2023 07 11 | Open Microscopy Environment (OME)

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margin-left: 10px;">Explore</a></li> <li class="show-for-small-only"><a href="/explore/">Explore</a></li> </ul> </div> </div>  <a name="top-of-page"></a>  <div class="callout large primary" id="bg-image-announcements"> <div class="row column text-center"> <h1>2023 07 11</h1> <p></p> </div> </div> <hr class="invisible"> <div class="text-center"> <a id="back-to-top" href="/announcements/"><i class="fa fa-arrow-left"></i> back to Announcements</a> </div> <hr class="invisible"> <div class="row"> <div class="columns"> <h1 id="2023-07-11">2023-07-11</h1> <p>Attending: Will, David, June, Dom, Frances, Richard, Melissa, Kyle, Tom, Jason, Maadhav, David S, Kevin, Chris, Erin</p> <p>Start: 2:00 pm UK</p> <h2 id="accepting-minutes-from-last-meeting">Accepting minutes from <a href="https://hackmd.io/team/ome?nav=overview">last meeting</a></h2> <h2 id="project-status">Project Status</h2> <p>(2-3 minutes each)</p> <ul> <li>IDR (Frances): <ul> <li>preparing for next release (prod117): idr0119 early next week</li> <li>Next release (prod118) in August</li> <li>Then prep for software upgrade NGFF</li> <li>Will: NGFF conversion in progress or done for most studies. Few outstanding - will try to guage timeline</li> </ul> </li> <li>OMERO <ul> <li>omero-py TLS cleanup. Setting up test environments to test SSL etc on various platforms</li> <li>Django 4.2 PR ready for review. Will to review this week</li> </ul> </li> <li>Bio-Formats <ul> <li>6.14.0 release last week - deprecation warnings</li> <li>Actual deprecations in 7.0.0 release. Aim to release first week of August</li> <li>ZarrReader focus next few days - fixes and Fiji update site</li> </ul> </li> <li> <p>NGFF</p> </li> <li>GerBI (Tom) <ul> <li>omero webtagging: split into 2 new repos, deprecating old repo, Pypi updates etc.</li> </ul> </li> <li>Glencoe (Chris) <ul> <li>see above omero/web. Prep for new Linux distributions etc.</li> <li>microservices - removing support for older OMERO versions <ul> <li>using JSON for sessions instead of pickling</li> <li>improve reuse e.g. by searchengine</li> </ul> </li> <li>Erin: <a href="https://www.glencoesoftware.com/blog/2023/07/10/whats-new-in-ngff-converter-1-1-5.html">NGFF-converter released with latest bioformats2raw</a> <ul> <li>Jason: mention on image.sc?</li> </ul> </li> </ul> </li> <li>Community <ul> <li>HDBI (Richard) <ul> <li>Host OMERO server in Newcastle</li> </ul> </li> <li>Petr and Jean-Marie in Kobe</li> </ul> </li> </ul> <h2 id="aob">AOB</h2> <p>(5 min. max; tech. 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2023 07 11 | Open Microscopy Environment (OME)