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<!DOCTYPE html> <html lang="en"> <head> <script src="/static/js/20-prettify.js"></script> <script src="/static/js/30-jquery-1.11.1.min.js"></script> <script src="/static/js/highlight/highlight.pack.js"></script> <meta charset="utf-8"/> <meta name="viewport" content="width=device-width, initial-scale=1.0"/> <title>Ensembl Rest API - Ensembl REST API Endpoints</title> <link href='/_asset/8f35166051019d4c43cb29867ae6f94a.css' rel='stylesheet'/> <style> body { padding-top: 60px; /* 60px to make the container go all the way to the bottom of the topbar */ } </style> <link href="/static/css/premin/bootstrap-responsive.min.css" rel="stylesheet">   </head> <body data-spy="scroll" data-target=".bs-docs-sidebar" onload="prettyPrint()"> <div class="container"> <div class="navbar navbar-inverse navbar-fixed-top"> <div class="navbar-inner"> <div class="container"> <a class="brand" href="http://www.ensembl.org"><img class="brand" src="/static/img/e-ensembl.png" alt="Service logo"/></a> <ul class="nav"> <li class="active"><a href="/">Endpoints</a></li> <li><a href="http://github.com/Ensembl/ensembl-rest/wiki">User Guide</a></li> <li><a href="http://github.com/Ensembl/ensembl-rest/wiki/Change-log">Change Log</a></li> <li><a href="http://www.ensembl.org/info/about/index.html">About the Ensembl Project</a></li> <li><a href="http://www.ensembl.org/info/about/contact/">Contact Ensembl</a></li> <li><a target="_blank" href="https://www.ebi.ac.uk/data-protection/ensembl/privacy-notice">Privacy Notice</a></li> </ul> </div> </div> </div> <br> <span class="message"></span> <span class="error"></span> <h1 id="title">Ensembl REST API Endpoints</h1> <table class="table table-striped"> <thead> <tr><td><h3 id="Archive"> Archive</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/archive_id_get">GET archive/id/:id </a> </td><td> Uses the given identifier to return its latest version</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/archive_id_post">POST archive/id </a> </td><td> Retrieve the latest version for a set of identifiers</td></tr> </tbody> <thead> <tr><td><h3 id="Comparative_Genomics"> Comparative Genomics</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/cafe_tree">GET cafe/genetree/id/:id </a> </td><td> Retrieves a cafe tree of the gene tree using the gene tree stable identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/cafe_tree_member_symbol">GET cafe/genetree/member/symbol/:species/:symbol </a> </td><td> Retrieves the cafe tree of the gene tree that contains the gene identified by a symbol</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/cafe_tree_species_member_id">GET cafe/genetree/member/id/:species/:id </a> </td><td> Retrieves the cafe tree of the gene tree that contains the gene / transcript / translation stable identifier in the given species</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/genetree">GET genetree/id/:id </a> </td><td> Retrieves a gene tree for a gene tree stable identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/genetree_member_symbol">GET genetree/member/symbol/:species/:symbol </a> </td><td> Retrieves the gene tree that contains the gene identified by a symbol</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/genetree_species_member_id">GET genetree/member/id/:species/:id </a> </td><td> Retrieves the gene tree that contains the gene / transcript / translation stable identifier in the given species</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/genomic_alignment_region">GET alignment/region/:species/:region </a> </td><td> Retrieves genomic alignments as separate blocks based on a region and species</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/homology_species_gene_id">GET homology/id/:species/:id </a> </td><td> Retrieves homology information (orthologs) by species and Ensembl gene id</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/homology_symbol">GET homology/symbol/:species/:symbol </a> </td><td> Retrieves homology information (orthologs) by symbol</td></tr> </tbody> <thead> <tr><td><h3 id="Cross_References"> Cross References</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/xref_external">GET xrefs/symbol/:species/:symbol </a> </td><td> Looks up an external symbol and returns all Ensembl objects linked to it. This can be a display name for a gene/transcript/translation, a synonym or an externally linked reference. If a gene's transcript is linked to the supplied symbol the service will return both gene and transcript (it supports transient links).</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/xref_id">GET xrefs/id/:id </a> </td><td> Perform lookups of Ensembl Identifiers and retrieve their external references in other databases</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/xref_name">GET xrefs/name/:species/:name </a> </td><td> Performs a lookup based upon the primary accession or display label of an external reference and returning the information we hold about the entry</td></tr> </tbody> <thead> <tr><td><h3 id="Information"> Information</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/analysis">GET info/analysis/:species </a> </td><td> List the names of analyses involved in generating Ensembl data.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_info">GET info/assembly/:species </a> </td><td> List the currently available assemblies for a species, along with toplevel sequences, chromosomes and cytogenetic bands.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_stats">GET info/assembly/:species/:region_name </a> </td><td> Returns information about the specified toplevel sequence region for the given species.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/biotypes">GET info/biotypes/:species </a> </td><td> List the functional classifications of gene models that Ensembl associates with a particular species. Useful for restricting the type of genes/transcripts retrieved by other endpoints.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/biotypes_groups">GET info/biotypes/groups/:group/:object_type </a> </td><td> Without argument the list of available biotype groups is returned. With :group argument provided, list the properties of biotypes within that group. Object type (gene or transcript) can be provided for filtering.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/biotypes_name">GET info/biotypes/name/:name/:object_type </a> </td><td> List the properties of biotypes with a given name. Object type (gene or transcript) can be provided for filtering.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/compara_methods">GET info/compara/methods </a> </td><td> List all compara analyses available (an analysis defines the type of comparative data).</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/compara_species_sets">GET info/compara/species_sets/:method </a> </td><td> List all collections of species analysed with the specified compara method.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/comparas">GET info/comparas </a> </td><td> Lists all available comparative genomics databases and their data release. DEPRECATED: use info/genomes/division instead.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/data">GET info/data </a> </td><td> Shows the data releases available on this REST server. May return more than one release (unfrequent non-standard Ensembl configuration).</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/eg_version">GET info/eg_version </a> </td><td> Returns the Ensembl Genomes version of the databases backing this service</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/external_dbs">GET info/external_dbs/:species </a> </td><td> Lists all available external sources for a species.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_divisions">GET info/divisions </a> </td><td> Get list of all Ensembl divisions for which information is available</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_genome">GET info/genomes/:genome_name </a> </td><td> Find information about a given genome</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_genomes_accession">GET info/genomes/accession/:accession </a> </td><td> Find information about genomes containing a specified INSDC accession</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_genomes_assembly">GET info/genomes/assembly/:assembly_id </a> </td><td> Find information about a genome with a specified assembly</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_genomes_division">GET info/genomes/division/:division_name </a> </td><td> Find information about all genomes in a given division. May be large for Ensembl Bacteria.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/info_genomes_taxonomy">GET info/genomes/taxonomy/:taxon_name </a> </td><td> Find information about all genomes beneath a given node of the taxonomy</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ping">GET info/ping </a> </td><td> Checks if the service is alive.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/rest">GET info/rest </a> </td><td> Shows the current version of the Ensembl REST API.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/software">GET info/software </a> </td><td> Shows the current version of the Ensembl API used by the REST server.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/species">GET info/species </a> </td><td> Lists all available species, their aliases, available adaptor groups and data release.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation">GET info/variation/:species </a> </td><td> List the variation sources used in Ensembl for a species.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_consequence_types">GET info/variation/consequence_types </a> </td><td> Lists all variant consequence types.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_population_name">GET info/variation/populations/:species:/:population_name </a> </td><td> List all individuals for a population from a species</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_populations">GET info/variation/populations/:species </a> </td><td> List all populations for a species</td></tr> </tbody> <thead> <tr><td><h3 id="Linkage_Disequilibrium"> Linkage Disequilibrium</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/ld_id_get">GET ld/:species/:id/:population_name </a> </td><td> Computes and returns LD values between the given variant and all other variants in a window centered around the given variant. The window size is set to 500 kb.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ld_pairwise_get">GET ld/:species/pairwise/:id1/:id2 </a> </td><td> Computes and returns LD values between the given variants.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ld_region_get">GET ld/:species/region/:region/:population_name </a> </td><td> Computes and returns LD values between all pairs of variants in the defined region.</td></tr> </tbody> <thead> <tr><td><h3 id="Lookup"> Lookup</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/lookup">GET lookup/id/:id </a> </td><td> Find the species and database for a single identifier e.g. gene, transcript, protein</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/lookup_post">POST lookup/id </a> </td><td> Find the species and database for several identifiers. IDs that are not found are returned with no data.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/symbol_lookup">GET lookup/symbol/:species/:symbol </a> </td><td> Find the species and database for a symbol in a linked external database</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/symbol_post">POST lookup/symbol/:species/:symbol </a> </td><td> Find the species and database for a set of symbols in a linked external database. Unknown symbols are omitted from the response.</td></tr> </tbody> <thead> <tr><td><h3 id="Mapping"> Mapping</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_cdna">GET map/cdna/:id/:region </a> </td><td> Convert from cDNA coordinates to genomic coordinates. Output reflects forward orientation coordinates as returned from the Ensembl API.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_cds">GET map/cds/:id/:region </a> </td><td> Convert from CDS coordinates to genomic coordinates. Output reflects forward orientation coordinates as returned from the Ensembl API.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_map">GET map/:species/:asm_one/:region/:asm_two </a> </td><td> Convert the co-ordinates of one assembly to another</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/assembly_translation">GET map/translation/:id/:region </a> </td><td> Convert from protein (translation) coordinates to genomic coordinates. Output reflects forward orientation coordinates as returned from the Ensembl API.</td></tr> </tbody> <thead> <tr><td><h3 id="Ontologies_and_Taxonomy"> Ontologies and Taxonomy</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/ontology_ancestors">GET ontology/ancestors/:id </a> </td><td> Reconstruct the entire ancestry of a term from is_a and part_of relationships</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ontology_ancestors_chart">GET ontology/ancestors/chart/:id </a> </td><td> Reconstruct the entire ancestry of a term from is_a and part_of relationships.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ontology_descendants">GET ontology/descendants/:id </a> </td><td> Find all the terms descended from a given term. By default searches are conducted within the namespace of the given identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ontology_id">GET ontology/id/:id </a> </td><td> Search for an ontological term by its namespaced identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/ontology_name">GET ontology/name/:name </a> </td><td> Search for a list of ontological terms by their name</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/taxonomy_classification">GET taxonomy/classification/:id </a> </td><td> Return the taxonomic classification of a taxon node</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/taxonomy_id">GET taxonomy/id/:id </a> </td><td> Search for a taxonomic term by its identifier or name</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/taxonomy_name">GET taxonomy/name/:name </a> </td><td> Search for a taxonomic id by a non-scientific name</td></tr> </tbody> <thead> <tr><td><h3 id="Overlap"> Overlap</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/overlap_id">GET overlap/id/:id </a> </td><td> Retrieves features (e.g. genes, transcripts, variants and more) that overlap a region defined by the given identifier.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/overlap_region">GET overlap/region/:species/:region </a> </td><td> Retrieves features (e.g. genes, transcripts, variants and more) that overlap a given region.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/overlap_translation">GET overlap/translation/:id </a> </td><td> Retrieve features related to a specific Translation as described by its stable ID (e.g. domains, variants).</td></tr> </tbody> <thead> <tr><td><h3 id="Phenotype_annotations"> Phenotype annotations</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/phenotype_accession">GET /phenotype/accession/:species/:accession </a> </td><td> Return phenotype annotations for genomic features given a phenotype ontology accession</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/phenotype_gene">GET /phenotype/gene/:species/:gene </a> </td><td> Return phenotype annotations for a given gene.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/phenotype_region">GET /phenotype/region/:species/:region </a> </td><td> Return phenotype annotations that overlap a given genomic region.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/phenotype_term">GET /phenotype/term/:species/:term </a> </td><td> Return phenotype annotations for genomic features given a phenotype ontology term</td></tr> </tbody> <thead> <tr><td><h3 id="Regulation"> Regulation</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/get_binding_matrix">GET species/:species/binding_matrix/:binding_matrix_stable_id/ </a> </td><td> Return the specified binding matrix</td></tr> </tbody> <thead> <tr><td><h3 id="Sequence"> Sequence</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/sequence_id">GET sequence/id/:id </a> </td><td> Request multiple types of sequence by stable identifier. Supports feature masking and expand options.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/sequence_id_post">POST sequence/id </a> </td><td> Request multiple types of sequence by a stable identifier list.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/sequence_region">GET sequence/region/:species/:region </a> </td><td> Returns the genomic sequence of the specified region of the given species. Supports feature masking and expand options.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/sequence_region_post">POST sequence/region/:species </a> </td><td> Request multiple types of sequence by a list of regions.</td></tr> </tbody> <thead> <tr><td><h3 id="Transcript_Haplotypes"> Transcript Haplotypes</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/transcript_haplotypes_get">GET transcript_haplotypes/:species/:id </a> </td><td> Computes observed transcript haplotype sequences based on phased genotype data</td></tr> </tbody> <thead> <tr><td><h3 id="VEP"> VEP</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_hgvs_get">GET vep/:species/hgvs/:hgvs_notation </a> </td><td> Fetch variant consequences based on a HGVS notation</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_hgvs_post">POST vep/:species/hgvs </a> </td><td> Fetch variant consequences for multiple HGVS notations</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_id_get">GET vep/:species/id/:id </a> </td><td> Fetch variant consequences based on a variant identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_id_post">POST vep/:species/id </a> </td><td> Fetch variant consequences for multiple ids</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_region_get">GET vep/:species/region/:region/:allele/ </a> </td><td> Fetch variant consequences</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/vep_region_post">POST vep/:species/region </a> </td><td> Fetch variant consequences for multiple regions</td></tr> </tbody> <thead> <tr><td><h3 id="Variation"> Variation</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/variant_recoder">GET variant_recoder/:species/:id </a> </td><td> Translate a variant identifier, HGVS notation or genomic SPDI notation to all possible variant IDs, HGVS and genomic SPDI</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variant_recoder_post">POST variant_recoder/:species </a> </td><td> Translate a list of variant identifiers, HGVS notations or genomic SPDI notations to all possible variant IDs, HGVS and genomic SPDI</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_id">GET variation/:species/:id </a> </td><td> Uses a variant identifier (e.g. rsID) to return the variation features including optional genotype, phenotype and population data</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_pmcid_get">GET variation/:species/pmcid/:pmcid </a> </td><td> Fetch variants by publication using PubMed Central reference number (PMCID)</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_pmid_get">GET variation/:species/pmid/:pmid </a> </td><td> Fetch variants by publication using PubMed reference number (PMID)</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/variation_post">POST variation/:species/ </a> </td><td> Uses a list of variant identifiers (e.g. rsID) to return the variation features including optional genotype, phenotype and population data</td></tr> </tbody> <thead> <tr><td><h3 id="Variation_GA4GH"> Variation GA4GH</h3></td><td></td></tr> <tr><th>Resource</th><th>Description</th></tr> </thead> <tbody> <tr><td><a href="http://rest.ensembl.org/documentation/info/beacon_get">GET ga4gh/beacon </a> </td><td> Return Beacon information</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/beacon_query_get">GET ga4gh/beacon/query </a> </td><td> Return the Beacon response for allele information</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/beacon_query_post">POST ga4gh/beacon/query </a> </td><td> Return the Beacon response for allele information</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/features_id">GET ga4gh/features/:id </a> </td><td> Return the GA4GH record for a specific sequence feature given its identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/features_post">POST ga4gh/features/search </a> </td><td> Return a list of sequence annotation features in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gacallSet">POST ga4gh/callsets/search </a> </td><td> Return a list of sets of genotype calls for specific samples in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gacallset_id">GET ga4gh/callsets/:id </a> </td><td> Return the GA4GH record for a specific CallSet given its identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gadataset">POST ga4gh/datasets/search </a> </td><td> Return a list of datasets in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gadataset_id">GET ga4gh/datasets/:id </a> </td><td> Return the GA4GH record for a specific dataset given its identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gafeatureset">POST ga4gh/featuresets/search </a> </td><td> Return a list of feature sets in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gafeatureset_id">GET ga4gh/featuresets/:id </a> </td><td> Return the GA4GH record for a specific featureSet given its identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gavariant_id">GET ga4gh/variants/:id </a> </td><td> Return the GA4GH record for a specific variant given its identifier.</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gavariantannotations">POST ga4gh/variantannotations/search </a> </td><td> Return variant annotation information in GA4GH format for a region on a reference sequence</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gavariants">POST ga4gh/variants/search </a> </td><td> Return variant call information in GA4GH format for a region on a reference sequence</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gavariantset">POST ga4gh/variantsets/search </a> </td><td> Return a list of variant sets in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/gavariantset_id">GET ga4gh/variantsets/:id </a> </td><td> Return the GA4GH record for a specific VariantSet given its identifier</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/references">POST ga4gh/references/search </a> </td><td> Return a list of reference sequences in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/references_id">GET ga4gh/references/:id </a> </td><td> Return data for a specific reference in GA4GH format by id</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/referenceSets">POST ga4gh/referencesets/search </a> </td><td> Return a list of reference sets in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/referenceSets_id">GET ga4gh/referencesets/:id </a> </td><td> Return data for a specific reference set in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/VariantAnnotationSet">POST ga4gh/variantannotationsets/search </a> </td><td> Return a list of annotation sets in GA4GH format</td></tr> <tr><td><a href="http://rest.ensembl.org/documentation/info/VariantAnnotationSet_id">GET ga4gh/variantannotationsets/:id </a> </td><td> Return meta data for a specific annotation set in GA4GH format</td></tr> </tbody> </table> </div> <footer class="footer"> <div class="container"> <p class="pull-right"><a href="#">Back to 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