Ensembl Protists Archive

<!DOCTYPE html> <html lang="en-gb"> <head> <title>Ensembl Protists Archive</title> <link rel="stylesheet" type="text/css" media="all" href="/minified/cb3f98d4448fe40c20f0ab77d665ad2c.css"/><link rel="stylesheet" type="text/css" media="all" href="/minified/6fbe8f175a5a6de1ca00fa114c237b15.image.css"/> <link rel="icon" href="/i/ensembl-favicon.png" type="image/png" /> <link href="/apple-touch-icon.png" type="image/png" rel="apple-touch-icon" /> <link type="application/opensearchdescription+xml" href="//sep2018-protists.ensembl.org/opensearch/all.xml" rel="search" title="Ensembl (All)" /> <meta name="google-site-verification" content="tG3WW0bg9gNaIHH002gJl-fV2k0bzf-ZxC8pBqXTaNo" /> <meta name="viewport" content="target-densitydpi=device-dpi, width=device-width, initial-scale=1.0, maximum-scale=2.0, user-scalable=yes" /> <script>var prefetch = [];</script> </head> <body class="ie ie7 ie67 no_tabs static" data-pace="2" id="ensembl-webpage"> <div id="min_width_container"> <div id="min_width_holder"> <div id="masthead" class="js_panel"> <input type="hidden" class="panel_type" value="Masthead" /> <div class="logo_holder"><a href="http://www.ensemblgenomes.org/"><img src="/i/e.png" alt="Ensembl Genomes Home" title="Ensembl Genomes Home" class="print_hide" style="width:43px;height:40px" /></a><a href="/"><img src="/i/archive-protists.png" alt="Archive protists Home" title="Archive protists Home" class="print_hide" style="width:191px;height:40px" /></a><img src="/i/e-ensembl_print.gif" alt="Archive protists Home" title="Archive protists Home" class="screen_hide_inline" style="width:191px;height:40px" /> <span class="print_hide"> <span id="site_menu_button"></span> </span> </div> <div class="mh print_hide"> <div class="account_holder"></div> <div class="tools_holder"><ul class="tools"><li><a class="constant" href="/biomart/martview">BioMart</a></li><li><a class="constant" href="/info/website/ftp/index.html">Downloads</a></li><li><a class="constant" href="/info">Documentation</a></li><li class="last"><a class="constant" href="/info/website/index.html">Website help</a></li></ul><div class="more"><a href="#">More <span class="arrow">▼</span></a></div></div> <div class="search_holder print_hide"></div> </div> </div> <div id="main_holder"> <div id="widemain"> <div id="static"><div class="column-wrapper"> <div class="column-two"> <div class="column-padding no-left-margin"> <div class="tinted-box no-top-margin"> <div id="SpeciesSearch" class="js_panel"><input type="hidden" class="panel_type" value="SearchBox" /><form class="search-form no-sel clear homepage-search-form" action="/Multi/Psychic" method="get"><fieldset><input name="site" value="ensemblunit" type="hidden" /><div class="form-field"><div class="ff-right"><h3>Search</h3></div></div><div class="form-field"><div class="ff-right"><select id="species" name="species" class="input fselect"><option value="">All species</option><option value="help">Help and Documentation</option><option value="" disabled="disabled">---</option><optgroup label="Favourite species"><option value="Plasmodium_falciparum">Plasmodium falciparum 3D7</option><option value="Dictyostelium_discoideum">Dictyostelium discoideum</option><option value="Phytophthora_infestans">Phytophthora infestans</option><option value="Leishmania_major">Leishmania major</option></optgroup><option value="" disabled="disabled">---</option><option value="Acanthamoeba_castellanii_str_neff_gca_000313135">Acanthamoeba castellanii str. Neff (GCA_000313135.1)</option><option value="Achlya_hypogyna_gca_002081595">Achlya hypogyna str. ATCC 48635 (GCA_002081595.1)</option><option value="Albugo_laibachii">Albugo laibachii</option><option value="Angomonas_deanei_gca_000442575">Angomonas deanei (GCA_000442575.2)</option><option value="Aphanomyces_astaci_gca_002197585">Aphanomyces astaci (GCA_002197585.2)</option><option value="Aphanomyces_astaci_gca_003546545">Aphanomyces astaci (GCA_003546545.1)</option><option value="Aphanomyces_astaci_gca_003546565">Aphanomyces astaci (GCA_003546565.1)</option><option value="Aphanomyces_astaci_gca_003546585">Aphanomyces astaci (GCA_003546585.1)</option><option value="Aphanomyces_astaci_gca_003546605">Aphanomyces astaci (GCA_003546605.1)</option><option value="Aphanomyces_astaci_gca_003546625">Aphanomyces astaci (GCA_003546625.1)</option><option value="Aphanomyces_astaci_gca_003546765">Aphanomyces astaci (GCA_003546765.1)</option><option value="Aphanomyces_astaci_gca_003546785">Aphanomyces astaci (GCA_003546785.1)</option><option value="Aphanomyces_astaci_gca_003546805">Aphanomyces astaci (GCA_003546805.1)</option><option value="Aphanomyces_astaci_gca_003546825">Aphanomyces astaci (GCA_003546825.1)</option><option value="Aphanomyces_astaci_gca_003666305">Aphanomyces astaci (GCA_003666305.1)</option><option value="Aphanomyces_astaci_gca_000520075">Aphanomyces astaci str. APO3 (GCA_000520075.1)</option><option value="Aphanomyces_invadans_gca_003546525">Aphanomyces invadans (GCA_003546525.1)</option><option value="Aphanomyces_invadans_gca_000520115">Aphanomyces invadans str. NJM9701 (GCA_000520115.1)</option><option value="Aureococcus_anophagefferens_gca_000186865">Aureococcus anophagefferens (GCA_000186865.1)</option><option value="Babesia_bigemina_gca_000981445">Babesia bigemina str. Bond (GCA_000981445.1)</option><option value="Babesia_bovis_gca_000165395">Babesia bovis str. T2Bo (GCA_000165395.1)</option><option value="Babesia_ovata_gca_002897235">Babesia ovata str. Miyake (GCA_002897235.1)</option><option value="Babesia_sp_xinjiang_gca_002095265">Babesia sp. Xinjiang (GCA_002095265.1)</option><option value="Besnoitia_besnoiti_gca_002563875">Besnoitia besnoiti str. Bb-Ger1 (GCA_002563875.1)</option><option value="Bigelowiella_natans">Bigelowiella natans</option><option value="Blastocystis_hominis_gca_000151665">Blastocystis hominis str. Singapore isolate B (sub-type 7) (GCA_000151665.1)</option><option value="Capsaspora_owczarzaki_atcc_30864_gca_000151315">Capsaspora owczarzaki ATCC 30864 (GCA_000151315.2)</option><option value="Cavenderia_fasciculata_gca_000203815">Cavenderia fasciculata str. SH3 (GCA_000203815.1)</option><option value="Chroomonas_mesostigmatica_ccmp1168_gca_000286095">Chroomonas mesostigmatica CCMP1168 (GCA_000286095.1)</option><option value="Cryptomonas_paramecium_gca_000194455">Cryptomonas paramecium str. CCAP977/2A (GCA_000194455.1)</option><option value="Cryptosporidium_andersoni_gca_001865355">Cryptosporidium andersoni (GCA_001865355.1)</option><option value="Cryptosporidium_meleagridis_gca_001593445">Cryptosporidium meleagridis str. UKMEL1 (GCA_001593445.1)</option><option value="Cryptosporidium_muris_rn66_gca_000006515">Cryptosporidium muris RN66 (GCA_000006515.1)</option><option value="Cryptosporidium_parvum_iowa_ii_gca_000165345">Cryptosporidium parvum Iowa II (GCA_000165345.1)</option><option value="Cryptosporidium_ubiquitum_gca_001865345">Cryptosporidium ubiquitum (GCA_001865345.1)</option><option value="Cyclospora_cayetanensis_gca_000769155">Cyclospora cayetanensis str. CHN_HEN01 (GCA_000769155.2)</option><option value="Cystoisospora_suis_gca_002600585">Cystoisospora suis str. Wien I (GCA_002600585.1)</option><option value="Dictyostelium_discoideum">Dictyostelium discoideum</option><option value="Dictyostelium_purpureum_gca_000190715">Dictyostelium purpureum str. QSDP1 (GCA_000190715.1)</option><option value="Ectocarpus_siliculosus_gca_000310025">Ectocarpus siliculosus str. Ec 32 (CCAP 1310/04) (GCA_000310025.1)</option><option value="Eimeria_acervulina_gca_000499425">Eimeria acervulina (GCA_000499425.1)</option><option value="Eimeria_brunetti_gca_000499725">Eimeria brunetti (GCA_000499725.1)</option><option value="Eimeria_maxima_gca_000499605">Eimeria maxima str. Weybridge (GCA_000499605.1)</option><option value="Eimeria_mitis_gca_000499745">Eimeria mitis (GCA_000499745.1)</option><option value="Eimeria_praecox_gca_000499445">Eimeria praecox (GCA_000499445.1)</option><option value="Eimeria_tenella_gca_000499545">Eimeria tenella str. Houghton (GCA_000499545.1)</option><option value="Emiliania_huxleyi">Emiliania huxleyi</option><option value="Entamoeba_dispar_saw760_gca_000209125">Entamoeba dispar SAW760 (GCA_000209125.2)</option><option value="Entamoeba_histolytica">Entamoeba histolytica</option><option value="Entamoeba_histolytica_hm_1_imss_a_gca_000365475">Entamoeba histolytica HM-1:IMSS-A (GCA_000365475.1)</option><option value="Entamoeba_histolytica_hm_1_imss_b_gca_000344925">Entamoeba histolytica HM-1:IMSS-B str. HM3:IMSS-B (GCA_000344925.1)</option><option value="Entamoeba_histolytica_hm_3_imss_gca_000346345">Entamoeba histolytica HM-3:IMSS (GCA_000346345.1)</option><option value="Entamoeba_histolytica_ku27_gca_000338855">Entamoeba histolytica KU27 (GCA_000338855.1)</option><option value="Entamoeba_histolytica_gca_001662325">Entamoeba histolytica str. HM1:IMSS clone 6 (GCA_001662325.1)</option><option value="Entamoeba_invadens_ip1_gca_000330505">Entamoeba invadens IP1 (GCA_000330505.1)</option><option value="Entamoeba_nuttalli_p19_gca_000257125">Entamoeba nuttalli P19 (GCA_000257125.1)</option><option value="Fonticula_alba_gca_000388065">Fonticula alba str. ATCC 38817 (GCA_000388065.2)</option><option value="Fragilariopsis_cylindrus_ccmp1102_gca_001750085">Fragilariopsis cylindrus CCMP1102 (GCA_001750085.1)</option><option value="Giardia_intestinalis_assemblage_b_gca_001543975">Giardia intestinalis assemblage B str. BAH15c1 (GCA_001543975.1)</option><option value="Giardia_intestinalis_atcc_50581_gca_000182405">Giardia intestinalis ATCC 50581 str. GS/M H7 (GCA_000182405.1)</option><option value="Giardia_intestinalis_gca_000498715">Giardia intestinalis str. DH (GCA_000498715.1)</option><option value="Giardia_intestinalis_gca_000498735">Giardia intestinalis str. GS (GCA_000498735.1)</option><option value="Giardia_lamblia">Giardia lamblia</option><option value="Giardia_lamblia_p15_gca_000182665">Giardia lamblia P15 (GCA_000182665.1)</option><option value="Gregarina_niphandrodes_gca_000223845">Gregarina niphandrodes (GCA_000223845.4)</option><option value="Guillardia_theta">Guillardia theta CCMP2712</option><option value="Hammondia_hammondi_gca_000258005">Hammondia hammondi str. H.H.34 (GCA_000258005.2)</option><option value="Hondaea_fermentalgiana_gca_002897355">Hondaea fermentalgiana (GCA_002897355.1)</option><option value="Hyaloperonospora_arabidopsidis">Hyaloperonospora arabidopsidis</option><option value="Ichthyophthirius_multifiliis_gca_000220395">Ichthyophthirius multifiliis str. G5 (GCA_000220395.1)</option><option value="Kipferlia_bialata_gca_003568945">Kipferlia bialata (GCA_003568945.1)</option><option value="Leishmania_donovani_gca_000227135">Leishmania donovani str. BPK282A1 (GCA_000227135.2)</option><option value="Leishmania_infantum_gca_900500625">Leishmania infantum (GCA_900500625.1)</option><option value="Leishmania_major">Leishmania major</option><option value="Leishmania_panamensis_gca_000755165">Leishmania panamensis str. MHOM/PA/94/PSC-1 (GCA_000755165.1)</option><option value="Leptomonas_pyrrhocoris_gca_001293395">Leptomonas pyrrhocoris str. H10 (GCA_001293395.1)</option><option value="Leptomonas_seymouri_gca_001299535">Leptomonas seymouri str. ATCC 30220 (GCA_001299535.1)</option><option value="Monosiga_brevicollis_mx1_gca_000002865">Monosiga brevicollis MX1 (GCA_000002865.1)</option><option value="Naegleria_gruberi_gca_000004985">Naegleria gruberi str. NEG-M (GCA_000004985.1)</option><option value="Nannochloropsis_gaditana_ccmp526_gca_000240725">Nannochloropsis gaditana CCMP526 (GCA_000240725.1)</option><option value="Nannochloropsis_gaditana_gca_000569095">Nannochloropsis gaditana str. B-31 (GCA_000569095.1)</option><option value="Nothophytophthora_sp_chile5_gca_001712635">Nothophytophthora sp. Chile5 (GCA_001712635.2)</option><option value="Oxytricha_trifallax_gca_000295675_gca_000295675">Oxytricha trifallax str. JRB310 (GCA_000295675.1)</option><option value="Oxytricha_trifallax_gca_000711775">Oxytricha trifallax str. JRB310 (GCA_000711775.1)</option><option value="Paramecium_tetraurelia">Paramecium tetraurelia</option><option value="Perkinsela_sp_ccap_1560_4_gca_001235845">Perkinsela sp. CCAP 1560/4 (GCA_001235845.1)</option><option value="Perkinsus_marinus_atcc_50983_gca_000006405">Perkinsus marinus ATCC 50983 str. PmCV4CB5 2B3 D4 (GCA_000006405.1)</option><option value="Peronospora_effusa_gca_003704535">Peronospora effusa (GCA_003704535.1)</option><option value="Peronospora_effusa_gca_003843895">Peronospora effusa (GCA_003843895.1)</option><option value="Phaeodactylum_tricornutum">Phaeodactylum tricornutum</option><option value="Phytomonas_sp_isolate_em1_gca_000582765">Phytomonas sp. isolate EM1 (GCA_000582765.1)</option><option value="Phytomonas_sp_isolate_hart1_gca_000982615">Phytomonas sp. isolate Hart1 (GCA_000982615.1)</option><option value="Phytophthora_cactorum_gca_003287315">Phytophthora cactorum str. 10300 (GCA_003287315.1)</option><option value="Phytophthora_infestans">Phytophthora infestans</option><option value="Phytophthora_kernoviae">Phytophthora kernoviae</option><option value="Phytophthora_kernoviae_gca_001707905">Phytophthora kernoviae (GCA_001707905.2)</option><option value="Phytophthora_kernoviae_gca_001712645">Phytophthora kernoviae (GCA_001712645.2)</option><option value="Phytophthora_kernoviae_gca_001712705">Phytophthora kernoviae (GCA_001712705.2)</option><option value="Phytophthora_kernoviae_gca_001712715">Phytophthora kernoviae (GCA_001712715.2)</option><option value="Phytophthora_lateralis">Phytophthora lateralis</option><option value="Phytophthora_megakarya_gca_002215365">Phytophthora megakarya str. zdho120 (GCA_002215365.1)</option><option value="Phytophthora_nicotianae_gca_001482985">Phytophthora nicotianae (GCA_001482985.1)</option><option value="Phytophthora_nicotianae_gca_001483015">Phytophthora nicotianae (GCA_001483015.1)</option><option value="Phytophthora_palmivora_var_palmivora_gca_002911725">Phytophthora palmivora var. palmivora str. sbr112.9 (GCA_002911725.1)</option><option value="Phytophthora_parasitica">Phytophthora parasitica</option><option value="Phytophthora_parasitica_cj01a1_gca_000365545">Phytophthora parasitica CJ01A1 (GCA_000365545.1)</option><option value="Phytophthora_parasitica_inra_310_gca_000247585">Phytophthora parasitica INRA-310 (GCA_000247585.2)</option><option value="Phytophthora_parasitica_p10297_gca_000367145">Phytophthora parasitica P10297 (GCA_000367145.1)</option><option value="Phytophthora_parasitica_p1976_gca_000365525">Phytophthora parasitica P1976 (GCA_000365525.1)</option><option value="Phytophthora_parasitica_gca_000509505">Phytophthora parasitica str. CHvinca01 (GCA_000509505.1)</option><option value="Phytophthora_parasitica_gca_000509465">Phytophthora parasitica str. CJ02B3 (GCA_000509465.1)</option><option value="Phytophthora_parasitica_gca_000509485">Phytophthora parasitica str. CJ05E6 (GCA_000509485.1)</option><option value="Phytophthora_parasitica_gca_000509525">Phytophthora parasitica str. IAC_01/95 (GCA_000509525.1)</option><option value="Phytophthora_ramorum">Phytophthora ramorum</option><option value="Phytophthora_sojae">Phytophthora sojae</option><option value="Planoprotostelium_fungivorum_gca_003024175">Planoprotostelium fungivorum str. Jena (GCA_003024175.1)</option><option value="Plasmodiophora_brassicae_gca_001049375">Plasmodiophora brassicae (GCA_001049375.1)</option><option value="Plasmodium_berghei">Plasmodium berghei</option><option value="Plasmodium_berghei_gca_900044335">Plasmodium berghei (GCA_900044335.1)</option><option value="Plasmodium_berghei_gca_900088445">Plasmodium berghei (GCA_900088445.1)</option><option value="Plasmodium_berghei_gca_900095585">Plasmodium berghei (GCA_900095585.1)</option><option value="Plasmodium_berghei_gca_900095635">Plasmodium berghei (GCA_900095635.1)</option><option value="Plasmodium_chabaudi">Plasmodium chabaudi</option><option value="Plasmodium_chabaudi_adami_gca_900095565">Plasmodium chabaudi adami (GCA_900095565.1)</option><option value="Plasmodium_chabaudi_chabaudi_gca_900095605">Plasmodium chabaudi chabaudi (GCA_900095605.1)</option><option value="Plasmodium_coatneyi_gca_001680005">Plasmodium coatneyi (GCA_001680005.1)</option><option value="Plasmodium_cynomolgi_strain_b_gca_000321355">Plasmodium cynomolgi strain B (GCA_000321355.1)</option><option value="Plasmodium_falciparum">Plasmodium falciparum 3D7</option><option value="Plasmodium_falciparum_7g8_gca_000150435">Plasmodium falciparum 7G8 (GCA_000150435.3)</option><option value="Plasmodium_falciparum_camp_malaysia_gca_000521115">Plasmodium falciparum CAMP/Malaysia (GCA_000521115.1)</option><option value="Plasmodium_falciparum_dd2_gca_000149795">Plasmodium falciparum Dd2 (GCA_000149795.1)</option><option value="Plasmodium_falciparum_fch_4_gca_000521155">Plasmodium falciparum FCH/4 (GCA_000521155.1)</option><option value="Plasmodium_falciparum_hb3_gca_000149665">Plasmodium falciparum HB3 (GCA_000149665.2)</option><option value="Plasmodium_falciparum_igh_cr14_gca_000186055">Plasmodium falciparum IGH-CR14 (GCA_000186055.2)</option><option value="Plasmodium_falciparum_malips096_e11_gca_000521035">Plasmodium falciparum MaliPS096_E11 (GCA_000521035.1)</option><option value="Plasmodium_falciparum_nf135_5_c10_gca_000521075">Plasmodium falciparum NF135/5.C10 (GCA_000521075.1)</option><option value="Plasmodium_falciparum_nf54_gca_000401695">Plasmodium falciparum NF54 (GCA_000401695.2)</option><option value="Plasmodium_falciparum_nf54_gca_002831795">Plasmodium falciparum NF54 (GCA_002831795.1)</option><option value="Plasmodium_falciparum_palo_alto_uganda_gca_000521095">Plasmodium falciparum Palo Alto/Uganda (GCA_000521095.1)</option><option value="Plasmodium_falciparum_raj116_gca_000186025">Plasmodium falciparum RAJ116 (GCA_000186025.2)</option><option value="Plasmodium_falciparum_santa_lucia_gca_000150455">Plasmodium falciparum Santa Lucia (GCA_000150455.3)</option><option value="Plasmodium_falciparum_tanzania_2000708__gca_000521055">Plasmodium falciparum Tanzania (2000708) (GCA_000521055.1)</option><option value="Plasmodium_falciparum_ugt5_1_gca_000401715">Plasmodium falciparum UGT5.1 (GCA_000401715.2)</option><option value="Plasmodium_falciparum_vietnam_oak_knoll_fvo__gca_000521015">Plasmodium falciparum Vietnam Oak-Knoll (FVO) (GCA_000521015.1)</option><option value="Plasmodium_fragile_gca_000956335">Plasmodium fragile str. multiple (GCA_000956335.1)</option><option value="Plasmodium_gaboni_gca_001602025">Plasmodium gaboni (GCA_001602025.1)</option><option value="Plasmodium_gallinaceum_gca_900005855">Plasmodium gallinaceum (GCA_900005855.1)</option><option value="Plasmodium_gonderi_gca_002157705">Plasmodium gonderi (GCA_002157705.1)</option><option value="Plasmodium_inui_san_antonio_1_gca_000524495">Plasmodium inui San Antonio 1 (GCA_000524495.1)</option><option value="Plasmodium_knowlesi">Plasmodium knowlesi</option><option value="Plasmodium_knowlesi_gca_002140095">Plasmodium knowlesi str. Malayan Strain Pk1 (A+) (GCA_002140095.1)</option><option value="Plasmodium_knowlesi_strain_h_gca_900004885">Plasmodium knowlesi strain H (GCA_900004885.2)</option><option value="Plasmodium_malariae_gca_900088575">Plasmodium malariae (GCA_900088575.1)</option><option value="Plasmodium_malariae_gca_900090045">Plasmodium malariae (GCA_900090045.1)</option><option value="Plasmodium_ovale_gca_900090025">Plasmodium ovale (GCA_900090025.2)</option><option value="Plasmodium_ovale_curtisi_gca_900088555">Plasmodium ovale curtisi (GCA_900088555.1)</option><option value="Plasmodium_ovale_curtisi_gca_900088565">Plasmodium ovale curtisi (GCA_900088565.1)</option><option value="Plasmodium_ovale_wallikeri_gca_900088485">Plasmodium ovale wallikeri (GCA_900088485.1)</option><option value="Plasmodium_ovale_wallikeri_gca_900088545">Plasmodium ovale wallikeri (GCA_900088545.1)</option><option value="Plasmodium_reichenowi_gca_001601855">Plasmodium reichenowi (GCA_001601855.1)</option><option value="Plasmodium_reichenowi_gca_900097025">Plasmodium reichenowi (GCA_900097025.1)</option><option value="Plasmodium_relictum_gca_900005765">Plasmodium relictum (GCA_900005765.1)</option><option value="Plasmodium_sp_drc_itaito_gca_900240055">Plasmodium sp. DRC-Itaito (GCA_900240055.1)</option><option value="Plasmodium_sp_drc_itaito_gca_900257145">Plasmodium sp. DRC-Itaito (GCA_900257145.1)</option><option value="Plasmodium_sp_gorilla_clade_g2_gca_900097015">Plasmodium sp. gorilla clade G2 (GCA_900097015.1)</option><option value="Plasmodium_vinckei_petteri_gca_000524515">Plasmodium vinckei petteri str. CR (GCA_000524515.1)</option><option value="Plasmodium_vinckei_vinckei_gca_000709005">Plasmodium vinckei vinckei (GCA_000709005.1)</option><option value="Plasmodium_vivax">Plasmodium vivax</option><option value="Plasmodium_vivax_gca_900093555">Plasmodium vivax (GCA_900093555.1)</option><option value="Plasmodium_vivax_brazil_i_gca_000320645">Plasmodium vivax Brazil I (GCA_000320645.2)</option><option value="Plasmodium_vivax_india_vii_gca_000320625">Plasmodium vivax India VII (GCA_000320625.2)</option><option value="Plasmodium_vivax_mauritania_i_gca_000320665">Plasmodium vivax Mauritania I (GCA_000320665.2)</option><option value="Plasmodium_vivax_north_korean_gca_000320685">Plasmodium vivax North Korean (GCA_000320685.2)</option><option value="Plasmodium_yoelii_17x_gca_000505035">Plasmodium yoelii 17X (GCA_000505035.1)</option><option value="Plasmodium_yoelii_gca_900002385">Plasmodium yoelii str. 17X (GCA_900002385.1)</option><option value="Plasmodium_yoelii_gca_900002395">Plasmodium yoelii str. YM (GCA_900002395.1)</option><option value="Plasmodium_yoelii_yoelii_gca_000003085">Plasmodium yoelii yoelii str. 17XNL (GCA_000003085.2)</option><option value="Plasmopara_halstedii_gca_900000015">Plasmopara halstedii (GCA_900000015.1)</option><option value="Pseudonitzschia_multistriata">Pseudo-nitzschia multistriata</option><option value="Pseudocohnilembus_persalinus_gca_001447515">Pseudocohnilembus persalinus (GCA_001447515.1)</option><option value="Pythium_aphanidermatum">Pythium aphanidermatum</option><option value="Pythium_arrhenomanes">Pythium arrhenomanes</option><option value="Pythium_irregulare">Pythium irregulare</option><option value="Pythium_iwayamai">Pythium iwayamai</option><option value="Pythium_ultimum">Pythium ultimum</option><option value="Pythium_vexans">Pythium vexans</option><option value="Reticulomyxa_filosa_gca_000512085">Reticulomyxa filosa (GCA_000512085.1)</option><option value="Salpingoeca_rosetta_gca_000188695">Salpingoeca rosetta str. ATCC 50818 (GCA_000188695.1)</option><option value="Saprolegnia_diclina_vs20_gca_000281045">Saprolegnia diclina VS20 (GCA_000281045.1)</option><option value="Saprolegnia_parasitica_cbs_223_65_gca_000151545">Saprolegnia parasitica CBS 223.65 (GCA_000151545.2)</option><option value="Sphaeroforma_arctica_jp610_gca_001186125">Sphaeroforma arctica JP610 (GCA_001186125.1)</option><option value="Spironucleus_salmonicida_gca_000497125">Spironucleus salmonicida (GCA_000497125.1)</option><option value="Stentor_coeruleus_gca_001970955">Stentor coeruleus (GCA_001970955.1)</option><option value="Strigomonas_culicis_gca_000442495">Strigomonas culicis (GCA_000442495.1)</option><option value="Stylonychia_lemnae_gca_000751175">Stylonychia lemnae str. 130c (GCA_000751175.1)</option><option value="Symbiodinium_microadriaticum_gca_001939145">Symbiodinium microadriaticum str. CCMP2467 (GCA_001939145.1)</option><option value="Tetrahymena_thermophila">Tetrahymena thermophila</option><option value="Thalassiosira_oceanica_gca_000296195">Thalassiosira oceanica str. CCMP1005 (GCA_000296195.2)</option><option value="Thalassiosira_pseudonana">Thalassiosira pseudonana</option><option value="Thecamonas_trahens_atcc_50062_gca_000142905">Thecamonas trahens ATCC 50062 (GCA_000142905.1)</option><option value="Theileria_equi_strain_wa_gca_000342415">Theileria equi strain WA (GCA_000342415.1)</option><option value="Theileria_orientalis_gca_003072545">Theileria orientalis str. Fish Creek (GCA_003072545.1)</option><option value="Theileria_orientalis_gca_003072535">Theileria orientalis str. Goon Nure (GCA_003072535.1)</option><option value="Theileria_orientalis_gca_003072525">Theileria orientalis str. Robertson (GCA_003072525.1)</option><option value="Theileria_orientalis_strain_shintoku_gca_000740895">Theileria orientalis strain Shintoku (GCA_000740895.1)</option><option value="Theileria_parva_gca_000165365">Theileria parva str. Muguga (GCA_000165365.1)</option><option value="Thraustotheca_clavata_gca_002081575">Thraustotheca clavata str. ATCC 34112 (GCA_002081575.1)</option><option value="Tieghemostelium_lacteum_gca_001606155">Tieghemostelium lacteum str. TK (GCA_001606155.1)</option><option value="Toxoplasma_gondii_ari_gca_000250965">Toxoplasma gondii ARI (GCA_000250965.2)</option><option value="Toxoplasma_gondii_gca_000256705">Toxoplasma gondii CAST (GCA_000256705.2)</option><option value="Toxoplasma_gondii_coug_gca_000338675">Toxoplasma gondii COUG (GCA_000338675.2)</option><option value="Toxoplasma_gondii_fou_gca_000224905">Toxoplasma gondii FOU (GCA_000224905.2)</option><option value="Toxoplasma_gondii_gab2_2007_gal_dom2_gca_000325525">Toxoplasma gondii GAB2-2007-GAL-DOM2 (GCA_000325525.2)</option><option value="Toxoplasma_gondii_gt1_gca_000149715">Toxoplasma gondii GT1 (GCA_000149715.2)</option><option value="Toxoplasma_gondii_mas_gca_000224865">Toxoplasma gondii MAS (GCA_000224865.2)</option><option value="Toxoplasma_gondii">Toxoplasma gondii ME49</option><option value="Toxoplasma_gondii_p89_gca_000224885">Toxoplasma gondii p89 (GCA_000224885.2)</option><option value="Toxoplasma_gondii_rub_gca_000224805">Toxoplasma gondii RUB (GCA_000224805.2)</option><option value="Toxoplasma_gondii_tgcatbr9_gca_000224825">Toxoplasma gondii TgCATBr9 (GCA_000224825.2)</option><option value="Toxoplasma_gondii_tgcatprc2_gca_000256725">Toxoplasma gondii TgCatPRC2 (GCA_000256725.2)</option><option value="Toxoplasma_gondii_vand_gca_000224845">Toxoplasma gondii VAND (GCA_000224845.2)</option><option value="Toxoplasma_gondii_veg_gca_000150015">Toxoplasma gondii VEG (GCA_000150015.2)</option><option value="Tritrichomonas_foetus_gca_001839685">Tritrichomonas foetus str. K (GCA_001839685.1)</option><option value="Trypanosoma_brucei">Trypanosoma brucei</option><option value="Trypanosoma_brucei_equiperdum_gca_003543875">Trypanosoma brucei equiperdum str. IVM-t1 (GCA_003543875.1)</option><option value="Trypanosoma_conorhini_gca_003719485">Trypanosoma conorhini (GCA_003719485.1)</option><option value="Trypanosoma_cruzi_gca_003719155">Trypanosoma cruzi (GCA_003719155.1)</option><option value="Trypanosoma_cruzi_gca_003719455">Trypanosoma cruzi (GCA_003719455.1)</option><option value="Trypanosoma_cruzi_dm28c_gca_000496795">Trypanosoma cruzi Dm28c (GCA_000496795.1)</option><option value="Trypanosoma_cruzi_marinkellei_gca_000300495">Trypanosoma cruzi marinkellei (GCA_000300495.1)</option><option value="Trypanosoma_cruzi_gca_000209065">Trypanosoma cruzi str. CL Brener (GCA_000209065.1)</option><option value="Trypanosoma_cruzi_gca_003177105">Trypanosoma cruzi str. Dm28c (GCA_003177105.1)</option><option value="Trypanosoma_cruzi_gca_003177095">Trypanosoma cruzi str. TCC (GCA_003177095.1)</option><option value="Trypanosoma_equiperdum_gca_001457755">Trypanosoma equiperdum (GCA_001457755.2)</option><option value="Trypanosoma_rangeli_gca_003719475">Trypanosoma rangeli (GCA_003719475.1)</option><option value="Trypanosoma_rangeli_sc58_gca_000492115">Trypanosoma rangeli SC58 (GCA_000492115.1)</option><option value="Trypanosoma_theileri_gca_002087225">Trypanosoma theileri (GCA_002087225.1)</option></select><label for="q"> for</label></div></div><div class="form-field ff-multi"><div class="ff-inline ff-right"><input size="50" value=" " type="text" id="q" class="query inactive input ftext optional _string" name="q" /><input value="Go" class="fbutton" type="submit" /></div><div class="ff-notes"><p class="search-example">e.g. <a class="nowrap" href="/Multi/Psychic?q=PFC0120w">PFC0120w</a> or <a class="nowrap" href="/Multi/Psychic?q=cyto*">cyto*</a></p></div></div></fieldset></form></div> </div> <div class="plain-box"> <div class="js_panel"> <input type="hidden" class="panel_type" value="SpeciesList" /> <div class="column_wrapper"><div class="static_all_species column-two"><h3>All genomes</h3> <ul class="space-above"> <li><a href="/species.html">View full list of all Ensembl Protists species</a></li> <li class="customise-species-list"><a class="_list_edit modal_link" href="Account/Login?db=core">Edit your favourites</a></li> </ul> </div><div class="fave-genomes column-two"><h3>Favourite genomes</h3><div class="species-list _species_fav_container"> <div class="species-box-outer"> <div class="species-box"> <a href="/Plasmodium_falciparum/Info/Index"><img src="/i/species/Plasmodium_falciparum.png" alt="Plasmodium falciparum 3D7" title="Browse Plasmodium falciparum 3D7" class="badge-48"/></a> <a href="/Plasmodium_falciparum/Info/Index" class="species-name">Plasmodium falciparum 3D7</a> <div class="assembly">ASM276v2</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Dictyostelium_discoideum/Info/Index"><img src="/i/species/Dictyostelium_discoideum.png" alt="Dictyostelium discoideum AX4" title="Browse Dictyostelium discoideum AX4" class="badge-48"/></a> <a href="/Dictyostelium_discoideum/Info/Index" class="species-name">Dictyostelium discoideum</a> <div class="assembly">dicty_2.7</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Phytophthora_infestans/Info/Index"><img src="/i/species/Phytophthora_infestans.png" alt="Phytophthora infestans T30-4" title="Browse Phytophthora infestans T30-4" class="badge-48"/></a> <a href="/Phytophthora_infestans/Info/Index" class="species-name">Phytophthora infestans</a> <div class="assembly">ASM14294v1</div> </div> </div> <div class="species-box-outer"> <div class="species-box"> <a href="/Leishmania_major/Info/Index"><img src="/i/species/Leishmania_major.png" alt="Leishmania major" title="Browse Leishmania major" class="badge-48"/></a> <a href="/Leishmania_major/Info/Index" class="species-name">Leishmania major</a> <div class="assembly">ASM272v2</div> </div> </div></div><div class="_species_sort_container reorder_species clear hidden"><p>For easy access to commonly used genomes, drag from the bottom list to the top one</p> <p><strong>Favourites</strong></p> <ul class="_favourites"></ul> <p><strong>Other available species</strong></p> <ul class="_species"></ul> <p><a href="#Done" class="button _list_done">Done</a> <a href="#Reset" class="button _list_reset">Restore default list</a></p></div><input name="fav_template" class="js_param" value=" <div class="species-box-outer"> <div class="species-box"> <a href="{{species.homepage}}"><img src="{{species.img}}" alt="{{species.name}}" title="Browse {{species.name}}" class="badge-48"/></a> <a href="{{species.homepage}}" class="species-name">{{species.common}}</a> <div class="assembly">{{species.assembly}}</div> </div> {{species.extra}} </div>" type="hidden" /><input name="list_template" type="hidden" value="<li id="species-{{species.key}}">{{species.common}} (<em>{{species.name}}</em>)</li>" class="js_param" /><input name="species_list" value="[{"favourite":1,"group":"Alveolata","has_alt":0,"extra":"","strainspage":0,"name":"Plasmodium falciparum 3D7","key":"Plasmodium_falciparum","img":"/i/species/Plasmodium_falciparum.png","homepage":"/Plasmodium_falciparum/Info/Index","common":"Plasmodium falciparum 3D7","assembly":"ASM276v2","assembly_v":"ASM276v2"},{"has_alt":0,"group":"Amoebozoa","strainspage":0,"extra":"","favourite":1,"assembly":"dicty_2.7","common":"Dictyostelium discoideum","homepage":"/Dictyostelium_discoideum/Info/Index","img":"/i/species/Dictyostelium_discoideum.png","assembly_v":"dicty_2.7","key":"Dictyostelium_discoideum","name":"Dictyostelium discoideum AX4"},{"assembly_v":"ASM14294v1","img":"/i/species/Phytophthora_infestans.png","homepage":"/Phytophthora_infestans/Info/Index","common":"Phytophthora infestans","assembly":"ASM14294v1","name":"Phytophthora infestans T30-4","key":"Phytophthora_infestans","extra":"","strainspage":0,"group":"Stramenopiles","has_alt":0,"favourite":1},{"favourite":1,"has_alt":0,"group":"Kinetoplastida","strainspage":0,"extra":"","name":"Leishmania major","key":"Leishmania_major","img":"/i/species/Leishmania_major.png","assembly":"ASM272v2","homepage":"/Leishmania_major/Info/Index","common":"Leishmania major","assembly_v":"ASM272v2"},{"favourite":0,"has_alt":0,"group":"Amoebozoa","extra":"","strainspage":0,"name":"Acanthamoeba castellanii str. Neff","key":"Acanthamoeba_castellanii_str_neff_gca_000313135","img":"/i/species/Acanthamoeba_castellanii_str_neff_gca_000313135.png","assembly":"Acastellanii.strNEFF_v1","homepage":"/Acanthamoeba_castellanii_str_neff_gca_000313135/Info/Index","common":"Acanthamoeba castellanii str. Neff (GCA_000313135.1)","assembly_v":"EHA_CA_v1"},{"assembly_v":"ASM31002v1","homepage":"/Achlya_hypogyna_gca_002081595/Info/Index","common":"Achlya hypogyna str. ATCC 48635 (GCA_002081595.1)","assembly":"ACH_lane_v1","img":"/i/species/Achlya_hypogyna_gca_002081595.png","key":"Achlya_hypogyna_gca_002081595","name":"Achlya hypogyna str. ATCC 48635","strainspage":0,"extra":"","group":"Stramenopiles","has_alt":0,"favourite":0},{"key":"Albugo_laibachii","name":"Albugo laibachii","assembly_v":"ENA1","homepage":"/Albugo_laibachii/Info/Index","common":"Albugo laibachii","assembly":"ENA1","img":"/i/species/Albugo_laibachii.png","favourite":0,"extra":"","strainspage":0,"group":"Stramenopiles","has_alt":0},{"favourite":0,"strainspage":0,"extra":"","has_alt":0,"group":"Kinetoplastida","name":"Angomonas deanei","key":"Angomonas_deanei_gca_000442575","assembly_v":"ASM22713v2","img":"/i/species/Angomonas_deanei_gca_000442575.png","assembly":"Angomonas_deanei_Genome","homepage":"/Angomonas_deanei_gca_000442575/Info/Index","common":"Angomonas deanei (GCA_000442575.2)"},{"name":"Aphanomyces astaci","key":"Aphanomyces_astaci_gca_002197585","assembly_v":"ASM31002v1","img":"/i/species/Aphanomyces_astaci_gca_002197585.png","homepage":"/Aphanomyces_astaci_gca_002197585/Info/Index","common":"Aphanomyces astaci (GCA_002197585.2)","assembly":"ASM219758v2","favourite":0,"strainspage":0,"extra":"","group":"Stramenopiles","has_alt":0},{"favourite":0,"strainspage":0,"extra":"","has_alt":0,"group":"Stramenopiles","name":"Aphanomyces astaci","key":"Aphanomyces_astaci_gca_003546545","assembly_v":"ASM31002v1","img":"/i/species/Aphanomyces_astaci_gca_003546545.png","assembly":"astaci_Si","homepage":"/Aphanomyces_astaci_gca_003546545/Info/Index","common":"Aphanomyces astaci (GCA_003546545.1)"},{"key":"Aphanomyces_astaci_gca_003546565","name":"Aphanomyces astaci","common":"Aphanomyces astaci (GCA_003546565.1)","homepage":"/Aphanomyces_astaci_gca_003546565/Info/Index","assembly":"astaci_KV","img":"/i/species/Aphanomyces_astaci_gca_003546565.png","assembly_v":"ASM31002v1","favourite":0,"group":"Stramenopiles","has_alt":0,"extra":"","strainspage":0},{"favourite":0,"group":"Stramenopiles","has_alt":0,"extra":"","strainspage":0,"key":"Aphanomyces_astaci_gca_003546585","name":"Aphanomyces astaci","homepage":"/Aphanomyces_astaci_gca_003546585/Info/Index","common":"Aphanomyces astaci (GCA_003546585.1)","assembly":"astaci_D2","img":"/i/species/Aphanomyces_astaci_gca_003546585.png","assembly_v":"ASM31002v1"},{"img":"/i/species/Aphanomyces_astaci_gca_003546605.png","assembly":"astaci_YX","homepage":"/Aphanomyces_astaci_gca_003546605/Info/Index","common":"Aphanomyces astaci (GCA_003546605.1)","assembly_v":"ASM31002v1","name":"Aphanomyces astaci","key":"Aphanomyces_astaci_gca_003546605","has_alt":0,"group":"Stramenopiles","strainspage":0,"extra":"","favourite":0},{"favourite":0,"strainspage":0,"extra":"","has_alt":0,"group":"Stramenopiles","key":"Aphanomyces_astaci_gca_003546625","name":"Aphanomyces astaci","assembly_v":"ASM31002v1","assembly":"astaci_SA","homepage":"/Aphanomyces_astaci_gca_003546625/Info/Index","common":"Aphanomyces astaci (GCA_003546625.1)","img":"/i/species/Aphanomyces_astaci_gca_003546625.png"},{"assembly_v":"ASM31002v1","img":"/i/species/Aphanomyces_astaci_gca_003546765.png","common":"Aphanomyces astaci (GCA_003546765.1)","homepage":"/Aphanomyces_astaci_gca_003546765/Info/Index","assembly":"astaci_SV","name":"Aphanomyces astaci","key":"Aphanomyces_astaci_gca_003546765","extra":"","strainspage":0,"group":"Stramenopiles","has_alt":0,"favourite":0},{"assembly_v":"ASM31002v1","img":"/i/species/Aphanomyces_astaci_gca_003546785.png","homepage":"/Aphanomyces_astaci_gca_003546785/Info/Index","common":"Aphanomyces astaci (GCA_003546785.1)","assembly":"astaci_457","name":"Aphanomyces astaci","key":"Aphanomyces_astaci_gca_003546785","extra":"","strainspage":0,"group":"Stramenopiles","has_alt":0,"favourite":0},{"strainspage":0,"extra":"","group":"Stramenopiles","has_alt":0,"favourite":0,"assembly_v":"ASM31002v1","homepage":"/Aphanomyces_astaci_gca_003546805/Info/Index","common":"Aphanomyces astaci (GCA_003546805.1)","assembly":"astaci_197901","img":"/i/species/Aphanomyces_astaci_gca_003546805.png","key":"Aphanomyces_astaci_gca_003546805","name":"Aphanomyces astaci"},{"strainspage":0,"extra":"","group":"Stramenopiles","has_alt":0,"favourite":0,"assembly_v":"ASM31002v1","homepage":"/Aphanomyces_astaci_gca_003546825/Info/Index","common":"Aphanomyces astaci (GCA_003546825.1)","assembly":"Da","img":"/i/species/Aphanomyces_astaci_gca_003546825.png","key":"Aphanomyces_astaci_gca_003546825","name":"Aphanomyces astaci"},{"assembly_v":"ASM31002v1","assembly":"astaci_KB13","homepage":"/Aphanomyces_astaci_gca_003666305/Info/Index","common":"Aphanomyces astaci (GCA_003666305.1)","img":"/i/species/Aphanomyces_astaci_gca_003666305.png","key":"Aphanomyces_astaci_gca_003666305","name":"Aphanomyces astaci","extra":"","strainspage":0,"has_alt":0,"group":"Stramenopiles","favourite":0},{"favourite":0,"group":"Stramenopiles","has_alt":0,"strainspage":0,"extra":"","key":"Aphanomyces_astaci_gca_000520075","name":"Aphanomyces astaci str. 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For full documentation including examples from a wide range of languages, visit <a href="http://rest.ensemblgenomes.org">http://rest.ensemblgenomes.org</a> </p></div> <ul><li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">New genomes</span></span> <ul><li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif"><em>Pseudo-nitzschia multistriata, </em>a marine planktonic diatom capable of producing the neurotoxin domoic acid, a molecule that can contaminate seafood and cause amnesic shellfish poisoning.</span></span></li></ul> </li> <li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated genomes</span></span> <ul><li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif"><em>Plasmodium falciparum</em></span></span></li></ul> </li> <li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated data</span></span> <ul><li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated protein features for all species using <a href="http://www.ebi.ac.uk/interpro/search/sequence-search">InterProScan</a> with version 75 of <a href="https://www.ebi.ac.uk/interpro/">InterPro</a>.</span></span></li> <li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated BioMarts for all gene and variation data.</span></span></li> <li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated protist compara database</span></span></li> <li><span style="font-size:14px"><span style="font-family:arial,helvetica,sans-serif">Updated pan-taxonomic compara database (with key protist genomes)</span></span></li></ul> </li></ul> </div> <div class="plain-box"><h2 dir="ltr">Archive sites</h2> <p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">Archive of release 40 of EnsemblProtists: <a href="http://eg40-protists.ensembl.org">eg40-protists.ensembl.org</a> (July 2018)</span></span></p> <p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">Archive of release 37 of EnsemblProtists: <a href="http://eg37-protists.ensembl.org">eg37-protists.ensembl.org</a> (October 2017)</span></span></p></div> <div class="plain-box"><h2 dir="ltr">Ensembl Protists</h2> <p dir="ltr"><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif"><span style="background-color:transparent">Ensembl Protists is a browser for </span><span style="background-color:transparent">protist genomes. A majority of these are taken from the databases of the </span><a href="http://www.insdc.org/"><span style="background-color:transparent">International Nucleotide Sequence Database Collaboration</span></a><span style="background-color:transparent"> (the European Nucleotide Archive at the EBI, GenBank at the NCBI, and the DNA Database of Japan); in some cases, the annotation has been taken directly from the websites of the data generators.</span></span></span><strong> </strong><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif"><span style="background-color:transparent">Data can be visualised through the Ensembl genome browser and accessed programmatically via our Perl and RESTful APIs. Data is also accessible through public MySQL databases and our </span><span style="background-color:transparent">FTP site</span><span style="background-color:transparent"> containing full data dumps in FASTA, EMBL, GTF, GFF3, JSON and RDF formats.</span></span></span></p> <p>Ensembl Genomes is developed by <a href="http://www.ebi.ac.uk">EMBL-EBI</a> and is powered by the <a href="http://www.ensembl.org">Ensembl</a> software system for the analysis and visualisation of genomic data. 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