Developing ImageJ2 in NetBeans

<!DOCTYPE html> <html> <head> <title>Developing ImageJ2 in NetBeans</title> <meta charset="utf-8" /> <meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=3" /> <meta content="ImageJ Wiki" property="og:site_name"> <meta content="Developing ImageJ2 in NetBeans" property="og:title"> <meta content="article" property="og:type"> <meta content="The ImageJ wiki is a community-edited knowledge base on topics relating to ImageJ, a public domain program for processing and analyzing scientific images, and its ecosystem of derivatives and variants, including ImageJ2, Fiji, and others." property="og:description"> <meta content="https://imagej.github.io/develop/netbeans" property="og:url"> <meta content="https://imagej.github.io/media/icons/imagej2.png" property="og:image"> <link rel="apple-touch-icon" sizes="180x180" href="/apple-touch-icon.png"> <link rel="icon" type="image/png" sizes="32x32" href="/favicon-32x32.png"> <link rel="icon" type="image/png" sizes="16x16" 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class="sidebar dock">   <div id="toc" class="toc menu dockable"> <div class="drag-handle"></div> <h3>Page contents</h3> <ul data-toc="#content" data-toc-headings="h1,h2,h3,h4,h5,h6"></ul> </div> </section>  <div class="container"> <header class="major special"> <a class="project-icon shadowed-box" href="/software/imagej2"><span class="tooltip"><img src="/media/icons/imagej2.png"><span class="tooltiptext" style="top: 80%; left: 25%; width: 20em">This page describes content relating to the ImageJ2 platform. Click the logo for details.</span></span></a> <h1>Developing ImageJ2 in NetBeans</h1> <span class="project-counterweight"> </span> </header> </div>   <section id="page" class="main style1"> <div class="container"> <div class="box alt"></div> <div id="content" class="page-content"> <div class="notice" style="font-size: 2; background: #ebf2f8; border-left: 10px solid #67a1fe"><div class="notice-icon"><img src="/media/icons/info.svg" width="32"></div><div class="notice-content"><p>The content of this page has not been vetted since shifting away from MediaWiki. If you’d like to help, check out the <a href="/events/wiki-grand-opening/how-to-help">how to help guide</a>!</p> </div> </div> <div class="notice" style="font-size: 2; background: #ffcccb; border-left: 10px solid #f57900"><div class="notice-icon"><img src="/media/icons/warning.png" /></div><div class="notice-content"><p>This section is out of date, potentially misleading or invalid. Be careful with any instructions here. When in doubt, <a href="/discuss">ask for help from the community</a>.</p> </div> </div> <p>This article explains how to install and configure NetBeans for use with <a href="/software/imagej2">ImageJ2</a> development. Directions correspond to NetBeans 7.1.2, which added integrated Git support, and may need adjustment for other versions.</p> <h2 id="install-and-configure-netbeans">Install and configure NetBeans</h2> <h3 id="setting-up-netbeans-on-windows">Setting up NetBeans on Windows</h3> <h4 id="install-java-development-kit">Install Java Development Kit</h4> <p>Download and install <a href="https://www.azul.com/downloads/?package=jdk">OpenJDK</a>.</p> <h4 id="install-netbeans">Install NetBeans</h4> <p>Download and install NetBeans from the <a href="http://netbeans.org/downloads/">NetBeans website</a>. Any bundle that includes Java SE should be fine.</p> <h3 id="setting-up-netbeans-on-macos">Setting up NetBeans on macOS</h3> <h4 id="install-netbeans-1">Install NetBeans</h4> <p>Download and install NetBeans from the <a href="http://netbeans.org/downloads/">NetBeans website</a>. Any bundle that includes Java SE should be fine.</p> <h3 id="setting-up-netbeans-on-linux">Setting up NetBeans on Linux</h3> <h4 id="install-java-development-kit-1">Install Java Development Kit</h4> <p>Install Java using the package manager—e.g., for Ubuntu 10.04:</p> <div class="language-shell highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="nb">sudo </span>add-apt-repository <span class="s2">"deb http://archive.canonical.com/ lucid partner"</span> <span class="nb">sudo </span>aptitude update <span class="nb">sudo </span>aptitude <span class="nb">install </span>sun-java6-jdk sun-java6-plugin <span class="nb">sudo </span>update-java-alternatives <span class="nt">-s</span> sun-java6-sun </code></pre></div></div> <h4 id="install-netbeans-2">Install NetBeans</h4> <p>Install NetBeans using the package manager—e.g., on Ubuntu:</p> <div class="language-shell highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="nb">sudo </span>aptitude <span class="nb">install </span>netbeans </code></pre></div></div> <h2 id="import-the-imagej2-source">Import the ImageJ2 source</h2> <ol> <li>Choose <span class="bc"><span>Team</span> › <span>Git</span> › <span>Clone…</span></span> from the NetBeans menu</li> <li>For the Repository URL, enter: <a href="git://github.com/imagej/imagej2"><code class="language-plaintext highlighter-rouge">git://github.com/imagej/imagej2</code></a></li> <li>Click Next, check the <code class="language-plaintext highlighter-rouge">master\*</code> branch, then Next again, then Finish</li> <li>When prompted, click Open Project…</li> <li>Select the “ImageJ” project in the tree then click Open</li> <li>Right-click the “ImageJ” project and choose Build</li> </ol> <p>You may receive a warning about Maven when building the project. It is not required, but if you wish to eliminate it, you can install Maven from the <a href="http://maven.apache.org/download.html">Maven website</a>.</p> <h2 id="launch-the-program">Launch the program</h2> <ol> <li>Double-click the “ImageJ” project to open it</li> <li>Right-click the “ImageJ” project and choose “Run”</li> <li>On the Main Class dialog, choose <code class="language-plaintext highlighter-rouge">net.imagej.Main</code></li> </ol> <p>To expand the projects you can also right click on the top-level “ImageJ” and choose “Open Required Projects” (and “Close Required Projects” to close). During development you must select “Open Required Projects” before you can successfully do “Find Usages” in the “Open Projects” scope.</p> <h2 id="see-also">See also</h2> <p>To develop the <a href="/software/imagej">original ImageJ</a>, see these resources:</p> <ul> <li><a href="https://www.youtube.com/watch?v=Ac-6gJ2eRb0">Developing ImageJ 1.x plugins with NetBeans</a> screencast</li> <li><a href="https://github.com/imagej/example-legacy-plugin/">example-legacy-plugin</a> project template</li> <li><a href="/develop/ij1-plugins">Developing Plugins for ImageJ 1.x</a> tutorial</li> </ul> </div> </div> </section>  <section id="footer"> <ul class="icons"> <li><a href="https://forum.image.sc/tag/imagej" class="icon alt"><img src="/media/icons/image-sc.png" width="24" style="vertical-align: middle; margin-top: -10px"><span class="label">Forum</span></a></li> <li><a href="https://twitter.com/hashtag/ImageJ" class="icon brands alt fa-twitter"><span class="label">Twitter</span></a></li> <li><a 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href="/platforms/windows">Windows</a></li> <li><a href="/platforms/macos">MacOS</a></li> <li><a href="/platforms/linux">Linux</a></li> <li><a href="/platforms/pi">Raspberry Pi</a></li> <li><a href="/platforms/android">Android</a></li> </ul></details></li>  <li><details><summary><a href="/formats">File Formats</a></summary><ul> <li><a href="/formats/bio-formats">Bio-Formats</a></li> <li><a href="/formats/video">Video formats</a></li> <li><a href="/formats/quicktime">QuickTime</a></li> <li><a href="/formats/tiff">TIFF</a></li> <li><a href="/formats/pdf">PDF</a></li> <li><a href="/formats/dicom">DICOM</a></li> <li><a href="/formats/lsm">Zeiss LSM</a></li> <li><a href="/formats/olympus">Olympus VSI</a></li> <li><a href="/formats/lurawave">Opera Flex</a></li> <li><a href="/formats/fib-sem">FIB-SEM</a></li> </ul></details></li>  </ul></details></li>  <li><details><summary><a href="/imaging">Scientific Imaging</a></summary><ul> <li><a href="/imaging/principles">Principles of Scientific Imaging</a></li> <li><a href="/imaging/annotating-images">Annotating Images</a></li> <li><a href="/imaging/colocalization-analysis">Colocalization</a></li> <li><a href="/imaging/color-image-processing">Color Image Processing</a></li> <li><a href="/imaging/deconvolution">Deconvolution</a></li> <li><a href="/imaging/image-intensity-processing">Image Intensity Processing</a></li> <li><a href="/imaging/particle-analysis">Particle Analysis</a></li> <li><a href="/imaging/registration">Registration</a></li> <li><a href="/imaging/segmentation">Segmentation</a></li> <li><a href="/imaging/stack-slice-manipulations">Stack-slice Manipulations</a></li> <li><a href="/imaging/t-functions">T-functions</a></li> <li><a href="/imaging/tracking">Tracking</a></li> <li><a href="/imaging/visualization">Visualization</a></li> <li><a href="/imaging/z-functions">Z-functions</a></li> </ul></details></li>  </ul></details></li>  <li><details open><summary><a href="/plugins">Extend</a></summary><ul> <li><a href="/list-of-extensions">List of Extensions</a></li> <li><details><summary><a href="/update-sites">Update Sites</a></summary><ul> <li><a href="/list-of-update-sites">List of Update Sites</a></li> <li><a href="/update-sites/following">Following an Update Site</a></li> <li><a href="/update-sites/setup">Creating an Update Site</a></li> <li><a href="/update-sites/tos">Terms of Service</a></li> <li><a href="/update-sites/automatic-uploads">Automatic Upload</a></li> <li><a href="/update-sites/core-uploads">Uploading to Core Sites</a></li> <li><a href="/update-sites/faq">Update Sites FAQ</a></li> <li><a href="/update-sites/stats">Statistics</a></li> </ul></details></li>  <li><details><summary><a href="/scripting">Scripting</a></summary><ul> <li><a href="/scripting/basics">Scripting Basics</a></li> <li><a href="/scripting/script-editor">Script Editor</a></li> <li><a href="/scripting/parameters">Parameters</a></li> <li><a href="/scripting/user-input">User Input</a></li> <li><a href="/scripting/auto-imports">Auto Import</a></li> <li><a href="/scripting/templates">Templates</a></li> <li><a href="/scripting/batch">Batch Processing</a></li> <li><a href="/scripting/headless">Running Headlessly</a></li> <li><a href="/scripting/comparisons">Scripting Comparisons</a></li> <li><a href="/scripting/toolbox">Toolbox</a></li> <li><details><summary>Languages</summary><ul> <li><a href="/scripting/beanshell">BeanShell Scripting</a></li> <li><a href="/scripting/groovy">Groovy Scripting</a></li> <li><a href="/scripting/macro">ImageJ Macro</a></li> <li><a href="/scripting/javascript">JavaScript</a></li> <li><a href="/scripting/clojure">Lisp (Clojure)</a></li> <li><a href="/scripting/matlab">MATLAB</a></li> <li><a href="/scripting/jython">Python (Jython)</a></li> <li><a href="/scripting/python">Python (native)</a></li> <li><a href="/scripting/renjin">R (Renjin)</a></li> <li><a href="/scripting/jruby">Ruby (JRuby)</a></li> <li><a href="/scripting/scala">Scala Scripting</a></li> </ul></details></li>  </ul></details></li>  <li><details open><summary><a href="/develop">Development</a></summary><ul> <li><a href="/develop/philosophy">Philosophy</a></li> <li><a href="/develop/architecture">Architecture</a></li> <li><a href="/develop/source">Source code</a></li> <li><a href="/develop/project-management">Project management</a></li> <li><a href="/develop/coding-style">Coding style</a></li> <li><a href="/develop/javadoc">Using Javadoc</a></li> <li><a href="/develop/debugging">Debugging</a></li> <li><a href="/develop/wish-list">Wish list</a></li> <li><details open><summary>Tools</summary><ul> <li><a href="/develop/github">GitHub</a></li> <li><a href="/develop/maven">Maven</a></li> <li><a href="/develop/ci">CI/CD</a></li> <li><a href="/develop/dotfiles">Dotfiles</a></li> <li><details open><summary><a href="/develop/ides">IDEs</a></summary><ul> <li><a href="/develop/eclipse">Eclipse</a></li> <li><a class="current-page">NetBeans</a></li> <li><a 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href="/contribute">Contribute</a></summary><ul> <li><a href="/contribute/citing">Citing</a></li> <li><a href="/people">Contributors</a></li> <li><a href="/orgs">Organizations</a></li> <li><a href="/contribute/governance">Governance</a></li> <li><a href="/contribute/funding">Funding</a></li> <li><a href="/contribute/fiji">Contributing to Fiji</a></li> <li><details><summary><a href="/licensing">Licensing</a></summary><ul> <li><details><summary><a href="/licensing/open-source">Open Source</a></summary><ul> <li><a href="/licensing/apache">Apache</a></li> <li><a href="/licensing/bsd">BSD</a></li> <li><a href="/licensing/epl">EPL</a></li> <li><a href="/licensing/gpl">GPL</a></li> <li><a href="/licensing/lgpl">LGPL</a></li> <li><a href="/licensing/mit">MIT</a></li> <li><a href="/licensing/public-domain">Public domain</a></li> <li><a href="/licensing/big">BIG</a></li> </ul></details></li>  <li><a href="/licensing/closed-source">Proprietary</a></li> </ul></details></li>  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