a923c3516cf6"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/sequence-motif-search">Sequence Motif Search</a></td></tr></table></div><div class="item hidden" id="5ffe9c743a38a923c3516cfb"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/structure-similarity-search">Structure Similarity Search</a></td></tr></table></div><div class="item hidden" id="600b3277c5ab5836659ab2ea"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/structure-motif-search">Structure Motif Search</a></td></tr></table></div><div class="item hidden" id="5ffe9da13a38a923c3516cfc"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/chemical-similarity-search">Chemical Similarity Search</a></td></tr></table></div><div class="item hidden" id="602c2b653fed9e549afd7917"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/chemical-sketch-tool">Chemical Sketch Tool</a></td></tr></table></div><div class="item hidden" id="600061f0ae9f8477226a6c81"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/advanced-search/search-examples">Search Examples</a></td></tr></table></div><div class="group show" id="602c55d11a359e6e2d4a6ea7" onclick="toggle("602c55d11a359e6e2d4a6ea7")"><table><tr><td style="padding-left: 24px">Browse Options</td><td><span class="glyphicon glyphicon-triangle-top" id="glyph602c55d11a359e6e2d4a6ea7"></span></td></tr></table></div><div class="item show" id="602c53f43fed9e549afd7918"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/overview-browse">Overview: Browse</a></td></tr></table></div><div class="item show" id="602c56893fed9e549afd791a"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/atc">ATC</a></td></tr></table></div><div class="item show" id="602c56b23fed9e549afd791b"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/biological-process">Biological Process</a></td></tr></table></div><div class="item show" id="646f8b661d621d75127a7a53"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/card">CARD</a></td></tr></table></div><div class="item show" id="602c57773fed9e549afd791f"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/cath">CATH</a></td></tr></table></div><div class="item show" id="602c59ab3fed9e549afd7922"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/cellular-component">Cellular Component</a></td></tr></table></div><div class="item show" id="65d93e6f72841524659883e1"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/disease-ontology">Disease Ontology</a></td></tr></table></div><div class="item show" id="61410115ef055f03d1f222d3"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/ecod">ECOD</a></td></tr></table></div><div class="item show" id="602c59da3fed9e549afd7923"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/enzyme-classification">Enzyme Classification</a></td></tr></table></div><div class="item show" id="602c59f53fed9e549afd7924"><table><tr><td class="title" style="padding-left: 44px"><a class="docs-index-link" href="/docs/search-and-browse/browse-options/genome-location">Genome Location</a></td><td><span class="glyphicon glyphicon-chevron-right"></span></td></tr></table></div><div class="item show" id="602c57cf3fed9e549afd7921"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/mesh">MeSH</a></td></tr></table></div><div class="item show" id="6080adaaec901916050494bc"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/membrane-protein-opm">Membrane Protein (OPM)</a></td></tr></table></div><div class="item show" id="602c57ae3fed9e549afd7920"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/molecular-function">Molecular Function</a></td></tr></table></div><div class="item show" id="602c5a1e3fed9e549afd7925"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/membrane-protein-mpstruc">Membrane Protein (mpstruc)</a></td></tr></table></div><div class="item show" id="602c57133fed9e549afd791d"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/protein-symmetry">Protein Symmetry</a></td></tr></table></div><div class="item show" id="602c57603fed9e549afd791e"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/scop-e">SCOP-e</a></td></tr></table></div><div class="item show" id="6141014def055f03d1f222d4"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/scop2">SCOP2</a></td></tr></table></div><div class="item show" id="602c56f13fed9e549afd791c"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/search-and-browse/browse-options/source-organism">Source Organism</a></td></tr></table></div><div class="item show" id="6000bab4d3c1ff0cf1f44f48"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/search-and-browse/mypdb">MyPDB</a></td></tr></table></div><div class="group show" id="618271c92a7d828464a7d146" onclick="toggle("618271c92a7d828464a7d146")"><table><tr><td style="padding-left: 4px">Exploring a 3D Structure</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph618271c92a7d828464a7d146"></span></td></tr></table></div><div class="item hidden" id="618274c904fb9835c6ae189a"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/overview">Overview</a></td></tr></table></div><div class="item hidden" id="618271f904fb9835c6ae1892"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/structure-summary-page">Structure Summary Page</a></td></tr></table></div><div class="item hidden" id="6182729704fb9835c6ae1893"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/structure">Structure</a></td></tr></table></div><div class="item hidden" id="618272c004fb9835c6ae1894"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/annotations">Annotations</a></td></tr></table></div><div class="item hidden" id="618272e004fb9835c6ae1895"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/experiment">Experiment</a></td></tr></table></div><div class="item hidden" id="618272fb04fb9835c6ae1896"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/sequence">Sequence</a></td></tr></table></div><div class="item hidden" id="6182730904fb9835c6ae1897"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/genome">Genome</a></td></tr></table></div><div class="item hidden" id="6182731a04fb9835c6ae1898"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/ligands">Ligands</a></td></tr></table></div><div class="item hidden" id="6182732a04fb9835c6ae1899"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/exploring-a-3d-structure/versions">Versions</a></td></tr></table></div><div class="group show" id="6256b2b3b4396e45e97bf3de" onclick="toggle("6256b2b3b4396e45e97bf3de")"><table><tr><td style="padding-left: 4px">Grouping Structures</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph6256b2b3b4396e45e97bf3de"></span></td></tr></table></div><div class="item hidden" id="62fbafaf3b6e49562fa5c055"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/grouping-structures/overview-grouping-structures">Overview: Grouping Structures</a></td></tr></table></div><div class="item hidden" id="6081c10aec901916050494be"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/grouping-structures/sequence-based-clustering">Sequence-based Clustering</a></td></tr></table></div><div class="item hidden" id="6256b3269c3931864b07285b"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/grouping-structures/grouping-search-results">Grouping Search Results</a></td></tr></table></div><div class="item hidden" id="6256b35e9c3931864b07285c"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/grouping-structures/group-summary-pages">Group Summary Pages</a></td></tr></table></div><div class="item hidden" id="6364336066d6046810db7f11"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/grouping-structures/explore-sequence-alignments-in-3d">Explore Sequence Alignments in 3D</a></td></tr></table></div><div class="group show" id="5fd3e3a6eb210c2c5632d098" onclick="toggle("5fd3e3a6eb210c2c5632d098")"><table><tr><td style="padding-left: 4px">3D Viewers</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph5fd3e3a6eb210c2c5632d098"></span></td></tr></table></div><div class="group hidden" id="5f98cc9614cc37a34de620ea" onclick="toggle("5f98cc9614cc37a34de620ea")"><table><tr><td style="padding-left: 24px">Mol*</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph5f98cc9614cc37a34de620ea"></span></td></tr></table></div><div class="item hidden" id="5ee0fc4d25aa7b208a9fe39e"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/getting-started">Getting Started</a></td></tr></table></div><div class="item hidden" id="5ee107b225aa7b208a9fe3a1"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/maneuvering-in-mol*">Maneuvering in Mol*</a></td></tr></table></div><div class="item hidden" id="5ee10ad725aa7b208a9fe3a2"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/making-selections">Making Selections</a></td></tr></table></div><div class="item hidden" id="5ee1046625aa7b208a9fe3a0"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/navigating-by-sequence">Navigating by Sequence</a></td></tr></table></div><div class="item hidden" id="5ee1192f25aa7b208a9fe3a3"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/managing-the-display">Managing the Display</a></td></tr></table></div><div class="item hidden" id="5ee13ac17f50f44e6aa4fb1f"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/common-actions">Common Actions</a></td></tr></table></div><div class="item hidden" id="5ee231607f50f44e6aa4fb20"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/faqs-scenarios">FAQs/Scenarios</a></td></tr></table></div><div class="item hidden" id="5ee253237f50f44e6aa4fb22"><table><tr><td class="title" style="padding-left: 44px"><a href="/docs/3d-viewers/mol*/mol*-cheat-sheet">Mol* Cheat Sheet</a></td></tr></table></div><div class="item hidden" id="60075352c5ab5836659ab2e3"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/3d-viewers/jmol">Jmol</a></td></tr></table></div><div class="item hidden" id="65a4b499c76ca3abcc925d0d"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/3d-viewers/ngl-to-mol*-ui-migration-guide">NGL to Mol* UI Migration Guide</a></td></tr></table></div><div class="group show" id="5fd3e3f4eb210c2c56332c65" onclick="toggle("5fd3e3f4eb210c2c56332c65")"><table><tr><td style="padding-left: 4px">Sequence Viewers</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph5fd3e3f4eb210c2c56332c65"></span></td></tr></table></div><div class="item hidden" id="60103d1ab1afe64903398251"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/sequence-viewers/sequence-annotations-viewer">Sequence Annotations Viewer</a></td></tr></table></div><div class="item hidden" id="60342ff52087e87def0d0b09"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/sequence-viewers/sequence-annotations-in-3d">Sequence Annotations in 3D</a></td></tr></table></div><div class="item hidden" id="5fc7f2843fb4b83beb6a7a3d"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/sequence-viewers/genome-view">Genome View</a></td></tr></table></div><div class="item hidden" id="60182dc1ecb9a74be53123aa"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/sequence-viewers/protein-sequence-alignment-view">Protein Sequence Alignment View</a></td></tr></table></div><div class="group show" id="60132e62aeeea33d3f095fa8" onclick="toggle("60132e62aeeea33d3f095fa8")"><table><tr><td style="padding-left: 4px">Tools</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph60132e62aeeea33d3f095fa8"></span></td></tr></table></div><div class="item hidden" id="60132e6a610d04019e01d4c2"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/tools/pairwise-structure-alignment">Pairwise Structure Alignment</a></td></tr></table></div><div class="group show" id="601024f3244a4309df5d6630" onclick="toggle("601024f3244a4309df5d6630")"><table><tr><td style="padding-left: 4px">Additional Resources</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph601024f3244a4309df5d6630"></span></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb836"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/3d-printing">3D Printing</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb839"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/databases-and-knowledgebases">Databases and Knowledgebases</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb838"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/crystallography-software">Crystallography Software</a></td></tr></table></div><div class="item hidden" id="63ee50cac031758bf1c30ff4"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/electron-microscopy-software">Electron Microscopy Software</a></td></tr></table></div><div class="item hidden" id="60135c8f236b8b22a9824a4a"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/modeling-and-simulation-software">Modeling and Simulation Software</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb83a"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/file-readers">File Readers</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb83d"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/nmr-software">NMR Software</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb83c"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/molecular-graphics-software">Molecular Graphics Software</a></td></tr></table></div><div class="item hidden" id="6168521eef055f03d1f2231b"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/sars-cov-2-and-covid-19">SARS-CoV-2 and COVID-19</a></td></tr></table></div><div class="item hidden" id="60102b1ab1afe6490339824f"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/sequence-analysis">Sequence Analysis</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb83e"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/structure-classification-and-analysis">Structure Classification and Analysis</a></td></tr></table></div><div class="item hidden" id="6317770e831916e52206a1ea"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/structure-prediction">Structure Prediction</a></td></tr></table></div><div class="item hidden" id="63dc03c2c031758bf1c30ff0"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/data-management-standards-and-best-practices">Data Management Standards and Best Practices</a></td></tr></table></div><div class="item hidden" id="6010260ee244795fc6dcb837"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/additional-resources/structure-validation-and-quality">Structure Validation and Quality</a></td></tr></table></div><div class="group show" id="600217ee5b6ad53203751b79" onclick="toggle("600217ee5b6ad53203751b79")"><table><tr><td style="padding-left: 4px">Programmatic Access</td><td><span class="glyphicon glyphicon-triangle-bottom" id="glyph600217ee5b6ad53203751b79"></span></td></tr></table></div><div class="item hidden" id="602d94713fed9e549afd7926"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/programmatic-access/file-download-services">File Download Services</a></td></tr></table></div><div class="item hidden" id="60398336fec59804432bfc37"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/programmatic-access/web-apis-overview">Web APIs Overview</a></td></tr></table></div><div class="item hidden" id="60183326ecb9a74be53123ab"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/programmatic-access/batch-downloads-with-shell-script">Batch Downloads with Shell Script</a></td></tr></table></div><div class="item hidden" id="610337d7ef055f03d1f222b9"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/programmatic-access/migrating-from-legacy-apis">Migrating from Legacy APIs</a></td></tr></table></div><div class="item hidden" id="60033e6ccff89d5fc8f8a3f2"><table><tr><td class="title" style="padding-left: 24px"><a href="/docs/programmatic-access/access-to-legacy-theoretical-models">Access to Legacy Theoretical Models</a></td></tr></table></div></div></div></div><div class="col-lg-9 col-md-8 col-sm-12 content-item"><div data-elastic-include><h5 class="menu-path">Search and Browse > Browse Options</h5><h1>Genome Location</h1><div><a class="content-anchor" id="what-is-genome-location-browser"></a> <h4>What is Genome Location Browser?</h4> <p>The genome browser is a hierarchical representation of structures from genomes of various organisms. <br /><br />RCSB PDB has mapped the structures to the chromosomal loci based on UniProtKB/GenBank accession numbers associated with the structures and the loci. The genomes represented are a subset of the genomes in the NCBI genome database and whose curated sequences for genetic loci are archived at <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene">Entrez Gene</a>. The top level in the hierarchy is the organism's genome. Each genome expands into chromosomes which in turn expand into a list of loci on the chromosomes. Each locus is a link to retrieve structures associated with it.</p> <a class="content-anchor" id="why-browse-by-genome-location"></a> <h4>Why Browse by Genome Location?</h4> <p>Here you can search for an organism's name and browse through genes in the organism by Chromosomes or gene names. You can also search the mapped structures using their names.</p> <a class="content-anchor" id="how-to-use-the-genome-location-browser"></a> <h4>How to use the <a href="/search/browse/genome_location" target="_blank">Genome Location Browser</a>?</h4> <p>This browser combines two different ways of organizing polymer entities - by organism and by position of the gene of interest in a chromosome.</p> <ul style="list-style-type:disc;"> <li>You can search for a specific gene by its name and find the first instance of it in any organism included in the browser.</li> <li>If you are looking for a gene in a specific organism you can first search for the organism by its name and then </li> <ul style="list-style-type:disc;"> <li>browse through all the chromosomes to find the gene of interest, OR</li> <li>find the chromosome number on which the gene of interest is located and browse the relevant chromosome. To find the chromosome number where the gene of interest is located you can search for the organism and gene name in the <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene">Entrez Gene</a> website. </li> </ul> </ul> <div style="height: 20px;"></div><p>Once you have identified a gene of interest in the organism of your choice, you can view the number of associated polymer entities in the PDB, and select from them the ones to explore.</p> <a class="content-anchor" id="examples"></a> <h4>Examples</h4> <p>1. Search for TEM-1 Class A Broad Spectrum beta-lactamase protein in <i>E. coli</i></p> <ul style="list-style-type:disc;"> <li>Type the name of the organism "<i>Escherichia coli</i>" or "(<i>E. coli</i>) " in the search box at the top of the page and click on search</li> <li>Scroll down the page to where the selected organism is highlighted in the browse tree - click on the arrowhead (triangle) next to the organism name to open the genes listed under it.</li> <li>The numbers listed next to the gene name (<b>class A broad-spectrum beta-lactamase TEM-1</b>) indicate the number of polymer entities that match the gene name. Clicking on it will launch a search for all polymer entities in the PDB that are associated with the organism and gene name.</li> </ul> <div style="height: 20px;"></div><p>2. Search for <b>Cadherin 1</b> in <i>Homo sapiens</i></p> <ul style="list-style-type:disc;"> <li>Type the name of the organism "<i>Homo sapiens</i>" in the search box at the top of the page and click on search</li> <li>Scroll down the page to where the selected organism is highlighted in the browse tree - click on the arrowhead (triangle) next to the organism name to open the chromosomes listed under it.</li> <li>To find out the chromosome that includes the gene of interest, do a quick check in the <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene">Entrez Gene</a> website on a new browser window or tab. Open this page and type "Homo sapiens cadherin 1" in the top search box. Scan the page showing the results of the search and note the chromosome number (16) on which the gene is located. </li> <li>Come back RCSB page where you have the Genome Location Browser open and click on the arrowhead (triangle) next to the <b>Chromosome 16</b> to view the genes listed under it. Note only genes whose proteins are present in the PDB are listed here. </li> <li>The numbers listed next to the gene name (<b>Cadherin 1</b>) indicate the number of polymer entities that match the gene name. Clicking on it will launch a search for all polymer entities in the PDB that are associated with the organism and gene name.</li> </ul> <div style="height: 20px;"></div></div></div><br><hr><div class="item-info"><div>Please report any encountered broken links to <a href='mailto:info@rcsb.org'>info@rcsb.org</a></div><div>Last updated: 6/25/2024</div></div></div></div></div></div><div data-elastic-exclude><div class="hidden-print" id="footer_main"><div class="container" style="padding:0"><div class="row"><div class="col-md-6 col-sm-12" style="padding-left:0"> <div class="row"><div class="col-sm-4"><ul><li><span class="row_header">About</span></li><li><a href="/pages/about-us/index">About Us</a></li><li><a href="/pages/policies#References">Citing Us</a></li><li><a href="/pages/publications">Publications</a></li><li><a href="/pages/team">Team</a></li><li><a href="/pages/jobs">Careers</a></li><li><a href="/pages/policies">Usage & Privacy</a></li></ul></div><div class="col-sm-4" style="padding-left:0"><ul><li><span class="row_header">Support</span></li><li><a href="/pages/contactus">Contact Us</a></li><li><a href="/help">Help</a></li><li><a href="/docs/general-help/website-faq">Website FAQ</a></li><li><a href="/docs/general-help/glossary">Glossary</a></li><li><a href="https://status.rcsb.org/" target="_blank">Service Status</a></li></ul></div><div class="col-md-4 hidden-sm"></div></div></div><div class="col-md-6 col-sm-12" style="padding-left:5px"> <div class="row"><div class="col-sm-4"><p class="row_header">RCSB PDB is hosted by</p><div class="footerLogos"><hr><a href="http://www.rutgers.edu/"><img class="Rutgerslogo" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/Logo_Rutgers-2024.png" alt="Rutgers University logo"></a><hr><a href="https://ucsd.edu/"><img class="UCSDlogo" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/Logo_UCSD-navy.png" alt="Uiversity of California San Diego logo"></a><a href="https://www.sdsc.edu/"><img class="SDSClogo" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/Logo_SDSC-black.png" alt="San Diego Supercomputer Center logo"></a><hr><a href="https://www.ucsf.edu/"><img class="UCSFlogo" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/Logo_UCSF.png" alt="University of California San Francisco Logo"></a></div></div><div class="col-sm-4"><p class="row_header">RCSB PDB is a member of the</p><div class="footerLogos"><span id="pdbmembers_footer"><hr><a href="https://www.wwpdb.org" target="_blank" rel="noopener"><img class="wwpdblogo" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/Logo_wwpdb.png" alt="wwPDB"></a><hr><a href="https://www.emdataresource.org" target="_blank" rel="noopener"><img id="emdatabanklogo_footer" src="https://cdn.rcsb.org/rcsb-pdb//v2/common/images/EMDataResourcelogo.png" alt="EMDataResource"></a></span></div></div><div class="col-sm-4"><ul><li><span class="row_header">RCSB Partners</span></li><li><a href="https://nakb.org/" target="_blank" rel="noopener">Nucleic Acid Knowledgebase</a></li></ul><ul><li><span class="row_header"><a href="https://www.wwpdb.org/" target="_blank" rel="noopener" style="text-decoration: none; color: black">wwPDB Partners</a></span></li><li><a href="/">RCSB PDB</a></li><li><a href="https://www.ebi.ac.uk/pdbe/" target="_blank" rel="noopener">PDBe</a></li><li><a href="https://www.pdbj.org/" target="_blank" rel="noopener">PDBj</a></li><li><a href="https://bmrb.io/" target="_blank" rel="noopener">BMRB</a></li><li><a href="https://emdb-empiar.org/" target="_blank" rel="noopener">EMDB</a></li></ul></div></div></div></div></div></div><div id="footer_grant"><div class="container"><div class="row"><p>RCSB PDB Core Operations are funded by the <a href="http://www.nsf.gov/" target="_blank" rel="noopener">U.S. National Science Foundation</a> (DBI-2321666), the <a href="http://science.energy.gov/" target="_blank" rel="noopener">US Department of Energy</a> (DE-SC0019749), and the <a href="http://www.cancer.gov/" target="_blank" rel="noopener">National Cancer Institute</a>, <a href="http://www.niaid.nih.gov/" target="_blank" rel="noopener">National Institute of Allergy and Infectious Diseases</a>, and <a href="http://www.nigms.nih.gov/" target="_blank" rel="noopener">National Institute of General Medical Sciences</a> of the <a href="http://www.nih.gov/" target="_blank" rel="noopener">National Institutes of Health</a> under grant R01GM157729.</p></div></div></div><div id="jira-fdbck"></div></div></div></body></html>