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GitHub - ARTFL-Project/text-pair: High-performance text aligner for large collections of texts
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height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-chevron-down HeaderMenu-icon ml-1"> <path d="M12.78 5.22a.749.749 0 0 1 0 1.06l-4.25 4.25a.749.749 0 0 1-1.06 0L3.22 6.28a.749.749 0 1 1 1.06-1.06L8 8.939l3.72-3.719a.749.749 0 0 1 1.06 0Z"></path> </svg> </button> <div class="HeaderMenu-dropdown dropdown-menu rounded m-0 p-0 pt-2 pt-lg-4 position-relative position-lg-absolute left-0 left-lg-n3 pb-2 pb-lg-4 px-lg-4"> <div class="HeaderMenu-column"> <div class="border-bottom pb-3 pb-lg-0 pb-lg-3 mb-3 mb-lg-0 mb-lg-3"> <ul class="list-style-none f5" > <li> <a class="HeaderMenu-dropdown-link d-block no-underline position-relative py-2 Link--secondary d-flex flex-items-center Link--has-description" data-analytics-event="{"location":"navbar","action":"github_sponsors","context":"open_source","tag":"link","label":"github_sponsors_link_open_source_navbar"}" href="/sponsors"> <div> <div class="color-fg-default h4">GitHub Sponsors</div> 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js-details-container js-header-menu-item"> <button type="button" class="HeaderMenu-link border-0 width-full width-lg-auto px-0 px-lg-2 py-lg-2 no-wrap d-flex flex-items-center flex-justify-between js-details-target" aria-expanded="false"> Enterprise <svg opacity="0.5" aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-chevron-down HeaderMenu-icon ml-1"> <path d="M12.78 5.22a.749.749 0 0 1 0 1.06l-4.25 4.25a.749.749 0 0 1-1.06 0L3.22 6.28a.749.749 0 1 1 1.06-1.06L8 8.939l3.72-3.719a.749.749 0 0 1 1.06 0Z"></path> </svg> </button> <div class="HeaderMenu-dropdown dropdown-menu rounded m-0 p-0 pt-2 pt-lg-4 position-relative position-lg-absolute left-0 left-lg-n3 pb-2 pb-lg-4 px-lg-4"> <div class="HeaderMenu-column"> <div class="border-bottom pb-3 pb-lg-0 pb-lg-3 mb-3 mb-lg-0 mb-lg-3"> <ul class="list-style-none f5" > <li> <a class="HeaderMenu-dropdown-link d-block no-underline position-relative py-2 Link--secondary 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data-target="react-partial.embeddedData">{"props":{"initialPayload":{"allShortcutsEnabled":false,"path":"/","repo":{"id":76451964,"defaultBranch":"master","name":"text-pair","ownerLogin":"ARTFL-Project","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2016-12-14T11:04:06.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/1399357?v=4","public":true,"private":false,"isOrgOwned":true},"currentUser":null,"refInfo":{"name":"master","listCacheKey":"v0:1720536472.0","canEdit":false,"refType":"branch","currentOid":"3a42dbf51a6b302e9aed94acada763bb8aecafce"},"tree":{"items":[{"name":"api","path":"api","contentType":"directory"},{"name":"api_server","path":"api_server","contentType":"directory"},{"name":"config","path":"config","contentType":"directory"},{"name":"docs","path":"docs","contentType":"directory"},{"name":"extras","path":"extras","contentType":"directory"},{"name":"lib","path":"lib","contentType":"directory"},{"name":"web-app","path":"web-app","contentType":"directory"},{"name":".gitignore","path":".gitignore","contentType":"file"},{"name":"Dockerfile","path":"Dockerfile","contentType":"file"},{"name":"LICENSE","path":"LICENSE","contentType":"file"},{"name":"NOTICE.md","path":"NOTICE.md","contentType":"file"},{"name":"README.md","path":"README.md","contentType":"file"},{"name":"REFERENCES.md","path":"REFERENCES.md","contentType":"file"},{"name":"docker_autostart.sh","path":"docker_autostart.sh","contentType":"file"},{"name":"example.png","path":"example.png","contentType":"file"},{"name":"install.sh","path":"install.sh","contentType":"file"},{"name":"textpair","path":"textpair","contentType":"file"}],"templateDirectorySuggestionUrl":null,"readme":null,"totalCount":17,"showBranchInfobar":false},"fileTree":null,"fileTreeProcessingTime":null,"foldersToFetch":[],"treeExpanded":false,"symbolsExpanded":false,"isOverview":true,"overview":{"banners":{"shouldRecommendReadme":false,"isPersonalRepo":false,"showUseActionBanner":false,"actionSlug":null,"actionId":null,"showProtectBranchBanner":false,"publishBannersInfo":{"dismissActionNoticePath":"/settings/dismiss-notice/publish_action_from_repo","releasePath":"/ARTFL-Project/text-pair/releases/new?marketplace=true","showPublishActionBanner":false},"interactionLimitBanner":null,"showInvitationBanner":false,"inviterName":null,"actionsMigrationBannerInfo":{"releaseTags":[],"showImmutableActionsMigrationBanner":false,"initialMigrationStatus":null}},"codeButton":{"contactPath":"/contact","isEnterprise":false,"local":{"protocolInfo":{"httpAvailable":true,"sshAvailable":null,"httpUrl":"https://github.com/ARTFL-Project/text-pair.git","showCloneWarning":null,"sshUrl":null,"sshCertificatesRequired":null,"sshCertificatesAvailable":null,"ghCliUrl":"gh 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\u003ci\u003eEssais\u003c/i\u003e... Since all we do is glose over what's already been written, we may as well build a tool to detect these intertextual relationships...\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch1 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eTextPAIR (Pairwise Alignment for Intertextual Relations)\u003c/h1\u003e\u003ca id=\"user-content-textpair-pairwise-alignment-for-intertextual-relations\" class=\"anchor\" aria-label=\"Permalink: TextPAIR (Pairwise Alignment for Intertextual Relations)\" href=\"#textpair-pairwise-alignment-for-intertextual-relations\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eTextPAIR is a scalable and high-performance sequence aligner for humanities text analysis designed to identify \"similar passages\" in large collections of texts. These may include direct quotations, plagiarism and other forms of borrowings, commonplace expressions and the like. It is a complete rewrite and rethink of the \u003ca href=\"https://code.google.com/archive/p/text-pair/\" rel=\"nofollow\"\u003eoriginal implementation\u003c/a\u003e released in 2009.\u003c/p\u003e\n\u003cp dir=\"auto\"\u003eWhile TextPAIR was developed in response to the fairly specific phenomenon of similar passages across literary works, the sequence analysis techniques employed in TextPAIR were developed in widely disparate fields, such as bioinformatics and computer science, with applications ranging from genome sequencing to plagiarism detection. TextPAIR generates a set of overlapping word sequence shingles for every text in a corpus, then stores and indexes that information to be analyzed against shingles from other texts. For example, the opening declaration from Rousseau's Du Contrat Social,\u003c/p\u003e\n\u003cp dir=\"auto\"\u003e\u003ccode\u003e\"L'homme est né libre, est partout il est dans les fers. Tel se croit le maître des autres, qui ne laisse pas d'être plus esclave qu'eux,\"\u003c/code\u003e\u003c/p\u003e\n\u003cp dir=\"auto\"\u003ewould be rendered in trigram shingles (with lemmatization, accents flattened and function words removed) as:\u003c/p\u003e\n\u003cp dir=\"auto\"\u003e\u003ccode\u003ehomme_libre_partout, libre_partout_fer, partout_fer_croire, fer_croire_maitre, croire_maitre_laisser, maitre_laisser_esclave\u003c/code\u003e\u003c/p\u003e\n\u003cp dir=\"auto\"\u003eCommon shingles across texts indicate many different types of textual borrowings, from direct citations to more ambiguous and unattributed usages of a passage. Using a simple search form, the user can quickly identify similar passages shared between different texts in one database, or even across databases, such as in the example below.\u003c/p\u003e\n\u003cp dir=\"auto\"\u003e\u003ca target=\"_blank\" rel=\"noopener noreferrer\" href=\"/ARTFL-Project/text-pair/blob/master/example.png\"\u003e\u003cimg src=\"/ARTFL-Project/text-pair/raw/master/example.png\" alt=\"alt text\" style=\"max-width: 100%;\"\u003e\u003c/a\u003e\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eInstallation\u003c/h2\u003e\u003ca id=\"user-content-installation\" class=\"anchor\" aria-label=\"Permalink: Installation\" href=\"#installation\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eThe recommended install is to build your own Docker image and run TextPAIR inside a container.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch3 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eDocker container method\u003c/h3\u003e\u003ca id=\"user-content-docker-container-method\" class=\"anchor\" aria-label=\"Permalink: Docker container method\" href=\"#docker-container-method\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003eGo to the docker folder and build a docker image: \u003ccode\u003edocker build -t textpair .\u003c/code\u003e\u003c/li\u003e\n\u003cli\u003eStart a new container: \u003ccode\u003edocker run -td -p 80:80 --name textpair artfl/textpair init_textpair_db\u003c/code\u003e\nNote that you may want to customize the \u003ccode\u003erun\u003c/code\u003e command according to your needs (e.g. to mount a volume for your data)\nYou will need to copy your texts to the container, and then follow the normal procedure described below once inside the container.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cp dir=\"auto\"\u003eIf you do run into the issue where the web server does not respond, restart the web server with the following command:\n\u003ccode\u003e/var/lib/text-pair/api_server/web_server.sh \u0026amp;\u003c/code\u003e\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch3 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eManual installation\u003c/h3\u003e\u003ca id=\"user-content-manual-installation\" class=\"anchor\" aria-label=\"Permalink: Manual installation\" href=\"#manual-installation\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eIf you wish to install TextPAIR on a host machine, note that TextPair will only run on 64 bit Linux, see below.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eDependencies\u003c/h4\u003e\u003ca id=\"user-content-dependencies\" class=\"anchor\" aria-label=\"Permalink: Dependencies\" href=\"#dependencies\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003ePython 3.10 and up\u003c/li\u003e\n\u003cli\u003eNode and NPM\u003c/li\u003e\n\u003cli\u003ePostgreSQL: you will need to create a dedicated database and create a user with read/write permissions on that database. You will also need to create the pg_trgm extension on that database by running the following command in the PostgreSQL shell: \u003ccode\u003eCREATE EXTENSION pg_trgm;\u003c/code\u003e run as a superuser.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eInstall script\u003c/h4\u003e\u003ca id=\"user-content-install-script\" class=\"anchor\" aria-label=\"Permalink: Install script\" href=\"#install-script\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eSee \u003ca href=\"/ARTFL-Project/text-pair/blob/master/docs/ubuntu_installation.md\"\u003eUbuntu install instructions\u003c/a\u003e\u003c/p\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003eRun \u003ccode\u003einstall.sh\u003c/code\u003e script. This should install all needed components\u003c/li\u003e\n\u003cli\u003eMake sure you include \u003ccode\u003e/etc/text-pair/apache_wsgi.conf\u003c/code\u003e in your main Apache configuration file to enable searching\u003c/li\u003e\n\u003cli\u003eEdit \u003ccode\u003e/etc/text-pair/global_settings.ini\u003c/code\u003e to provide your PostgreSQL user, database, and password.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eQuick start\u003c/h2\u003e\u003ca id=\"user-content-quick-start\" class=\"anchor\" aria-label=\"Permalink: Quick start\" href=\"#quick-start\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eBefore running any alignment, make sure you edit your copy of \u003ccode\u003econfig.ini\u003c/code\u003e. See \u003ca href=\"#configuring-the-alignment\"\u003ebelow\u003c/a\u003e for details\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eNOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target\u003c/h4\u003e\u003ca id=\"user-content-note-source-designates-the-source-database-from-which-reuses-are-deemed-to-originate-and-target-is-the-collection-borrowing-from-source-in-practice-the-number-of-alignments-wont-vary-significantly-if-you-swap-source-and-target\" class=\"anchor\" aria-label=\"Permalink: NOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target\" href=\"#note-source-designates-the-source-database-from-which-reuses-are-deemed-to-originate-and-target-is-the-collection-borrowing-from-source-in-practice-the-number-of-alignments-wont-vary-significantly-if-you-swap-source-and-target\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eThe sequence aligner is executed via the \u003ccode\u003etextpair\u003c/code\u003e command. The basic command is:\n\u003ccode\u003etextpair --config=/path/to/config [OPTIONS] [database_name]\u003c/code\u003e\u003c/p\u003e\n\u003cp dir=\"auto\"\u003e\u003ccode\u003etextpair\u003c/code\u003e takes the following command-line arguments:\u003c/p\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003e\u003ccode\u003e--config\u003c/code\u003e: This argument is required. It defines the path to the configuration file where preprocessing, matching, and web application settings are set\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--is_philo_db\u003c/code\u003e: Define if files are from a PhiloLogic database. If set to \u003ccode\u003eTrue\u003c/code\u003e metadata will be fetched using the PhiloLogic metadata index. Set to False by default.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--output_path\u003c/code\u003e: path to results\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--debug\u003c/code\u003e: turn on debugging\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--workers\u003c/code\u003e: Set number of workers/threads to use for parsing, ngram generation, and alignment.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--update_db\u003c/code\u003e: update database without rebuilding web_app. Should be used in conjunction with the --file argument\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--file\u003c/code\u003e: alignment results file to load into database. Only used with the --update_db argument.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--source_metadata\u003c/code\u003e: source metadata needed for loading database. Used only with the --update_db and --file argument.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--target_metadata\u003c/code\u003e: target metadata needed for loading database. Used only with the --update_db and --file argument.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--only_align\u003c/code\u003e: Run alignment based on preprocessed text data from a previous alignment.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--load_only_web_app\u003c/code\u003e: Define whether to load results into a database viewable via a web application. Set to True by default.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003e--skip_web_app\u003c/code\u003e: define whether to load results into a database and build a corresponding web app\u003c/li\u003e\n\u003c/ul\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eConfiguring the alignment\u003c/h2\u003e\u003ca id=\"user-content-configuring-the-alignment\" class=\"anchor\" aria-label=\"Permalink: Configuring the alignment\" href=\"#configuring-the-alignment\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eWhen running an alignment, you need to provide a configuration file to the \u003ccode\u003etextpair\u003c/code\u003e command.\nYou can find a generic copy of the file in \u003ccode\u003e/var/lib/text-pair/config/config.ini\u003c/code\u003e.\nYou should copy this file to the directory from which you are starting the alignment.\nThen you can start editing this file. Note that all parameters have comments explaining their role.\u003c/p\u003e\n\u003cp dir=\"auto\"\u003eWhile most values are reasonable defaults and don't require any edits, here are the most important settings you will want to checkout:\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eIn the TEXT_SOURCES section\u003c/h4\u003e\u003ca id=\"user-content-in-the-text_sources-section\" class=\"anchor\" aria-label=\"Permalink: In the TEXT_SOURCES section\" href=\"#in-the-text_sources-section\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eThis is where you should define the paths for your source and target files. Note that if you define no target, files from source will be compared to one another. In this case, files will be compared only when the source file is older or of the same year as the target file. This is to avoid considering a source a document which was written after the target.\nTo leverage a PhiloLogic database to extract text and relevant metadata, point to the directory of the PhiloLogic DB used. You should then use the \u003ccode\u003e--is_philo_db\u003c/code\u003e flag.\nTo link your TextPAIR web app to PhiloLogic databases (for source and target), set source_url and target_url.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eIn the TEXT_PARSING section\u003c/h4\u003e\u003ca id=\"user-content-in-the-text_parsing-section\" class=\"anchor\" aria-label=\"Permalink: In the TEXT_PARSING section\" href=\"#in-the-text_parsing-section\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003e\u003ccode\u003eparse_source_files\u003c/code\u003e, and \u003ccode\u003eparse_target_files\u003c/code\u003e: both of these setting determine whether you want textPAIR to parse your TEI files or not.\nSet to \u003ccode\u003eyes\u003c/code\u003e by default. If you are relying on parsed output from PhiloLogic, you will want to set this to \u003ccode\u003eno\u003c/code\u003e or \u003ccode\u003efalse\u003c/code\u003e.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003esource_file_type\u003c/code\u003e and \u003ccode\u003etarget_file_type\u003c/code\u003e: defines the type of text file: either TEI or plain text. If using plain text, you will need to supply a metadata file in the TEXT_SOURCES section\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003esource_words_to_keep\u003c/code\u003e and \u003ccode\u003etarget_words_to_keep\u003c/code\u003e: defines files containing lists of words (separated by a newline) which the parser should keep.\nOther words are discarded.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eIn the Preprocessing section\u003c/h4\u003e\u003ca id=\"user-content-in-the-preprocessing-section\" class=\"anchor\" aria-label=\"Permalink: In the Preprocessing section\" href=\"#in-the-preprocessing-section\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003e\u003ccode\u003esource_text_object_level\u003c/code\u003e and \u003ccode\u003etarget_text_object_level\u003c/code\u003e: Define the individual text object from which to compare other texts with.\nPossible values are \u003ccode\u003edoc\u003c/code\u003e, \u003ccode\u003ediv1\u003c/code\u003e, \u003ccode\u003ediv2\u003c/code\u003e, \u003ccode\u003ediv3\u003c/code\u003e, \u003ccode\u003epara\u003c/code\u003e, \u003ccode\u003esent\u003c/code\u003e. This is only used when relying on a PhiloLogic database.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003engram\u003c/code\u003e: Size of your ngram. The default is 3, which seems to work well in most cases. A lower number tends to produce more uninteresting short matches.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003elanguage\u003c/code\u003e: This determines the language used by the Porter Stemmer as well as by Spacy (if using more advanced POS filtering features, lemmatization, or NER).\nNote that you should use language codes from the \u003ca href=\"https://spacy.io/models/\" rel=\"nofollow\"\u003eSpacy\ndocumentation\u003c/a\u003e.\nNote that there is a section on Vector Space Alignment preprocessing. These options are for the \u003ccode\u003evsa\u003c/code\u003e matcher (see next section) only. It is not recommended that you use these at this time.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eIn the Matching section\u003c/h4\u003e\u003ca id=\"user-content-in-the-matching-section\" class=\"anchor\" aria-label=\"Permalink: In the Matching section\" href=\"#in-the-matching-section\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eNote that there are two different types of matching algorithms, with different parameters. The current recommended one is \u003ccode\u003esa\u003c/code\u003e (for sequence alignment). The \u003ccode\u003evsa\u003c/code\u003e algorith is HIGHLY experimental, still under heavy development, and is not guaranteed to work.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eRun comparison between preprocessed files manually\u003c/h2\u003e\u003ca id=\"user-content-run-comparison-between-preprocessed-files-manually\" class=\"anchor\" aria-label=\"Permalink: Run comparison between preprocessed files manually\" href=\"#run-comparison-between-preprocessed-files-manually\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eIt is possible to run a comparison between documents without having to regenerate ngrams. In this case you need to use the\n\u003ccode\u003e--only_align\u003c/code\u003e argument with the \u003ccode\u003etextpair\u003c/code\u003e command.\u003c/p\u003e\n\u003cp dir=\"auto\"\u003eExample:\u003c/p\u003e\n\u003cdiv class=\"highlight highlight-text-shell-session notranslate position-relative overflow-auto\" dir=\"auto\" data-snippet-clipboard-copy-content=\"textpair --config=config.ini--only_align --workers=10 my_database_name\"\u003e\u003cpre\u003e\u003cspan class=\"pl-c1\"\u003etextpair --config=config.ini--only_align --workers=10 my_database_name\u003c/span\u003e\u003c/pre\u003e\u003c/div\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eConfiguring the Web Application\u003c/h2\u003e\u003ca id=\"user-content-configuring-the-web-application\" class=\"anchor\" aria-label=\"Permalink: Configuring the Web Application\" href=\"#configuring-the-web-application\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eThe \u003ccode\u003etextpair\u003c/code\u003e script automatically generates a Web Application, and does so by relying on the defaults configured in the \u003ccode\u003eappConfig.json\u003c/code\u003e file which is copied to the directory where the Web Application lives, typically \u003ccode\u003e/var/www/html/text-pair/database_name\u003c/code\u003e.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch4 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003eNote on metadata naming: metadata fields extracted for the text files are prepended by \u003ccode\u003esource_\u003c/code\u003e for source texts and \u003ccode\u003etarget_\u003c/code\u003e for target texts.\u003c/h4\u003e\u003ca id=\"user-content-note-on-metadata-naming-metadata-fields-extracted-for-the-text-files-are-prepended-by-source_-for-source-texts-and-target_-for-target-texts\" class=\"anchor\" aria-label=\"Permalink: Note on metadata naming: metadata fields extracted for the text files are prepended by source_ for source texts and target_ for target texts.\" href=\"#note-on-metadata-naming-metadata-fields-extracted-for-the-text-files-are-prepended-by-source_-for-source-texts-and-target_-for-target-texts\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eIn this file, there are a number of fields that can be configured:\u003c/p\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003e\u003ccode\u003ewebServer\u003c/code\u003e: should not be changed as only Apache is supported for the foreseeable future.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003eappPath\u003c/code\u003e: this should match the WSGI configuration in \u003ccode\u003e/etc/text-pair/apache_wsgi.conf\u003c/code\u003e. Should not be changed without knowing how to work with \u003ccode\u003emod_wsgi\u003c/code\u003e.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003edatabaseName\u003c/code\u003e: Defines the name of the PostgreSQL database where the data lives.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003ematchingAlgorithm\u003c/code\u003e: DO NOT EDIT: tells the web app which matching method you used, and therefore impacts functionality within the Web UI.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003edatabaseLabel\u003c/code\u003e: Title of the database used in the Web Application\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003ebranding\u003c/code\u003e: Defines links in the header\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003esourcePhiloDBLink\u003c/code\u003e and \u003ccode\u003etargetPhiloDBLink\u003c/code\u003e: Provide URL to PhiloLogic database to contextualize shared passages.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003esourceLabel\u003c/code\u003e and \u003ccode\u003etargetLabel\u003c/code\u003e are the names of source DB and target DB. This field supports HTML tags.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003esourceCitation\u003c/code\u003e and \u003ccode\u003etargetCitation\u003c/code\u003e define the bibliography citation in results. \u003ccode\u003efield\u003c/code\u003e defines the metadata field to use, and \u003ccode\u003estyle\u003c/code\u003e is for CSS styling (using key/value for CSS rules)\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003emetadataFields\u003c/code\u003e defines the fields available for searching in the search form for \u003ccode\u003esource\u003c/code\u003e and \u003ccode\u003etarget\u003c/code\u003e.\n\u003ccode\u003elabel\u003c/code\u003e is the name used in the form and \u003ccode\u003evalue\u003c/code\u003e is the actual name of the metadata field as stored in the SQL database.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003efacetFields\u003c/code\u003e works the same way as \u003ccode\u003emetadataFields\u003c/code\u003e but for defining which fields are available in the faceted browser section.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003etimeSeriesIntervals\u003c/code\u003e defines the time intervals available for the time series functionnality.\u003c/li\u003e\n\u003cli\u003e\u003ccode\u003ebanalitiesStored\u003c/code\u003e DO NOT EDIT: defines whether banalities (formulaic passages) have been stored.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cp dir=\"auto\"\u003eOnce you've edited these fields to your liking, you can regenerate your database by running the \u003ccode\u003enpm run build\u003c/code\u003e command from the directory where the \u003ccode\u003eappConfig.json\u003c/code\u003e file is located.\u003c/p\u003e\n\u003cp dir=\"auto\"\u003eBuilt with support from the Mellon Foundation and the Fondation de la Maison des Sciences de l'Homme.\u003c/p\u003e\n\u003cdiv class=\"markdown-heading\" dir=\"auto\"\u003e\u003ch2 tabindex=\"-1\" class=\"heading-element\" dir=\"auto\"\u003ePost processing alignment results\u003c/h2\u003e\u003ca id=\"user-content-post-processing-alignment-results\" class=\"anchor\" aria-label=\"Permalink: Post processing alignment results\" href=\"#post-processing-alignment-results\"\u003e\u003csvg class=\"octicon octicon-link\" viewBox=\"0 0 16 16\" version=\"1.1\" width=\"16\" height=\"16\" aria-hidden=\"true\"\u003e\u003cpath d=\"m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z\"\u003e\u003c/path\u003e\u003c/svg\u003e\u003c/a\u003e\u003c/div\u003e\n\u003cp dir=\"auto\"\u003eTextPAIR produces two (or three if passage filtering is enabled) different files (found in the \u003ccode\u003eoutput/results/\u003c/code\u003e directory) as a result of each alignment task:\u003c/p\u003e\n\u003cul dir=\"auto\"\u003e\n\u003cli\u003eThe \u003ccode\u003ealignments.jsonl\u003c/code\u003e file: this contains all alignments which were found by TextPAIR. Each line is formatted as an individual JSON string.\u003c/li\u003e\n\u003cli\u003eThe \u003ccode\u003eduplicate_files.csv\u003c/code\u003e file: this contains a list of potential duplicate files TextPAIR identified between the source and target databases.\u003c/li\u003e\n\u003cli\u003eThe \u003ccode\u003efiltered_passages\u003c/code\u003e file: shows source_passages which were filtered out based on phrase matching. Only generated if a file containing passages to filter has been provided.\u003c/li\u003e\n\u003c/ul\u003e\n\u003cp dir=\"auto\"\u003eThese files are designed to be used for further inspection of the alignments, and potential post processing tasks such as alignment filtering or clustering.\u003c/p\u003e\n\u003c/article\u003e","loaded":true,"timedOut":false,"errorMessage":null,"headerInfo":{"toc":[{"level":1,"text":"TextPAIR (Pairwise Alignment for Intertextual Relations)","anchor":"textpair-pairwise-alignment-for-intertextual-relations","htmlText":"TextPAIR (Pairwise Alignment for Intertextual Relations)"},{"level":2,"text":"Installation","anchor":"installation","htmlText":"Installation"},{"level":3,"text":"Docker container method","anchor":"docker-container-method","htmlText":"Docker container method"},{"level":3,"text":"Manual installation","anchor":"manual-installation","htmlText":"Manual installation"},{"level":4,"text":"Dependencies","anchor":"dependencies","htmlText":"Dependencies"},{"level":4,"text":"Install script","anchor":"install-script","htmlText":"Install script"},{"level":2,"text":"Quick start","anchor":"quick-start","htmlText":"Quick start"},{"level":4,"text":"NOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target","anchor":"note-source-designates-the-source-database-from-which-reuses-are-deemed-to-originate-and-target-is-the-collection-borrowing-from-source-in-practice-the-number-of-alignments-wont-vary-significantly-if-you-swap-source-and-target","htmlText":"NOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target"},{"level":2,"text":"Configuring the alignment","anchor":"configuring-the-alignment","htmlText":"Configuring the alignment"},{"level":4,"text":"In the TEXT_SOURCES section","anchor":"in-the-text_sources-section","htmlText":"In the TEXT_SOURCES section"},{"level":4,"text":"In the TEXT_PARSING section","anchor":"in-the-text_parsing-section","htmlText":"In the TEXT_PARSING section"},{"level":4,"text":"In the Preprocessing section","anchor":"in-the-preprocessing-section","htmlText":"In the Preprocessing section"},{"level":4,"text":"In the Matching section","anchor":"in-the-matching-section","htmlText":"In the Matching section"},{"level":2,"text":"Run comparison between preprocessed files manually","anchor":"run-comparison-between-preprocessed-files-manually","htmlText":"Run comparison between preprocessed files manually"},{"level":2,"text":"Configuring the Web Application","anchor":"configuring-the-web-application","htmlText":"Configuring the Web Application"},{"level":4,"text":"Note on metadata naming: metadata fields extracted for the text files are prepended by source_ for source texts and target_ for target texts.","anchor":"note-on-metadata-naming-metadata-fields-extracted-for-the-text-files-are-prepended-by-source_-for-source-texts-and-target_-for-target-texts","htmlText":"Note on metadata naming: metadata fields extracted for the text files are prepended by source_ for source texts and target_ for target texts."},{"level":2,"text":"Post processing alignment results","anchor":"post-processing-alignment-results","htmlText":"Post processing alignment results"}],"siteNavLoginPath":"/login?return_to=https%3A%2F%2Fgithub.com%2FARTFL-Project%2Ftext-pair"}},{"displayName":"LICENSE","repoName":"text-pair","refName":"master","path":"LICENSE","preferredFileType":"license","tabName":"GPL-3.0","richText":null,"loaded":false,"timedOut":false,"errorMessage":null,"headerInfo":{"toc":null,"siteNavLoginPath":"/login?return_to=https%3A%2F%2Fgithub.com%2FARTFL-Project%2Ftext-pair"}}],"overviewFilesProcessingTime":0}},"appPayload":{"helpUrl":"https://docs.github.com","findFileWorkerPath":"/assets-cdn/worker/find-file-worker-9f8a877aa99f.js","findInFileWorkerPath":"/assets-cdn/worker/find-in-file-worker-96e76d5fdb2c.js","githubDevUrl":null,"enabled_features":{"copilot_workspace":null,"code_nav_ui_events":false,"overview_shared_code_dropdown_button":false,"react_blob_overlay":false,"copilot_conversational_ux_embedding_update":false,"copilot_smell_icebreaker_ux":true,"accessible_code_button":true}}}}</script> <div 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LinkButton-module__code-view-link-button--xvCGA flex-items-center fgColor-default" data-loading="false" data-size="small" data-variant="invisible" aria-describedby=":Raqj8pab:-loading-announcement"><span data-component="buttonContent" data-align="center" class="prc-Button-ButtonContent-HKbr-"><span data-component="leadingVisual" class="prc-Button-Visual-2epfX prc-Button-VisualWrap-Db-eB"><svg aria-hidden="true" focusable="false" class="octicon octicon-history" viewBox="0 0 16 16" width="16" height="16" fill="currentColor" style="display:inline-block;user-select:none;vertical-align:text-bottom;overflow:visible"><path d="m.427 1.927 1.215 1.215a8.002 8.002 0 1 1-1.6 5.685.75.75 0 1 1 1.493-.154 6.5 6.5 0 1 0 1.18-4.458l1.358 1.358A.25.25 0 0 1 3.896 6H.25A.25.25 0 0 1 0 5.75V2.104a.25.25 0 0 1 .427-.177ZM7.75 4a.75.75 0 0 1 .75.75v2.992l2.028.812a.75.75 0 0 1-.557 1.392l-2.5-1A.751.751 0 0 1 7 8.25v-3.5A.75.75 0 0 1 7.75 4Z"></path></svg></span><span data-component="text" 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class="Box-sc-g0xbh4-0 QkQOb js-snippet-clipboard-copy-unpositioned undefined" data-hpc="true"><article class="markdown-body entry-content container-lg" itemprop="text"><p dir="auto">"Nous ne faisons que nous entregloser" Montaigne wrote famously in his <i>Essais</i>... Since all we do is glose over what's already been written, we may as well build a tool to detect these intertextual relationships...</p> <div class="markdown-heading" dir="auto"><h1 tabindex="-1" class="heading-element" dir="auto">TextPAIR (Pairwise Alignment for Intertextual Relations)</h1><a id="user-content-textpair-pairwise-alignment-for-intertextual-relations" class="anchor" aria-label="Permalink: TextPAIR (Pairwise Alignment for Intertextual Relations)" href="#textpair-pairwise-alignment-for-intertextual-relations"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">TextPAIR is a scalable and high-performance sequence aligner for humanities text analysis designed to identify "similar passages" in large collections of texts. These may include direct quotations, plagiarism and other forms of borrowings, commonplace expressions and the like. It is a complete rewrite and rethink of the <a href="https://code.google.com/archive/p/text-pair/" rel="nofollow">original implementation</a> released in 2009.</p> <p dir="auto">While TextPAIR was developed in response to the fairly specific phenomenon of similar passages across literary works, the sequence analysis techniques employed in TextPAIR were developed in widely disparate fields, such as bioinformatics and computer science, with applications ranging from genome sequencing to plagiarism detection. TextPAIR generates a set of overlapping word sequence shingles for every text in a corpus, then stores and indexes that information to be analyzed against shingles from other texts. For example, the opening declaration from Rousseau's Du Contrat Social,</p> <p dir="auto"><code>"L'homme est né libre, est partout il est dans les fers. Tel se croit le maître des autres, qui ne laisse pas d'être plus esclave qu'eux,"</code></p> <p dir="auto">would be rendered in trigram shingles (with lemmatization, accents flattened and function words removed) as:</p> <p dir="auto"><code>homme_libre_partout, libre_partout_fer, partout_fer_croire, fer_croire_maitre, croire_maitre_laisser, maitre_laisser_esclave</code></p> <p dir="auto">Common shingles across texts indicate many different types of textual borrowings, from direct citations to more ambiguous and unattributed usages of a passage. Using a simple search form, the user can quickly identify similar passages shared between different texts in one database, or even across databases, such as in the example below.</p> <p dir="auto"><a target="_blank" rel="noopener noreferrer" href="/ARTFL-Project/text-pair/blob/master/example.png"><img src="/ARTFL-Project/text-pair/raw/master/example.png" alt="alt text" style="max-width: 100%;"></a></p> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Installation</h2><a id="user-content-installation" class="anchor" aria-label="Permalink: Installation" href="#installation"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">The recommended install is to build your own Docker image and run TextPAIR inside a container.</p> <div class="markdown-heading" dir="auto"><h3 tabindex="-1" class="heading-element" dir="auto">Docker container method</h3><a id="user-content-docker-container-method" class="anchor" aria-label="Permalink: Docker container method" href="#docker-container-method"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <ul dir="auto"> <li>Go to the docker folder and build a docker image: <code>docker build -t textpair .</code></li> <li>Start a new container: <code>docker run -td -p 80:80 --name textpair artfl/textpair init_textpair_db</code> Note that you may want to customize the <code>run</code> command according to your needs (e.g. to mount a volume for your data) You will need to copy your texts to the container, and then follow the normal procedure described below once inside the container.</li> </ul> <p dir="auto">If you do run into the issue where the web server does not respond, restart the web server with the following command: <code>/var/lib/text-pair/api_server/web_server.sh &</code></p> <div class="markdown-heading" dir="auto"><h3 tabindex="-1" class="heading-element" dir="auto">Manual installation</h3><a id="user-content-manual-installation" class="anchor" aria-label="Permalink: Manual installation" href="#manual-installation"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">If you wish to install TextPAIR on a host machine, note that TextPair will only run on 64 bit Linux, see below.</p> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">Dependencies</h4><a id="user-content-dependencies" class="anchor" aria-label="Permalink: Dependencies" href="#dependencies"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <ul dir="auto"> <li>Python 3.10 and up</li> <li>Node and NPM</li> <li>PostgreSQL: you will need to create a dedicated database and create a user with read/write permissions on that database. You will also need to create the pg_trgm extension on that database by running the following command in the PostgreSQL shell: <code>CREATE EXTENSION pg_trgm;</code> run as a superuser.</li> </ul> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">Install script</h4><a id="user-content-install-script" class="anchor" aria-label="Permalink: Install script" href="#install-script"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">See <a href="/ARTFL-Project/text-pair/blob/master/docs/ubuntu_installation.md">Ubuntu install instructions</a></p> <ul dir="auto"> <li>Run <code>install.sh</code> script. This should install all needed components</li> <li>Make sure you include <code>/etc/text-pair/apache_wsgi.conf</code> in your main Apache configuration file to enable searching</li> <li>Edit <code>/etc/text-pair/global_settings.ini</code> to provide your PostgreSQL user, database, and password.</li> </ul> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Quick start</h2><a id="user-content-quick-start" class="anchor" aria-label="Permalink: Quick start" href="#quick-start"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">Before running any alignment, make sure you edit your copy of <code>config.ini</code>. See <a href="#configuring-the-alignment">below</a> for details</p> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">NOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target</h4><a id="user-content-note-source-designates-the-source-database-from-which-reuses-are-deemed-to-originate-and-target-is-the-collection-borrowing-from-source-in-practice-the-number-of-alignments-wont-vary-significantly-if-you-swap-source-and-target" class="anchor" aria-label="Permalink: NOTE: source designates the source database from which reuses are deemed to originate, and target is the collection borrowing from source. In practice, the number of alignments won't vary significantly if you swap source and target" href="#note-source-designates-the-source-database-from-which-reuses-are-deemed-to-originate-and-target-is-the-collection-borrowing-from-source-in-practice-the-number-of-alignments-wont-vary-significantly-if-you-swap-source-and-target"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">The sequence aligner is executed via the <code>textpair</code> command. The basic command is: <code>textpair --config=/path/to/config [OPTIONS] [database_name]</code></p> <p dir="auto"><code>textpair</code> takes the following command-line arguments:</p> <ul dir="auto"> <li><code>--config</code>: This argument is required. It defines the path to the configuration file where preprocessing, matching, and web application settings are set</li> <li><code>--is_philo_db</code>: Define if files are from a PhiloLogic database. If set to <code>True</code> metadata will be fetched using the PhiloLogic metadata index. Set to False by default.</li> <li><code>--output_path</code>: path to results</li> <li><code>--debug</code>: turn on debugging</li> <li><code>--workers</code>: Set number of workers/threads to use for parsing, ngram generation, and alignment.</li> <li><code>--update_db</code>: update database without rebuilding web_app. Should be used in conjunction with the --file argument</li> <li><code>--file</code>: alignment results file to load into database. Only used with the --update_db argument.</li> <li><code>--source_metadata</code>: source metadata needed for loading database. Used only with the --update_db and --file argument.</li> <li><code>--target_metadata</code>: target metadata needed for loading database. Used only with the --update_db and --file argument.</li> <li><code>--only_align</code>: Run alignment based on preprocessed text data from a previous alignment.</li> <li><code>--load_only_web_app</code>: Define whether to load results into a database viewable via a web application. Set to True by default.</li> <li><code>--skip_web_app</code>: define whether to load results into a database and build a corresponding web app</li> </ul> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Configuring the alignment</h2><a id="user-content-configuring-the-alignment" class="anchor" aria-label="Permalink: Configuring the alignment" href="#configuring-the-alignment"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">When running an alignment, you need to provide a configuration file to the <code>textpair</code> command. You can find a generic copy of the file in <code>/var/lib/text-pair/config/config.ini</code>. You should copy this file to the directory from which you are starting the alignment. Then you can start editing this file. Note that all parameters have comments explaining their role.</p> <p dir="auto">While most values are reasonable defaults and don't require any edits, here are the most important settings you will want to checkout:</p> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">In the TEXT_SOURCES section</h4><a id="user-content-in-the-text_sources-section" class="anchor" aria-label="Permalink: In the TEXT_SOURCES section" href="#in-the-text_sources-section"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">This is where you should define the paths for your source and target files. Note that if you define no target, files from source will be compared to one another. In this case, files will be compared only when the source file is older or of the same year as the target file. This is to avoid considering a source a document which was written after the target. To leverage a PhiloLogic database to extract text and relevant metadata, point to the directory of the PhiloLogic DB used. You should then use the <code>--is_philo_db</code> flag. To link your TextPAIR web app to PhiloLogic databases (for source and target), set source_url and target_url.</p> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">In the TEXT_PARSING section</h4><a id="user-content-in-the-text_parsing-section" class="anchor" aria-label="Permalink: In the TEXT_PARSING section" href="#in-the-text_parsing-section"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <ul dir="auto"> <li><code>parse_source_files</code>, and <code>parse_target_files</code>: both of these setting determine whether you want textPAIR to parse your TEI files or not. Set to <code>yes</code> by default. If you are relying on parsed output from PhiloLogic, you will want to set this to <code>no</code> or <code>false</code>.</li> <li><code>source_file_type</code> and <code>target_file_type</code>: defines the type of text file: either TEI or plain text. If using plain text, you will need to supply a metadata file in the TEXT_SOURCES section</li> <li><code>source_words_to_keep</code> and <code>target_words_to_keep</code>: defines files containing lists of words (separated by a newline) which the parser should keep. Other words are discarded.</li> </ul> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">In the Preprocessing section</h4><a id="user-content-in-the-preprocessing-section" class="anchor" aria-label="Permalink: In the Preprocessing section" href="#in-the-preprocessing-section"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <ul dir="auto"> <li><code>source_text_object_level</code> and <code>target_text_object_level</code>: Define the individual text object from which to compare other texts with. Possible values are <code>doc</code>, <code>div1</code>, <code>div2</code>, <code>div3</code>, <code>para</code>, <code>sent</code>. This is only used when relying on a PhiloLogic database.</li> <li><code>ngram</code>: Size of your ngram. The default is 3, which seems to work well in most cases. A lower number tends to produce more uninteresting short matches.</li> <li><code>language</code>: This determines the language used by the Porter Stemmer as well as by Spacy (if using more advanced POS filtering features, lemmatization, or NER). Note that you should use language codes from the <a href="https://spacy.io/models/" rel="nofollow">Spacy documentation</a>. Note that there is a section on Vector Space Alignment preprocessing. These options are for the <code>vsa</code> matcher (see next section) only. It is not recommended that you use these at this time.</li> </ul> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">In the Matching section</h4><a id="user-content-in-the-matching-section" class="anchor" aria-label="Permalink: In the Matching section" href="#in-the-matching-section"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">Note that there are two different types of matching algorithms, with different parameters. The current recommended one is <code>sa</code> (for sequence alignment). The <code>vsa</code> algorith is HIGHLY experimental, still under heavy development, and is not guaranteed to work.</p> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Run comparison between preprocessed files manually</h2><a id="user-content-run-comparison-between-preprocessed-files-manually" class="anchor" aria-label="Permalink: Run comparison between preprocessed files manually" href="#run-comparison-between-preprocessed-files-manually"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">It is possible to run a comparison between documents without having to regenerate ngrams. In this case you need to use the <code>--only_align</code> argument with the <code>textpair</code> command.</p> <p dir="auto">Example:</p> <div class="highlight highlight-text-shell-session notranslate position-relative overflow-auto" dir="auto" data-snippet-clipboard-copy-content="textpair --config=config.ini--only_align --workers=10 my_database_name"><pre><span class="pl-c1">textpair --config=config.ini--only_align --workers=10 my_database_name</span></pre></div> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Configuring the Web Application</h2><a id="user-content-configuring-the-web-application" class="anchor" aria-label="Permalink: Configuring the Web Application" href="#configuring-the-web-application"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">The <code>textpair</code> script automatically generates a Web Application, and does so by relying on the defaults configured in the <code>appConfig.json</code> file which is copied to the directory where the Web Application lives, typically <code>/var/www/html/text-pair/database_name</code>.</p> <div class="markdown-heading" dir="auto"><h4 tabindex="-1" class="heading-element" dir="auto">Note on metadata naming: metadata fields extracted for the text files are prepended by <code>source_</code> for source texts and <code>target_</code> for target texts.</h4><a id="user-content-note-on-metadata-naming-metadata-fields-extracted-for-the-text-files-are-prepended-by-source_-for-source-texts-and-target_-for-target-texts" class="anchor" aria-label="Permalink: Note on metadata naming: metadata fields extracted for the text files are prepended by source_ for source texts and target_ for target texts." href="#note-on-metadata-naming-metadata-fields-extracted-for-the-text-files-are-prepended-by-source_-for-source-texts-and-target_-for-target-texts"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">In this file, there are a number of fields that can be configured:</p> <ul dir="auto"> <li><code>webServer</code>: should not be changed as only Apache is supported for the foreseeable future.</li> <li><code>appPath</code>: this should match the WSGI configuration in <code>/etc/text-pair/apache_wsgi.conf</code>. Should not be changed without knowing how to work with <code>mod_wsgi</code>.</li> <li><code>databaseName</code>: Defines the name of the PostgreSQL database where the data lives.</li> <li><code>matchingAlgorithm</code>: DO NOT EDIT: tells the web app which matching method you used, and therefore impacts functionality within the Web UI.</li> <li><code>databaseLabel</code>: Title of the database used in the Web Application</li> <li><code>branding</code>: Defines links in the header</li> <li><code>sourcePhiloDBLink</code> and <code>targetPhiloDBLink</code>: Provide URL to PhiloLogic database to contextualize shared passages.</li> <li><code>sourceLabel</code> and <code>targetLabel</code> are the names of source DB and target DB. This field supports HTML tags.</li> <li><code>sourceCitation</code> and <code>targetCitation</code> define the bibliography citation in results. <code>field</code> defines the metadata field to use, and <code>style</code> is for CSS styling (using key/value for CSS rules)</li> <li><code>metadataFields</code> defines the fields available for searching in the search form for <code>source</code> and <code>target</code>. <code>label</code> is the name used in the form and <code>value</code> is the actual name of the metadata field as stored in the SQL database.</li> <li><code>facetFields</code> works the same way as <code>metadataFields</code> but for defining which fields are available in the faceted browser section.</li> <li><code>timeSeriesIntervals</code> defines the time intervals available for the time series functionnality.</li> <li><code>banalitiesStored</code> DO NOT EDIT: defines whether banalities (formulaic passages) have been stored.</li> </ul> <p dir="auto">Once you've edited these fields to your liking, you can regenerate your database by running the <code>npm run build</code> command from the directory where the <code>appConfig.json</code> file is located.</p> <p dir="auto">Built with support from the Mellon Foundation and the Fondation de la Maison des Sciences de l'Homme.</p> <div class="markdown-heading" dir="auto"><h2 tabindex="-1" class="heading-element" dir="auto">Post processing alignment results</h2><a id="user-content-post-processing-alignment-results" class="anchor" aria-label="Permalink: Post processing alignment results" href="#post-processing-alignment-results"><svg class="octicon octicon-link" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path d="m7.775 3.275 1.25-1.25a3.5 3.5 0 1 1 4.95 4.95l-2.5 2.5a3.5 3.5 0 0 1-4.95 0 .751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018 1.998 1.998 0 0 0 2.83 0l2.5-2.5a2.002 2.002 0 0 0-2.83-2.83l-1.25 1.25a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042Zm-4.69 9.64a1.998 1.998 0 0 0 2.83 0l1.25-1.25a.751.751 0 0 1 1.042.018.751.751 0 0 1 .018 1.042l-1.25 1.25a3.5 3.5 0 1 1-4.95-4.95l2.5-2.5a3.5 3.5 0 0 1 4.95 0 .751.751 0 0 1-.018 1.042.751.751 0 0 1-1.042.018 1.998 1.998 0 0 0-2.83 0l-2.5 2.5a1.998 1.998 0 0 0 0 2.83Z"></path></svg></a></div> <p dir="auto">TextPAIR produces two (or three if passage filtering is enabled) different files (found in the <code>output/results/</code> directory) as a result of each alignment task:</p> <ul dir="auto"> <li>The <code>alignments.jsonl</code> file: this contains all alignments which were found by TextPAIR. Each line is formatted as an individual JSON string.</li> <li>The <code>duplicate_files.csv</code> file: this contains a list of potential duplicate files TextPAIR identified between the source and target databases.</li> <li>The <code>filtered_passages</code> file: shows source_passages which were filtered out based on phrase matching. Only generated if a file containing passages to filter has been provided.</li> </ul> <p dir="auto">These files are designed to be used for further inspection of the alignments, and potential post processing tasks such as alignment filtering or clustering.</p> </article></div></div></div></div></div> <!-- --> <!-- --> <script type="application/json" id="__PRIMER_DATA_:R0:__">{"resolvedServerColorMode":"day"}</script></div> </react-partial> <input type="hidden" data-csrf="true" value="L0fykx0flc1dF2IKufbzTonD05J3j283csQuOn2pH+VtTJLShBhim5P+LOo5jROMzzRGeXdk/mqiW9MmAIUV+w==" /> </div> <div data-view-component="true" class="Layout-sidebar"> <div class="BorderGrid about-margin" data-pjax> <div class="BorderGrid-row"> <div class="BorderGrid-cell"> <div class="hide-sm hide-md"> <h2 class="mb-3 h4">About</h2> <p class="f4 my-3"> High-performance text aligner for large collections of texts </p> <h3 class="sr-only">Resources</h3> <div class="mt-2"> <a class="Link--muted" 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aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-star mr-2"> <path d="M8 .25a.75.75 0 0 1 .673.418l1.882 3.815 4.21.612a.75.75 0 0 1 .416 1.279l-3.046 2.97.719 4.192a.751.751 0 0 1-1.088.791L8 12.347l-3.766 1.98a.75.75 0 0 1-1.088-.79l.72-4.194L.818 6.374a.75.75 0 0 1 .416-1.28l4.21-.611L7.327.668A.75.75 0 0 1 8 .25Zm0 2.445L6.615 5.5a.75.75 0 0 1-.564.41l-3.097.45 2.24 2.184a.75.75 0 0 1 .216.664l-.528 3.084 2.769-1.456a.75.75 0 0 1 .698 0l2.77 1.456-.53-3.084a.75.75 0 0 1 .216-.664l2.24-2.183-3.096-.45a.75.75 0 0 1-.564-.41L8 2.694Z"></path> </svg> <strong>48</strong> stars</a> </div> <h3 class="sr-only">Watchers</h3> <div class="mt-2"> <a href="/ARTFL-Project/text-pair/watchers" data-view-component="true" class="Link Link--muted"><svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-eye mr-2"> <path d="M8 2c1.981 0 3.671.992 4.933 2.078 1.27 1.091 2.187 2.345 2.637 3.023a1.62 1.62 0 0 1 0 1.798c-.45.678-1.367 1.932-2.637 3.023C11.67 13.008 9.981 14 8 14c-1.981 0-3.671-.992-4.933-2.078C1.797 10.83.88 9.576.43 8.898a1.62 1.62 0 0 1 0-1.798c.45-.677 1.367-1.931 2.637-3.022C4.33 2.992 6.019 2 8 2ZM1.679 7.932a.12.12 0 0 0 0 .136c.411.622 1.241 1.75 2.366 2.717C5.176 11.758 6.527 12.5 8 12.5c1.473 0 2.825-.742 3.955-1.715 1.124-.967 1.954-2.096 2.366-2.717a.12.12 0 0 0 0-.136c-.412-.621-1.242-1.75-2.366-2.717C10.824 4.242 9.473 3.5 8 3.5c-1.473 0-2.825.742-3.955 1.715-1.124.967-1.954 2.096-2.366 2.717ZM8 10a2 2 0 1 1-.001-3.999A2 2 0 0 1 8 10Z"></path> </svg> <strong>12</strong> watching</a> </div> <h3 class="sr-only">Forks</h3> <div class="mt-2"> <a href="/ARTFL-Project/text-pair/forks" data-view-component="true" class="Link Link--muted"><svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-repo-forked mr-2"> <path d="M5 5.372v.878c0 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d-flex no-underline" data-pjax="#repo-content-pjax-container" data-turbo-frame="repo-content-turbo-frame" href="/ARTFL-Project/text-pair/releases/tag/v2.2.0.1"> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-tag flex-shrink-0 mt-1 color-fg-success"> <path d="M1 7.775V2.75C1 1.784 1.784 1 2.75 1h5.025c.464 0 .91.184 1.238.513l6.25 6.25a1.75 1.75 0 0 1 0 2.474l-5.026 5.026a1.75 1.75 0 0 1-2.474 0l-6.25-6.25A1.752 1.752 0 0 1 1 7.775Zm1.5 0c0 .066.026.13.073.177l6.25 6.25a.25.25 0 0 0 .354 0l5.025-5.025a.25.25 0 0 0 0-.354l-6.25-6.25a.25.25 0 0 0-.177-.073H2.75a.25.25 0 0 0-.25.25ZM6 5a1 1 0 1 1 0 2 1 1 0 0 1 0-2Z"></path> </svg> <div class="ml-2 min-width-0"> <div class="d-flex"> <span class="css-truncate css-truncate-target text-bold mr-2" style="max-width: none;">TextPAIR 2.2.0.1</span> <span title="Label: Latest" data-view-component="true" class="Label Label--success flex-shrink-0"> Latest </span> 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<button type="button" class="Link--secondary underline-on-hover border-0 p-0 color-bg-transparent" data-action="click:cookie-consent-link#showConsentManagement" data-analytics-event="{"location":"footer","action":"dont_share_info","context":"subfooter","tag":"link","label":"dont_share_info_link_subfooter_footer"}" > Do not share my personal information </button> </cookie-consent-link> </li> </ul> </nav> </div> </footer> <ghcc-consent id="ghcc" class="position-fixed bottom-0 left-0" style="z-index: 999999" data-initial-cookie-consent-allowed="" data-cookie-consent-required="false"></ghcc-consent> <div id="ajax-error-message" class="ajax-error-message flash flash-error" hidden> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-alert"> <path d="M6.457 1.047c.659-1.234 2.427-1.234 3.086 0l6.082 11.378A1.75 1.75 0 0 1 14.082 15H1.918a1.75 1.75 0 0 1-1.543-2.575Zm1.763.707a.25.25 0 0 0-.44 0L1.698 13.132a.25.25 0 0 0 .22.368h12.164a.25.25 0 0 0 .22-.368Zm.53 3.996v2.5a.75.75 0 0 1-1.5 0v-2.5a.75.75 0 0 1 1.5 0ZM9 11a1 1 0 1 1-2 0 1 1 0 0 1 2 0Z"></path> </svg> <button type="button" class="flash-close js-ajax-error-dismiss" aria-label="Dismiss error"> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-x"> <path d="M3.72 3.72a.75.75 0 0 1 1.06 0L8 6.94l3.22-3.22a.749.749 0 0 1 1.275.326.749.749 0 0 1-.215.734L9.06 8l3.22 3.22a.749.749 0 0 1-.326 1.275.749.749 0 0 1-.734-.215L8 9.06l-3.22 3.22a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042L6.94 8 3.72 4.78a.75.75 0 0 1 0-1.06Z"></path> </svg> </button> You can’t perform that action at this time. </div> <template id="site-details-dialog"> <details class="details-reset details-overlay details-overlay-dark lh-default color-fg-default hx_rsm" open> <summary role="button" aria-label="Close dialog"></summary> <details-dialog class="Box Box--overlay d-flex flex-column anim-fade-in fast hx_rsm-dialog hx_rsm-modal"> <button class="Box-btn-octicon m-0 btn-octicon position-absolute right-0 top-0" type="button" aria-label="Close dialog" data-close-dialog> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-x"> <path d="M3.72 3.72a.75.75 0 0 1 1.06 0L8 6.94l3.22-3.22a.749.749 0 0 1 1.275.326.749.749 0 0 1-.215.734L9.06 8l3.22 3.22a.749.749 0 0 1-.326 1.275.749.749 0 0 1-.734-.215L8 9.06l-3.22 3.22a.751.751 0 0 1-1.042-.018.751.751 0 0 1-.018-1.042L6.94 8 3.72 4.78a.75.75 0 0 1 0-1.06Z"></path> </svg> </button> <div class="octocat-spinner my-6 js-details-dialog-spinner"></div> </details-dialog> </details> </template> <div class="Popover js-hovercard-content position-absolute" style="display: none; outline: none;"> <div class="Popover-message Popover-message--bottom-left Popover-message--large Box color-shadow-large" style="width:360px;"> </div> </div> <template id="snippet-clipboard-copy-button"> <div class="zeroclipboard-container position-absolute right-0 top-0"> <clipboard-copy aria-label="Copy" class="ClipboardButton btn js-clipboard-copy m-2 p-0" data-copy-feedback="Copied!" data-tooltip-direction="w"> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-copy js-clipboard-copy-icon m-2"> <path d="M0 6.75C0 5.784.784 5 1.75 5h1.5a.75.75 0 0 1 0 1.5h-1.5a.25.25 0 0 0-.25.25v7.5c0 .138.112.25.25.25h7.5a.25.25 0 0 0 .25-.25v-1.5a.75.75 0 0 1 1.5 0v1.5A1.75 1.75 0 0 1 9.25 16h-7.5A1.75 1.75 0 0 1 0 14.25Z"></path><path d="M5 1.75C5 .784 5.784 0 6.75 0h7.5C15.216 0 16 .784 16 1.75v7.5A1.75 1.75 0 0 1 14.25 11h-7.5A1.75 1.75 0 0 1 5 9.25Zm1.75-.25a.25.25 0 0 0-.25.25v7.5c0 .138.112.25.25.25h7.5a.25.25 0 0 0 .25-.25v-7.5a.25.25 0 0 0-.25-.25Z"></path> </svg> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-check js-clipboard-check-icon color-fg-success d-none m-2"> <path d="M13.78 4.22a.75.75 0 0 1 0 1.06l-7.25 7.25a.75.75 0 0 1-1.06 0L2.22 9.28a.751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018L6 10.94l6.72-6.72a.75.75 0 0 1 1.06 0Z"></path> </svg> </clipboard-copy> </div> </template> <template id="snippet-clipboard-copy-button-unpositioned"> <div class="zeroclipboard-container"> <clipboard-copy aria-label="Copy" class="ClipboardButton btn btn-invisible js-clipboard-copy m-2 p-0 d-flex flex-justify-center flex-items-center" data-copy-feedback="Copied!" data-tooltip-direction="w"> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-copy js-clipboard-copy-icon"> <path d="M0 6.75C0 5.784.784 5 1.75 5h1.5a.75.75 0 0 1 0 1.5h-1.5a.25.25 0 0 0-.25.25v7.5c0 .138.112.25.25.25h7.5a.25.25 0 0 0 .25-.25v-1.5a.75.75 0 0 1 1.5 0v1.5A1.75 1.75 0 0 1 9.25 16h-7.5A1.75 1.75 0 0 1 0 14.25Z"></path><path d="M5 1.75C5 .784 5.784 0 6.75 0h7.5C15.216 0 16 .784 16 1.75v7.5A1.75 1.75 0 0 1 14.25 11h-7.5A1.75 1.75 0 0 1 5 9.25Zm1.75-.25a.25.25 0 0 0-.25.25v7.5c0 .138.112.25.25.25h7.5a.25.25 0 0 0 .25-.25v-7.5a.25.25 0 0 0-.25-.25Z"></path> </svg> <svg aria-hidden="true" height="16" viewBox="0 0 16 16" version="1.1" width="16" data-view-component="true" class="octicon octicon-check js-clipboard-check-icon color-fg-success d-none"> <path d="M13.78 4.22a.75.75 0 0 1 0 1.06l-7.25 7.25a.75.75 0 0 1-1.06 0L2.22 9.28a.751.751 0 0 1 .018-1.042.751.751 0 0 1 1.042-.018L6 10.94l6.72-6.72a.75.75 0 0 1 1.06 0Z"></path> </svg> </clipboard-copy> </div> </template> </div> <div id="js-global-screen-reader-notice" class="sr-only mt-n1" aria-live="polite" aria-atomic="true" ></div> <div id="js-global-screen-reader-notice-assertive" class="sr-only mt-n1" aria-live="assertive" aria-atomic="true"></div> </body> </html>