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GlyConnect Compozitor - SIB Swiss Institute of Bioinformatics | Expasy
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</label> <input id="search" name="search" type="search" required="required" class="field search__input"> <button type="submit" class="btn search__submit"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--search icon--150"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#search"></use></svg></button></div> <div class="text-sm"> e.g. <a href="/search/blast">BLAST</a>, <a href="/search/uniprot">UniProt</a>, <a href="/search/msh6">MSH6</a>, <a href="/search/albumin">Albumin</a>... </div> <!----></form></div> <div class="container"><div class="resource-page"><div class="flex-grid flex-grid--md flex-grid--even"><div class="lg:w-2/3 xl:w-3/4 flex-grid__item w-full"><section class="flex flex-col pt-5 max-md:pb-5 border-neutral-200 border-t"><div class="flex-auto"><div class="mb-3 md:flex md:items-center"><div class="md:flex-1"><h1 class="mb-5"> GlyConnect Compozitor </h1></div> <ul aria-label="Resource categories and types" class="resource-page__filters"><li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="text-primary-500 icon icon--sys-biology icon--150"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <div class="flex-1"> Glycomics </div></li> <li class="resource-page__filter"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--150"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <div class="flex-1"> Software tool </div></li></ul></div> <div class="mb-8">Compozitor queries the GlyConnect database to bring out contextual information relative to a set of glycan compositions (glycome). The tool takes advantage of compositions being related to one another through shared monosaccharide counts and outputs interactive graphs summarising information searched in the database.</div> <div class="flex flex-col items-start gap-8 lg:items-center lg:gap-12 lg:flex-row"><div class="flex items-start justify-center lg:justify-start"><a href="https://glyconnect.expasy.org/compozitor/" target="_blank" rel="noopener noreferer" class="btn btn--primary"> Browse the resource website </a></div> <div class="flex flex-col items-start gap-3"><!----> <!----> <!----></div></div></div> <footer class="p-5 resource-page__info bg-neutral-100 border-neutral-200 border-t border-b"><div><p>Developed by the <a href="https://www.sib.swiss/frederique-lisacek-group" rel="noopener noreferrer nofollow">Proteome Informatics group</a>.</p></div> This resource is released under a Creative Commons Attribution International license <a href="https://creativecommons.org/licenses/by/4.0/" target="_blank" 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lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glys3" class="resource__link"><h3 class="h5"> GlyS3 </h3></a> <div class="text-sm leading-snug mt-1"> Match a glycan substructure to a database of full structures </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glynsight" class="resource__link"><h3 class="h5"> Glynsight </h3></a> <div class="text-sm leading-snug mt-1"> Visualise and compare glycan expression profiles </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glydin" class="resource__link"><h3 class="h5"> Glydin' </h3></a> <div class="text-sm leading-snug mt-1"> Network representation of known glycan determinants </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycositealign" class="resource__link"><h3 class="h5"> GlycoSiteAlign </h3></a> <div class="text-sm leading-snug mt-1"> Multiple alignment of sequences around glycosylation sites </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect" class="resource__link"><h3 class="h5"> GlyConnect </h3></a> <div class="text-sm leading-snug mt-1"> Integrated data platform to study glycosylation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycodigest" class="resource__link"><h3 class="h5"> GlycoDigest </h3></a> <div class="text-sm leading-snug mt-1"> In silico digestion of glycans by exoglycosidases </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/epitopextractor" class="resource__link"><h3 class="h5"> EpitopeXtractor </h3></a> <div class="text-sm leading-snug mt-1"> Compare glycan structures to Glydin' network's collection </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/glycomod" class="resource__link"><h3 class="h5"> GlycoMod </h3></a> <div class="text-sm leading-snug mt-1"> Possible oligosaccharide structures on proteins from masses </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Database </li></ul></li></ul></div></div> <a href="/resources/glyco-expasy" class="resource__link"><h3 class="h5"> Glyco@Expasy </h3></a> <div class="text-sm leading-snug mt-1"> Zooming in on web-based glycoinformatics resources </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Systems Biology </li><li class="inline-block sr-only"><span>, </span> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/hmo-glycologue" class="resource__link"><h3 class="h5"> HMO-Glycologue </h3></a> <div class="text-sm leading-snug mt-1"> Simulator of Human Milk Oligosaccharide synthesis </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Database </li></ul></li></ul></div></div> <a href="/resources/glyconnect-sparql-endpoint" class="resource__link"><h3 class="h5"> GlyConnect SPARQL endpoint </h3></a> <div class="text-sm leading-snug mt-1"> SPARQL access to GlyConnect </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Database </li></ul></li></ul></div></div> <a href="/resources/gag-db" class="resource__link"><h3 class="h5"> GAG-DB </h3></a> <div class="text-sm leading-snug mt-1"> 3D structures of glycosaminoglycans </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--tool icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#tool"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Software tool </li></ul></li></ul></div></div> <a href="/resources/mzjava" class="resource__link"><h3 class="h5"> MzJava </h3></a> <div class="text-sm leading-snug mt-1"> Open source Java class library to process MS fragmentation </div></article></li><li class="sm:w-1/2 md:w-1/2 lg:w-1/3 xl:w-1/4 flex-grid__item w-full"><article class="resource"><div class="flex items-center mb-3"><div class="flex-1 text-primary-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--protein icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#protein"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Proteins & Proteomes </li></ul></li><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--sys-biology icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#sys-biology"></use></svg> <ul aria-label="Resource Categories"><li class="inline-block sr-only"><!----> Glycomics </li></ul></li></ul></div> <div class="text-neutral-500"><ul><li class="inline-block mr-2 last:mr-0"><svg aria-hidden="true" focusable="false" role="img" class="icon icon--db icon--125"><!----> <use xlink:href="/_nuxt/img/icons.2l2yMrcx.svg#db"></use></svg> <ul aria-label="Resource Types"><li class="inline-block sr-only"><!----> Database 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fragmentation","2021-01-21T13:54:00.000000Z","2024-08-22T12:12:27.000000Z",558,"UniLectin","unilectin","https:\u002F\u002Funilectin.unige.ch\u002F","https:\u002F\u002Funilectin.unige.ch\u002Fpages\u002Fabout","Structural and functional classification of lectins","2020-06-22T12:10:25.000000Z","2024-11-26T12:17:59.000000Z","https:\u002F\u002Fprosite.expasy.org\u002Fprosite_license.html","PROSITE license","2020-07-16T11:36:48.000000Z","2022-04-14T10:30:04.000000Z","https:\u002F\u002Fwww.bgee.org\u002Fsupport\u002Ftutorials","2024-03-01T14:11:56.000000Z","https:\u002F\u002Fwww.uniprot.org\u002Fhelp\u002Ftechnical","pftools","rawrr","https:\u002F\u002Fswissmodel.expasy.org\u002F","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Fhelp","https:\u002F\u002Fswissmodel.expasy.org\u002Fdocs\u002Ftutorial","MHC Motif Atlas","fastsimcoal","https:\u002F\u002Fmyhits.sib.swiss\u002Fcgi-bin\u002Fhelp"));</script><script src="/_nuxt/734f39f.js" defer></script><script src="/_nuxt/64c1a2c.js" 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