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Crash Course: Python Scripting for Molecular Docking | iqb.rutgers.edu

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#banner --> <div id="banner"> </div><!-- EOF: #banner --> <!-- #content --> <div id="content"> <!-- #content-inside --> <div id="content-inside" class="container_12 clearfix"> <div id="main" class="grid_12"> <h1>Crash Course: Python Scripting for Molecular Docking</h1> <div class="region region-content"> <div id="block-system-main" class="block block-system"> <div class="content"> <div id="node-284" class="node node-page" about="/node/284" typeof="foaf:Document"> <span property="dc:title" content="Crash Course: Python Scripting for Molecular Docking" class="rdf-meta element-hidden"></span> <div class="content clearfix"> <div class="field field-name-body field-type-text-with-summary field-label-hidden"><div class="field-items"><div class="field-item even" property="content:encoded"><p><img title="Python Crash Course Header" src="https://iqb.rutgers.edu/sites/iqb.rutgers.edu/files/python3-header.png" alt="Python Crash Course Header" width="1000" height="384" /></p> <h2>Thursday, July 18, 2024 from 1-5pm Eastern, 10am-2pm Pacific</h2> <h3><strong><a href="https://pdb101.rcsb.org/train/training-events/python3">Watch the recording of the course on PDB-101 and access the related materials</a><br /></strong></h3> <p>In this workshop, we will use Python scripting to explore ligand binding to enzymes. In the process, we will use a number of python libraries and these notebooks will be customizable for individual research and teaching purposes.</p> <p>At the completion of this workshop, users will be able to:</p> <ul> <li>Perform advanced searches of the RCSB Protein Data Bank with the rcsbsearchapi package</li> <li>Modify chemical structures with the rdkit library</li> <li>Dock ligands with enzymes, yielding visual and quantitative energy results</li> </ul> <p>The workshop is intended for:</p> <ul> <li>Undergraduate students in any STEM discipline</li> <li>Graduate students and postdoctoral researchers in life sciences and data collection</li> <li>Faculty members who want to incorporate Python scripting into their teaching or research</li> <li>Professionals involved in collecting and analyzing data, particularly big data</li> </ul> <p>A virtual office hour may be held on Monday July 15 (3pm-5pm Eastern) to help users with Python/Jupyter notebooks before the Crash Course. Please indicate on the registration form if interested.</p> <p>Questions? Please contact <a href="mailto:info@rcsb.org">info@rcsb.org</a>.</p> <p>Participants may also be interested in recordings of <a href="https://pdb101.rcsb.org/train/training-events">past training events</a>, including <em>Python Scripting for Biochemistry &amp; Molecular Biology</em> <a href="https://pdb101.rcsb.org/train/training-events/python">Part 1</a> and <a href="https://pdb101.rcsb.org/train/training-events/python2">Part 2</a>.</p> <p><a href="https://iqb.rutgers.edu/sites/iqb.rutgers.edu/files/crashcourses/footer.png"><span style="color: #000000;"><img src="https://iqb.rutgers.edu/sites/iqb.rutgers.edu/files/crashcourses/footer.png" alt="" width="814" height="314" /></span></a></p> </div></div></div> </div> <div class="clearfix"> <div class="links"></div> </div> </div></div> </div> </div> </div><!-- EOF: #main --> </div><!-- EOF: #content-inside --> </div><!-- EOF: #content --> <!-- #footer --> <div id="footer"> <!-- #footer-inside --> <div id="footer-inside" class="container_12 clearfix"> <div class="region region-footer-first"> <div id="block-block-2" class="block block-block"> <div class="content"> <p style="text-align: center;"><a href="https://iqb.rutgers.edu/contact_iqb"><span style="text-decoration: underline;">Contact Us</span> </a>• <a style="text-decoration: underline;" href="/Directions">Directions</a> • <span style="text-decoration: underline;"><a href="user">Login</a></span></p> </div> </div> </div> <div class="footer-area grid_4"> <!-- <div class="region region-footer-first"> <div class="region region-footer-first"> <div id="block-block-2" class="block block-block"> <div class="content"> <p style="text-align: center;"><a href="https://iqb.rutgers.edu/contact_iqb"><span style="text-decoration: underline;">Contact Us</span> </a>• <a style="text-decoration: underline;" href="/Directions">Directions</a> • <span style="text-decoration: underline;"><a href="user">Login</a></span></p> </div> </div> </div> </div> --> </div><!-- EOF: .footer-area --> <div class="footer-area grid_4"> </div><!-- EOF: .footer-area --> <div class="footer-area grid_4"> </div><!-- EOF: .footer-area --> </div><!-- EOF: #footer-inside --> </div><!-- EOF: #footer --> <!-- #footer-bottom --> <div id="footer-bottom"> <!-- #footer-bottom-inside --> <div id="footer-bottom-inside" class="container_12 clearfix"> <div class="region region-footer"> <div id="block-block-3" class="block block-block"> <div class="content"> <p style="text-align: center;">Institute for Quantitative Biomedicine • Rutgers, The State University of New Jersey • +1-848-445-0103</p> </div> </div> </div> <!-- #footer-bottom-left --> <div id="footer-bottom-left" class="grid_8"> <!-- <div class="region region-footer"> <div class="region region-footer"> <div id="block-block-3" class="block block-block"> <div class="content"> <p style="text-align: center;">Institute for Quantitative Biomedicine • Rutgers, The State University of New Jersey • +1-848-445-0103</p> </div> </div> </div> </div> --> </div> <!-- #footer-bottom-right --> <div id="footer-bottom-right" class="grid_4"> </div><!-- EOF: #footer-bottom-right --> </div><!-- EOF: #footer-bottom-inside --> </div><!-- EOF: #footer --> <script type="text/javascript"> <!--//--><![CDATA[//><!-- jQuery(document).ready(function($) { $(window).load(function() { $("#slideshow img").show(); $("#slideshow").fadeIn("slow"); $("#slider-controls-wrapper").fadeIn("slow"); $("#slideshow").cycle({ fx: "fade", speed: "slow", timeout: "5000", random: 0, nowrap: 0, pause: 1, pager: "#slider-navigation", pagerAnchorBuilder: function(idx, slide) { return "#slider-navigation li:eq(" + (idx) + ") a"; }, slideResize: true, containerResize: false, height: "auto", fit: 1, before: function(){ $(this).parent().find(".slider-item.current").removeClass("current"); }, after: onAfter }); }); function onAfter(curr, next, opts, fwd) { var $ht = $(this).height(); $(this).parent().height($ht); $(this).addClass("current"); } $(window).load(function() { var $ht = $(".slider-item.current").height(); $("#slideshow").height($ht); }); $(window).resize(function() { var $ht = $(".slider-item.current").height(); $("#slideshow").height($ht); }); }); //--><!]]> </script> </body> </html>

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