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About: FASTQ format
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It was originally developed at the Wellcome Trust Sanger Institute to bundle a FASTA formatted sequence and its quality data, but has recently become the de facto standard for storing the output of high-throughput sequencing instruments such as the Illumina Genome Analyzer." /> <meta property="og:site_name" content="DBpedia" /> <!-- /OpenGraph--> </head> <body about="http://dbpedia.org/resource/FASTQ_format"> <!-- navbar --> <nav class="navbar navbar-expand-md navbar-light bg-light fixed-top align-items-center"> <div class="container-xl"> <a class="navbar-brand" href="http://wiki.dbpedia.org/about" title="About DBpedia" style="color: #2c5078"> <img class="img-fluid" src="/statics/images/dbpedia_logo_land_120.png" alt="About DBpedia" /> </a> <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#dbp-navbar" aria-controls="dbp-navbar" aria-expanded="false" aria-label="Toggle navigation"> <span class="navbar-toggler-icon"></span> </button> <div 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</div> </div> </div> <div class="row pt-2"> <div class="col-xs-9 col-sm-10"> <p class="lead">FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter and quality score are each encoded with a single ASCII character for brevity. It was originally developed at the Wellcome Trust Sanger Institute to bundle a FASTA formatted sequence and its quality data, but has recently become the de facto standard for storing the output of high-throughput sequencing instruments such as the Illumina Genome Analyzer.</p> </div> <div class="col-xs-3 col-sm-2"> <a href="#" class="thumbnail"> <img src="http://commons.wikimedia.org/wiki/Special:FilePath/Probability_metrics.svg?width=300" alt="thumbnail" class="img-fluid" /> </a> </div> </div> </div> </section> <!-- page-header --> <!-- property-table --> <section> <div class="container-xl"> <div class="row"> <div class="table-responsive"> <table class="table table-hover table-sm table-light"> <thead> <tr> <th class="col-xs-3 ">Property</th> <th class="col-xs-9 px-3">Value</th> </tr> </thead> <tbody> <tr class="odd"><td class="col-2"><a class="uri" href="http://dbpedia.org/ontology/abstract"><small>dbo:</small>abstract</a> </td><td class="col-10 text-break"><ul> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="ca" >El format FASTQ és un format de text pla utilitzat per emmagatzemar seqüències biològiques (normalment de nucleòtids) juntament amb llurs puntuacions de qualitat. Tant la lletra de la seqüència com la puntuació de qualitat estan codificades amb un únic caràcter ASCII per brevetat. Va ser dissenyat originalment al per tal d'empaquetar les seqüències FASTA juntament amb les dades de qualitat. Actualment podríem considerar que és l'estàndard de facto per tal d'emmagatzemar dades d'instruments de seqüenciació massiva.</span><small> (ca)</small></span></li> <li><span class="literal"><span property="dbo:abstract" lang="en" >FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter and quality score are each encoded with a single ASCII character for brevity. It was originally developed at the Wellcome Trust Sanger Institute to bundle a FASTA formatted sequence and its quality data, but has recently become the de facto standard for storing the output of high-throughput sequencing instruments such as the Illumina Genome Analyzer.</span><small> (en)</small></span></li> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="fr" >Le format FASTQ est un format de fichier texte permettant de stocker à la fois des séquences biologiques (uniquement des séquences nucléiques) et les scores de qualité associés. La séquence et le score sont chacune codées avec un seul caractère ASCII. Ce format a été initialement développé par le Wellcome Trust Sanger Institute afin de lier un fichier de séquence au format FASTA aux données de qualité correspondantes mais est récemment devenu le standard de facto pour le stockage des sorties de séquenceurs à haut débit.</span><small> (fr)</small></span></li> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="in" >Format FASTQ merupakan format berbasis teks untuk meyimpan sekuen data biologi (nukleotida) dan nilai kualitasnya. Hal ini berbeda dengan format yang hanya menuliskan sekuen data biologi. Nilai kualitas dari sekuen ditulis dalam deret ASCII. Format ini pertama kali dikembangkan oleh untuk menyatukan FASTA dan nilai kualitasnya, tetapi saat ini telah digunakan oleh untuk menyimpan hasil sekuensing dari .</span><small> (in)</small></span></li> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="ja" >FASTQ形式はテキストベースの形式で、DNAなどの塩基配列とそのクオリティスコアを1つのファイルに一緒に保存する際に用いられる。塩基配列とクオリティスコアは各1文字のASCII文字で表され、これにより塩基とクオリティの対応関係が分かりやすくなっている。この形式はWellcome Trust Sanger Instituteで開発されたもので、FASTA形式のデータにクオリティ情報を追加するためのものであった。しかし今日ではIllumina Genome Analyzerのような次世代シーケンサー等から出力された塩基配列のデータを保存する際のフォーマットとしてデファクトスタンダードとなっている。</span><small> (ja)</small></span></li> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="ru" >Формат FASTQ — текстовый формат данных, используемый для представления биологической последовательности (обычно нуклеотидной последовательности) и показателей качества каждого элемента последовательности. Элементы последовательности и их показатели качества кодируются для краткости одиночными символами ASCII. Применяется в биоинформатике. Первоначально формат был разработан в Wellcome Trust Sanger Institute для объединения отформатированной последовательности FASTA и данных о качестве элементов, но затем он стал стандартом де-факто для хранения результатов высокоэффективных инструментов секвенирования, в частности для анализаторов генома корпорации Illumina. Формат FASTQ не стандартизирован и различные аппаратно-программные системы обработки информации, использующие его для входных/выходных данных могут иметь некоторые различия (например разные системы кодирования показателя качества элементов последовательности).</span><small> (ru)</small></span></li> <li style="display:none;"><span class="literal"><span property="dbo:abstract" lang="zh" >FASTQ格式是一种保存生物序列（通常为核酸序列）及其测序质量得分信息的文本格式。序列与质量得分皆由单个ASCII字符表示。 该格式最初由开发，旨在将FASTA格式序列及其质量数据整合在一起。而目前，FASTQ格式已经成为了保存高通量测序结果的事实标准。</span><small> (zh)</small></span></li> </ul></td></tr><tr class="even"><td class="col-2"><a class="uri" href="http://dbpedia.org/ontology/thumbnail"><small>dbo:</small>thumbnail</a> </td><td class="col-10 text-break"><ul> <li><span class="literal"><a class="uri" rel="dbo:thumbnail" resource="http://commons.wikimedia.org/wiki/Special:FilePath/Probability_metrics.svg?width=300" 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style="display:none;"><span class="literal"><span property="rdfs:comment" lang="ca" >El format FASTQ és un format de text pla utilitzat per emmagatzemar seqüències biològiques (normalment de nucleòtids) juntament amb llurs puntuacions de qualitat. Tant la lletra de la seqüència com la puntuació de qualitat estan codificades amb un únic caràcter ASCII per brevetat. Va ser dissenyat originalment al per tal d'empaquetar les seqüències FASTA juntament amb les dades de qualitat. Actualment podríem considerar que és l'estàndard de facto per tal d'emmagatzemar dades d'instruments de seqüenciació massiva.</span><small> (ca)</small></span></li> <li><span class="literal"><span property="rdfs:comment" lang="en" >FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter and quality score are each encoded with a single ASCII character for brevity. It was originally developed at the Wellcome Trust Sanger Institute to bundle a FASTA formatted sequence and its quality data, but has recently become the de facto standard for storing the output of high-throughput sequencing instruments such as the Illumina Genome Analyzer.</span><small> (en)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:comment" lang="fr" >Le format FASTQ est un format de fichier texte permettant de stocker à la fois des séquences biologiques (uniquement des séquences nucléiques) et les scores de qualité associés. La séquence et le score sont chacune codées avec un seul caractère ASCII. Ce format a été initialement développé par le Wellcome Trust Sanger Institute afin de lier un fichier de séquence au format FASTA aux données de qualité correspondantes mais est récemment devenu le standard de facto pour le stockage des sorties de séquenceurs à haut débit.</span><small> (fr)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:comment" lang="in" >Format FASTQ merupakan format berbasis teks untuk meyimpan sekuen data biologi (nukleotida) dan nilai kualitasnya. Hal ini berbeda dengan format yang hanya menuliskan sekuen data biologi. Nilai kualitas dari sekuen ditulis dalam deret ASCII. Format ini pertama kali dikembangkan oleh untuk menyatukan FASTA dan nilai kualitasnya, tetapi saat ini telah digunakan oleh untuk menyimpan hasil sekuensing dari .</span><small> (in)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:comment" lang="ja" >FASTQ形式はテキストベースの形式で、DNAなどの塩基配列とそのクオリティスコアを1つのファイルに一緒に保存する際に用いられる。塩基配列とクオリティスコアは各1文字のASCII文字で表され、これにより塩基とクオリティの対応関係が分かりやすくなっている。この形式はWellcome Trust Sanger Instituteで開発されたもので、FASTA形式のデータにクオリティ情報を追加するためのものであった。しかし今日ではIllumina Genome Analyzerのような次世代シーケンサー等から出力された塩基配列のデータを保存する際のフォーマットとしてデファクトスタンダードとなっている。</span><small> (ja)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:comment" lang="zh" >FASTQ格式是一种保存生物序列（通常为核酸序列）及其测序质量得分信息的文本格式。序列与质量得分皆由单个ASCII字符表示。 该格式最初由开发，旨在将FASTA格式序列及其质量数据整合在一起。而目前，FASTQ格式已经成为了保存高通量测序结果的事实标准。</span><small> (zh)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:comment" lang="ru" >Формат FASTQ — текстовый формат данных, используемый для представления биологической последовательности (обычно нуклеотидной последовательности) и показателей качества каждого элемента последовательности. Элементы последовательности и их показатели качества кодируются для краткости одиночными символами ASCII. Применяется в биоинформатике.</span><small> (ru)</small></span></li> </ul></td></tr><tr class="odd"><td class="col-2"><a class="uri" href="http://www.w3.org/2000/01/rdf-schema#label"><small>rdfs:</small>label</a> </td><td class="col-10 text-break"><ul> <li style="display:none;"><span class="literal"><span property="rdfs:label" lang="ca" >Format FASTQ</span><small> (ca)</small></span></li> <li><span class="literal"><span property="rdfs:label" lang="en" >FASTQ format</span><small> (en)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:label" lang="fr" >FASTQ</span><small> (fr)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:label" lang="in" >Format FASTQ</span><small> (in)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:label" lang="ja" >Fastq</span><small> (ja)</small></span></li> <li style="display:none;"><span class="literal"><span property="rdfs:label" lang="ru" 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