galah

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}"> <span class="navbar-toggler-icon"></span> </button> <div class="collapse navbar-collapse" id="navbarCollapse"> <ul class="navbar-nav navbar-nav-scroll ms-auto"> <li class="nav-item"> <a class="nav-link" href="http://galah.ala.org.au/R" rel="" target=""> <span class="menu-text">R package</span></a> </li> <li class="nav-item"> <a class="nav-link" href="https://galah.ala.org.au/Python" rel="" target=""> <span class="menu-text">Python package</span></a> </li> <li class="nav-item compact"> <a class="nav-link" href="https://www.ala.org.au" rel="" target=""><i class="bi bi-ala" role="img"> </i> <span class="menu-text"></span></a> </li> </ul> <div class="quarto-navbar-tools"> </div> </div>  </div>  </nav> </header>  <div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-full page-navbar">    <main class="content page-columns page-full column-body" id="quarto-document-content"> <div class="column-screen page-columns page-full" style="background-color: #FFFFFF; padding-top: 50px; margin-top: -4vh"> <div class="column-page quarto-layout-panel" style="float:left; background-color: #FFFFFF;"> <div class="quarto-layout-row quarto-layout-valign-top"> <div class="cell quarto-layout-cell" style="flex-basis: 50.0%;justify-content: center;"> <div class="cell-output-display"> <div class="quarto-figure quarto-figure-center" style=""> <figure class="figure"> <p><img src="https://raw.githubusercontent.com/AtlasOfLivingAustralia/ala-labs/main/images/hex/galah_logo.png" class="quarto-discovered-preview-image img-fluid figure-img" width="400"></p> </figure> </div> </div> </div> <section id="galah" class="level1 quarto-layout-cell" style="flex-basis: 50.0%;justify-content: center;"> <h1>galah</h1> <p>galah is an interface to biodiversity data hosted by the <a href="https://ala.org.au/">Atlas of Living Australia (ALA)</a>. It enables users to locate and download species occurrence records (observations, specimens, eDNA records, etc.), taxonomic information, or associated media such as images or sounds, and to restrict their queries to particular taxa or locations.<br><br> If you have any questions, comments, or spot any bugs, <a href="mailto:support@ala.org.au">email us</a> or <a href="https://github.com/AtlasOfLivingAustralia/galah">report an issue</a> on our GitHub page</p> </section> </div> </div> </div> <div class="column-screen page-columns page-full"> <div class="column-page" style="padding-top: 30px;"> <div class="grid"> <div class="g-col-lg-6 g-col-12"> <div class="cell"> <div class="cell-output-display"> <div class="button-column"> <a href="http://galah.ala.org.au/R" style="border-bottom: none"> <button class="button-web">R</button> </a> </div> </div> </div> <div class="sourceCode" id="cb1"><pre class="sourceCode markdown code-with-copy"><code class="sourceCode markdown"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="in">```{r}</span></span> <span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="fu">library</span>(galah)</span> <span id="cb1-3"><a href="#cb1-3" aria-hidden="true" tabindex="-1"></a></span> <span id="cb1-4"><a href="#cb1-4" aria-hidden="true" tabindex="-1"></a><span class="fu">galah_call</span>() <span class="sc">|></span></span> <span id="cb1-5"><a href="#cb1-5" aria-hidden="true" tabindex="-1"></a> <span class="fu">identify</span>(<span class="st">"reptilia"</span>, <span class="st">"mammalia"</span>) <span class="sc">|></span></span> <span id="cb1-6"><a href="#cb1-6" aria-hidden="true" tabindex="-1"></a> <span class="fu">filter</span>(year <span class="sc">></span> <span class="dv">2019</span>) <span class="sc">|></span></span> <span id="cb1-7"><a href="#cb1-7" aria-hidden="true" tabindex="-1"></a> <span class="fu">group_by</span>(order) <span class="sc">|></span></span> <span id="cb1-8"><a href="#cb1-8" aria-hidden="true" tabindex="-1"></a> <span class="fu">atlas_counts</span>()</span> <span id="cb1-9"><a href="#cb1-9" aria-hidden="true" tabindex="-1"></a><span class="in">```</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div> <div class="cell"> <div class="cell-output cell-output-stdout"> <pre><code># A tibble: 18 × 2 order count <chr> <int> 1 Diprotodontia 209587 2 Squamata 100601 3 Peramelemorphia 63989 4 Rodentia 49891 5 Chiroptera 35437 6 Carnivora 28522 7 Lagomorpha 22020 8 Artiodactyla 18268 9 Monotremata 18072 10 Dasyuromorphia 17703 11 Testudines 11402 12 Crocodylia 8456 13 Cetacea 3748 14 Perissodactyla 819 15 Sirenia 51 16 Insectivora 13 17 Primates 1 18 Rhynchocephalia 1</code></pre> </div> </div> </div> <div class="g-col-lg-6 g-col-12"> <div class="cell"> <div class="cell-output-display"> <div class="button-column"> <a href="http://galah.ala.org.au/Python" style="border-bottom: none"> <button class="button-web">Python</button> </a> </div> </div> </div> <div class="sourceCode" id="cb3"><pre class="sourceCode markdown code-with-copy"><code class="sourceCode markdown"><span id="cb3-1"><a href="#cb3-1" aria-hidden="true" tabindex="-1"></a><span class="in">```{python}</span></span> <span id="cb3-2"><a href="#cb3-2" aria-hidden="true" tabindex="-1"></a><span class="im">import</span> galah</span> <span id="cb3-3"><a href="#cb3-3" aria-hidden="true" tabindex="-1"></a></span> <span id="cb3-4"><a href="#cb3-4" aria-hidden="true" tabindex="-1"></a>galah.atlas_counts(</span> <span id="cb3-5"><a href="#cb3-5" aria-hidden="true" tabindex="-1"></a> taxa <span class="op">=</span> [<span class="st">"reptilia"</span>,<span class="st">"mammalia"</span>],</span> <span id="cb3-6"><a href="#cb3-6" aria-hidden="true" tabindex="-1"></a> filters <span class="op">=</span> <span class="st">"year>2019"</span>,</span> <span id="cb3-7"><a href="#cb3-7" aria-hidden="true" tabindex="-1"></a> group_by <span class="op">=</span> <span class="st">"order"</span></span> <span id="cb3-8"><a href="#cb3-8" aria-hidden="true" tabindex="-1"></a>)</span> <span id="cb3-9"><a href="#cb3-9" aria-hidden="true" tabindex="-1"></a><span class="in">```</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div> <div class="cell"> <div class="cell-output cell-output-stdout"> <pre><code> order count 0 Artiodactyla 18268 1 Carnivora 28522 2 Cetacea 3748 3 Chiroptera 35437 4 Crocodylia 8456 5 Dasyuromorphia 17703 6 Diprotodontia 209587 7 Insectivora 13 8 Lagomorpha 22020 9 Monotremata 18072 10 Peramelemorphia 63989 11 Perissodactyla 819 12 Primates 1 13 Rhynchocephalia 1 14 Rodentia 49891 15 Sirenia 51 16 Squamata 100601 17 Testudines 11402</code></pre> </div> </div> </div> </div> </div> </div> </main>  <script id="quarto-html-after-body" type="application/javascript"> 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