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class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="text-primary-500 icon icon--sys-biology icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <div class="flex-1"> Glycomics </div></li><li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="text-primary-500 icon icon--protein icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <div class="flex-1"> Proteins & Proteomes </div></li> <li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--150"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <div class="flex-1"> Software tool </div></li></ul></div> <div class="mb-8">GlycoSiteAlign selectively aligns amino acid sequences surrounding glycosylation sites (by default, 20 positions on each side of the glycosylated residue) depending on structural properties of the glycan attached 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These properties are either general (e.g., "fucosylated") or specific, such as precise composition, and are proposed in a drop-down list.</div> <div class="flex flex-col items-start gap-8 lg:items-center lg:gap-12 lg:flex-row"><div class="flex items-start justify-center lg:justify-start"><a href="https://glycoproteome.expasy.org/glycositealign/" target="_blank" rel="noopener noreferer" class="btn btn--primary"> Browse the resource website </a></div> <div class="flex flex-col items-start gap-3">  </div></div></div> <footer class="p-5 resource-page__info bg-neutral-100 border-neutral-200 border-t border-b"><div><p>Developed by the <a href="https://www.sib.swiss/frederique-lisacek-group" rel="noopener noreferrer nofollow">Proteome Informatics group</a>.</p></div> </footer></section></div> <aside class="lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><div class="resource-page__ontologie"><section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> What you can do with this resource </h2> <ul><li class="inline-block"><a href="/search/Multiple%20sequence%20alignment?type=keyword"> Multiple sequence alignment </a></li></ul></section> <section class="p-5 bg-neutral-100 border-neutral-200 border-t border-b"><h2 class="mb-5 h4"> Browse these keywords in Expasy </h2> <ul><li class="inline-block"><a href="/search/Carbohydrates?type=keyword"> Carbohydrates </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20modifications?type=keyword"> Protein modifications </a><span>,聽</span></li><li class="inline-block"><a href="/search/Protein%20sites,%20features%20and%20motifs?type=keyword"> Protein sites, features and motifs </a></li></ul></section></div></aside></div></div> <section class="py-5 mt-10 border-neutral-200 border-t"><h2 class="mb-5 h3"> You might also be interested in </h2> <ul class="flex-grid flex-grid--multiline flex-grid--even"><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article 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aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycomod" class="resource__link"><h3 class="h5"> GlycoMod </h3></a> <div class="text-sm leading-snug mt-1"> Possible oligosaccharide structures on proteins from masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/glyconnect-compozitor" class="resource__link"><h3 class="h5"> GlyConnect Compozitor </h3></a> <div class="text-sm leading-snug mt-1"> Contextualises glycan composition sets </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyco-expasy" class="resource__link"><h3 class="h5"> Glyco@Expasy </h3></a> <div class="text-sm leading-snug mt-1"> Zooming in on web-based glycoinformatics resources </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Systems Biology </li><li class="inline-block sr-only"><span>, </span> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hmo-glycologue" class="resource__link"><h3 class="h5"> HMO-Glycologue </h3></a> <div class="text-sm leading-snug mt-1"> Simulator of Human Milk Oligosaccharide synthesis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect-sparql-endpoint" class="resource__link"><h3 class="h5"> GlyConnect SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to GlyConnect </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/gag-db" class="resource__link"><h3 class="h5"> GAG-DB </h3></a> <div class="text-sm leading-snug mt-1"> 3D structures of glycosaminoglycans </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/mzjava" class="resource__link"><h3 class="h5"> MzJava </h3></a> <div class="text-sm leading-snug mt-1"> Open source Java class library to process MS fragmentation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/unilectin" class="resource__link"><h3 class="h5"> UniLectin </h3></a> <div class="text-sm leading-snug mt-1"> Structural and functional classification of lectins </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Metabolomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/msight" class="resource__link"><h3 class="h5"> MSight </h3></a> <div class="text-sm leading-snug mt-1"> Mass Spectrometry Imager </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/sulfinator" class="resource__link"><h3 class="h5"> Sulfinator </h3></a> <div class="text-sm leading-snug mt-1"> Predict tyrosine sulfation sites in protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/peptidemass" class="resource__link"><h3 class="h5"> PeptideMass </h3></a> <div class="text-sm leading-snug mt-1"> Theoretical protein cleavage by a given enzyme </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/myristoylator" class="resource__link"><h3 class="h5"> Myristoylator </h3></a> <div class="text-sm leading-snug mt-1"> N-terminal myristoylation of proteins by neural networks </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findpept" class="resource__link"><h3 class="h5"> FindPept </h3></a> <div class="text-sm leading-snug mt-1"> Unspecific protein cleavage from experimental masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/findmod" class="resource__link"><h3 class="h5"> FindMod </h3></a> <div class="text-sm leading-snug mt-1"> Potential PTMs and single amino acid substitutions </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/uniprotkb-swiss-prot" class="resource__link"><h3 class="h5"> UniProtKB/Swiss-Prot </h3></a> <div class="text-sm leading-snug mt-1"> Protein knowledgebase </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/uniprotkb" class="resource__link"><h3 class="h5"> UniProtKB </h3></a> <div class="text-sm leading-snug mt-1"> Protein sequence database </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/pratt" class="resource__link"><h3 class="h5"> PRATT </h3></a> <div class="text-sm leading-snug mt-1"> Conserved patterns in a set of protein sequences </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hamap-scan" class="resource__link"><h3 class="h5"> HAMAP-Scan </h3></a> <div class="text-sm leading-snug mt-1"> Scanning of protein sequences against HAMAP families </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Software tool </li></ul></li></ul></div></div> <a href="/resources/hamap" class="resource__link"><h3 class="h5"> HAMAP </h3></a> <div class="text-sm leading-snug mt-1"> UniProtKB family classification and annotation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/uniprot-sparql-endpoint" class="resource__link"><h3 class="h5"> UniProt SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to UniProt and related data </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"> Proteins & Proteomes </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"> Database </li></ul></li></ul></div></div> <a href="/resources/hamap-sparql-endpoint" class="resource__link"><h3 class="h5"> HAMAP SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to the HAMAP annotation rules </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" 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The tool takes advantage of compositions being related to one another through shared monosaccharide counts and outputs interactive graphs summarising information searched in the database.",media_url:a,group_info:X},{id:cK,title:cL,slug:cM,pinned:T,types:[{id:d,icon:d,title:n}],url:cN,documentation_url:a,tutorial_url:a,short_description:cO,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]},{id:m,title:q,icon:p,children:[]}],created_at:cP,updated_at:cQ,description:"Glyco@Expasy centralizes web-based glycoinformatics resources developed within an international network of glycoscientists. The philosophy is that it should be {glycoscientist AND protein scientist}鈥揻riendly with the aim of (1) popularizing the use of bioinformatics in glycobiology and (2) emphasizing the relationship between glycobiology and protein-oriented bioinformatics resources. 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It can the predict the effect of enzyme knock-out on the network.",media_url:a,group_info:X},{id:cY,title:cZ,slug:c_,pinned:e,types:[{id:d,icon:d,title:n}],url:c$,documentation_url:a,tutorial_url:a,short_description:da,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]},{id:m,title:q,icon:p,children:[]}],created_at:db,updated_at:dc,description:"SPARQL access to GlyConnect, a platform integrating several sources of information to characterise the molecular actors of glycosylation, mainly glycoproteins and N- and O-linked glycans. 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It provides algorithms and data structures for processing mass spectra and their associated biological molecules, such as small molecules, glycans, proteins, and peptides with post-translational modifications. MzJava includes methods to perform mass calculation, protein digestion, peptide and glycan fragmentation, MS\u002FMS signal processing, and scoring for spectra-spectra and peptide\u002Fglycan-spectra matches.",media_url:a,group_info:X},{id:dr,title:ds,slug:dt,pinned:e,types:[{id:d,icon:d,title:n}],url:du,documentation_url:dv,tutorial_url:a,short_description:dw,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]},{id:m,title:q,icon:p,children:[]}],created_at:dx,updated_at:dy,description:"UniLectin is a platform integrating information regarding non-enzymatic carbohydrate-binding proteins usually referred to as lectins with the prospect of building and refining a structural and functional classification of these proteins. It includes the reference Lectin3D database of 3D structures curated from the PDB.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=eOxOf7i6DdU",group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Ffrederique-lisacek-group\" tt-mode=\"url\"\u003EProteome Informatics group\u003C\u002Fa\u003E and supported by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" tt-mode=\"url\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E\u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" tt-mode=\"url\"\u003E.\u003C\u002Fa\u003E\u003C\u002Fp\u003E"},{id:dz,title:dA,slug:dB,pinned:e,types:[{id:c,icon:c,title:h}],url:dC,documentation_url:a,tutorial_url:a,short_description:dD,license_type:a,categories:[{id:A,title:D,icon:p,children:[]}],created_at:dE,updated_at:dF,description:"An image analysis software for liquid chromatography-mass spectrometry. MSight is a tool specifically developed for the representation of mass spectra along with data from a separation step. It provides simple ways to navigate through very large volumes of data, with the ability to display small regions for closer scrutiny.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fclinical-bioinformatics\" tt-mode=\"url\"\u003E\u003Cu\u003EClinical Bioinformatics group\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:dG,title:dH,slug:dI,pinned:e,types:[{id:c,icon:c,title:h}],url:dJ,documentation_url:dK,tutorial_url:a,short_description:dL,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dM,updated_at:dN,description:"The Sulfinator is a software tool able to predict tyrosine sulfation sites in protein sequences. It employs four different Hidden Markov Models that were built to recognise sulfated tyrosine residues located N-terminally, within sequence windows of more than 25 amino acids and C-terminally, as well as sulfated tyrosines clustered within 25 amino acid windows, respectively. All four HMMs contain the distilled information from one multiple sequence alignment.",media_url:a,group_info:ac},{id:dO,title:dP,slug:dQ,pinned:e,types:[{id:c,icon:c,title:h}],url:dR,documentation_url:dS,tutorial_url:a,short_description:dT,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:dU,updated_at:dV,description:"Cleave a protein sequence with a chosen enzyme\u002Fprotease, and computes the masses of the generated peptides. The tool also returns theoretical isoelectric point and mass values for the protein of interest. If desired, PeptideMass can return the mass of peptides known to carry post-translational modifications, and can highlight peptides whose masses may be affected by database conflicts, polymorphisms or splice variants.",media_url:a,group_info:ac},{id:dW,title:dX,slug:dY,pinned:e,types:[{id:c,icon:c,title:h}],url:dZ,documentation_url:d_,tutorial_url:a,short_description:d$,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ea,updated_at:eb,description:"Predict N-terminal myristoylation of proteins by neural networks. Myristoylator uses ensembles of neural networks, in order to learn to discriminate positive and negative sequences for N-myristoylation.",media_url:a,group_info:ac},{id:ec,title:ed,slug:ee,pinned:e,types:[{id:c,icon:c,title:h}],url:ef,documentation_url:eg,tutorial_url:a,short_description:eh,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:ei,updated_at:ej,description:"Identify peptides that result from unspecific cleavage of proteins from their experimental masses, taking into account artefactual chemical modifications, post-translational modifications (PTM) and protease autolytic cleavage.",media_url:a,group_info:ac},{id:ek,title:el,slug:em,pinned:e,types:[{id:c,icon:c,title:h}],url:en,documentation_url:eo,tutorial_url:a,short_description:ep,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:eq,updated_at:er,description:"Predict potential protein post-translational modifications (PTM) and find potential single amino acid substitutions in peptides. The experimentally measured peptide masses are compared with the theoretical peptides calculated from a specified Swiss-Prot\u002FTrEMBL entry or from a user-entered sequence, and mass differences are used to better characterise the protein of interest.",media_url:a,group_info:ac},{id:es,title:et,slug:eu,pinned:T,types:[{id:d,icon:d,title:n}],url:ev,documentation_url:av,tutorial_url:ew,short_description:ex,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]}],created_at:ey,updated_at:ez,description:"UniProtKB\u002FSwiss-Prot is the expertly curated component of UniProtKB (produced by the UniProt consortium). It contains hundreds of thousands of protein descriptions, including function, domain structure, subcellular location, post-translational modifications and functionally characterized variants.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 UniProt is one of the most widely used protein information resources in the world.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=wvrCJtJnDbo",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and UniProt partners at EMBL-EBI and PIR, and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E\u003Cp\u003EUniProt is an \u003Ca href=\"https:\u002F\u002Felixir-europe.org\u002Fplatforms\u002Fdata\u002Fcore-data-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003EELIXIR Core Data Resource\u003C\u002Fu\u003E\u003C\u002Fa\u003E and a \u003Ca href=\"https:\u002F\u002Fglobalbiodata.org\u002Fscientific-activities\u002Fglobal-core-biodata-resources\u002F\" rel=\"noopener noreferrer nofollow\"\u003EGlobal Core Biodata Resource\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:l,title:eA,slug:eB,pinned:e,types:[{id:d,icon:d,title:n}],url:eC,documentation_url:av,tutorial_url:eD,short_description:eE,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]}],created_at:W,updated_at:eF,description:"The UniProt Knowledgebase is a central hub for the collection of functional information on proteins with accurate, consistent and rich annotation. It consists of UniProtKB\u002FSwiss-Prot (expert-curated records) and UniProtKB\u002FTrEMBL (computationally annotated records).",media_url:"https:\u002F\u002Fwww.youtube.com\u002F@uniprotvideos",group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" tt-mode=\"url\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and the UniProt Consortium partners at EMBL-EBI and PIR, and supported by the \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fwww.sib.swiss\" tt-mode=\"url\"\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fa\u003E.\u003C\u002Fp\u003E\u003Cp\u003EUniProt is an \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Felixir-europe.org\u002Fplatforms\u002Fdata\u002Fcore-data-resources\" tt-mode=\"url\"\u003E\u003Cu\u003EELIXIR Core Data Resource\u003C\u002Fu\u003E\u003C\u002Fa\u003E\u003Cu\u003E \u003C\u002Fu\u003Eand a \u003Ca target=\"_blank\" rel=\"noopener noreferrer nofollow\" href=\"https:\u002F\u002Fglobalbiodata.org\u002Fscientific-activities\u002Fglobal-core-biodata-resources\u002F\" tt-mode=\"url\"\u003EGlobal Core Biodata Resource\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:eG,title:eH,slug:eI,pinned:e,types:[{id:c,icon:c,title:h}],url:eJ,documentation_url:eK,tutorial_url:a,short_description:eL,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:eM,updated_at:eN,description:"An important problem in sequence analysis is to find patterns matching sets or subsets of sequences. This tool allows the user to discover patterns conserved in sets of unaligned protein sequences. The user can specify what kind of patterns should be searched for, and how many sequences should match a pattern to be reported. The patterns are reported using PROSITE syntax.",media_url:a,group_info:ac},{id:eO,title:eP,slug:eQ,pinned:e,types:[{id:c,icon:c,title:h}],url:eR,documentation_url:eS,tutorial_url:a,short_description:eT,license_type:a,categories:[{id:f,title:j,icon:k,children:[]}],created_at:eU,updated_at:eV,description:"Scan several protein sequences or a whole genome (all ORFs) against HAMAP family profiles. Sequences that match HAMAP profiles will be annotated in the UniProtKB format by the associated annotation rules.",media_url:a,group_info:ac},{id:E,title:eW,slug:eX,pinned:e,types:[{id:d,icon:d,title:n},{id:c,icon:c,title:h}],url:eY,documentation_url:eZ,tutorial_url:a,short_description:e_,license_type:{id:r,title:an,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:f,title:j,icon:k,children:[]}],created_at:ad,updated_at:e$,description:"HAMAP is a system for the classification and annotation of protein sequences. It consists of a collection of manually curated family profiles for protein classification, and associated, manually created annotation rules that specify annotations that apply to family members. HAMAP is applied to bacterial, archaeal and eukaryotic proteins and used to annotate records in UniProtKB via UniProt's automatic annotation pipeline. \u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\nThis resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003ESwiss-Prot group\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fa,title:fb,slug:fc,pinned:e,types:[{id:d,icon:d,title:n}],url:fd,documentation_url:fe,tutorial_url:ff,short_description:fg,license_type:{id:g,title:u,link_url:v,link_label:w,created_at:b,updated_at:x},categories:[{id:f,title:j,icon:k,children:[]}],created_at:fh,updated_at:fi,description:"Use SPARQL to express queries across diverse data sources, such as UniProt and its supporting datasets as well as other databases that provide this technology. This allows powerful queries as if the queried databases were installed locally.\u003Cbr \u002F\u003E\r\n\u003Cbr \u002F\u003E\r\n馃挕 The world's largest public SPARQL endpoint with 190 billion triples.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=8tgejYIrUYQ",group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESwiss-Prot group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and UniProt partners at EMBL-EBI and PIR, and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002F\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:fj,title:fk,slug:fl,pinned:e,types:[{id:d,icon:d,title:n}],url:fm,documentation_url:fn,tutorial_url:a,short_description:fo,license_type:{id:r,title:an,link_url:ao,link_label:ap,created_at:b,updated_at:aq},categories:[{id:f,title:j,icon:k,children:[]}],created_at:fp,updated_at:fq,description:"A SPARQL endpoint using the annotation rules from the HAMAP protein classification and annotation system, which can be used to automatically generate Swiss-Prot style annotation, based on protein family membership. HAMAP rules have been translated into queries in the W3C standard SPARQL 1.1 syntax, and can be used to generate portable genome and proteome annotation pipelines, to be run without recourse to custom software.",media_url:a,group_info:"\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESwiss-Prot group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Fresearch-infrastructure\u002Fdatabase-software-tools\u002Fsib-resources\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E"},{id:r,title:fr,slug:fs,pinned:e,types:[{id:d,icon:d,title:n}],url:ft,documentation_url:fu,tutorial_url:a,short_description:fv,license_type:{id:ar,title:Z,link_url:aw,link_label:ax,created_at:ay,updated_at:az},categories:[{id:f,title:j,icon:k,children:[]}],created_at:W,updated_at:fw,description:"PROSITE consists of documentation entries describing protein domains, families and functional sites as well as associated patterns and profiles to identify them. This resource supports COVID-19 \u002F SARS-CoV-2 research.",media_url:a,group_info:fx},{id:fy,title:fz,slug:fA,pinned:e,types:[{id:c,icon:c,title:h}],url:fB,documentation_url:fC,tutorial_url:a,short_description:fD,license_type:{id:ar,title:Z,link_url:aw,link_label:ax,created_at:ay,updated_at:az},categories:[{id:f,title:j,icon:k,children:[]}],created_at:fE,updated_at:fF,description:"Scan protein sequence(s) against PROSITE, or search for hits by specific motif(s) in protein sequence database(s). ScanProsite may be used alternatively in quick scan mode or advanced scan mode.",media_url:a,group_info:fx},{id:fG,title:aA,slug:fH,pinned:e,types:[{id:d,icon:d,title:n}],url:fI,documentation_url:a,tutorial_url:a,short_description:aA,license_type:a,categories:[{id:f,title:j,icon:k,children:[]},{id:O,title:_,icon:$,children:[]}],created_at:fJ,updated_at:fK,description:"The highly polymorphic Major Histocompatibility Complex (MHC) genes are responsible for the binding and cell surface presentation of pathogen- or cancer-specific T-cell epitopes. The MHC Motif Atlas helps visualize, analyse, and compare the different binding specificities of thousands of class I and class II MHC molecules, and includes binding motifs, peptide length distributions, motifs of phosphorylated ligands, multiple specificities, or links to X-ray crystallography structures.",media_url:"https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=Oyl7x6jsroQ",group_info:"\u003Cp\u003EDeveloped by the \u003Ca target=\"_self\" rel=\"nofollow noopener noreferrer\" href=\"https:\u002F\u002Fwww.sib.swiss\u002Fdavid-gfeller-group\" tt-mode=\"url\"\u003ECancer Immune Recognition 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license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-sa\u002F4.0\u002F","CC BY-SA 4.0","2022-04-14T10:32:09.000000Z","the GNU General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fgpl-3.0.en.html","GPL 3","2020-07-16T10:56:27.000000Z","a Creative Commons Attribution-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nd\u002F4.0\u002F","CC BY-ND 4.0","2022-04-14T10:31:45.000000Z",21,"https:\u002F\u002Fwww.apache.org\u002Flicenses\u002FLICENSE-2.0","Apache License","2020-06-23T16:41:00.000000Z","https:\u002F\u002Fwww.uniprot.org\u002Fhelp\u002Ftechnical","https:\u002F\u002Fprosite.expasy.org\u002Fprosite_license.html","PROSITE license","2020-07-16T11:36:48.000000Z","2022-04-14T10:30:04.000000Z","MHC Motif Atlas","a Creative Commons Universal license","https:\u002F\u002Fcreativecommons.org\u002Fpublicdomain\u002Fzero\u002F1.0\u002F","CC0","2022-04-14T10:32:34.000000Z",20,"https:\u002F\u002Fopensource.org\u002Flicenses\u002FMIT","MIT License","2020-06-23T16:41:42.000000Z",0,"a Creative Commons Attribution-NonCommercial-NoDerivatives International license","https:\u002F\u002Fcreativecommons.org\u002Flicenses\u002Fby-nc-nd\u002F4.0\u002F","CC BY-NC-ND 4.0","2022-04-14T10:31:12.000000Z",25,"the GNU Affero General Public License","https:\u002F\u002Fwww.gnu.org\u002Flicenses\u002Fagpl-3.0.en.html","GNU AGPL","a free license for academic use. A licence is required for private companies.","http:\u002F\u002Fwww.swissdock.ch\u002Fpages\u002Ffeedback","Contact the team","2020-07-16T11:12:03.000000Z","2022-04-14T10:30:15.000000Z",609,"GlycoSiteAlign","glycositealign","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycositealign\u002F","Multiple alignment of sequences around glycosylation sites","2020-06-26T17:29:46.000000Z","2020-07-16T12:22:46.000000Z",559,"UniCarb-DB","unicarb-db","https:\u002F\u002Funicarb-db.expasy.org","Glycan structures and associated mass spectrometry data","2020-06-22T12:31:58.000000Z","2023-06-02T08:17:49.000000Z",573,"Swiss Mass Abacus","swiss-mass-abacus","https:\u002F\u002Fglycoproteome.expasy.org\u002Fswiss-mass-abacus\u002F","Intuitive calculator of peptide and glycopeptide masses","2020-06-23T18:24:50.000000Z","2020-07-16T12:41:11.000000Z",574,"SugarSketcher","sugarsketcher","https:\u002F\u002Fglycoproteome.expasy.org\u002Fsugarsketcher\u002F","Fast, intuitive, SNFG-compliant glycan structure drawing","2020-06-24T09:20:48.000000Z","2020-07-16T12:21:24.000000Z",575,"SugarBind","sugarbind","https:\u002F\u002Fsugarbind.expasy.org","https:\u002F\u002Fsugarbind.expasy.org\u002Fhelp","Pathogen Sugar-Binding Database","2020-06-24T09:25:27.000000Z","2024-08-15T14:25:38.000000Z",606,"GlyS3","glys3","https:\u002F\u002Fglyconnect.expasy.org\u002Fglycoql\u002F","Match a glycan substructure to a database of full structures","2020-06-26T17:09:08.000000Z","2024-08-15T14:56:35.000000Z",607,"Glynsight","glynsight","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002F","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglynsight\u002Fabout","Visualise and compare glycan expression profiles","2020-06-26T17:15:21.000000Z","2024-08-16T13:52:43.000000Z",608,"Glydin'","glydin","https:\u002F\u002Fglycoproteome.expasy.org\u002Fepitopes\u002F","Network representation of known glycan determinants","2020-06-26T17:19:23.000000Z","2020-07-16T12:48:56.000000Z",610,"GlyConnect","glyconnect","https:\u002F\u002Fglyconnect.expasy.org","https:\u002F\u002Fglyconnect.expasy.org\u002Fhelp","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=L9Zn-ji4RYY&t=2619s","Integrated data platform to study glycosylation","2020-06-26T17:50:15.000000Z","2024-11-26T12:11:27.000000Z",611,"GlycoDigest","glycodigest","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycodigest\u002F","In silico digestion of glycans by exoglycosidases","2020-06-26T17:54:21.000000Z","2020-07-16T12:08:34.000000Z",617,"EpitopeXtractor","epitopextractor","https:\u002F\u002Fglycoproteome.expasy.org\u002Fepextractor\u002F","Compare glycan structures to Glydin' network's collection","2020-06-26T18:32:16.000000Z","2024-07-18T13:53:15.000000Z",645,"GlycoMod","glycomod","https:\u002F\u002Fweb.expasy.org\u002Fglycomod\u002F","Possible oligosaccharide structures on proteins from masses","2020-06-30T18:28:43.000000Z","2023-09-28T07:24:17.000000Z",704,"GlyConnect Compozitor","glyconnect-compozitor","https:\u002F\u002Fglyconnect.expasy.org\u002Fcompozitor\u002F","Contextualises glycan composition sets","2021-01-21T18:53:58.000000Z","2023-03-27T07:18:38.000000Z",707,"Glyco@Expasy","glyco-expasy","https:\u002F\u002Fglycoproteome.expasy.org\u002Fglycomics-expasy\u002F","Zooming in on web-based glycoinformatics resources","2021-06-07T08:19:20.000000Z","2024-11-21T10:50:24.000000Z",705,"HMO-Glycologue","hmo-glycologue","https:\u002F\u002Fglycologue.org\u002Fm\u002F","Simulator of Human Milk Oligosaccharide synthesis","2021-01-21T19:03:24.000000Z","2024-08-21T13:51:01.000000Z",721,"GlyConnect SPARQL endpoint","glyconnect-sparql-endpoint","https:\u002F\u002Fglyconnect.expasy.org\u002Frdf","SPARQL access to GlyConnect","2022-09-16T13:52:39.000000Z","2023-10-10T12:32:47.000000Z",701,"GAG-DB","gag-db","https:\u002F\u002Fgagdb.glycopedia.eu\u002F","3D structures of glycosaminoglycans","2020-12-14T10:18:21.000000Z","2024-08-21T13:47:44.000000Z",703,"MzJava","mzjava","https:\u002F\u002Fmzjava.expasy.org\u002F","Open source Java class library to process MS fragmentation","2021-01-21T13:54:00.000000Z","2024-08-22T12:12:27.000000Z",558,"UniLectin","unilectin","https:\u002F\u002Funilectin.unige.ch\u002F","https:\u002F\u002Funilectin.unige.ch\u002Fpages\u002Fabout","Structural and functional classification of lectins","2020-06-22T12:10:25.000000Z","2024-11-26T12:17:59.000000Z",597,"MSight","msight","https:\u002F\u002Fmsight.sib.swiss\u002F","Mass Spectrometry Imager","2020-06-24T18:53:32.000000Z","2024-08-22T13:49:13.000000Z",628,"Sulfinator","sulfinator","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fsulfinator\u002Fsulfinator-doc.html","Predict tyrosine sulfation sites in protein sequences","2020-06-30T16:11:29.000000Z","2024-08-14T13:37:38.000000Z",638,"PeptideMass","peptidemass","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002F","https:\u002F\u002Fweb.expasy.org\u002Fpeptide_mass\u002Fpeptide-mass-doc.html","Theoretical protein cleavage by a given enzyme","2020-06-30T17:44:47.000000Z","2024-08-14T13:43:44.000000Z",640,"Myristoylator","myristoylator","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002F","https:\u002F\u002Fweb.expasy.org\u002Fmyristoylator\u002Fmyristoylator-doc.html","N-terminal myristoylation of proteins by neural networks","2020-06-30T17:55:49.000000Z","2024-08-14T13:46:00.000000Z",646,"FindPept","findpept","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindpept\u002Ffindpept-doc.html","Unspecific protein cleavage from experimental masses","2020-06-30T18:33:26.000000Z","2024-08-14T13:49:43.000000Z",647,"FindMod","findmod","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002F","https:\u002F\u002Fweb.expasy.org\u002Ffindmod\u002Ffindmod-doc.html","Potential PTMs and single amino acid substitutions","2020-07-01T09:34:57.000000Z","2024-08-14T13:50:47.000000Z",626,"UniProtKB\u002FSwiss-Prot","uniprotkb-swiss-prot","https:\u002F\u002Fwww.uniprot.org\u002Funiprotkb?facets=reviewed%3Atrue&query=%2A","https:\u002F\u002Fwww.youtube.com\u002Fwatch?v=JSQj_Y1xMgo","Protein knowledgebase","2020-06-30T15:41:28.000000Z","2024-11-11T14:11:35.000000Z","UniProtKB","uniprotkb","https:\u002F\u002Fwww.uniprot.org\u002F","https:\u002F\u002Fwww.youtube.com\u002Fc\u002Funiprotvideos\u002Ffeatured","Protein sequence database","2024-11-11T12:53:01.000000Z",636,"PRATT","pratt","https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002F","https:\u002F\u002Fweb.expasy.org\u002Fpratt\u002Fpratt_doc.html","Conserved patterns in a set of protein sequences","2020-06-30T17:24:54.000000Z","2024-08-14T13:42:48.000000Z",644,"HAMAP-Scan","hamap-scan","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fhamap-scan\u002Fhamap_scan_userman.html","Scanning of protein sequences against HAMAP families","2020-06-30T18:14:20.000000Z","2024-08-14T13:27:26.000000Z","HAMAP","hamap","https:\u002F\u002Fhamap.expasy.org\u002F","https:\u002F\u002Fhamap.expasy.org\u002Fweb_view_HAMAP_profiles.html","UniProtKB family classification and annotation","2024-09-12T09:31:51.000000Z",692,"UniProt SPARQL endpoint","uniprot-sparql-endpoint","https:\u002F\u002Fsparql.uniprot.org","https:\u002F\u002Fpurl.uniprot.org\u002Fhtml\u002Findex-en.html#","https:\u002F\u002Fgithub.com\u002Fsib-swiss\u002Fsparql-training\u002Ftree\u002Fmaster\u002Funiprot","SPARQL access to UniProt and related data","2020-10-27T11:07:43.000000Z","2024-11-11T15:11:26.000000Z",691,"HAMAP SPARQL endpoint","hamap-sparql-endpoint","https:\u002F\u002Fhamap.expasy.org\u002Fsparql","https:\u002F\u002Facademic.oup.com\u002Fgigascience\u002Farticle\u002F9\u002F2\u002Fgiaa003\u002F5731417","SPARQL access to the HAMAP annotation rules","2020-10-27T11:03:40.000000Z","2024-07-23T09:55:54.000000Z","PROSITE","prosite","https:\u002F\u002Fprosite.expasy.org\u002F","https:\u002F\u002Fprosite.expasy.org\u002Fprosuser.html","Protein family and domain database","2024-08-21T12:51:53.000000Z","\u003Cp\u003EDeveloped by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002Falan-bridge-group\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESwiss-Prot group\u003C\u002Fu\u003E\u003C\u002Fa\u003E and supported by the \u003Ca href=\"https:\u002F\u002Fwww.sib.swiss\u002F\" rel=\"noopener noreferrer nofollow\"\u003E\u003Cu\u003ESIB Swiss Institute of Bioinformatics\u003C\u002Fu\u003E\u003C\u002Fa\u003E.\u003C\u002Fp\u003E",671,"ScanProsite","scanprosite","https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002F","https:\u002F\u002Fprosite.expasy.org\u002Fscanprosite\u002Fscanprosite_doc.html","Protein sequences against PROSITE","2020-07-01T18:48:11.000000Z","2024-08-14T13:34:16.000000Z",723,"mhc-motif-atlas","http:\u002F\u002Fmhcmotifatlas.org\u002Fhome","2022-11-22T15:50:43.000000Z","2024-08-26T09:44:36.000000Z","pftools","https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorials","2024-03-01T14:11:56.000000Z","https:\u002F\u002Fswissmodel.expasy.org\u002F","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Fhelp","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Ftutorial","https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fhelp","rawrr","fastsimcoal"));</script><script src="/_nuxt/734f39f.js" defer></script><script src="/_nuxt/64c1a2c.js" defer></script><script src="/_nuxt/78684c8.js" defer></script><script 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