Plant and Seed Research – Sustainable Agriculture

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Healthier crops. Faster variety development. Improved quality control.</h2> <p><strong>Unlock the genotyping, pathogen detection and quality control answers your breeding program depends on.</strong></p> <p>The Biomark™ X9 System for High-Throughput Genomics delivers cost-effective, comprehensive and scalable sample profiling for PCR and genotyping by sequencing (GBS) studies with minimal operator contribution on a completely new platform.</p> <p style="margin-top:24px;"><a class="primary-btn" href="https://www.standardbio.com/plant-and-seed-research-contact-us">Show me how</a></p> </div> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_jump-links pimcore_area_content "> <div class="jump-links-container"> <div class="jump-links bg-very-light-gray w-100"> <div class="container"> <div class="row"> <div class="col d-flex align-items-center overflow-auto py-4"> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#overview-anchor" data-anchor-link="overview-anchor">Overview</a> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#applications-anchor" data-anchor-link="applications-anchor">Applications</a> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#workflow-anchor" data-anchor-link="workflow-anchor">Workflow</a> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#panels-anchor" data-anchor-link="panels-anchor">Panels</a> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#faqs-anchor" data-anchor-link="faqs-anchor">FAQs</a> <a class="font-15 fw-bold font-proxima-nova link-no-style color-primary-gray jump-link" href="#contact-anchor" data-anchor-link="contact-anchor">Contact Us</a> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_container pimcore_area_content "> <div id="-anchor" class="py-5 bg-very-light-gray"> <div class="container"> <div class="row"> <div class="col"> <div class="pimcore_area_wysiwyg pimcore_area_content "> <div id="-anchor" class="row area-wysiwyg"> <div class="col"> <div class="container"> <div class="row row-cols-1 row-cols-lg-2 g-4"> <div class="col px-4"><script src="https://fast.wistia.com/embed/medias/al1hjujhrj.jsonp" async></script><script src="https://fast.wistia.com/assets/external/E-v1.js" async></script> <div class="wistia_responsive_padding" style="padding:56.25% 0 0 0;position:relative;"> <div class="wistia_responsive_wrapper" style="height:100%;left:0;position:absolute;top:0;width:100%;"> <div class="wistia_embed wistia_async_al1hjujhrj seo=false videoFoam=true" style="height:100%;position:relative;width:100%"> <div class="wistia_swatch" style="height:100%;left:0;opacity:0;overflow:hidden;position:absolute;top:0;transition:opacity 200ms;width:100%;"><img alt="" aria-hidden="true" onload="this.parentNode.style.opacity=1;" src="https://fast.wistia.com/embed/medias/al1hjujhrj/swatch" style="filter:blur(5px);height:100%;object-fit:contain;width:100%;" /></div> </div> </div> </div> </div> <div class="col px-4 bg-white"> <div class="h-100" style="display:flex; flex-direction:column; justify-content: center;"> <h2 class="color-secondary-blue">Quickly go from discovery to impact</h2> <p>High-throughput screening of 100s—1000s of samples and genomic targets supports trait selection, determines parentage, predicts migration patterns and identifies pathogens. Biomark X9 offers complete genomic solutions at a lower cost, enabling faster time to decisions supporting crop yield, pest management, pathogen resistance, stress tolerance and other process improvements.</p> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_container pimcore_area_content "> <div id="overview-anchor" class="py-5 "> <div class="container"> <div class="row"> <div class="col"> <div class="pimcore_area_wysiwyg pimcore_area_content "> <div id="-anchor" class="row area-wysiwyg"> <div class="col"> <div class="bg-grad-blue" style="padding:20px;"> <div class="pimcore_area_highlights pimcore_area_content "> <div class="row g-4 row-cols-1 row-cols-lg-4 pb-5" style="padding-bottom: 0px !important;"> <div class="col"> <div class="bg-grad-blue rounded py-2 px-3 h-100" style="text-align: center;"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <h4><span style="color:#ffffff;">Faster QTL<br /> processing</span></h4> </td> </tr> </tbody> </table> <hr style="border:1px solid #ffffff;" /> <p><span style="color:#ffffff;">Utilize the Biomark X9™ System to identify genetic markers linked to disease resistance, growth and desirable traits by processing up to 192 samples or markers concurrently.</span></p> </div> </div> <div class="col"> <div class="bg-grad-blue rounded py-2 px-3 h-100" style="text-align: center;"> <h4><span style="color:#ffffff;">Food safety and<br /> traceability</span></h4> <hr style="border:1px solid #ffffff;" /> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <p><span style="color:#ffffff;">Ensure the authenticity and traceability of all your seeds with rapid and scalable testing methods adaptable to different harvesting seasons.</span></p> </td> </tr> </tbody> </table> </td> </tr> </tbody> </table> </div> </div> <div class="col"> <div class="bg-grad-blue rounded py-2 px-3 h-100" style="text-align: center;"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <h4><span style="color:#ffffff;">Disease<br /> management</span></h4> </td> </tr> </tbody> </table> <hr style="border:1px solid #ffffff;" /> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <p><span style="color:#ffffff;">Identify asymptomatic diseases and pathogens quickly with molecular markers for viroids, bacteria, fungi and more.</span></p> </td> </tr> </tbody> </table> </td> </tr> </tbody> </table> </div> </div> <div class="col"> <div class="bg-grad-blue rounded py-2 px-3 h-100" style="text-align: center;"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <h4><span style="color:#ffffff;"><b>Tailored molecular assays for your workflow</b></span></h4> </td> </tr> </tbody> </table> <hr style="border:1px solid #ffffff;" /> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <table border="1" cellpadding="0" cellspacing="0"> <tbody> <tr> <td valign="top" width="25%"> <p><span style="color:#ffffff;">Customize assays for molecular-assisted breeding or QC workflows for your specific needs, then adjust assay targets and sample batch sizes on the go: Assays are not fixed or pre-spotted, so can be modified any time as needed.</span></p> </td> </tr> </tbody> </table> </td> </tr> </tbody> </table> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_workflow pimcore_area_content "> </div> <div class="pimcore_area_workflow pimcore_area_content "> </div> <div class="pimcore_area_container pimcore_area_content "> <div id="casestudies-anchor" class="py-5 "> <div class="container"> <div class="row"> <div class="col"> <div class="pimcore_area_wysiwyg pimcore_area_content "> <div id="-anchor" class="row area-wysiwyg"> <div class="col"> <style type="text/css">.plant-icon-row {width:100%;flex-wrap:wrap;}.plant-icon-row div {width: 10%; height:60px; justify-content:center; align-items:center; display:flex; } .plant-icon-row div img { max-height:80%; } </style> <div class="sidebysideContainer g-4"> <div class="Width50 px-4" style="margin-top:24px;"> <h2 style="font-size:2rem; line-height: 2.5rem; margin-bottom:24px;"><span class="color-secondary-blue">GO beyond the surface -<br /> only with the Biomark X9 system</span></h2> <div class="plant-icon-row" style="display:flex; align-items:center; justify-content: flex-start; gap:2em; margin-bottom:24px;"> <div><img alt="flower icon" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/icon_flower_blue.svg" /></div> <div><img alt="cabbage icon" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/icon_cabbage_blue.svg" /></div> <div><img alt="grapes icon" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/icon_grapes_blue.svg" /></div> <div><img alt="rice icon" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/icon_rice_blue.svg" /></div> <div><img alt="watermelon icon" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/icon_watermelon_blue.svg" style="max-height:60%;" /></div> </div> <p class="bg-very-light-gray" style="padding:1em 2em;">Move the slider to the left on the images below to find out what you can see beyond the surface with the Biomark X9 System.</p> </div> <div class="Width50 px-4"> <div style="text-align: center; margin-top:10px;"><img-comparison-slider class="slider-with-animated-handle slider-example-split-line"> <img slot="first" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/sliderComparison_flower_v3.webp" 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src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/sliderComparison_rice_v3.webp" style="width:100%;" /> <img slot="second" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/sliderComparison_rice_traced_v3.webp" style="width:100%;" /> <svg class="custom-animated-handle" slot="handle" viewbox="-8 -3 16 6" width="100" xmlns="http://www.w3.org/2000/svg"> <path d="M -5 -2 L -7 0 L -5 2 M -5 -2 L -5 2 M 5 -2 L 7 0 L 5 2 M 5 -2 L 5 2" fill="#fff" stroke="#fff" stroke-width="1" vector-effect="non-scaling-stroke"></path> </svg> </img-comparison-slider><br /> <br /> <a class="primary-btn-purple" href="/rice-case-study-form">VIEW RICE CASE STUDIES</a></div> <p> </p> </div> <div class="Width50 px-4"> <div style="text-align: center; margin-top:10px;"><img-comparison-slider class="slider-with-animated-handle slider-example-split-line"> <img slot="first" src="/FluidigmSite_Assets/Area_of_Interest/Plant_And_Seed_Research/sliderComparison_watermelon_v3.webp" 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auto;padding: 0 0 39.06%;height: 0;top: 0;left: 0;bottom: 0;right: 0;margin: 0;border: 0 none"><iframe allowfullscreen="" class="ceros-experience" frameborder="0" scrolling="no" src="https://view.ceros.com/somalogic/aquaculture-streamlined-workflow-4-1" style="position: absolute;top: 0;left: 0;bottom: 0;right: 0;margin: 0;padding: 0;border: 0 none;height: 1px;width: 1px;min-height: 100%;min-width: 100%" title="Plant And Seed Research Workflow Carousel"></iframe></div> <script type="text/javascript" src="https://view.ceros.com/scroll-proxy.min.js" data-ceros-origin-domains="view.ceros.com"></script> </div> </div> </div> <div class="pimcore_area_wysiwyg pimcore_area_content "> <div id="-anchor" class="row area-wysiwyg"> <div class="col"> <div class="bg-very-light-gray p-4" style="margin-top:60px;"> <div data-aspectratio="3.77142857" id="experience-66a94ccad02aa" style="position: relative;width: auto;padding: 0 0 26.52%;height: 0;top: 0;left: 0;bottom: 0;right: 0;margin: 0;border: 0 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d-flex flex-column justify-content-center orange-list-items"> <style type="text/css">.bg-magenta-alt { background-image: none; } </style> <h2><b>CHOOSE THE PANEL THAT MATTERS</b></h2> <hr style="border:1px solid #ffffff;" /> <p>Whether performing QTL analysis for rice or detecting host-pathogen interactions of your plants of interest, design your panel of choice with our free D3™ software suite.</p> <div class="primary-btn-alt mt-3"> <a href="/services/tools/d3-assay-design" class="align-self-start" type="internal">Learn More</a> </div> </div> <div class="d-none d-lg-block col-lg-3"></div> <div class="d-none d-lg-flex col-12 col-lg-3 justify-content-center align-items-center"> <picture data-alt="" data-default-src="/FluidigmSite_Assets/PrdSrv-Tech_Microfluidics/Images/image-thumb__13353__medium-circle_auto_ac2671116d4f82a5acb0631b7d2612b7/MF_D3_ifc_Chip.png"> <source 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auto;padding: 0 0 41.67%;height: 0;top: 0;left: 0;bottom: 0;right: 0;margin: 0;border: 0 none"><iframe allowfullscreen="" class="ceros-experience" frameborder="0" scrolling="no" src="https://view.ceros.com/somalogic/sbi-home-products-1-2-1" style="position: absolute;top: 0;left: 0;bottom: 0;right: 0;margin: 0;padding: 0;border: 0 none;height: 1px;width: 1px;min-height: 100%;min-width: 100%" title="Plants and Seeds X9"></iframe></div> <script type="text/javascript" src="https://view.ceros.com/scroll-proxy.min.js" data-ceros-origin-domains="view.ceros.com"></script> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_accordion pimcore_area_content "> <div id="faqs-anchor" class="accordion-brick"> <div class="container py-5"> <div class="row"> <div class="col"> <div class="accordion accordion-flush accordion-wrapper" id="accordion-wrapper"> <div class="accordion-item"> <h2 class="accordion-header" id="accordion-header-accordion-12-item-9"> <button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#accordion-collapse-accordion-12-item-9" aria-expanded="true" aria-controls="accordion-collapse-accordion-12-item-9"> <div class="d-flex flex-column "> <div class="font-24 color-grad-blue fw-bold text-uppercase fw-600">FREQUENTLY ASKED QUESTIONS</div> <div class="small-p font-20 fw-500">Can the system be used to perform GBS experiments on different plant species?</div> </div> </button> </h2> <div id="accordion-collapse-accordion-12-item-9" class="accordion-collapse collapse" aria-labelledby="accordion-header-accordion-12-item-9"> <div class="accordion-body"> <div class="row"> <div class="col-12 col-lg-4 mb-3"> <picture data-alt="" data-default-src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png"> <source srcset="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png 1x, /FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite@2x.png 2x" type="image/png" /> <img class="img-fluid" alt="" title="" src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png" /> </picture> </div> <div class="col-12 col-lg-8 drop-cap"> <div><h7></h7> <p>Yes, the Biomark X9 System can perform amplicon-based GBS experiments for up to 4,800 targets simultaneously on 48 samples, or even perform whole-transcriptome RNA-seq assays.</p> <p><a class="primary-btn-purple" href="https://www.mdpi.com/2073-4425/11/10/1220" target="_blank">Read the paper</a></p> </div> </div> </div> </div> </div> </div> <div class="accordion-item"> <h2 class="accordion-header" id="accordion-header-accordion-12-item-10"> <button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#accordion-collapse-accordion-12-item-10" aria-expanded="true" aria-controls="accordion-collapse-accordion-12-item-10"> <div class="d-flex flex-column "> <div class="font-24 color-grad-blue fw-bold text-uppercase fw-600"></div> <div class="small-p font-20 fw-500">Can the Biomark X9 System be integrated with liquid-handling robots to automate the entire sample preparation process?</div> </div> </button> </h2> <div id="accordion-collapse-accordion-12-item-10" class="accordion-collapse collapse" aria-labelledby="accordion-header-accordion-12-item-10"> <div class="accordion-body"> <div class="row"> <div class="col-12 col-lg-4 mb-3"> <picture data-alt="" data-default-src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png"> <source srcset="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png 1x, /FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite@2x.png 2x" type="image/png" /> <img class="img-fluid" alt="" title="" src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png" /> </picture> </div> <div class="col-12 col-lg-8 drop-cap"> <div><h7></h7> <p>Yes, the system can be integrated with a variety of different liquid-handling robots, including the mosquito® HV (by SPT Labtech), the ASSIST PLUS (by Integra Biosciences) and many more.</p> <p><a class="primary-btn-purple" href="https://videos.sis.standardbio.com/watch/buAXWQ9itdHoaCV8DWvYKU" target="_blank"><b>See an example</b></a><b> </b></p> </div> </div> </div> </div> </div> </div> <div class="accordion-item"> <h2 class="accordion-header" id="accordion-header-accordion-12-item-11"> <button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#accordion-collapse-accordion-12-item-11" aria-expanded="true" aria-controls="accordion-collapse-accordion-12-item-11"> <div class="d-flex flex-column "> <div class="font-24 color-grad-blue fw-bold text-uppercase fw-600"></div> <div class="small-p font-20 fw-500">Do I have to replace my entire library of PCR probes to use the Biomark X9 System?</div> </div> </button> </h2> <div id="accordion-collapse-accordion-12-item-11" class="accordion-collapse collapse" aria-labelledby="accordion-header-accordion-12-item-11"> <div class="accordion-body"> <div class="row"> <div class="col-12 col-lg-4 mb-3"> <picture data-alt="" data-default-src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png"> <source srcset="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png 1x, /FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite@2x.png 2x" type="image/png" /> <img class="img-fluid" alt="" title="" src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png" /> </picture> </div> <div class="col-12 col-lg-8 drop-cap"> <div><h7></h7> <p>No, the Biomark X9 System works with our proprietary SNP Type™ chemistry but is also compatible with a variety of other chemistries, including TaqMan™, KASPar, PACE® and more.</p> <p><a class="primary-btn-purple" href="https://academic.oup.com/hr/article/doi/10.1038/s41438-020-00411-z/6445710" target="_blank"><b>Read an example</b></a></p> </div> </div> </div> </div> </div> </div> <div class="accordion-item"> <h2 class="accordion-header" id="accordion-header-accordion-12-item-12"> <button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#accordion-collapse-accordion-12-item-12" aria-expanded="true" aria-controls="accordion-collapse-accordion-12-item-12"> <div class="d-flex flex-column "> <div class="font-24 color-grad-blue fw-bold text-uppercase fw-600"></div> <div class="small-p font-20 fw-500">Do I have to revalidate or reorder a whole new panel if I need to modify my experimental setup?</div> </div> </button> </h2> <div id="accordion-collapse-accordion-12-item-12" class="accordion-collapse collapse" aria-labelledby="accordion-header-accordion-12-item-12"> <div class="accordion-body"> <div class="row"> <div class="col-12 col-lg-4 mb-3"> <picture data-alt="" data-default-src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png"> <source srcset="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png 1x, /FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite@2x.png 2x" type="image/png" /> <img class="img-fluid" alt="" title="" src="/FluidigmSite_Assets/Generic-Assets/Images/Icons-Misc/image-thumb__13789__medium-circle/Icon_Q%26A_BlueOutlineonWhite.png" /> </picture> </div> <div class="col-12 col-lg-8 drop-cap"> <div><h7></h7> <p>No, since our assays are not fixed or pre-spotted, they can be modified any time as needed. You can add, remove or modify any of the existing assays simply by replacing them at your leisure.</p> <p><a class="primary-btn-purple jump-link" href="#resources-anchor" target="_blank">Listen to our customers to learn how</a></p> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_container pimcore_area_content "> <div id="contact-anchor" class="py-5 "> <div class="container"> <div class="row"> <div class="col"> <div class="pimcore_area_wysiwyg pimcore_area_content "> <div id="-anchor" class="row area-wysiwyg"> <div class="col"> <div class="bg-grad-blue p-5"> <h2 style="color:white; text-align:center;">Ready to learn more?</h2> <p style="text-align:center; margin-top:20px;"><a class="primary-btn" href="/plant-and-seed-research-contact-us">Talk with us</a></p> </div> </div> </div> </div> </div> </div> </div> </div> </div> <div class="pimcore_area_snippets pimcore_area_content "> <div class="container py-5"> <div class="row"> <div class="col-12"> <h1 class="py-0"> </h1> <div> <p><strong>For Research Use Only. 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