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John Metcalfe | UCSF Profiles
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text-decoration: none !important' border='0' width='9' height='9'/> <input type='hidden' id="imgonhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBiography" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9'/><input type='hidden' id="imgoffhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBiography" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' />Biography <br></div><div class='PropertyGroupItem' id='http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBiography'><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#educationalTraining" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#educationalTraining" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#educationalTraining');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#educationalTraining');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#educationalTraining" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Education and Training</div><div class='PropertyGroupData'><div id='http://vivoweb.org/ontology/core#educationalTraining'><div style="margin-top:6px" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:prns="http://profiles.catalyst.harvard.edu/ontology/prns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:vivo="http://vivoweb.org/ontology/core#"><table style="width:592px" class="collapsible education"><tbody><tr><td>University of California, San Francisco</td><td></td><td>2020</td><td>Diversity, Equity, and Inclusion Champion Training</td></tr><tr><td>University of California, Berkely</td><td>Ph.D.</td><td>2012</td><td>Division of Epidemiology</td></tr><tr><td>University of California, San Francisco</td><td>Fellowship</td><td>2009</td><td>Pulmonary and Critical Care Medicine</td></tr><tr><td>University of California, San Francisco</td><td>Residency </td><td>2006</td><td>Internal Medicine</td></tr><tr><td>Tufts University School of Medicine</td><td>M.D.</td><td>2003</td><td>School of Medicine</td></tr><tr><td>Tufts University School of Medicine</td><td>MPH</td><td>2003</td><td>Chronic Complex Emergencies</td></tr><tr><td>Humboldt State University</td><td>BS</td><td>1998</td><td>Molecular Biology</td></tr><tr><td>Michigan State University</td><td>AB</td><td>1995</td><td>Sociology</td></tr></tbody></table></div> </div></div></div><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#awardOrHonor" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#awardOrHonor" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#awardOrHonor');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#awardOrHonor');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#awardOrHonor" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Awards and Honors</div><div class='PropertyGroupData'><div id='http://vivoweb.org/ontology/core#awardOrHonor'><div class="awardsList"><table class="collapsible"><tbody><tr><td stlye="white-space:nowrap;">University of California, Berkeley</td><td class="awardStartDate">2008</td><td></td><td>Chancellor's Fellow</td></tr><tr><td stlye="white-space:nowrap;">Robert Wood Johnson Foundation</td><td class="awardStartDate">2010</td><td></td><td>Harold Amos Scholar</td></tr><tr><td stlye="white-space:nowrap;">Doris Duke Charitable Foundation</td><td class="awardStartDate">2015</td><td></td><td>Clinical Scientist Development Award</td></tr></tbody></table></div> </div></div></div></div><div class='PropertyGroup' tabindex="0" style='cursor:pointer;' onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview');" onclick="javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview');" role="region"><br><img id="propertygrouphttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9'/> <input type='hidden' id="imgonhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9'/><input type='hidden' id="imgoffhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' />Overview <br></div><div class='PropertyGroupItem' id='http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupOverview'><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#overview" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9'/><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#overview" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13)javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#overview');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#overview');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#overview" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' border='0' width='9' height='9' /> Overview</div><div class='PropertyGroupData'><div style='padding-top:6px;padding-right:6px;padding-left:6px' id='http://vivoweb.org/ontology/core#overview'>My research focuses on fundamental questions in the tracking and early identification of drug-resistant tuberculosis (DR-TB) to better target and evaluate control interventions. I have specialized training in clinical research methods, statistical prediction, repeated measures, and causal inference through doctoral work in the Division of Epidemiology, UC Berkeley. I have served as a consultant to the WHO, USAID, and PAHO for the development of regional and national TB management guidelines. Because of my commitment to work with critically underserved populations, I have been attracted to global health projects with strong programmatic relevance throughout my career. I have experience conducting prospective studies in challenging environments, including a one-year field assignment in eastern D.R. Congo, and in Zimbabwe, where we oversaw treatment of the first cohort of drug-resistant TB patients (2011), undertook the first modern characterization of DR-TB in the country (2014), carried out a pragmatic diagnostic RCT of GeneXpert MTB/RIF (2014), and consulted on national TB (2014) and DR-TB (2016) prevalence surveys.<br/><br/>Within the NIH Division of AIDS Clinical Trials Group, I lead an ACTG phase IIc trial (protocol A5362) examining the sterilizing activity of the repurposed agent clofazimine and the new rifamycin rifapentine; this trial will enroll TB patients at nine sites in seven countries. I am Industry Contact and Protocol Design Lead for molecular drug susceptibility testing for the Rapid Research for Diagnostics Development in TB Network (R2D2 TB Network). My work also focuses on determining mechanisms of M. tuberculosis clonal evolution under treatment, the longitudinal clinical significance of micro-heteroresistance, and on developing assays for non-invasive therapeutic drug monitoring. Collectively, these experiences provide distinct perspectives on keystone problems with high clinical impact, bench-to-bedside translation barriers, and scientific conduct in a variety of international settings.<br></div></div></div><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#webpage" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#webpage" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#webpage');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#webpage');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#webpage" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Websites</div><div class='PropertyGroupData'><div id='http://vivoweb.org/ontology/core#webpage'><div id="view_links_table" style="padding:10px 0px 10px 20px;"><table cellspacing="10" cellpadding="10" border="0" class="collapsible"><tbody><tr /><tr class="website-table"><td style="width:30px;"><img src="https://www.google.com/s2/favicons?domain=https://mammoth.bio/blog/2019/11/20/mammoth-interviews-john-metcalfe-md-phd-mph-associate-professor-of-medicine-ucsf" width="16'" height="16" /></td><td><a href="https://mammoth.bio/blog/2019/11/20/mammoth-interviews-john-metcalfe-md-phd-mph-associate-professor-of-medicine-ucsf">Mammoth Biosciences</a></td></tr></tbody></table></div> </div></div></div><input type='hidden' id="imgonhttp://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity');" onclick="javascript:toggleBlock('propertyitem','http://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity');" role="region"><img id="propertyitemhttp://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Global Health Equity</div><div class='PropertyGroupData'><div id='http://profiles.catalyst.harvard.edu/ontology/plugins#GlobalHealthEquity'><script type="text/javascript">GlobalHealthEquity.init('{"interests":["Tuberculosis","Chronic respiratory disease","Pandemic response & preparedness","COVID-19"],"locations":["Zimbabwe","South Africa","Belarus"],"centers":["Institute for Global Health Sciences"]}'); </script> <div class="globalhealthequity"></div> </div></div></div></div><div class='PropertyGroup' tabindex="0" style='cursor:pointer;' onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch');" onclick="javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch');" role="region"><br><img id="propertygrouphttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9'/> <input type='hidden' id="imgonhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9'/><input type='hidden' id="imgoffhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' />Research <br></div><div class='PropertyGroupItem' id='http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupResearch'><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#hasResearcherRole" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#hasResearcherRole" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#hasResearcherRole');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#hasResearcherRole');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#hasResearcherRole" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Research Activities and Funding</div><div class='PropertyGroupData'><div id='http://vivoweb.org/ontology/core#hasResearcherRole'><div class='basicInfo scroll'><table class='collapsible grants' width='590px' border='0' cellpadding='5px' cellspacing='3px'><tr><td>Handheld and population-based sequencing for rapid detection of new and repurposed drug resistance in M. tuberculosis<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=R01AI153213' target='_blank'>R01AI153213</a></span><span style='float:right;padding-left:10px'>Mar 1, 2021 - Feb 28, 2026</span><br/>Role: Principal Investigator</td></tr><tr><td>Novel methods of pharmacologic monitoring for multidrug resistant tuberculosis treatment in the setting of HIV infection (NCE Year)<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=R01AI123024' target='_blank'>R01AI123024</a></span><span style='float:right;padding-left:10px'>Jan 1, 2021 - Dec 31, 2021</span><br/>Role: Principal Investigator</td></tr><tr><td>Novel next-generation sequencing assay for monitoring multidrug resistant tuberculosis treatment in the setting of HIV infection<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=R01AI131939' target='_blank'>R01AI131939</a></span><span style='float:right;padding-left:10px'>Jan 19, 2018 - Dec 31, 2022</span><br/>Role: Principal Investigator</td></tr><tr><td>Novel methods of pharmacologic monitoring for multidrug resistant tuberculosis treatment in the setting of HIV infection<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=R01AI123024' target='_blank'>R01AI123024</a></span><span style='float:right;padding-left:10px'>Jan 7, 2016 - Dec 31, 2020</span><br/>Role: Principal Investigator</td></tr><tr><td>Training for Research Excellence and MeNtorship in Tuberculosis (TRENT)<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=D43TW009539' target='_blank'>D43TW009539</a></span><span style='float:right;padding-left:10px'>Aug 1, 2013 - Apr 30, 2023</span><br/>Role: Principal Investigator</td></tr><tr><td>Improving Early Identification of Drug Resistant Tuberculosis in HIV Prevalent Se<br/><span style='float:left;padding-right:10px'>NIH</span> <span style='float:left'><a href='http://grantome.com/search?q=K23AI094251' target='_blank'>K23AI094251</a></span><span style='float:right;padding-left:10px'>Mar 4, 2011 - Feb 29, 2016</span><br/>Role: Principal Investigator</td></tr></table></div> </div></div></div></div><div class='PropertyGroup' tabindex="0" style='cursor:pointer;' onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertygroup','http://orng.info/ontology/orng#PropertyGroupORNGApplications');" onclick="javascript:toggleBlock('propertygroup','http://orng.info/ontology/orng#PropertyGroupORNGApplications');" role="region"><br><img id="propertygrouphttp://orng.info/ontology/orng#PropertyGroupORNGApplications" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9'/> <input type='hidden' id="imgonhttp://orng.info/ontology/orng#PropertyGroupORNGApplications" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9'/><input type='hidden' id="imgoffhttp://orng.info/ontology/orng#PropertyGroupORNGApplications" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' />ORNG Applications <br></div><div class='PropertyGroupItem' id='http://orng.info/ontology/orng#PropertyGroupORNGApplications'><input type='hidden' id="imgonhttp://orng.info/ontology/orng#hasClinicalTrials" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://orng.info/ontology/orng#hasClinicalTrials" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://orng.info/ontology/orng#hasClinicalTrials');" onclick="javascript:toggleBlock('propertyitem','http://orng.info/ontology/orng#hasClinicalTrials');" role="region"><img id="propertyitemhttp://orng.info/ontology/orng#hasClinicalTrials" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Clinical Trials</div><div class='PropertyGroupData'><div id='http://orng.info/ontology/orng#hasClinicalTrials'><div id='gadgets-ontology-121' class='gadgets-gadget-parent'></div> </div></div></div></div><div class='PropertyGroup' tabindex="0" style='cursor:pointer;' onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic');" onclick="javascript:toggleBlock('propertygroup','http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic');" role="region"><br><img id="propertygrouphttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9'/> <input type='hidden' id="imgonhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9'/><input type='hidden' id="imgoffhttp://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif' alt='Expand' />Bibliographic <br></div><div class='PropertyGroupItem' id='http://profiles.catalyst.harvard.edu/ontology/prns#PropertyGroupBibliographic'><input type='hidden' id="imgonhttp://vivoweb.org/ontology/core#authorInAuthorship" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' width='9' height='9' /><input type='hidden' id="imgoffhttp://vivoweb.org/ontology/core#authorInAuthorship" value='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/plusSign.gif'alt='Expand' /><div><div class='PropertyItemHeader' style='cursor:pointer;' tabindex="0" onkeypress="if (event.keyCode == 13) javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#authorInAuthorship');" onclick="javascript:toggleBlock('propertyitem','http://vivoweb.org/ontology/core#authorInAuthorship');" role="region"><img id="propertyitemhttp://vivoweb.org/ontology/core#authorInAuthorship" src='https://profiles.ucsf.edu/Profile/Modules/PropertyList/images/minusSign.gif' alt='Collapse' style='border: none; text-decoration: none !important' border='0' width='9' height='9' /> Publications</div><div class='PropertyGroupData'><div id='http://vivoweb.org/ontology/core#authorInAuthorship'> <div class='publicationList'> <div id="ctl01_divPubHeaderText" style="font-weight: bold; color: #888; padding: 5px 0px;"> Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can <a href='https://profiles.ucsf.edu/login/default.aspx?pin=send&method=login&edit=true'>login</a> to make corrections and additions, or <a id="ctl01_Contact" href="mailto:profiles@ucsf.edu">contact us for help</a>. to make corrections and additions. </div> <div class="anchor-tab" id="divDisplayType"> <a class='selected' tabindex="0" id="aNewest">Newest</a> | <a tabindex="0" id="aOldest">Oldest</a> | <a tabindex="0" id="aMostCited">Most Cited</a> | <a tabindex="0" id="aMostDiscussed">Most Discussed</a> | <a tabindex="0" id="aTimeline" class="link-visualization">Timeline</a> | <a tabindex="0" id="aFieldSummary" class="link-visualization">Field Summary</a> | <a tabindex="0" id="aPlainText">Plain Text</a> </div> <details id="divPubListDetails" class="details-text"> <summary><i>Altmetrics Details</i></summary> <span class="details-text-highlight">PMC Citations</span> indicate the number of times the publication was cited by articles in PubMed Central, and the <span class="details-text-highlight">Altmetric</span> score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) <span class="details-text-highlight">Fields</span> are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. <span class="details-text-highlight">Translation</span> tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications. </details> <div id="divPubList"> <div id="publicationListAll" class="publications"> <ol> <li id="ctl01_rpPublication_ctl01_liPublication" data-FieldBF8230="1" data-FieldBE30BF="1" data-citations="2" data-pmid="38443359" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl01_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl01_lblPublication">Frequency, kinetics and determinants of viable SARS-CoV-2 in bioaerosols from ambulatory COVID-19 patients infected with the Beta, Delta or Omicron variants. Nat Commun. 2024 Mar 05; 15(1):2003.</span> <span id="ctl01_rpPublication_ctl01_lblPublicationIDs">Jaumdally S, Tomasicchio M, Pooran A, Esmail A, Kotze A, Meier S, Wilson L, Oelofse S, van der Merwe C, Roomaney A, Davids M, Suliman T, Joseph R, Perumal T, Scott A, Shaw M, Preiser W, Williamson C, Goga A, Mayne E, Gray G, Moore P, Sigal A, Limberis J, <b>Metcalfe J</b>, Dheda K. PMID: 38443359; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10914788' target='_blank'>PMC10914788</a>.</span> </div> <div id="ctl01_rpPublication_ctl01_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/38443359 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/38443359/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">2</span></a><span id='spnHideOnNoAltmetric38443359'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='38443359'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF8230;' data-color="#BF8230" OnClick="toggleFilter('data-FieldBF8230')">Bio<span class='tooltiptext' style='background-color:#BF8230;'> Biology</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl02_liPublication" data-pmid="38233832" data-citations="1" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-Field49BF30="1"> <div> <span id="ctl01_rpPublication_ctl02_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl02_lblPublication">Household air pollution and risk of pulmonary tuberculosis in HIV-Infected adults. Environ Health. 2024 Jan 17; 23(1):6.</span> <span id="ctl01_rpPublication_ctl02_lblPublicationIDs">Katoto PDMC, Bihehe D, Brand A, Mushi R, Kusinza A, Alwood BW, van Zyl-Smit RN, Tamuzi JL, Sam-Agudu NA, Yotebieng M, <b>Metcalfe J</b>, Theron G, Godri Pollitt KJ, Lesosky M, Vanoirbeek J, Mortimer K, Nawrot T, Nemery B, Nachega JB. PMID: 38233832; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10792790' target='_blank'>PMC10792790</a>.</span> </div> <div id="ctl01_rpPublication_ctl02_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/38233832 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/38233832/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">1</span></a><span id='spnHideOnNoAltmetric38233832'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='38233832'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #49BF30;' data-color="#49BF30" OnClick="toggleFilter('data-Field49BF30')">Env<span class='tooltiptext' style='background-color:#49BF30;'> Environmental Health</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl03_liPublication" data-pmid="38082220" data-citations="1" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field95BF30="1"> <div> <span id="ctl01_rpPublication_ctl03_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl03_lblPublication">primerJinn: a tool for rationally designing multiplex PCR primer sets for amplicon sequencing and performing in silico PCR. BMC Bioinformatics. 2023 Dec 12; 24(1):468.</span> <span id="ctl01_rpPublication_ctl03_lblPublicationIDs"><a href="https://profiles.ucsf.edu/jason.limberis">Limberis JD</a>, <b>Metcalfe JZ</b>. PMID: 38082220; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10714587' target='_blank'>PMC10714587</a>.</span> </div> <div id="ctl01_rpPublication_ctl03_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/38082220 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/38082220/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">1</span></a><span id='spnHideOnNoAltmetric38082220'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='38082220'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #95BF30;' data-color="#95BF30" OnClick="toggleFilter('data-Field95BF30')">Com<span class='tooltiptext' style='background-color:#95BF30;'> Computational Biology</span></a></div> Translation:<a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl04_liPublication" data-Field3039BF="1" data-FieldBF6E30="1" data-citations="9" data-pmid="37931638" data-Field30BCBF="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-FieldBF304B="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl04_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl04_lblPublication">Bedaquiline resistance in patients with drug-resistant tuberculosis in Cape Town, South Africa: a retrospective longitudinal cohort study. Lancet Microbe. 2023 12; 4(12):e972-e982.</span> <span id="ctl01_rpPublication_ctl04_lblPublicationIDs">Derendinger B, Dippenaar A, de Vos M, Huo S, Alberts R, Tadokera R, <a href="https://profiles.ucsf.edu/jason.limberis">Limberis J</a>, Sirgel F, Dolby T, Spies C, Reuter A, Folkerts M, Allender C, Lemmer D, Van Rie A, Gagneux S, Rigouts L, Te Riele J, Dheda K, Engelthaler DM, Warren R, <b>Metcalfe J</b>, Cox H, Theron G. PMID: 37931638; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10842724' target='_blank'>PMC10842724</a>.</span> </div> <div id="ctl01_rpPublication_ctl04_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/37931638 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/37931638/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">9</span></a><span id='spnHideOnNoAltmetric37931638'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='37931638'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF6E30;' data-color="#BF6E30" OnClick="toggleFilter('data-FieldBF6E30')">Bac<span class='tooltiptext' style='background-color:#BF6E30;'> Bacteriology</span></a><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a><a class='publication-filter' style='border:1px solid #3039BF;' data-color="#3039BF" OnClick="toggleFilter('data-Field3039BF')">Par<span class='tooltiptext' style='background-color:#3039BF;'> Parasitology</span></a><a class='publication-filter' style='border:1px solid #BF304B;' data-color="#BF304B" OnClick="toggleFilter('data-FieldBF304B')">Vir<span class='tooltiptext' style='background-color:#BF304B;'> Virology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl05_liPublication" data-pmid="37280079" data-citations="2" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl05_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl05_lblPublication">Time to Extubation Among ARDS Subjects With and Without COVID-19 Pneumonia. Respir Care. 2023 10; 68(10):1340-1346.</span> <span id="ctl01_rpPublication_ctl05_lblPublicationIDs">Burns GD, Phillips JS, Kallet RH, <a href="https://profiles.ucsf.edu/david.glidden">Glidden DV</a>, <a href="https://profiles.ucsf.edu/carolyn.hendrickson">Hendrickson CM</a>, <b>Metcalfe JZ</b>. PMID: 37280079; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10506654' target='_blank'>PMC10506654</a>.</span> </div> <div id="ctl01_rpPublication_ctl05_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/37280079 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/37280079/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">2</span></a><span id='spnHideOnNoAltmetric37280079'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='37280079'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl06_liPublication" data-pmid="36877083" data-citations="1" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BCBF="1"> <div> <span id="ctl01_rpPublication_ctl06_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl06_lblPublication">Circularization of rv0678 for Genotypic Bedaquiline Resistance Testing of Mycobacterium tuberculosis. Microbiol Spectr. 2023 Mar 06; e0412722.</span> <span id="ctl01_rpPublication_ctl06_lblPublicationIDs"><a href="https://profiles.ucsf.edu/jason.limberis">Limberis JD</a>, Nalyvayko A, <a href="https://profiles.ucsf.edu/joel.ernst">Ernst JD</a>, <b>Metcalfe JZ</b>. PMID: 36877083; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10100719' target='_blank'>PMC10100719</a>.</span> </div> <div id="ctl01_rpPublication_ctl06_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/36877083 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/36877083/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">1</span></a><span id='spnHideOnNoAltmetric36877083'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='36877083'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a></div> </div> </li> <li id="ctl01_rpPublication_ctl07_liPublication" data-pmid="36869170" data-citations="6" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field4230BF="1"> <div> <span id="ctl01_rpPublication_ctl07_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl07_lblPublication">Alternative Methods for Therapeutic Drug Monitoring and Dose Adjustment of Tuberculosis Treatment in Clinical Settings: A Systematic Review. Clin Pharmacokinet. 2023 03; 62(3):375-398.</span> <span id="ctl01_rpPublication_ctl07_lblPublicationIDs">Rao PS, Modi N, Nguyen NT, Vu DH, Xie YL, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, <b>Metcalfe J</b>, Heysell SK, Alffenaar JC. PMID: 36869170; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC10042915' target='_blank'>PMC10042915</a>.</span> </div> <div id="ctl01_rpPublication_ctl07_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/36869170 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/36869170/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric36869170'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='36869170'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #4230BF;' data-color="#4230BF" OnClick="toggleFilter('data-Field4230BF')">Pha<span class='tooltiptext' style='background-color:#4230BF;'> Pharmacology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl08_liPublication" data-Field3039BF="1" data-FieldBF6E30="1" data-citations="94" data-pmid="35373160" data-Field30BCBF="1" data-TranslationClinicalTrial="0" data-TranslationHumans="0" data-FieldBF304B="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl08_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl08_lblPublication">The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: A genotypic analysis. Lancet Microbe. 2022 04; 3(4):e265-e273.</span> <span id="ctl01_rpPublication_ctl08_lblPublicationIDs">Walker TM, Miotto P, Köser CU, Fowler PW, Knaggs J, Iqbal Z, Hunt M, Chindelevitch L, Farhat M, Cirillo DM, Comas I, Posey J, Omar SV, Peto TE, Suresh A, Uplekar S, Laurent S, <a href="https://profiles.ucsd.edu/rebecca.colman">Colman RE</a>, Nathanson CM, Zignol M, Walker AS, CRyPTIC Consortium, Seq&Treat Consortium, Crook DW, Ismail N, <a href="https://profiles.ucsd.edu/timothy.rodwell">Rodwell TC</a>. PMID: 35373160; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC7612554' target='_blank'>PMC7612554</a>.</span> </div> <div id="ctl01_rpPublication_ctl08_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/35373160 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/35373160/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">94</span></a><span id='spnHideOnNoAltmetric35373160'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='35373160'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF6E30;' data-color="#BF6E30" OnClick="toggleFilter('data-FieldBF6E30')">Bac<span class='tooltiptext' style='background-color:#BF6E30;'> Bacteriology</span></a><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a><a class='publication-filter' style='border:1px solid #3039BF;' data-color="#3039BF" OnClick="toggleFilter('data-Field3039BF')">Par<span class='tooltiptext' style='background-color:#3039BF;'> Parasitology</span></a><a class='publication-filter' style='border:1px solid #BF304B;' data-color="#BF304B" OnClick="toggleFilter('data-FieldBF304B')">Vir<span class='tooltiptext' style='background-color:#BF304B;'> Virology</span></a></div> Translation:<a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl09_liPublication" data-pmid="35108607" data-citations="2" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30AEBF="1"> <div> <span id="ctl01_rpPublication_ctl09_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl09_lblPublication">Frequent Suboptimal Thermocycler Ramp Rate Usage Negatively Impacts GenoType MTBDRsl VER 2.0 Performance for Second-Line Drug-Resistant Tuberculosis Diagnosis. J Mol Diagn. 2022 05; 24(5):494-502.</span> <span id="ctl01_rpPublication_ctl09_lblPublicationIDs">Derendinger B, de Vos M, Pillay S, Venter R, <b>Metcalfe J</b>, Ghebrekristos Y, Minnies S, Dolby T, Beylis N, Warren R, Theron G. PMID: 35108607; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC9127458' target='_blank'>PMC9127458</a>.</span> </div> <div id="ctl01_rpPublication_ctl09_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/35108607 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/35108607/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">2</span></a><span id='spnHideOnNoAltmetric35108607'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='35108607'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30AEBF;' data-color="#30AEBF" OnClick="toggleFilter('data-Field30AEBF')">Mol<span class='tooltiptext' style='background-color:#30AEBF;'> Molecular Biology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl10_liPublication" data-pmid="34969430" data-citations="0" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl10_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl10_lblPublication">TB prevalence in Zimbabwe: a national cross-sectional survey, 2014. Int J Tuberc Lung Dis. 2022 Jan 01; 26(1):57-64.</span> <span id="ctl01_rpPublication_ctl10_lblPublicationIDs">Chipinduro M, Timire C, Chirenda J, Matambo R, Munemo E, Makamure B, Nhidza AF, Tinago W, Chikwasha V, Ngwenya M, Mutsvangwa J, <b>Metcalfe JZ</b>, Sandy C. PMID: 34969430; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8895472' target='_blank'>PMC8895472</a>.</span> </div> <div id="ctl01_rpPublication_ctl10_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/34969430 target='_blank'>PubMed</a><span id='spnHideOnNoAltmetric34969430'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='34969430'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl11_liPublication" data-pmid="34757831" data-citations="4" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BCBF="1"> <div> <span id="ctl01_rpPublication_ctl11_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl11_lblPublication">Comparative Performance of Genomic Methods for the Detection of Pyrazinamide Resistance and Heteroresistance in Mycobacterium tuberculosis. J Clin Microbiol. 2022 01 19; 60(1):e0190721.</span> <span id="ctl01_rpPublication_ctl11_lblPublicationIDs">Whitfield MG, Engelthaler DM, Allender C, Folkerts M, Heupink TH, <a href="https://profiles.ucsf.edu/jason.limberis">Limberis J</a>, Warren RM, Van Rie A, <b>Metcalfe JZ</b>. PMID: 34757831; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8769725' target='_blank'>PMC8769725</a>.</span> </div> <div id="ctl01_rpPublication_ctl11_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/34757831 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/34757831/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">4</span></a><span id='spnHideOnNoAltmetric34757831'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='34757831'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl12_liPublication" data-Field3039BF="1" data-FieldBF6E30="1" data-citations="24" data-pmid="34796339" data-Field30BCBF="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-FieldBF304B="1" data-TranslationPublicHealth="0" data-TranslationAnimals="1" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl12_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl12_lblPublication">Genetic variants and their association with phenotypic resistance to bedaquiline in Mycobacterium tuberculosis: a systematic review and individual isolate data analysis. Lancet Microbe. 2021 11; 2(11):e604-e616.</span> <span id="ctl01_rpPublication_ctl12_lblPublicationIDs">Ismail N, Rivière E, <a href="https://profiles.ucsf.edu/jason.limberis">Limberis J</a>, Huo S, <b>Metcalfe JZ</b>, Warren RM, Van Rie A. PMID: 34796339; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8597953' target='_blank'>PMC8597953</a>.</span> </div> <div id="ctl01_rpPublication_ctl12_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/34796339 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/34796339/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">24</span></a><span id='spnHideOnNoAltmetric34796339'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='34796339'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF6E30;' data-color="#BF6E30" OnClick="toggleFilter('data-FieldBF6E30')">Bac<span class='tooltiptext' style='background-color:#BF6E30;'> Bacteriology</span></a><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a><a class='publication-filter' style='border:1px solid #3039BF;' data-color="#3039BF" OnClick="toggleFilter('data-Field3039BF')">Par<span class='tooltiptext' style='background-color:#3039BF;'> Parasitology</span></a><a class='publication-filter' style='border:1px solid #BF304B;' data-color="#BF304B" OnClick="toggleFilter('data-FieldBF304B')">Vir<span class='tooltiptext' style='background-color:#BF304B;'> Virology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-animals' data-color='#33AA33' OnClick="toggleFilter('data-TranslationAnimals')">Animals</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl13_liPublication" data-Field9530BF="1" data-citations="19" data-FieldBF3067="1" data-pmid="34192392" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl13_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl13_lblPublication">Catastrophic costs among tuberculosis-affected households in Zimbabwe: A national health facility-based survey. Trop Med Int Health. 2021 10; 26(10):1248-1255.</span> <span id="ctl01_rpPublication_ctl13_lblPublicationIDs">Timire C, Ngwenya M, Chirenda J, <b>Metcalfe JZ</b>, Kranzer K, Pedrazzoli D, Takarinda KC, Nguhiu P, Madzingaidzo G, Ndlovu K, Mapuranga T, Cornell M, Sandy C. PMID: 34192392; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8519355' target='_blank'>PMC8519355</a>.</span> </div> <div id="ctl01_rpPublication_ctl13_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/34192392 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/34192392/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">19</span></a><span id='spnHideOnNoAltmetric34192392'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='34192392'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9530BF;' data-color="#9530BF" OnClick="toggleFilter('data-Field9530BF')">Pub<span class='tooltiptext' style='background-color:#9530BF;'> Public Health</span></a><a class='publication-filter' style='border:1px solid #BF3067;' data-color="#BF3067" OnClick="toggleFilter('data-FieldBF3067')">Tro<span class='tooltiptext' style='background-color:#BF3067;'> Tropical Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl14_liPublication" data-doi="10.1016/s2666-5247(21)00175-0" data-pmid="-29974" data-citations="-1" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0"> <div> <span id="ctl01_rpPublication_ctl14_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl14_lblPublication">Genetic variants and their association with phenotypic resistance to bedaquiline in Mycobacterium tuberculosis: a systematic review and individual isolate data analysis. The Lancet Microbe. 2021 Aug 1.</span> <span id="ctl01_rpPublication_ctl14_lblPublicationIDs">Ismail IN, Rivière RE, Limberis LJ, Huo HS, <b>Metcalfe MJ</b>, Warren WR, Van Rie VA. .</span> </div> <div id="ctl01_rpPublication_ctl14_divArticleMetrics" class="article-metrics"> View in: <a href=http://dx.doi.org/10.1016/s2666-5247(21)00175-0 target='_blank'>Publisher Site</a><span id='spnHideOnNoAltmetric10.1016/s2666-5247(21)00175-0'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-doi='10.1016/s2666-5247(21)00175-0'></span></span> </div> </li> <li id="ctl01_rpPublication_ctl15_liPublication" data-FieldBE30BF="1" data-citations="6" data-pmid="34270593" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl15_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl15_lblPublication">Health care seeking patterns of rifampicin-resistant tuberculosis patients in Harare, Zimbabwe: A prospective cohort study. PLoS One. 2021; 16(7):e0254204.</span> <span id="ctl01_rpPublication_ctl15_lblPublicationIDs">Tadokera R, Huo S, Theron G, Timire C, Manyau-Makumbirofa S, <b>Metcalfe JZ</b>. PMID: 34270593; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8284678' target='_blank'>PMC8284678</a>.</span> </div> <div id="ctl01_rpPublication_ctl15_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/34270593 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/34270593/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric34270593'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='34270593'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl16_liPublication" data-pmid="32590841" data-citations="5" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl16_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl16_lblPublication">Xpert Mycobacterium tuberculosis/Rifampicin-Detected Rifampicin Resistance is a Suboptimal Surrogate for Multidrug-resistant Tuberculosis in Eastern Democratic Republic of the Congo: Diagnostic and Clinical Implications. Clin Infect Dis. 2021 07 15; 73(2):e362-e370.</span> <span id="ctl01_rpPublication_ctl16_lblPublicationIDs">Bisimwa BC, Nachega JB, Warren RM, Theron G, <b>Metcalfe JZ</b>, Shah M, Diacon AH, Sam-Agudu NA, Yotebieng M, Bulabula ANH, Katoto PDMC, Chirambiza JP, Nyota R, Birembano FM, Musafiri EM, Byadunia S, Bahizire E, Kaswa MK, Callens S, Kashongwe ZM. PMID: 32590841; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8282324' target='_blank'>PMC8282324</a>.</span> </div> <div id="ctl01_rpPublication_ctl16_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/32590841 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/32590841/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">5</span></a><span id='spnHideOnNoAltmetric32590841'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='32590841'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl17_liPublication" data-pmid="33482745" data-citations="3" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl17_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl17_lblPublication">Diagnostic accuracy of a liquid chromatography-tandem mass spectrometry assay in small hair samples for rifampin-resistant tuberculosis drug concentrations in a routine care setting. BMC Infect Dis. 2021 Jan 22; 21(1):99.</span> <span id="ctl01_rpPublication_ctl17_lblPublicationIDs"><b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, Esmail A, Reckers A, Aguilar D, Wen A, Huo S, Muyindike WR, <a href="https://profiles.ucsf.edu/judith.hahn">Hahn JA</a>, Dheda K, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>. PMID: 33482745; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC7821664' target='_blank'>PMC7821664</a>.</span> </div> <div id="ctl01_rpPublication_ctl17_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/33482745 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/33482745/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">3</span></a><span id='spnHideOnNoAltmetric33482745'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='33482745'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl18_liPublication" data-FieldBF8930="1" data-citations="3" data-FieldBEBF30="1" data-pmid="33713954" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl18_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl18_lblPublication">Development and validation of a liquid chromatography-tandem mass spectrometry method for quantifying delamanid and its metabolite in small hair samples. J Chromatogr B Analyt Technol Biomed Life Sci. 2021 Apr 15; 1169:122467.</span> <span id="ctl01_rpPublication_ctl18_lblPublicationIDs">Reckers A, Huo S, Esmail A, Dheda K, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>. PMID: 33713954; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC7987786' target='_blank'>PMC7987786</a>.</span> </div> <div id="ctl01_rpPublication_ctl18_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/33713954 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/33713954/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">3</span></a><span id='spnHideOnNoAltmetric33713954'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='33713954'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF8930;' data-color="#BF8930" OnClick="toggleFilter('data-FieldBF8930')">Bio<span class='tooltiptext' style='background-color:#BF8930;'> Biomedical Engineering</span></a><a class='publication-filter' style='border:1px solid #BEBF30;' data-color="#BEBF30" OnClick="toggleFilter('data-FieldBEBF30')">Che<span class='tooltiptext' style='background-color:#BEBF30;'> Chemistry Techniques</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl19_liPublication" data-pmid="32718395" data-citations="5" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl19_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl19_lblPublication">Treatment success, but living with the consequences of post-tuberculosis sequelae. Int J Tuberc Lung Dis. 2020 07 01; 24(7):657-658.</span> <span id="ctl01_rpPublication_ctl19_lblPublicationIDs">Tadyanemhandu C, Chirenda J, Garvey C, <b>Metcalfe J</b>. PMID: 32718395; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC9172971' target='_blank'>PMC9172971</a>.</span> </div> <div id="ctl01_rpPublication_ctl19_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/32718395 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/32718395/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">5</span></a><span id='spnHideOnNoAltmetric32718395'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='32718395'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl20_liPublication" data-FieldBF8230="1" data-citations="2" data-pmid="32510502" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl20_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl20_lblPublication">Validated LC-MS/MS Panel for Quantifying 11 Drug-Resistant TB Medications in Small Hair Samples. J Vis Exp. 2020 05 19; (159).</span> <span id="ctl01_rpPublication_ctl20_lblPublicationIDs">Reckers A, Wen A, Aguilar D, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>. PMID: 32510502.</span> </div> <div id="ctl01_rpPublication_ctl20_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/32510502 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/32510502/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">2</span></a><span id='spnHideOnNoAltmetric32510502'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='32510502'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF8230;' data-color="#BF8230" OnClick="toggleFilter('data-FieldBF8230')">Bio<span class='tooltiptext' style='background-color:#BF8230;'> Biology</span></a><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl21_liPublication" data-pmid="32289564" data-citations="3" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl21_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl21_lblPublication">Presentation and outcome of suspected sepsis in a high-HIV burden, high antiretroviral coverage setting. Int J Infect Dis. 2020 Jul; 96:276-283.</span> <span id="ctl01_rpPublication_ctl21_lblPublicationIDs">Chaka W, <a href="https://profiles.ucsf.edu/christopher.berger">Berger C</a>, Huo S, Robertson V, Tachiona C, Magwenzi M, Magombei T, Mpamhanga C, Katzenstein D, <b>Metcalfe J</b>. PMID: 32289564; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC8040698' target='_blank'>PMC8040698</a>.</span> </div> <div id="ctl01_rpPublication_ctl21_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/32289564 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/32289564/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">3</span></a><span id='spnHideOnNoAltmetric32289564'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='32289564'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl22_liPublication" data-pmid="31932382" data-citations="1" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldBF5930="1"> <div> <span id="ctl01_rpPublication_ctl22_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl22_lblPublication">Correlation of Linezolid Hair Concentrations with Plasma Exposure in Patients with Drug-Resistant Tuberculosis. Antimicrob Agents Chemother. 2020 02 21; 64(3).</span> <span id="ctl01_rpPublication_ctl22_lblPublicationIDs">Wasserman S, Huo S, Ky K, Malig YN, Esmail A, Dheda K, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Maartens G, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <b>Metcalfe J</b>. PMID: 31932382; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC7038252' target='_blank'>PMC7038252</a>.</span> </div> <div id="ctl01_rpPublication_ctl22_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31932382 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31932382/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">1</span></a><span id='spnHideOnNoAltmetric31932382'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31932382'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF5930;' data-color="#BF5930" OnClick="toggleFilter('data-FieldBF5930')">Ant<span class='tooltiptext' style='background-color:#BF5930;'> Anti-Infective Agents</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl23_liPublication" data-citations="10" data-Field30AEBF="1" data-pmid="31774334" data-FieldBFB330="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl23_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl23_lblPublication">Minority Mycobacterium tuberculosis Genotypic Populations as an Indicator of Subsequent Phenotypic Resistance. Am J Respir Cell Mol Biol. 2019 12; 61(6):789-791.</span> <span id="ctl01_rpPublication_ctl23_lblPublicationIDs">Engelthaler DM, Streicher EM, Kelley EJ, Allender CJ, Wiggins K, Jimenez D, Lemmer D, <a href="https://profiles.ucsf.edu/eric.vittinghoff">Vittinghoff E</a>, Theron G, Sirgel FA, Warren RM, <b>Metcalfe JZ</b>. PMID: 31774334; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6890401' target='_blank'>PMC6890401</a>.</span> </div> <div id="ctl01_rpPublication_ctl23_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31774334 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31774334/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">10</span></a><span id='spnHideOnNoAltmetric31774334'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31774334'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BFB330;' data-color="#BFB330" OnClick="toggleFilter('data-FieldBFB330')">Cel<span class='tooltiptext' style='background-color:#BFB330;'> Cell Biology</span></a><a class='publication-filter' style='border:1px solid #30AEBF;' data-color="#30AEBF" OnClick="toggleFilter('data-Field30AEBF')">Mol<span class='tooltiptext' style='background-color:#30AEBF;'> Molecular Biology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl24_liPublication" data-pmid="31627778" data-citations="0" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl24_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl24_lblPublication">More should be done now for patients with TB-associated chronic lung disease. Int J Tuberc Lung Dis. 2019 10 01; 23(10):1122-1123.</span> <span id="ctl01_rpPublication_ctl24_lblPublicationIDs">Tadyanemhandu C, Garvey C, Chin A, <b>Metcalfe J</b>. PMID: 31627778; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6849379' target='_blank'>PMC6849379</a>.</span> </div> <div id="ctl01_rpPublication_ctl24_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31627778 target='_blank'>PubMed</a><span id='spnHideOnNoAltmetric31627778'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31627778'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl25_liPublication" data-pmid="31357057" data-citations="12" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl25_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl25_lblPublication">Prevalence of drug-resistant tuberculosis in Zimbabwe: A health facility-based cross-sectional survey. Int J Infect Dis. 2019 Oct; 87:119-125.</span> <span id="ctl01_rpPublication_ctl25_lblPublicationIDs">Timire C, <b>Metcalfe JZ</b>, Chirenda J, Scholten JN, Manyame-Murwira B, Ngwenya M, Matambo R, Charambira K, Mutunzi H, Kalisvaart N, Sandy C. PMID: 31357057; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC9586843' target='_blank'>PMC9586843</a>.</span> </div> <div id="ctl01_rpPublication_ctl25_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31357057 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31357057/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">12</span></a><span id='spnHideOnNoAltmetric31357057'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31357057'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl26_liPublication" data-FieldBF8930="1" data-citations="6" data-FieldBEBF30="1" data-pmid="31369929" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl26_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl26_lblPublication">Simultaneous analysis of 11 medications for drug resistant TB in small hair samples to quantify adherence and exposure using a validated LC-MS/MS panel. J Chromatogr B Analyt Technol Biomed Life Sci. 2019 09 01; 1125:121729.</span> <span id="ctl01_rpPublication_ctl26_lblPublicationIDs"><a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Wen A, Aguilar D, Shum J, Reckers A, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <b>Metcalfe J</b>. PMID: 31369929; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6711392' target='_blank'>PMC6711392</a>.</span> </div> <div id="ctl01_rpPublication_ctl26_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31369929 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31369929/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric31369929'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31369929'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF8930;' data-color="#BF8930" OnClick="toggleFilter('data-FieldBF8930')">Bio<span class='tooltiptext' style='background-color:#BF8930;'> Biomedical Engineering</span></a><a class='publication-filter' style='border:1px solid #BEBF30;' data-color="#BEBF30" OnClick="toggleFilter('data-FieldBEBF30')">Che<span class='tooltiptext' style='background-color:#BEBF30;'> Chemistry Techniques</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl27_liPublication" data-pmid="31097281" data-citations="23" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9530BF="1"> <div> <span id="ctl01_rpPublication_ctl27_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl27_lblPublication">Point of care Xpert MTB/RIF versus smear microscopy for tuberculosis diagnosis in southern African primary care clinics: a multicentre economic evaluation. Lancet Glob Health. 2019 06; 7(6):e798-e807.</span> <span id="ctl01_rpPublication_ctl27_lblPublicationIDs">Pooran A, Theron G, Zijenah L, Chanda D, Clowes P, Mwenge L, Mutenherwa F, Lecesse P, <b>Metcalfe J</b>, Sohn H, Hoelscher M, Pym A, Peter J, Dowdy D, Dheda K. PMID: 31097281; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC7197817' target='_blank'>PMC7197817</a>.</span> </div> <div id="ctl01_rpPublication_ctl27_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31097281 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31097281/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">23</span></a><span id='spnHideOnNoAltmetric31097281'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31097281'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9530BF;' data-color="#9530BF" OnClick="toggleFilter('data-Field9530BF')">Pub<span class='tooltiptext' style='background-color:#9530BF;'> Public Health</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl28_liPublication" data-pmid="31141643" data-citations="31" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BFB5="1"> <div> <span id="ctl01_rpPublication_ctl28_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl28_lblPublication">Bedaquiline Microheteroresistance after Cessation of Tuberculosis Treatment. N Engl J Med. 2019 05 30; 380(22):2178-2180.</span> <span id="ctl01_rpPublication_ctl28_lblPublicationIDs">de Vos M, Ley SD, Wiggins KB, Derendinger B, Dippenaar A, Grobbelaar M, Reuter A, Dolby T, Burns S, Schito M, Engelthaler DM, <b>Metcalfe J</b>, Theron G, van Rie A, Posey J, Warren R, Cox H. PMID: 31141643; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6518951' target='_blank'>PMC6518951</a>.</span> </div> <div id="ctl01_rpPublication_ctl28_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31141643 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31141643/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">31</span></a><span id='spnHideOnNoAltmetric31141643'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31141643'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl29_liPublication" data-pmid="31041318" data-citations="8" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0"> <div> <span id="ctl01_rpPublication_ctl29_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl29_lblPublication">Association of anti-tuberculosis drug concentrations in hair and treatment outcomes in MDR- and XDR-TB. ERJ Open Res. 2019 Apr; 5(2).</span> <span id="ctl01_rpPublication_ctl29_lblPublicationIDs"><b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Esmail A, Dheda K, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>. PMID: 31041318; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6484095' target='_blank'>PMC6484095</a>.</span> </div> <div id="ctl01_rpPublication_ctl29_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/31041318 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/31041318/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">8</span></a><span id='spnHideOnNoAltmetric31041318'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='31041318'></span></span> </div> </li> <li id="ctl01_rpPublication_ctl30_liPublication" data-pmid="30808453" data-citations="19" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl30_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl30_lblPublication">Chronic lung disease in adult recurrent tuberculosis survivors in Zimbabwe: a cohort study. Int J Tuberc Lung Dis. 2019 02 01; 23(2):203-211.</span> <span id="ctl01_rpPublication_ctl30_lblPublicationIDs">Chin AT, Rylance J, Makumbirofa S, <a href="https://profiles.ucsf.edu/susan.meffert">Meffert S</a>, Vu T, Clayton J, Mason P, <a href="https://profiles.ucsf.edu/prescott.woodruff">Woodruff P</a>, <b>Metcalfe J</b>. PMID: 30808453; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6860915' target='_blank'>PMC6860915</a>.</span> </div> <div id="ctl01_rpPublication_ctl30_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/30808453 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/30808453/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">19</span></a><span id='spnHideOnNoAltmetric30808453'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='30808453'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl31_liPublication" data-pmid="30683238" data-citations="43" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9530BF="1"> <div> <span id="ctl01_rpPublication_ctl31_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl31_lblPublication">Effect of Xpert MTB/RIF on clinical outcomes in routine care settings: individual patient data meta-analysis. Lancet Glob Health. 2019 02; 7(2):e191-e199.</span> <span id="ctl01_rpPublication_ctl31_lblPublicationIDs">Di Tanna GL, Khaki AR, Theron G, McCarthy K, Cox H, Mupfumi L, Trajman A, Zijenah LS, Mason P, Bandason T, Durovni B, Bara W, Hoelscher M, Clowes P, Mangu C, Chanda D, Pym A, Mwaba P, Cobelens F, Nicol MP, Dheda K, Churchyard G, Fielding K, <b>Metcalfe JZ</b>. PMID: 30683238; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6366854' target='_blank'>PMC6366854</a>.</span> </div> <div id="ctl01_rpPublication_ctl31_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/30683238 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/30683238/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">43</span></a><span id='spnHideOnNoAltmetric30683238'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='30683238'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9530BF;' data-color="#9530BF" OnClick="toggleFilter('data-Field9530BF')">Pub<span class='tooltiptext' style='background-color:#9530BF;'> Public Health</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl32_liPublication" data-pmid="29880306" data-citations="11" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-Field42BF30="1"> <div> <span id="ctl01_rpPublication_ctl32_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl32_lblPublication">Tuberculosis outbreak investigation using phylodynamic analysis. Epidemics. 2018 12; 25:47-53.</span> <span id="ctl01_rpPublication_ctl32_lblPublicationIDs">Kühnert D, Coscolla M, Brites D, Stucki D, <b>Metcalfe J</b>, Fenner L, Gagneux S, Stadler T. PMID: 29880306; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6227250' target='_blank'>PMC6227250</a>.</span> </div> <div id="ctl01_rpPublication_ctl32_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/29880306 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/29880306/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">11</span></a><span id='spnHideOnNoAltmetric29880306'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='29880306'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #42BF30;' data-color="#42BF30" OnClick="toggleFilter('data-Field42BF30')">Epi<span class='tooltiptext' style='background-color:#42BF30;'> Epidemiology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl33_liPublication" data-Field8EBF30="1" data-citations="23" data-Field9C30BF="1" data-pmid="28614668" data-TranslationClinicalTrial="0" data-TranslationHumans="0" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl33_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl33_lblPublication">Cryptic Microheteroresistance Explains Mycobacterium tuberculosis Phenotypic Resistance. Am J Respir Crit Care Med. 2017 11 01; 196(9):1191-1201.</span> <span id="ctl01_rpPublication_ctl33_lblPublicationIDs"><b>Metcalfe JZ</b>, Streicher E, Theron G, <a href="https://profiles.ucsd.edu/rebecca.colman">Colman RE</a>, Allender C, Lemmer D, Warren R, Engelthaler DM. PMID: 28614668; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5694839' target='_blank'>PMC5694839</a>.</span> </div> <div id="ctl01_rpPublication_ctl33_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/28614668 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/28614668/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">23</span></a><span id='spnHideOnNoAltmetric28614668'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='28614668'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl34_liPublication" data-pmid="28893776" data-citations="34" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldBF5930="1"> <div> <span id="ctl01_rpPublication_ctl34_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl34_lblPublication">Mycobacterium tuberculosis Subculture Results in Loss of Potentially Clinically Relevant Heteroresistance. Antimicrob Agents Chemother. 2017 11; 61(11).</span> <span id="ctl01_rpPublication_ctl34_lblPublicationIDs"><b>Metcalfe JZ</b>, Streicher E, Theron G, <a href="https://profiles.ucsd.edu/rebecca.colman">Colman RE</a>, Penaloza R, Allender C, Lemmer D, Warren RM, Engelthaler DM. PMID: 28893776; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5655066' target='_blank'>PMC5655066</a>.</span> </div> <div id="ctl01_rpPublication_ctl34_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/28893776 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/28893776/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">34</span></a><span id='spnHideOnNoAltmetric28893776'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='28893776'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF5930;' data-color="#BF5930" OnClick="toggleFilter('data-FieldBF5930')">Ant<span class='tooltiptext' style='background-color:#BF5930;'> Anti-Infective Agents</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl35_liPublication" data-pmid="28826458" data-citations="6" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl35_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl35_lblPublication">An LC-MS/MS-based method to analyze the anti-tuberculosis drug bedaquiline in hair. Int J Tuberc Lung Dis. 2017 09 01; 21(9):1069-1070.</span> <span id="ctl01_rpPublication_ctl35_lblPublicationIDs"><b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Wen A, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>. PMID: 28826458; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5701570' target='_blank'>PMC5701570</a>.</span> </div> <div id="ctl01_rpPublication_ctl35_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/28826458 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/28826458/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric28826458'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='28826458'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl36_liPublication" data-pmid="28240574" data-citations="11" data-TranslationHumans="1" data-TranslationAnimals="1" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl36_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl36_lblPublication">Elucidating the role of clofazimine for the treatment of tuberculosis. Int J Tuberc Lung Dis. 2016 12 01; 20(12):52-57.</span> <span id="ctl01_rpPublication_ctl36_lblPublicationIDs">O'Donnell MR, Padayatchi N, <b>Metcalfe JZ</b>. PMID: 28240574.</span> </div> <div id="ctl01_rpPublication_ctl36_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/28240574 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/28240574/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">11</span></a><span id='spnHideOnNoAltmetric28240574'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='28240574'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-animals' data-color='#33AA33' OnClick="toggleFilter('data-TranslationAnimals')">Animals</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl37_liPublication" data-pmid="27662546" data-citations="33" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldBF3030="1"> <div> <span id="ctl01_rpPublication_ctl37_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl37_lblPublication">Chronic lung disease in HIV-infected children established on antiretroviral therapy. AIDS. 2016 11 28; 30(18):2795-2803.</span> <span id="ctl01_rpPublication_ctl37_lblPublicationIDs">Rylance J, Mchugh G, <b>Metcalfe J</b>, Mujuru H, Nathoo K, Wilmore S, Rowland-Jones S, Majonga E, Kranzer K, Ferrand RA. PMID: 27662546; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5106089' target='_blank'>PMC5106089</a>.</span> </div> <div id="ctl01_rpPublication_ctl37_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27662546 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27662546/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">33</span></a><span id='spnHideOnNoAltmetric27662546'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27662546'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF3030;' data-color="#BF3030" OnClick="toggleFilter('data-FieldBF3030')">Acq<span class='tooltiptext' style='background-color:#BF3030;'> Acquired Immunodeficiency Synd</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl38_liPublication" data-pmid="27558397" data-citations="5" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9530BF="1"> <div> <span id="ctl01_rpPublication_ctl38_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl38_lblPublication">Tuberculosis progression rates in U.S. Immigrants following screening with interferon-gamma release assays. BMC Public Health. 2016 08 25; 16(1):875.</span> <span id="ctl01_rpPublication_ctl38_lblPublicationIDs">Blount RJ, Tran MC, Everett CK, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, <b>Metcalfe JZ</b>, Connor D, Miller CR, Grinsdale J, Higashi J, <a href="https://profiles.ucsf.edu/payam.nahid">Nahid P</a>. PMID: 27558397; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4997768' target='_blank'>PMC4997768</a>.</span> </div> <div id="ctl01_rpPublication_ctl38_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27558397 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27558397/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">5</span></a><span id='spnHideOnNoAltmetric27558397'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27558397'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9530BF;' data-color="#9530BF" OnClick="toggleFilter('data-Field9530BF')">Pub<span class='tooltiptext' style='background-color:#9530BF;'> Public Health</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl39_liPublication" data-pmid="27469388" data-citations="16" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-FieldBE30BF="1"> <div> <span id="ctl01_rpPublication_ctl39_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl39_lblPublication">Serial testing for latent tuberculosis using QuantiFERON-TB Gold In-Tube: A Markov model. Sci Rep. 2016 07 29; 6:30781.</span> <span id="ctl01_rpPublication_ctl39_lblPublicationIDs">Moses MW, Zwerling A, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Denkinger CM, Banaei N, Kik SV, <b>Metcalfe J</b>, Pai M, Dowdy D. PMID: 27469388; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4965809' target='_blank'>PMC4965809</a>.</span> </div> <div id="ctl01_rpPublication_ctl39_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27469388 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27469388/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">16</span></a><span id='spnHideOnNoAltmetric27469388'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27469388'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl40_liPublication" data-pmid="27287639" data-citations="15" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl40_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl40_lblPublication">Xpert(®) MTB/RIF detection of rifampin resistance and time to treatment initiation in Harare, Zimbabwe. Int J Tuberc Lung Dis. 2016 07; 20(7):882-9.</span> <span id="ctl01_rpPublication_ctl40_lblPublicationIDs"><b>Metcalfe JZ</b>, Makumbirofa S, Makamure B, Sandy C, Bara W, Mason P, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>. PMID: 27287639; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4961684' target='_blank'>PMC4961684</a>.</span> </div> <div id="ctl01_rpPublication_ctl40_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27287639 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27287639/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">15</span></a><span id='spnHideOnNoAltmetric27287639'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27287639'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl41_liPublication" data-pmid="27287660" data-citations="6" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl41_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl41_lblPublication">A multi-analyte panel for non-invasive pharmacokinetic monitoring of second-line anti-tuberculosis drugs. Int J Tuberc Lung Dis. 2016 07; 20(7):991-2.</span> <span id="ctl01_rpPublication_ctl41_lblPublicationIDs"><a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Wen A, <a href="https://profiles.ucsf.edu/catherine.koss">Koss C</a>, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>, <b>Metcalfe J</b>. PMID: 27287660; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5119745' target='_blank'>PMC5119745</a>.</span> </div> <div id="ctl01_rpPublication_ctl41_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27287660 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27287660/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric27287660'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27287660'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl42_liPublication" data-FieldBE30BF="1" data-citations="12" data-pmid="27191185" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl42_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl42_lblPublication">Quantifying Isoniazid Levels in Small Hair Samples: A Novel Method for Assessing Adherence during the Treatment of Latent and Active Tuberculosis. PLoS One. 2016; 11(5):e0155887.</span> <span id="ctl01_rpPublication_ctl42_lblPublicationIDs"><a href="https://profiles.ucsf.edu/roy.gerona">Gerona R</a>, Wen A, Chin AT, <a href="https://profiles.ucsf.edu/catherine.koss">Koss CA</a>, <a href="https://profiles.ucsf.edu/peter.bacchetti">Bacchetti P</a>, <b>Metcalfe J</b>, <a href="https://profiles.ucsf.edu/monica.gandhi">Gandhi M</a>. PMID: 27191185; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4871544' target='_blank'>PMC4871544</a>.</span> </div> <div id="ctl01_rpPublication_ctl42_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/27191185 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/27191185/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">12</span></a><span id='spnHideOnNoAltmetric27191185'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='27191185'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl43_liPublication" data-pmid="26970149" data-citations="37" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl43_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl43_lblPublication">Re-inventing adherence: toward a patient-centered model of care for drug-resistant tuberculosis and HIV. Int J Tuberc Lung Dis. 2016 Apr; 20(4):430-4.</span> <span id="ctl01_rpPublication_ctl43_lblPublicationIDs">O'Donnell MR, Daftary A, Frick M, Hirsch-Moverman Y, Amico KR, Senthilingam M, Wolf A, <b>Metcalfe JZ</b>, Isaakidis P, Davis JL, Zelnick JR, Brust JC, Naidu N, Garretson M, Bangsberg DR, Padayatchi N, Friedland G. PMID: 26970149; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4863995' target='_blank'>PMC4863995</a>.</span> </div> <div id="ctl01_rpPublication_ctl43_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/26970149 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/26970149/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">37</span></a><span id='spnHideOnNoAltmetric26970149'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='26970149'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl44_liPublication" data-doi="10.1136/archdischild-2016-310863.268" data-pmid="-16371" data-citations="-1" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0"> <div> <span id="ctl01_rpPublication_ctl44_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl44_lblPublication">G276(P) Chronic respiratory morbidity among HIV-infected children in Zimbabwe; a comparison of ART naïve and treated cohorts. Archives of Disease in Childhood. 2016 Apr 1; 101(Suppl 1):a156.</span> <span id="ctl01_rpPublication_ctl44_lblPublicationIDs">Rylance RS, Rylance RJ, McHugh MG, Mujuru MH, Munyati MS, Bandason BT, <b>Metcalfe MJ</b>, Kranzer KK, Ferrand FR. .</span> </div> <div id="ctl01_rpPublication_ctl44_divArticleMetrics" class="article-metrics"> View in: <a href=https://doi.org/10.1136/archdischild-2016-310863.268 target='_blank'>Publisher Site</a><span id='spnHideOnNoAltmetric10.1136/archdischild-2016-310863.268'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-doi='10.1136/archdischild-2016-310863.268'></span></span> </div> </li> <li id="ctl01_rpPublication_ctl45_liPublication" data-pmid="26372602" data-citations="13" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BFB5="1"> <div> <span id="ctl01_rpPublication_ctl45_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl45_lblPublication">Moving Beyond Directly Observed Therapy for Tuberculosis. PLoS Med. 2015 Sep; 12(9):e1001877.</span> <span id="ctl01_rpPublication_ctl45_lblPublicationIDs"><b>Metcalfe JZ</b>, O'Donnell MR, Bangsberg DR. PMID: 26372602; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4570797' target='_blank'>PMC4570797</a>.</span> </div> <div id="ctl01_rpPublication_ctl45_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/26372602 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/26372602/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">13</span></a><span id='spnHideOnNoAltmetric26372602'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='26372602'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl46_liPublication" data-pmid="25792637" data-citations="10" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl46_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl46_lblPublication">Suboptimal specificity of Xpert MTB/RIF among treatment-experienced patients. Eur Respir J. 2015 May; 45(5):1504-6.</span> <span id="ctl01_rpPublication_ctl46_lblPublicationIDs"><b>Metcalfe JZ</b>, Makumbirofa S, Makamure B, Mutetwa R, Peñaloza RA, Sandy C, Bara W, Mungofa S, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Mason P. PMID: 25792637; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4948946' target='_blank'>PMC4948946</a>.</span> </div> <div id="ctl01_rpPublication_ctl46_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25792637 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25792637/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">10</span></a><span id='spnHideOnNoAltmetric25792637'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25792637'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl47_liPublication" data-pmid="25601940" data-citations="17" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl47_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl47_lblPublication">Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J Infect Dis. 2015 Jul 15; 212(2):302-10.</span> <span id="ctl01_rpPublication_ctl47_lblPublicationIDs">Coscolla M, <a href="https://profiles.ucsf.edu/pennan.barry">Barry PM</a>, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, <a href="https://profiles.ucsf.edu/midori.kato-maeda">Kato-Maeda M</a>, <b>Metcalfe JZ</b>. PMID: 25601940; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4490235' target='_blank'>PMC4490235</a>.</span> </div> <div id="ctl01_rpPublication_ctl47_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25601940 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25601940/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">17</span></a><span id='spnHideOnNoAltmetric25601940'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25601940'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl48_liPublication" data-pmid="25527651" data-citations="1" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl48_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl48_lblPublication">Analysis of Green Light Committee implementation and acquisition of second-line drug resistance. Clin Infect Dis. 2015 Mar 15; 60(6):970.</span> <span id="ctl01_rpPublication_ctl48_lblPublicationIDs"><b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/eric.vittinghoff">Vittinghoff E</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>. PMID: 25527651; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC6276940' target='_blank'>PMC6276940</a>.</span> </div> <div id="ctl01_rpPublication_ctl48_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25527651 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25527651/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">1</span></a><span id='spnHideOnNoAltmetric25527651'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25527651'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl49_liPublication" data-Field8EBF30="1" data-citations="6" data-Field9C30BF="1" data-pmid="25436783" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl49_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl49_lblPublication">Xpert MTB/RIF false detection of rifampin-resistant tuberculosis from prior infection. Am J Respir Crit Care Med. 2014 Dec 01; 190(11):1316-8.</span> <span id="ctl01_rpPublication_ctl49_lblPublicationIDs"><a href="https://profiles.ucsf.edu/john.d.kelly">Kelly JD</a>, Grace Lin SY, <a href="https://profiles.ucsf.edu/pennan.barry">Barry PM</a>, <a href="https://profiles.ucsf.edu/chris.keh">Keh C</a>, Higashi J, <b>Metcalfe JZ</b>. PMID: 25436783; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5446205' target='_blank'>PMC5446205</a>.</span> </div> <div id="ctl01_rpPublication_ctl49_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25436783 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25436783/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">6</span></a><span id='spnHideOnNoAltmetric25436783'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25436783'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl50_liPublication" data-pmid="25188809" data-citations="45" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl50_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl50_lblPublication">Reproducibility of interferon gamma (IFN-γ) release Assays. A systematic review. Ann Am Thorac Soc. 2014 Oct; 11(8):1267-76.</span> <span id="ctl01_rpPublication_ctl50_lblPublicationIDs">Tagmouti S, Slater M, Benedetti A, Kik SV, Banaei N, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, <b>Metcalfe J</b>, Dowdy D, van Zyl Smit R, Dendukuri N, Pai M, Denkinger C. PMID: 25188809; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC5469356' target='_blank'>PMC5469356</a>.</span> </div> <div id="ctl01_rpPublication_ctl50_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25188809 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25188809/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">45</span></a><span id='spnHideOnNoAltmetric25188809'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25188809'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl51_liPublication" data-pmid="25164190" data-citations="10" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl51_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl51_lblPublication">Empiric tuberculosis treatment in retreatment patients in high HIV/tuberculosis-burden settings. Lancet Infect Dis. 2014 Sep; 14(9):794-5.</span> <span id="ctl01_rpPublication_ctl51_lblPublicationIDs"><b>Metcalfe JZ</b>, Mason P, Mungofa S, Sandy C, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>. PMID: 25164190; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4317243' target='_blank'>PMC4317243</a>.</span> </div> <div id="ctl01_rpPublication_ctl51_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25164190 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25164190/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">10</span></a><span id='spnHideOnNoAltmetric25164190'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25164190'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl52_liPublication" data-pmid="25734106" data-citations="30" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0"> <div> <span id="ctl01_rpPublication_ctl52_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl52_lblPublication">Impact of Xpert MTB/RIF on Antiretroviral Therapy-Associated Tuberculosis and Mortality: A Pragmatic Randomized Controlled Trial. Open Forum Infect Dis. 2014 Mar; 1(1):ofu038.</span> <span id="ctl01_rpPublication_ctl52_lblPublicationIDs">Mupfumi L, Makamure B, Chirehwa M, Sagonda T, Zinyowera S, Mason P, <b>Metcalfe JZ</b>, Mutetwa R. PMID: 25734106; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4324195' target='_blank'>PMC4324195</a>.</span> </div> <div id="ctl01_rpPublication_ctl52_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/25734106 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25734106/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">30</span></a><span id='spnHideOnNoAltmetric25734106'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='25734106'></span></span> </div> </li> <li id="ctl01_rpPublication_ctl53_liPublication" data-Field8EBF30="1" data-citations="17" data-Field9C30BF="1" data-pmid="24869625" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="1" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl53_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl53_lblPublication">Impact of GeneXpert MTB/RIF on patients and tuberculosis programs in a low-burden setting. a hypothetical trial. Am J Respir Crit Care Med. 2014 Jun 15; 189(12):1551-9.</span> <span id="ctl01_rpPublication_ctl53_lblPublicationIDs">Davis JL, Kawamura LM, <a href="https://profiles.ucsf.edu/lelia.chaisson">Chaisson LH</a>, Grinsdale J, Benhammou J, Ho C, Babst A, Banouvong H, <b>Metcalfe JZ</b>, Pandori M, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>. PMID: 24869625; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4226012' target='_blank'>PMC4226012</a>.</span> </div> <div id="ctl01_rpPublication_ctl53_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/24869625 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24869625/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">17</span></a><span id='spnHideOnNoAltmetric24869625'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='24869625'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl54_liPublication" data-pmid="24396134" data-citations="327" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BCBF="1"> <div> <span id="ctl01_rpPublication_ctl54_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl54_lblPublication">Gamma interferon release assays for detection of Mycobacterium tuberculosis infection. Clin Microbiol Rev. 2014 Jan; 27(1):3-20.</span> <span id="ctl01_rpPublication_ctl54_lblPublicationIDs">Pai M, Denkinger CM, Kik SV, Rangaka MX, Zwerling A, Oxlade O, <b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Dowdy DW, Dheda K, Banaei N. PMID: 24396134; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3910908' target='_blank'>PMC3910908</a>.</span> </div> <div id="ctl01_rpPublication_ctl54_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/24396134 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24396134/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">327</span></a><span id='spnHideOnNoAltmetric24396134'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='24396134'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl55_liPublication" data-pmid="24377879" data-citations="14" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl55_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl55_lblPublication">Drug-resistant tuberculosis in high-risk groups, Zimbabwe. Emerg Infect Dis. 2014 Jan; 20(1):135-7.</span> <span id="ctl01_rpPublication_ctl55_lblPublicationIDs"><b>Metcalfe JZ</b>, Makumbirofa S, Makamure B, Sandy C, Bara W, Mungofa S, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Mason P. PMID: 24377879; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3884722' target='_blank'>PMC3884722</a>.</span> </div> <div id="ctl01_rpPublication_ctl55_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/24377879 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24377879/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">14</span></a><span id='spnHideOnNoAltmetric24377879'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='24377879'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl56_liPublication" data-FieldBE30BF="1" data-citations="18" data-pmid="24278155" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl56_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl56_lblPublication">Rapid molecular testing for TB to guide respiratory isolation in the U.S.: a cost-benefit analysis. PLoS One. 2013; 8(11):e79669.</span> <span id="ctl01_rpPublication_ctl56_lblPublicationIDs">Millman AJ, Dowdy DW, Miller CR, Brownell R, <b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Davis JL. PMID: 24278155; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3835836' target='_blank'>PMC3835836</a>.</span> </div> <div id="ctl01_rpPublication_ctl56_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/24278155 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24278155/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">18</span></a><span id='spnHideOnNoAltmetric24278155'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='24278155'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl57_liPublication" data-pmid="23842135" data-citations="5" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldBF3030="1"> <div> <span id="ctl01_rpPublication_ctl57_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl57_lblPublication">Rifampin monoresistant tuberculosis and HIV comorbidity in California, 1993-2008: a retrospective cohort study. AIDS. 2013 Oct 23; 27(16):2615-22.</span> <span id="ctl01_rpPublication_ctl57_lblPublicationIDs">Prach LM, <a href="https://profiles.ucsf.edu/lisa.pascopella">Pascopella L</a>, <a href="https://profiles.ucsf.edu/pennan.barry">Barry PM</a>, <a href="https://profiles.ucsf.edu/jennifer.flood">Flood J</a>, <a href="https://profiles.ucsf.edu/travis.porco">Porco TC</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, <b>Metcalfe JZ</b>. PMID: 23842135; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4296030' target='_blank'>PMC4296030</a>.</span> </div> <div id="ctl01_rpPublication_ctl57_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/23842135 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23842135/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">5</span></a><span id='spnHideOnNoAltmetric23842135'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='23842135'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF3030;' data-color="#BF3030" OnClick="toggleFilter('data-FieldBF3030')">Acq<span class='tooltiptext' style='background-color:#BF3030;'> Acquired Immunodeficiency Synd</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl58_liPublication" data-pmid="24167454" data-citations="2" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BFB5="1"> <div> <span id="ctl01_rpPublication_ctl58_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl58_lblPublication">A transcriptional signature for active TB: have we found the needle in the haystack? PLoS Med. 2013 Oct; 10(10):e1001539.</span> <span id="ctl01_rpPublication_ctl58_lblPublicationIDs"><a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Walter ND, <b>Metcalfe JZ</b>, Davis JL. PMID: 24167454; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3805486' target='_blank'>PMC3805486</a>.</span> </div> <div id="ctl01_rpPublication_ctl58_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/24167454 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24167454/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">2</span></a><span id='spnHideOnNoAltmetric24167454'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='24167454'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl59_liPublication" data-pmid="23541151" data-citations="64" data-TranslationHumans="1" data-TranslationAnimals="1" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field9C30BF="1"> <div> <span id="ctl01_rpPublication_ctl59_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl59_lblPublication">Systematic review of clofazimine for the treatment of drug-resistant tuberculosis. Int J Tuberc Lung Dis. 2013 Aug; 17(8):1001-7.</span> <span id="ctl01_rpPublication_ctl59_lblPublicationIDs">Gopal M, Padayatchi N, <b>Metcalfe JZ</b>, O'Donnell MR. PMID: 23541151; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4003893' target='_blank'>PMC4003893</a>.</span> </div> <div id="ctl01_rpPublication_ctl59_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/23541151 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23541151/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">64</span></a><span id='spnHideOnNoAltmetric23541151'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='23541151'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-animals' data-color='#33AA33' OnClick="toggleFilter('data-TranslationAnimals')">Animals</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl60_liPublication" data-pmid="23745218" data-citations="11" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl60_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl60_lblPublication">Tuberculosis and HIV co-infection, California, USA, 1993–2008. Emerg Infect Dis. 2013 Mar; 19(3):400-6.</span> <span id="ctl01_rpPublication_ctl60_lblPublicationIDs"><b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/travis.porco">Porco TC</a>, Westenhouse J, Damesyn M, Facer M, Hill J, Xia Q, Watt JP, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, <a href="https://profiles.ucsf.edu/jennifer.flood">Flood J</a>. PMID: 23745218; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3648844' target='_blank'>PMC3648844</a>.</span> </div> <div id="ctl01_rpPublication_ctl60_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/23745218 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23745218/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">11</span></a><span id='spnHideOnNoAltmetric23745218'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='23745218'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl61_liPublication" data-FieldBE30BF="1" data-citations="12" data-pmid="23409072" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl61_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl61_lblPublication">Microscopic-observation drug-susceptibility assay for the diagnosis of drug-resistant tuberculosis in Harare, Zimbabwe. PLoS One. 2013; 8(2):e55872.</span> <span id="ctl01_rpPublication_ctl61_lblPublicationIDs">Makamure B, Mhaka J, Makumbirofa S, Mutetwa R, Mupfumi L, Mason P, <b>Metcalfe JZ</b>. PMID: 23409072; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3569460' target='_blank'>PMC3569460</a>.</span> </div> <div id="ctl01_rpPublication_ctl61_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/23409072 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23409072/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">12</span></a><span id='spnHideOnNoAltmetric23409072'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='23409072'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl62_liPublication" data-Field8EBF30="1" data-citations="69" data-Field9C30BF="1" data-pmid="23103734" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl62_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl62_lblPublication">Test variability of the QuantiFERON-TB gold in-tube assay in clinical practice. Am J Respir Crit Care Med. 2013 Jan 15; 187(2):206-11.</span> <span id="ctl01_rpPublication_ctl62_lblPublicationIDs"><b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, <a href="https://profiles.ucsf.edu/chuck.mcculloch">McCulloch CE</a>, Lew JD, Ha NP, Graviss EA. PMID: 23103734; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3570654' target='_blank'>PMC3570654</a>.</span> </div> <div id="ctl01_rpPublication_ctl62_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/23103734 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23103734/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">69</span></a><span id='spnHideOnNoAltmetric23103734'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='23103734'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl63_liPublication" data-FieldBE30BF="1" data-citations="4" data-pmid="22649569" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl63_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl63_lblPublication">Impact of isoniazid resistance-conferring mutations on the clinical presentation of isoniazid monoresistant tuberculosis. PLoS One. 2012; 7(5):e37956.</span> <span id="ctl01_rpPublication_ctl63_lblPublicationIDs">Dantes R, <b>Metcalfe J</b>, Kim E, <a href="https://profiles.ucsf.edu/midori.kato-maeda">Kato-Maeda M</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Kawamura M, <a href="https://profiles.ucsf.edu/payam.nahid">Nahid P</a>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>. PMID: 22649569; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3359338' target='_blank'>PMC3359338</a>.</span> </div> <div id="ctl01_rpPublication_ctl63_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/22649569 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22649569/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">4</span></a><span id='spnHideOnNoAltmetric22649569'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='22649569'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl64_liPublication" data-pmid="22306557" data-citations="33" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field42BF30="1"> <div> <span id="ctl01_rpPublication_ctl64_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl64_lblPublication">A causal framework for understanding the effect of losses to follow-up on epidemiologic analyses in clinic-based cohorts: the case of HIV-infected patients on antiretroviral therapy in Africa. Am J Epidemiol. 2012 May 15; 175(10):1080-7.</span> <span id="ctl01_rpPublication_ctl64_lblPublicationIDs">Geng EH, <a href="https://profiles.ucsf.edu/david.glidden">Glidden DV</a>, Bangsberg DR, Bwana MB, Musinguzi N, Nash D, <b>Metcalfe JZ</b>, Yiannoutsos CT, <a href="https://profiles.ucsf.edu/jeffrey.n.martin">Martin JN</a>, <a href="https://profiles.ucsf.edu/maya.petersen">Petersen ML</a>. PMID: 22306557; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3353135' target='_blank'>PMC3353135</a>.</span> </div> <div id="ctl01_rpPublication_ctl64_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/22306557 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22306557/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">33</span></a><span id='spnHideOnNoAltmetric22306557'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='22306557'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #42BF30;' data-color="#42BF30" OnClick="toggleFilter('data-Field42BF30')">Epi<span class='tooltiptext' style='background-color:#42BF30;'> Epidemiology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl65_liPublication" data-pmid="21996694" data-citations="123" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl65_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl65_lblPublication">Interferon-γ release assays for active pulmonary tuberculosis diagnosis in adults in low- and middle-income countries: systematic review and meta-analysis. J Infect Dis. 2011 Nov 15; 204 Suppl 4:S1120-9.</span> <span id="ctl01_rpPublication_ctl65_lblPublicationIDs"><b>Metcalfe JZ</b>, Everett CK, Steingart KR, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, <a href="https://profiles.ucsf.edu/laurence.huang">Huang L</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Pai M. PMID: 21996694; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3192542' target='_blank'>PMC3192542</a>.</span> </div> <div id="ctl01_rpPublication_ctl65_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/21996694 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21996694/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">123</span></a><span id='spnHideOnNoAltmetric21996694'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='21996694'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl66_liPublication" data-Field8EBF30="1" data-citations="0" data-Field9C30BF="1" data-pmid="21642250" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl66_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl66_lblPublication">TB/HIV: an orphan disease? Am J Respir Crit Care Med. 2011 Jun 01; 183(11):1441-2.</span> <span id="ctl01_rpPublication_ctl66_lblPublicationIDs">Brust JC, O'Donnell MR, <b>Metcalfe JZ</b>. PMID: 21642250.</span> </div> <div id="ctl01_rpPublication_ctl66_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/21642250 target='_blank'>PubMed</a><span id='spnHideOnNoAltmetric21642250'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='21642250'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl67_liPublication" data-pmid="21239993" data-citations="119" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldBF3030="1"> <div> <span id="ctl01_rpPublication_ctl67_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl67_lblPublication">Interferon-gamma release assays for the diagnosis of latent tuberculosis infection in HIV-infected individuals: a systematic review and meta-analysis. J Acquir Immune Defic Syndr. 2011 Mar 01; 56(3):230-8.</span> <span id="ctl01_rpPublication_ctl67_lblPublicationIDs"><a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Smith R, Steingart KR, <b>Metcalfe JZ</b>, Date A, Coleman C, Marston BJ, <a href="https://profiles.ucsf.edu/laurence.huang">Huang L</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Pai M. PMID: 21239993; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3383328' target='_blank'>PMC3383328</a>.</span> </div> <div id="ctl01_rpPublication_ctl67_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/21239993 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21239993/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">119</span></a><span id='spnHideOnNoAltmetric21239993'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='21239993'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF3030;' data-color="#BF3030" OnClick="toggleFilter('data-FieldBF3030')">Acq<span class='tooltiptext' style='background-color:#BF3030;'> Acquired Immunodeficiency Synd</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl68_liPublication" data-pmid="21366420" data-citations="62" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-Field30BCBF="1"> <div> <span id="ctl01_rpPublication_ctl68_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl68_lblPublication">Genotyping of Mycobacterium tuberculosis: application in epidemiologic studies. Future Microbiol. 2011 Feb; 6(2):203-16.</span> <span id="ctl01_rpPublication_ctl68_lblPublicationIDs"><a href="https://profiles.ucsf.edu/midori.kato-maeda">Kato-Maeda M</a>, <b>Metcalfe JZ</b>, Flores L. PMID: 21366420; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC4296029' target='_blank'>PMC4296029</a>.</span> </div> <div id="ctl01_rpPublication_ctl68_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/21366420 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21366420/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">62</span></a><span id='spnHideOnNoAltmetric21366420'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='21366420'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BCBF;' data-color="#30BCBF" OnClick="toggleFilter('data-Field30BCBF')">Mic<span class='tooltiptext' style='background-color:#30BCBF;'> Microbiology</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl69_liPublication" data-pmid="20735924" data-citations="10" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl69_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl69_lblPublication">Determinants of multidrug-resistant tuberculosis clusters, California, USA, 2004-2007. Emerg Infect Dis. 2010 Sep; 16(9):1403-9.</span> <span id="ctl01_rpPublication_ctl69_lblPublicationIDs"><b>Metcalfe JZ</b>, Kim EY, Lin SY, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Oh P, <a href="https://profiles.ucsf.edu/jennifer.flood">Flood J</a>, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, <a href="https://profiles.ucsf.edu/midori.kato-maeda">Kato-Maeda M</a>. PMID: 20735924; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC3294976' target='_blank'>PMC3294976</a>.</span> </div> <div id="ctl01_rpPublication_ctl69_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/20735924 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20735924/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">10</span></a><span id='spnHideOnNoAltmetric20735924'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='20735924'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl70_liPublication" data-doi="10.1186/1742-4690-7-s1-o1" data-pmid="-16374" data-citations="-1" data-TranslationHumans="0" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0"> <div> <span id="ctl01_rpPublication_ctl70_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl70_lblPublication">Evolution of tuberculosis/HIV co-infection in California during the HAART Era, 1996-2007. Retrovirology. 2010 May 1; 7(Suppl 1):o1.</span> <span id="ctl01_rpPublication_ctl70_lblPublicationIDs"><b>Metcalfe MJ</b>, Facer FM, Damesyn DM, Xia XQ, Watt WJ, Hill HJ, Hopewell HP, Westenhouse WJ, Flood FJ. .</span> </div> <div id="ctl01_rpPublication_ctl70_divArticleMetrics" class="article-metrics"> View in: <a href=https://doi.org/10.1186/1742-4690-7-s1-o1 target='_blank'>Publisher Site</a><span id='spnHideOnNoAltmetric10.1186/1742-4690-7-s1-o1'> Mentions: <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-doi='10.1186/1742-4690-7-s1-o1'></span></span> </div> </li> <li id="ctl01_rpPublication_ctl71_liPublication" data-FieldBE30BF="1" data-citations="35" data-pmid="20361038" data-Field30BFB5="1" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="1"> <div> <span id="ctl01_rpPublication_ctl71_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl71_lblPublication">Clinical and radiographic factors do not accurately diagnose smear-negative tuberculosis in HIV-infected inpatients in Uganda: a cross-sectional study. PLoS One. 2010 Mar 26; 5(3):e9859.</span> <span id="ctl01_rpPublication_ctl71_lblPublicationIDs">Davis JL, Worodria W, Kisembo H, <b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Kawooya M, Kyeyune R, den Boon S, Powell K, Okello R, Yoo S, <a href="https://profiles.ucsf.edu/laurence.huang">Huang L</a>. PMID: 20361038; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC2845634' target='_blank'>PMC2845634</a>.</span> </div> <div id="ctl01_rpPublication_ctl71_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/20361038 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20361038/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">35</span></a><span id='spnHideOnNoAltmetric20361038'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='20361038'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #30BFB5;' data-color="#30BFB5" OnClick="toggleFilter('data-Field30BFB5')">Med<span class='tooltiptext' style='background-color:#30BFB5;'> Medicine (General)</span></a><a class='publication-filter' style='border:1px solid #BE30BF;' data-color="#BE30BF" OnClick="toggleFilter('data-FieldBE30BF')">Sci<span class='tooltiptext' style='background-color:#BE30BF;'> Science</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl72_liPublication" data-Field8EBF30="1" data-citations="15" data-Field9C30BF="1" data-pmid="19797760" data-TranslationClinicalTrial="0" data-TranslationHumans="1" data-TranslationPublicHealth="0" data-TranslationAnimals="0" data-TranslationCells="0"> <div> <span id="ctl01_rpPublication_ctl72_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl72_lblPublication">Evaluation of quantitative IFN-gamma response for risk stratification of active tuberculosis suspects. Am J Respir Crit Care Med. 2010 Jan 01; 181(1):87-93.</span> <span id="ctl01_rpPublication_ctl72_lblPublicationIDs"><b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, <a href="https://profiles.ucsf.edu/eric.vittinghoff">Vittinghoff E</a>, Ho C, Grinsdale J, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, Kawamura LM, <a href="https://profiles.ucsf.edu/payam.nahid">Nahid P</a>. PMID: 19797760; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC2797629' target='_blank'>PMC2797629</a>.</span> </div> <div id="ctl01_rpPublication_ctl72_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/19797760 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/19797760/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">15</span></a><span id='spnHideOnNoAltmetric19797760'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='19797760'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #8EBF30;' data-color="#8EBF30" OnClick="toggleFilter('data-Field8EBF30')">Cri<span class='tooltiptext' style='background-color:#8EBF30;'> Critical Care</span></a><a class='publication-filter' style='border:1px solid #9C30BF;' data-color="#9C30BF" OnClick="toggleFilter('data-Field9C30BF')">Pul<span class='tooltiptext' style='background-color:#9C30BF;'> Pulmonary Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a> </div> </li> <li id="ctl01_rpPublication_ctl73_liPublication" data-pmid="19086909" data-citations="66" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="1" data-TranslationPublicHealth="0" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl73_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl73_lblPublication">Clinical characteristics and treatment outcomes of patients with isoniazid-monoresistant tuberculosis. Clin Infect Dis. 2009 Jan 15; 48(2):179-85.</span> <span id="ctl01_rpPublication_ctl73_lblPublicationIDs"><a href="https://profiles.ucsf.edu/adithya.cattamanchi">Cattamanchi A</a>, Dantes RB, <b>Metcalfe JZ</b>, <a href="https://profiles.ucsf.edu/leah.jarlsberg">Jarlsberg LG</a>, Grinsdale J, Kawamura LM, Osmond D, <a href="https://profiles.ucsf.edu/philip.hopewell">Hopewell PC</a>, <a href="https://profiles.ucsf.edu/payam.nahid">Nahid P</a>. PMID: 19086909; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC2756509' target='_blank'>PMC2756509</a>.</span> </div> <div id="ctl01_rpPublication_ctl73_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/19086909 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/19086909/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">66</span></a><span id='spnHideOnNoAltmetric19086909'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='19086909'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-cells' data-color='#BB3333' OnClick="toggleFilter('data-TranslationCells')">Cells</a> </div> </li> <li id="ctl01_rpPublication_ctl74_liPublication" data-pmid="18325275" data-citations="121" data-TranslationHumans="1" data-TranslationAnimals="0" data-TranslationCells="0" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-FieldA3BF30="1"> <div> <span id="ctl01_rpPublication_ctl74_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl74_lblPublication">Leptospirosis-associated severe pulmonary hemorrhagic syndrome, Salvador, Brazil. Emerg Infect Dis. 2008 Mar; 14(3):505-8.</span> <span id="ctl01_rpPublication_ctl74_lblPublicationIDs">Gouveia EL, <b>Metcalfe J</b>, de Carvalho AL, Aires TS, Villasboas-Bisneto JC, Queirroz A, Santos AC, Salgado K, Reis MG, Ko AI. PMID: 18325275; PMCID: <a href='//www.ncbi.nlm.nih.gov/pmc/articles/PMC2570821' target='_blank'>PMC2570821</a>.</span> </div> <div id="ctl01_rpPublication_ctl74_divArticleMetrics" class="article-metrics"> View in: <a href=https://www.ncbi.nlm.nih.gov/pubmed/18325275 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/18325275/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">121</span></a><span id='spnHideOnNoAltmetric18325275'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='18325275'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #A3BF30;' data-color="#A3BF30" OnClick="toggleFilter('data-FieldA3BF30')">Com<span class='tooltiptext' style='background-color:#A3BF30;'> Communicable Diseases</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl75_liPublication" data-pmid="12932096" data-citations="76" data-TranslationHumans="1" data-TranslationAnimals="1" data-TranslationCells="0" data-TranslationPublicHealth="1" data-TranslationClinicalTrial="0" data-FieldBF3067="1"> <div> <span id="ctl01_rpPublication_ctl75_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl75_lblPublication">Endemic malaria in the Peruvian Amazon region of Iquitos. Am J Trop Med Hyg. 2003 Jul; 69(1):45-52.</span> <span id="ctl01_rpPublication_ctl75_lblPublicationIDs"><a href="https://profiles.ucdavis.edu/baback.roshanravan">Roshanravan B</a>, <a href="https://profiles.ucsd.edu/elina.kari">Kari E</a>, Gilman RH, Cabrera L, Lee E, <b>Metcalfe J</b>, Calderon M, Lescano AG, Montenegro SH, Calampa C, Vinetz JM. PMID: 12932096.</span> </div> <div id="ctl01_rpPublication_ctl75_divArticleMetrics" class="article-metrics"> View in: <a href=http://www.ncbi.nlm.nih.gov/pubmed/12932096 target='_blank'>PubMed</a> Mentions: <a href='https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/12932096/citedby/' target='_blank' class="PMC-citations"><span class="PMC-citation-count">76</span></a><span id='spnHideOnNoAltmetric12932096'> <span class='altmetric-embed' data-link-target='_blank' data-badge-popover='bottom' data-badge-type='4' data-hide-no-mentions='true' data-pmid='12932096'></span></span> Fields: <div style='display:inline-flex'><a class='publication-filter' style='border:1px solid #BF3067;' data-color="#BF3067" OnClick="toggleFilter('data-FieldBF3067')">Tro<span class='tooltiptext' style='background-color:#BF3067;'> Tropical Medicine</span></a></div> Translation:<a class='publication-filter publication-humans' data-color='#3333CC' OnClick="toggleFilter('data-TranslationHumans')">Humans</a><a class='publication-filter publication-animals' data-color='#33AA33' OnClick="toggleFilter('data-TranslationAnimals')">Animals</a><a class='publication-filter publication-public-health' data-color='#609' OnClick="toggleFilter('data-TranslationPublicHealth')">PH<span class='tooltiptext' style='background-color:#609;'>Public Health</span></a> </div> </li> <li id="ctl01_rpPublication_ctl76_liPublication"> <div> <span id="ctl01_rpPublication_ctl76_lblPublicationAuthors"></span> <span id="ctl01_rpPublication_ctl76_lblPublication">Carriage of Extended-Spectrum Beta-Lactamase-producing Enterobacteriaceae in HIV-infected children in Zimbabwe. Accepted, Journal of Medical Microbiology. </span> <span id="ctl01_rpPublication_ctl76_lblPublicationIDs">Stephanie Margaret Selike Wilmore, MRCP, <b>MSc; Katharina Kranzer; Alan Williams; Beauty Makamure; Agness Nhdiza; Justin Mayini; Tsitsi Bandason; John Metcalfe; Mark Nicol; Indran Balakrishnan; Matthew Ellington; Neil Woodford; Susan Hopkins; Tim D McHugh; Rashida Ferrand.</b> . </span> </div> </li> </ol> </div> </div> <div id="divFiltered" style='display: none; margin-top: 6px;' class="publications"> <ol id="ulFiltered"> </ol> </div> <div id="divTimeline" style='display: none; margin-top: 6px;'> <div id="publicationTimelineGraph"> <div class="details-text" style="margin-bottom: 10px;"> This graph shows the total number of publications by year. To see the data as text, <a id="divShowTimelineTable" tabindex="0">click here</a>. </div> <img src="//chart.googleapis.com/chart?chs=595x100&chf=bg,s,ffffff|c,s,ffffff&chxt=x,y&chxl=0:|'94||'96||'98||'00||'02||'04||'06||'08||'10||'12||'14||'16||'18||'20||'22||'24|1:|0|9&cht=bvs&chd=t:0,0,0,0,0,0,0,0,0,11,0,0,0,0,11,22,33,44,33,67,89,33,100,33,11,100,56,78,33,56,22&chdl=Publications&chco=80B1D3&chbh=10" id="ctl01_timelineBar" border="0" alt="Bar chart showing 75 publications over 18 distinct years, with a maximum of 9 publications in 2016 and 2019" /> </div> <div id="divTimelineTable" class="listTable" style="display: none; margin-top: 12px; margin-bottom: 8px;"> <div class="details-text" style="margin-bottom: 10px;"> This graph shows the total number of publications by year. To return to the graph, <a id="dirReturnToTimeline" tabindex="0">click here</a>. </div> <table style="width:592px"><tr><th>Year</th><th>Publications</th></tr><tr><td style="text-align:center;">2003</td><td style="text-align:center;">1</td></tr><tr><td style="text-align:center;">2008</td><td style="text-align:center;">1</td></tr><tr><td style="text-align:center;">2009</td><td style="text-align:center;">2</td></tr><tr><td style="text-align:center;">2010</td><td style="text-align:center;">3</td></tr><tr><td style="text-align:center;">2011</td><td style="text-align:center;">4</td></tr><tr><td style="text-align:center;">2012</td><td style="text-align:center;">3</td></tr><tr><td style="text-align:center;">2013</td><td style="text-align:center;">6</td></tr><tr><td style="text-align:center;">2014</td><td style="text-align:center;">8</td></tr><tr><td style="text-align:center;">2015</td><td style="text-align:center;">3</td></tr><tr><td style="text-align:center;">2016</td><td style="text-align:center;">9</td></tr><tr><td style="text-align:center;">2017</td><td style="text-align:center;">3</td></tr><tr><td style="text-align:center;">2018</td><td style="text-align:center;">1</td></tr><tr><td style="text-align:center;">2019</td><td style="text-align:center;">9</td></tr><tr><td style="text-align:center;">2020</td><td style="text-align:center;">5</td></tr><tr><td style="text-align:center;">2021</td><td style="text-align:center;">7</td></tr><tr><td style="text-align:center;">2022</td><td style="text-align:center;">3</td></tr><tr><td style="text-align:center;">2023</td><td style="text-align:center;">5</td></tr><tr><td style="text-align:center;">2024</td><td style="text-align:center;">2</td></tr></table> </div> </div> <div id="divFieldSummary" style='display: none; margin-top: 6px;'> <div class="details-text" style="margin-bottom: 10px;"> This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, <a onclick="showFieldSummaryAlt()">click here</a>. </div> <div id="publicationJournalHeadings"> <div id="piechart" style="width: 580px; height: 400px;"></div> </div> </div> <div id="divFieldSummaryAlt" style='display: none; margin-top: 6px;' class="listTable"> <div class="details-text" style="margin-bottom: 10px;"> This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. 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"; text = text + authors + '. '; text = text + title; if (ids) text = text + item.getElementsByTagName("span")[2].textContent; text = text + "\r\n"; if (doubleSpacing) text = text + "\r\n"; } catch (err) { } var item = lis[i].cloneNode(true); } document.getElementById("txtPublications-text-options").textContent = text; } </script> <script type="text/javascript" src="https://www.gstatic.com/charts/loader.js"></script> <script type="text/javascript" src="//ajax.googleapis.com/ajax/libs/jquery/1.10.2/jquery.min.js"></script> <script type="text/javascript"> // Load the Visualization API and the piechart package. google.charts.load('current', { 'packages': ['corechart'] }); // Set a callback to run when the Google Visualization API is loaded. //google.charts.setOnLoadCallback(drawChart); function drawChart() { var jsonData = $.ajax({ url: "https://profiles.ucsf.edu/profile/modules/CustomViewAuthorInAuthorship/BibliometricsSvc.aspx?p=175630", dataType: "json", async: false }).responseText; // Create our data table out of JSON data loaded from server. var data = new google.visualization.DataTable(jsonData); var colors = jsonData.substring(jsonData.lastIndexOf('\"colors\": \"[#') + 12, jsonData.indexOf("]", jsonData.lastIndexOf('\"colors\": \"[#') + 12)); var colorArray = colors.split(","); //colorArray = ['#4E79A7', '#F28E2B', '#E15759', '#76B7B2', '#59A14F', '#EDC948', '#B07AA1', '#FF9DA7', '#9C755F', '#BAB0AC']; // Instantiate and draw our chart, passing in some options. var chart = new google.visualization.PieChart(document.getElementById('piechart')); chart.draw(data, { width: 680, height: 300, fontSize: 12, colors: colorArray, legend: {alignment: 'center'}, chartArea: {left:20,top:20,width:'90%',height:'90%'}, tooltip: { text: 'percentage' } }); var altTableText = jsonData.substring(jsonData.lastIndexOf('\"altTxtTable\": \"') + 16, jsonData.indexOf("</table>", jsonData.lastIndexOf('\"altTxtTable\": \"') + 16) + 5); document.getElementById("publicationJournalHeadingsAlt").innerHTML = altTableText; } </script> </div></div></div></div> <div class="SupportText"> </div> </div> </div> <div class="profilesContentPassive"> <div class="panelPassive"> <div class="passive-header"> John's Networks </div> <!-- <div style='font-size: 11px;'> Click the <div style="color:#090;display:inline;font-weight:bold;">Explore</div> buttons for more information and interactive visualizations! </div> --> <div class="passiveSectionBody"><!-- needed --></div> <div class="passiveSectionLine"><!-- needed --></div> <div class="passiveSectionHead"> <div style="white-space: nowrap; display: inline"> Concepts (228) <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl00_Info" class="questionImage"></a> </div> <div id='314a2623-b1cb-4b34-80c2-6837daa53812' class='passiveSectionHeadDescription' style='display: block;'> <div>Derived automatically from this person's publications.</div> </div> </div> <div class="passiveSectionBody"> <ul> <li> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl01_itemUrl" href="https://profiles.ucsf.edu/profile/159691">Tuberculosis, Multidrug-Resistant</a> </li> <li> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl02_itemUrl" href="https://profiles.ucsf.edu/profile/143750">Antitubercular Agents</a> </li> <li> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl03_itemUrl" href="https://profiles.ucsf.edu/profile/151568">Mycobacterium tuberculosis</a> </li> <li> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl04_itemUrl" href="https://profiles.ucsf.edu/profile/156574">Tuberculosis</a> </li> <li> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl05_itemUrl" href="https://profiles.ucsf.edu/profile/162461">Drug Resistance, Multiple, Bacterial</a> </li> </ul> </div> <div class="dblarrow"> <a id="ctl00_ContentPassive_rptPassive_ctl01_ctl00_passiveList_ctl06_moreurl" class="prns-explore-btn" href="https://profiles.ucsf.edu/john.metcalfe/1453">Explore</a> </div> <div class="passiveSectionLine">_</div> <div class="passiveSectionHead"> <div style="white-space: nowrap; display: inline"> Co-Authors (34) <a id="ctl00_ContentPassive_rptPassive_ctl02_ctl00_passiveList_ctl00_Info" class="questionImage"></a> </div> <div id='17d9bb45-898d-4ed9-aaa0-bdf3bdb2b3e3' class='passiveSectionHeadDescription' style='display: block;'> <div>People in Profiles who have published with this person.</div> </div> </div> <div class="passiveSectionBody"> <ul> <li> <a href = 'https://profiles.ucsf.edu/roy.gerona'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=174604&Thumbnail=True&Width=15' width='15' height='30'/></div>Gerona, Roy<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/philip.hopewell'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=196064&Thumbnail=True&Width=15' width='15' height='30'/></div>Hopewell, Philip<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/monica.gandhi'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=196526&Thumbnail=True&Width=15' width='15' height='30'/></div>Gandhi, Monica<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/jason.limberis'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=71162707&Thumbnail=True&Width=15' width='15' height='30'/></div>Limberis, Jason<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/peter.bacchetti'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=193529&Thumbnail=True&Width=15' width='15' height='30'/></div>Bacchetti, Peter<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> </ul> </div> <div class="dblarrow"> <a id="ctl00_ContentPassive_rptPassive_ctl02_ctl00_passiveList_ctl06_moreurl" class="prns-explore-btn" href="https://profiles.ucsf.edu/john.metcalfe/65">Explore</a> </div> <div class="passiveSectionLine">_</div> <div class="passiveSectionHead"> <div style="white-space: nowrap; display: inline"> Similar People (60) <a id="ctl00_ContentPassive_rptPassive_ctl03_ctl00_passiveList_ctl00_Info" class="questionImage"></a> </div> <div id='780f3ddd-9a6c-4ad0-96cb-e165bb8c3e30' class='passiveSectionHeadDescription' style='display: block;'> <div>People who share similar concepts with this person.</div> </div> </div> <div class="passiveSectionBody"> <ul> <li> <a href = 'https://profiles.ucsd.edu/timothy.rodwell'><div class='thumbnail'><img src = 'https://profiles.ucsd.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=184857&Thumbnail=True&Width=15' width='15' height='30'/></div>Rodwell, Timothy<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSD</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/payam.nahid'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=182642&Thumbnail=True&Width=15' width='15' height='30'/></div>Nahid, Payam<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/adithya.cattamanchi'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=176555&Thumbnail=True&Width=15' width='15' height='30'/></div>Cattamanchi, Adithya<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/rada.savic'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=186370&Thumbnail=True&Width=15' width='15' height='30'/></div>Savic, Rada<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> <li> <a href = 'https://profiles.ucsf.edu/patrick.phillips'><div class='thumbnail'><img src = 'https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=188475&Thumbnail=True&Width=15' width='15' height='30'/></div>Phillips, Patrick<span class='researcherprofiles--institution-name-associated-with-researcher'>UCSF</span></a> </li> </ul> </div> <div class="dblarrow"> <a id="ctl00_ContentPassive_rptPassive_ctl03_ctl00_passiveList_ctl06_moreurl" class="prns-explore-btn" href="https://profiles.ucsf.edu/john.metcalfe/202">Explore</a> </div> <div class="passiveSectionLine">_</div> <div class="passiveSectionHead"> <div style="white-space: nowrap; display: inline"> Same Department <!-- <a href="JavaScript:toggleVisibility('sdDescript');"> </a> </div> <div id="sdDescript" class="passiveSectionHeadDescription" style="display: none;"> People who are also in this person's primary department. --> </div> </div> <div class="passiveSectionBody"> <ul> <li><a href='https://researcherprofiles.org/profile/189432'><div class='thumbnail'><img src='https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=189432&Thumbnail=True&Width=15' width='15' height='30'></img></div>Bivona, Trever</a></li> <li><a href='https://researcherprofiles.org/profile/234265502'><div class='thumbnail'><img src='https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=234265502&Thumbnail=True&Width=15' width='15' height='30'></img></div>Espejo, Edie</a></li> <li><a href='https://researcherprofiles.org/profile/188777'><div class='thumbnail'><img src='https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=188777&Thumbnail=True&Width=15' width='15' height='30'></img></div>Kidder, Wes</a></li> <li><a href='https://researcherprofiles.org/profile/32072131'><div class='thumbnail'><img src='https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=32072131&Thumbnail=True&Width=15' width='15' height='30'></img></div>Lesh, Michael</a></li> <li><a href='https://researcherprofiles.org/profile/333395892'><div class='thumbnail'><img src='https://profiles.ucsf.edu/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=333395892&Thumbnail=True&Width=15' width='15' height='30'></img></div>Pearlman, Brittlyn</a></li> </ul> </div> <a href='https://profiles.ucsf.edu/search/default.aspx?searchtype=people&searchfor=&SearchRequest=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' class='dblarrow'>Search Department</a> <div class="passiveSectionLine">_</div> <div id="gadgets-ontology-121"></div><div id="gadgets-tools-121"></div><div id="gadgets-tools-132"></div> </div> </div> </div> </div> </div> <div class="researcherprofiles--footer"> <div id="gadgets-log"></div> <div id="ctl00_MasterPageFooterUCSF"> <div id="researcherprofiles--footer-collaboration"> <p> UCSF Profiles is managed by the UCSF <a href="https://ctsi.ucsf.edu" target="_blank">Clinical and Translational Science Institute (CTSI)</a>, part of the Clinical and Translational Science Award program funded by the National Center for Advancing Translational Sciences (Grant Number UL1 TR000004) at the National Institutes of Health (NIH). </p> <p> We use cookies to operate our website. 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