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<!DOCTYPE html> <html class="writer-html5" lang="en"> <head> <meta charset="utf-8" /> <meta name="viewport" content="width=device-width, initial-scale=1.0" /> <title>MPCDF Technical Documentation — Technical Documentation</title> <link rel="stylesheet" type="text/css" href="_static/pygments.css" /> <link rel="stylesheet" type="text/css" href="_static/css/theme.css" /> <link rel="stylesheet" type="text/css" href="_static/copybutton.css" /> <link rel="stylesheet" type="text/css" href="_static/custom.css" /> <link rel="shortcut icon" href="_static/favicon.ico"/>  <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script> <script src="_static/jquery.js"></script> <script src="_static/underscore.js"></script> <script src="_static/_sphinx_javascript_frameworks_compat.js"></script> <script src="_static/doctools.js"></script> <script src="_static/sphinx_highlight.js"></script> <script src="_static/clipboard.min.js"></script> <script src="_static/copybutton.js"></script> <script src="_static/js/theme.js"></script> <link rel="index" title="Index" href="genindex.html" /> <link rel="search" title="Search" href="search.html" /> <link rel="next" title="Frequently Asked Questions" href="faq/index.html" /> </head> <body class="wy-body-for-nav"> <div class="wy-grid-for-nav"> <nav data-toggle="wy-nav-shift" class="wy-nav-side"> <div class="wy-side-scroll"> <div class="wy-side-nav-search" style="background: #EEEEEE" > <a href="https://www.mpcdf.mpg.de"> <img src="_static/mpcdflogo.png" class="logo" alt="Logo"/> </a> <div role="search"> <form id="rtd-search-form" class="wy-form" action="search.html" method="get"> <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" /> <input type="hidden" name="check_keywords" value="yes" /> <input type="hidden" name="area" value="default" /> </form> </div> </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu"> <ul> <li class="toctree-l1"><a class="reference internal" href="faq/index.html">Frequently Asked Questions</a><ul> <li class="toctree-l2"><a class="reference internal" href="faq/account.html">Account registration</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/connecting.html">Connecting</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/connecting.html#how-can-i-log-into-the-machines-at-the-mpcdf">How can I log into the machines at the MPCDF?</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#what-are-the-gateway-machines-for-ssh-login">What are the gateway machines for SSH login?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#two-factor-authentication-2fa">Two-factor authentication (2FA)</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#are-ssh-keys-supported">Are SSH keys supported?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#can-ssh-scp-sftp-performance-be-improved">Can ssh/scp/sftp performance be improved?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#i-get-a-ssh-security-warning-about-a-host-key-change-when-trying-to-log-in-what-does-this-mean-and-what-should-i-do">I get a SSH security warning about a host key change when trying to log in. What does this mean and what should I do?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/connecting.html#how-can-i-run-applications-with-graphical-user-interfaces-on-mpcdf-systems">How can I run applications with graphical user interfaces on MPCDF systems?</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#x11-forwarding">X11 forwarding</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#vnc">VNC</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/connecting.html#remote-visualization-service">Remote Visualization Service</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="faq/2fa.html">Two-factor authentication (2FA)</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#general-information-about-2fa">General information about 2FA</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#do-i-need-to-enable-2fa">Do I need to enable 2FA?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#do-i-already-have-2fa-activated">Do I already have 2FA activated?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#why-is-2fa-enforced">Why is 2FA enforced?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#what-is-a-token-otp-and-seed">What is a token, OTP, and seed?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#what-kinds-of-tokens-are-there">What kinds of tokens are there?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#why-am-i-asked-for-an-otp">Why am I asked for an OTP?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#activation-of-2fa">Activation of 2FA</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-do-i-enable-2fa">How do I enable 2FA?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-do-i-enroll-and-use-an-app-token">How do I enroll and use an app token?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#what-app-do-i-need-to-install">What app do I need to install?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-do-i-register-my-existing-token">How do I register my existing token?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-do-i-enroll-and-use-a-secondary-backup-token">How do I enroll and use a secondary/backup token?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#why-can-t-i-have-both-an-app-token-and-a-hardware-token">Why can’t I have both an app token and a hardware token?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#fa-tips-and-tricks">2FA Tips and Tricks</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#do-i-have-to-type-in-an-otp-every-time-i-access-the-secured-systems">Do I have to type in an OTP every time I access the secured systems?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#fa-troubleshooting">2FA Troubleshooting</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#i-need-to-factory-reset-my-phone-how-can-i-preserve-my-app-token">I need to factory-reset my phone. How can I preserve my app token?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-do-i-transfer-my-token-to-a-new-phone">How do I transfer my token to a new phone?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#i-can-t-validate-activate-the-token-i-just-scanned-wrong-otp">I can’t validate/activate the token I just scanned (“Wrong OTP”)</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#i-can-t-log-in-to-the-selfservice-anymore">I can’t log in to the SelfService anymore</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#i-can-t-log-in-to-a-gate-machine-via-ssh">I can’t log in to a gate machine via SSH</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#i-can-t-access-the-hpc-clusters-through-vnc-anymore">I can’t access the HPC clusters through VNC anymore</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#hardware-and-client-support">Hardware and client support</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-can-i-use-my-sshfs-rsync-scp-sftp-gui-with-2fa">How can I use my sshfs/rsync/scp/sftp GUI with 2FA?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-can-i-use-filezilla-with-2fa">How can I use FileZilla with 2FA?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#how-to-use-2fa-on-a-phone-with-a-time-shift">How to use 2FA on a phone with a time shift?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#do-you-or-are-you-planning-to-support-fido2-u2f-yubikeys">Do you or are you planning to support FIDO2/U2F/YubiKeys?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/2fa.html#on-security">On security</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#if-the-seed-is-stored-on-the-server-how-secure-is-it">If the seed is stored on the server, how secure is it?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/2fa.html#where-do-the-hardware-tokens-come-from-does-the-vendor-know-the-seeds">Where do the hardware tokens come from? Does the vendor know the seeds?</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="faq/hpc_software.html">HPC Software and Applications</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#general-questions">General questions</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-and-where-can-i-install-software-myself">How and where can I install software myself?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#environment-modules">Environment modules</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-use-environment-modules-interactively">How can I use environment modules interactively?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-use-environment-modules-in-scripts">How can I use environment modules in scripts?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-use-environment-modules-to-avoid-absolute-paths-in-my-scripts">How can I use environment modules to avoid absolute paths in my scripts?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#examples">Examples</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-do-the-hierarchical-environment-modules-work">How do the hierarchical environment modules work?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-do-i-quickly-find-a-module">How do I quickly find a module?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-disable-the-mpcdf-specific-note-for-module-avail">How can I disable the “MPCDF specific note” for <code class="docutils literal notranslate"><span class="pre">module</span> <span class="pre">avail</span></code>?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#why-there-are-no-blas-lapack-modules-available-on-the-clusters">Why there are no BLAS/LAPACK modules available on the clusters?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#compiled-languages">Compiled Languages</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#cmake">CMake</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#c-c-and-fortran">C/C++ and Fortran</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#debugging-of-c-c-and-fortran-codes">Debugging of C/C++ and Fortran codes</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#interpreted-languages">Interpreted Languages</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#python">Python</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#r">R</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#julia">Julia</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#jupyter-notebooks">Jupyter Notebooks</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#matlab">MATLAB</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#message-passing-interface-mpi-libraries-and-runtimes">Message Passing Interface (MPI) Libraries and Runtimes</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#which-mpi-implementations-are-supported">Which MPI implementations are supported?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-compile-and-link-my-mpi-application">How can I compile and link my MPI application?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#cmake-cannot-find-mpi-what-can-i-do">CMake cannot find MPI, what can I do?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#i-cannot-launch-my-mpi-code-using-mpirun-what-am-i-doing-wrong">I cannot launch my MPI code using <code class="docutils literal notranslate"><span class="pre">mpirun</span></code>, what am I doing wrong?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#visualization">Visualization</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-combine-many-image-files-jpg-png-into-a-movie-mp4">How can I combine many image files (JPG, PNG) into a movie (MP4)?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#how-can-i-install-additional-packages-for-tex-latex-locally">How can I install additional packages for TeX/LaTeX locally?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_software.html#gui-applications">GUI applications</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#visual-studio-code-in-combination-with-the-remote-ssh-extension-does-not-work-any-more-on-certain-hpc-clusters">Visual Studio Code (in combination with the Remote-SSH extension) does not work any more on certain HPC clusters</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_software.html#why-do-certain-gui-applications-not-work-any-more-on-the-login-nodes-of-hpc-clusters-what-are-the-alternatives">Why do certain GUI applications not work (any more) on the login nodes of HPC clusters? What are the alternatives?</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="faq/hpc_systems.html">HPC Systems and Services</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#raven">Raven</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#what-are-the-recommended-compiler-optimization-flags-for-raven">What are the recommended compiler optimization flags for Raven?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#slurm-batch-system">Slurm batch system</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-do-i-submit-jobs-to-the-slurm-batch-system">How do I submit jobs to the Slurm batch system?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#can-i-submit-jobs-longer-than-24-hours-why-are-job-run-times-limited-to-24-hours">Can I submit jobs longer than 24 hours? Why are job run times limited to 24 hours?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-do-i-launch-an-mpi-code">How do I launch an MPI code?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#what-is-the-correct-order-of-executable-commands-and-sbatch-directives-in-a-slurm-job-script">What is the correct order of executable commands and ‘#SBATCH’ directives in a Slurm job script?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#can-i-work-interactively-for-debugging-and-development-work">Can I work interactively for debugging and development work?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-query-the-estimated-start-time-of-my-job">How can I query the estimated start time of my job?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-get-information-about-my-job-at-runtime">How can I get information about my job at runtime?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-get-information-about-my-job-after-it-has-finished">How can I get information about my job after it has finished?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#what-happens-when-a-running-job-is-hit-by-a-hardware-failure">What happens when a running job is hit by a hardware failure?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-do-i-do-pinning-correctly">How do I do pinning correctly?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#parallel-file-systems-gpfs">Parallel File Systems (GPFS)</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#which-file-systems-are-available-and-how-should-i-use-them">Which file systems are available and how should I use them?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#i-do-not-get-the-io-performance-i-would-expect-am-i-doing-something-wrong">I do not get the IO performance I would expect. Am I doing something wrong?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-grant-other-users-access-to-my-files-how-do-i-use-acls">How can I grant other users access to my files? How do I use ACLs?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-transfer-files-to-and-from-the-hpc-systems">How can I transfer files to and from the HPC systems?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#performance-monitoring">Performance Monitoring</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-find-out-about-the-performance-of-my-runs">How can I find out about the performance of my runs?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-stop-the-background-performance-monitoring">How can I stop the background performance monitoring?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#gpu-computing">GPU Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-launch-the-nvidia-multi-process-service-mps">How can I launch the NVIDIA Multi-Process Service (MPS)?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-profile-my-gpu-code">How can I profile my GPU code?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#are-there-dedicated-gpu-resources-available-for-interactive-gpu-development">Are there dedicated GPU resources available for interactive GPU development?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#containers">Containers</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#which-container-solutions-are-supported-can-i-run-docker-containers">Which container solutions are supported? Can I run Docker containers?</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="faq/hpc_systems.html#remote-visualization">Remote Visualization</a><ul> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-run-visualization-tools-or-any-software-that-uses-opengl-on-mpcdf-systems">How can I run visualization tools or any software that uses OpenGL on MPCDF systems?</a></li> <li class="toctree-l4"><a class="reference internal" href="faq/hpc_systems.html#how-can-i-get-access-to-mpcdf-remote-visualization-services">How can I get access to MPCDF remote visualization services?</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="faq/tricks.html">Hints, Tips, and Tricks</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/tricks.html#how-can-i-change-my-default-shell">How can I change my default shell?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/tricks.html#how-can-i-launch-ssh-agent-in-a-terminal-session">How can I launch <code class="docutils literal notranslate"><span class="pre">ssh-agent</span></code> in a terminal session?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/tricks.html#how-can-i-avoid-having-to-type-my-password-repeatedly-how-can-i-tunnel-through-the-gateway-machines">How can I avoid having to type my password repeatedly? How can I tunnel through the gateway machines?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/tricks.html#how-can-i-access-the-clusters-using-a-windows-machine">How can I access the clusters using a Windows machine?</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="faq/help.html">Help, Support, and Training</a><ul> <li class="toctree-l3"><a class="reference internal" href="faq/help.html#how-can-i-get-help-and-support">How can I get Help and Support?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/help.html#are-you-offering-trainings-on-how-to-use-mpcdf-resources">Are you offering trainings on how to use MPCDF resources?</a></li> <li class="toctree-l3"><a class="reference internal" href="faq/help.html#how-to-acknowledge-mpcdf">How to acknowledge MPCDF?</a></li> </ul> </li> </ul> </li> </ul> <ul> <li class="toctree-l1"><a class="reference internal" href="doc/index.html">Documentation</a><ul> <li class="toctree-l2"><a class="reference internal" href="doc/computing/index.html">Computing</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/computing/overview.html">Introduction</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/overview.html#overview">Overview</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/overview.html#compute-facilities">Compute Facilities</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/application-support.html">Application Support for HPC, AI and HPDA</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/gateways.html">Gateway machines</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/gateways.html#login">Login</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/gateways.html#gssapi-based-logins-to-mpcdf-hosts">GSSAPI-based logins to MPCDF hosts</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/gateways.html#tunneled-access-to-mpcdf-services">Tunneled access to MPCDF services</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/viper-user-guide.html">Viper User Guide</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#system-overview">System overview</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#access">Access</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#hardware-configuration">Hardware configuration</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#file-systems">File systems</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#software">Software</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#slurm-batch-system">Slurm batch system</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#slurm-example-batch-scripts">Slurm example batch scripts</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/viper-user-guide.html#migration-guide-for-users-coming-from-intel-based-hpc-systems">Migration guide for users coming from Intel-based HPC systems</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/raven-user-guide.html">Raven User Guide</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#system-overview">System Overview</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#access">Access</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#hardware-configuration">Hardware configuration</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#file-systems">File systems</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#software">Software</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#slurm-batch-system">Slurm batch system</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/raven-user-guide.html#slurm-example-batch-scripts">Slurm example batch scripts</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/clusters/index.html">Dedicated clusters</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Astronomy.html">Astronomy</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Astrophysics.html">Astrophysics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Biochemistry.html">Biochemistry</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Biological_Cybernetics.html">Biological Cybernetics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Biological_Intelligence.html">Biological Intelligence</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Biophysics.html">Biophysics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Brain_Research.html">Brain Research</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Chemical_Physics_Solids.html">Chemical Physics of Solids</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Extraterrestrial_Physics.html">Extraterrestrial Physics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/FHI_MPIE_MPIP_TALOS.html">FHI / MPIE / MPIP</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Gravitational_Physics.html">Gravitational Physics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Gravitational_Physics_ACR.html">Gravitational Physics - ACR</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Gravitational_Physics_CRA.html">Gravitational Physics - CRA</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Iron_Research.html">Iron Research</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/MPSD_PKS_ADA.html">MPSD / PKS</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Neurobiology_of_Behavior.html">Neurobiology of Behavior – caesar</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Physics.html">Physics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Plasma_Physics.html">Plasma Physics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Psychiatry.html">Psychiatry</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Quantum_Optics.html">Quantum Optics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Radioastronomy.html">Radioastronomy</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/clusters/systems/Science_of_Light.html">Science of Light</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/software/index.html">Software</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/environment-modules.html">Environment Modules</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/hpc-application-packages.html">HPC Application Packages</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/compilers_languages.html">Compilers and languages</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/libraries.html">Libraries</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/debugging-tools.html">Debugging tools</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/performance-tools.html">Performance tools</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/mathematical-tools.html">Mathematical tools</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/bioinformatics.html">Bioinformatics</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/containers.html">Containers</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/data_analytics-machine_learning.html">Data Analytics / Machine Learning</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/software/vnc.html">VNC</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/hpc-get-started.html">Quickstart guide to HPC</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/hpc-get-started.html#software-environment-modules">Software environment (modules)</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/hpc-get-started.html#mpi-parallel-hpc-applications">MPI parallel HPC applications</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/hpc-get-started.html#multithreaded-openmp-or-hybrid-mpi-openmp-hpc-applications">Multithreaded (OpenMP) or hybrid (MPI/OpenMP) HPC applications</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/hpc-get-started.html#execution-of-parallel-programs-via-slurm">Execution of (parallel) programs via Slurm</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/performance-monitoring.html">Performance Monitoring</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#introduction">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#pdf-performance-reports-for-users">PDF Performance Reports for Users</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#suspending-the-performance-monitoring-system-for-specific-jobs">Suspending the Performance Monitoring System for Specific Jobs</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#technical-background">Technical Background</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#overhead">Overhead</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/performance-monitoring.html#further-information">Further information</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/training.html">Training</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/computing/training.html#courses-and-workshops-arranged-by-or-in-collaboration-with-the-mpcdf">Courses and workshops arranged by or in collaboration with the MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/computing/training.html#training-programmes-of-other-institutions">Training programmes of other institutions</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/data/index.html">Data</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/data/share/index.html">DataShare: Sync and Share Service</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/share/datashare.html">DataShare: An Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/share/domainchange.html">Update the domain of the client</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/share/faq.html">FAQ</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/share/sync-share-clients.html">Desktop and Mobile clients</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/globusonline/index.html">Globus Online: Large-Scale data Transfer and Sharing</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/globusonline/mpcdf-datahub-and-globus-online.html">MPCDF DataHub and Globus Online</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/globusonline/datahub-file-staging.html">Staging Files to HPC systems via Globus Online</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/globusonline/datahub-staging-flow.html">Staging data via Flows</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/globusonline/go-nexus.html">GO-Nexus</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/globusonline/globus-demo-videos.html">Globus Demo Videos - Demonstrating Globus Functionality for end users</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/object-storage/index.html">Nexus-S3: Object Storage for data Transfer and Sharing</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/object-storage/nexus-s3.html">Nexus-S3</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/object-storage/publishing-data-via-s3.html">Publishing Data for public access via S3</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/data-transfer/index.html">Small to Medium Scale Data Transfers</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/data-transfer/data-transfer.html">Data Transfer: Tools & Tips</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/data-transfer/mpcdf-datahub-and-globus-online.html">MPCDF DataHub and Globus Online</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/data-transfer/sharing-large-files-with-datashare.html">Sharing Large Files with DataShare</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/gitlab/index.html">GitLab: Software Development</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/gitlab/gitlab.html">The MPCDF GitLab Instance: an introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/gitlab/devop-tutorial.html">Poetry and GitLab: Devops for Python developers</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/gitlab/gitlabrunners.html">GitLab Runners for CI/CD</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/publication/index.html">Data Publication and Metadata Management</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/publication/datapublishing.html">Service: Data Repositories</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/publication/mmd.html">The MPCDF Metadata Tools: User Documentation</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/publication/mmd-dev.html">The MPCDF Metadata Tools: Developer Documentation</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/publication/metastore-documentation.html">MetaStore User Documentation</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/backup-archive/index.html">Backup and Archive</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/backup-archive-system.html">Backup & Archive Systems</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/archives.html">How to archive data</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/BA_HPC/index.html">Backup HPC</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/BA_Linux_clusters/index.html">Backup Linux Clusters</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/BA_AFS/index.html">Backup AFS</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/backup-archive/BA_desktops/index.html">Backup Desktops</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/data/store/index.html">Deprecated: The Andrew File System (AFS)</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/data/store/introduction-to-afs.html">Store (AFS)</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/store/introduction/index.html">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/store/specific-technical/index.html">Specific-Technical</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/store/glossary/index.html">Glossary</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/data/store/troubleshooting/index.html">Troubleshooting</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/cloud/index.html">HPC-Cloud</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/technical/index.html">Technical and User Documentation</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/quickstart.html">Quick Start</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/compute.html">Compute</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/storage.html">Storage</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/network.html">Network</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/clients.html">Command Line Interface and Scripting</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/technical/recipes.html">Recipes</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/renting/index.html">Rental Model</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#introduction">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#cost-components">Cost components</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#setup-procedure-and-billing-procedure">Setup procedure and billing procedure</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#available-resources">Available Resources</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#compute-resources">Compute resources</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/renting/index.html#storage-resources">Storage resources</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/terms_of_use/index.html">Terms of Use</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#general">General</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#backup-and-recovery">Backup and Recovery</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#data-privacy-and-sensitive-data">Data Privacy and Sensitive Data</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#proprietary-software">Proprietary Software</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#service-interventions-and-scheduled-down-times">Service Interventions and Scheduled Down times</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#performance">Performance</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#support">Support</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/cloud/terms_of_use/index.html#potential-sanctions">Potential Sanctions</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/visualization/index.html">Visualization</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#support-for-the-visualization-of-scientific-data">Support for the Visualization of Scientific Data</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#remote-visualization-and-jupyter-notebook-services">Remote Visualization and Jupyter Notebook Services</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/visualization/index.html#web-interface">Web Interface</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/visualization/index.html#command-line-interface">Command line interface</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/visualization/index.html#technical-details">Technical details</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/visualization/index.html#troubleshooting">Troubleshooting</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#robin">Robin</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/campus/index.html">Campus</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/campus/software/index.html">Software</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/vpn/index.html">VPN</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/campus/vpn/index.html#vpn-server-gateway">VPN Server (Gateway)</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/vpn/index.html#connection-profile-group">Connection Profile (Group)</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/vpn/index.html#desktop-and-notebook-windows-mac-os-x-linux">Desktop and Notebook (Windows, Mac OS X, Linux)</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/vpn/index.html#linux-clients">Linux Clients</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/vpn/index.html#mobile-devices-android-and-ios">Mobile Devices (Android and iOS)</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/wifi/index.html">Wi-Fi</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/campus/wifi/index.html#guest-networks">Guest networks</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/wifi/index.html#eduroam">Eduroam</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/wifi/index.html#installation-mpcdf-mpq-staff-only">Installation (<em>MPCDF/MPQ staff only</em>)</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/email/index.html">Email Configuration</a><ul> <li class="toctree-l4"><a class="reference internal" href="doc/campus/email/electronic-mail-at-mpcdf.html">Email Service</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/email/email_client_config/config.html">Email Client configuration</a></li> <li class="toctree-l4"><a class="reference internal" href="doc/campus/email/mailing-lists.html">Mailing Lists</a></li> </ul> </li> </ul> </li> </ul> </li> </ul> <ul> <li class="toctree-l1"><a class="reference internal" href="bnb/index.html">Bits and Bytes</a><ul> <li class="toctree-l2"><a class="reference internal" href="bnb/216.html">No.216, August 2024</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#new-hpc-system-viper-phase-1-cpu">New HPC system <em>Viper</em> (Phase-1: CPU)</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#hpc-software-news">HPC Software News</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#mpcdf-gitlab-module-image-to-be-discontinued-on-october-31">MPCDF GitLab <code class="docutils literal notranslate"><span class="pre">module-image</span></code> to be discontinued on October 31</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#new-module-images-available-in-mpcdf-gitlab">New module images available in MPCDF GitLab</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#nvidia-hpc-sdk-version-24-3-available-on-raven">Nvidia HPC SDK version 24.3 available on <em>Raven</em></a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#major-change-in-the-python-infrastructure-on-the-hpc-clusters">Major Change in the Python Infrastructure on the HPC Clusters</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#introducing-containerized-applications-as-part-of-the-mpcdf-software-stack">Introducing containerized Applications as Part of the MPCDF Software Stack</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#nexus-s3-object-storage-in-the-hpc-cloud-and-beyond">Nexus-S3: Object Storage in the HPC-Cloud and beyond</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#example-use-case">Example use case</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#opt-in-via-selfservice">Opt-in via SelfService</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#object-storage-for-larger-projects">Object storage for larger projects</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#the-metastore-research-data-publication-platform">The MetaStore Research Data Publication Platform</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#managing-data-sets-and-resources-in-metastore">Managing data sets and resources in MetaStore</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#who-can-use-it">Who can use it</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#news">News</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#password-policy">Password policy</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#fa-for-datashare-and-gitlab">2FA for DataShare and GitLab</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/216.html#events">Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#amd-gpu-workshop-hackathon-november-5-7">AMD GPU workshop & hackathon (November 5-7)</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#introduction-to-mpcdf-services-october-24">Introduction to MPCDF services (October 24)</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#mpcdf-at-garching-campus-open-doors-october-3">MPCDF at Garching Campus Open Doors (October 3)</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#hpc-cloud-workshop-september-10-12">HPC-Cloud workshop (September 10-12)</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/216.html#course-on-python-for-hpc-november-26-28">Course on “Python for HPC” (November 26-28)</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/215.html">No.215, April 2024</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#high-performance-computing">High-performance computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#licensed-software-in-slurm-comsol">Licensed software in Slurm (Comsol)</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#hpc-software-news">HPC Software News</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#improved-workflow-for-multimer-predictions-with-alphafold2-on-raven">Improved workflow for multimer predictions with AlphaFold2 on <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#new-version-of-intel-oneapi-with-deprecation-of-ifort-compiler">New version of Intel oneAPI with deprecation of ifort compiler</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#cuda-modules-on-raven">CUDA modules on <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#new-amd-gpu-elpa-release">New AMD-GPU ELPA release</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#kubernetes-in-the-hpc-cloud">Kubernetes in the HPC-Cloud</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#usage">Usage</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#function">Function</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#existing-applications">Existing applications</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#gitlab-graphs-diagrams">GitLab: Graphs & Diagrams</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#alternatives">Alternatives</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#llms-meet-mpcdf">LLMs meet MPCDF</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/215.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#introduction-to-mpcdf-services">Introduction to MPCDF services</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/215.html#meet-mpcdf">Meet MPCDF</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/214.html">No.214, December 2023</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/214.html#hpc-software-news">HPC Software News</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#cuda-aware-openmpi-on-raven">CUDA-aware OpenMPI on <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#gpu-accelerated-vasp">GPU-accelerated VASP</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#intel-oneapi-transition-from-ifort-to-ifx">Intel oneAPI: transition from ifort to ifx</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/214.html#module-software-stacks-for-continuous-integration-pipelines-on-mpcdf-gitlab-shared-cloud-runners">Module Software Stacks for Continuous Integration Pipelines on MPCDF GitLab Shared Cloud Runners</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#introducing-a-novel-module-enabled-docker-image-infrastructure">Introducing a novel module-enabled Docker image infrastructure</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#announcing-legacy-status-and-later-discontinuation-of-the-module-image">Announcing legacy status and later discontinuation of the <code class="docutils literal notranslate"><span class="pre">module-image</span></code></a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/214.html#compressed-portable-conda-environments-for-hpc-systems">Compressed Portable Conda Environments for HPC Systems</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#introduction-and-motivation">Introduction and Motivation</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#move-conda-environments-into-compressed-image-files">Move Conda environments into compressed image files</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#basic-usage-examples">Basic usage examples</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#limitations">Limitations</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#availability">Availability</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/214.html#new-features-in-the-hpc-cloud">New Features in the HPC-Cloud</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#expanded-menu-of-flavors-and-images">Expanded menu of flavors and images</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#ssd-based-block-volumes">SSD-based block volumes</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#automated-domain-name-service">Automated domain name service</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#shared-filesystem-service">Shared filesystem service</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#the-robin-cluster">The Robin cluster</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/214.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#amd-gpu-development-workshop">AMD-GPU development workshop</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/214.html#rda-deutschland-tagung-2024">RDA Deutschland Tagung 2024</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/213.html">No.213, August 2023</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#new-gpu-development-partition-on-raven">New GPU development partition on <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#memory-profiling-with-heaptrack">Memory profiling with heaptrack</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#new-compilers-and-libraries-intel-oneapi-2023-1">New compilers and libraries: Intel oneAPI 2023.1</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#using-linters-to-improve-and-maintain-code-quality">Using linters to improve and maintain code quality</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#hpc-cloud-object-storage">HPC-Cloud Object Storage</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#jade-automated-slurm-deployments-in-the-hpc-cloud">JADE - Automated Slurm deployments in the HPC-Cloud</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#gitlab-tips-tricks">GitLab: Tips & Tricks</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#online-editing-of-source-code-revisited">Online editing of source code revisited</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#custom-badges">Custom badges</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#security-warning">Security warning</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#new-ibm-tape-library-and-tape-drives-installed-at-mpcdf">New IBM tape library and tape drives installed at MPCDF</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/213.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#open-positions-at-mpcdf">Open positions at MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/213.html#amd-gpu-development-workshop">AMD-GPU development workshop</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/212.html">No.212, April 2023</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/212.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#new-supercomputer-of-the-mpg-cobra-successor">New Supercomputer of the MPG - <em>Cobra</em> successor</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#documentation-of-hpc-hardware-characteristics">Documentation of HPC hardware characteristics</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#cmake-recipes-repository">CMake Recipes Repository</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/212.html#mpcdf-hpc-cloud">MPCDF HPC Cloud</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#introduction">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#hardware-resources">Hardware Resources</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#project-support">Project Support</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#summary">Summary</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/212.html#news">News</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#mpcdf-selfservice">MPCDF SelfService</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#pushing-fusion-plasma-simulations-towards-exascale">Pushing Fusion-Plasma Simulations Towards Exascale</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#base4nfdi-creating-nfdi-wide-basic-services-in-a-world-of-specific-domains">Base4NFDI: Creating NFDI-wide basic services in a world of specific domains</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/212.html#events">Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#introduction-to-mpcdf-services">Introduction to MPCDF services</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#ai-training-course">AI Training Course</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#course-on-python-for-hpc">Course on “Python for HPC”</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/212.html#rda-deutschland-conference">RDA-Deutschland Conference</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/211.html">No.211, December 2022</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/211.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#anaconda-python-modules">Anaconda Python modules</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#hints-for-architecture-specific-and-optimized-cuda-compilation">Hints for architecture-specific and optimized CUDA compilation</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#new-intel-c-c-compilers-and-associated-mpcdf-software-stack">New Intel C/C++ compilers and associated MPCDF software stack</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#turbomole-license-for-mpg-renewed">Turbomole license for MPG renewed</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#apptainer-on-hpc-clusters-the-linux-foundation-successor-to-singularity">Apptainer on HPC clusters, the Linux Foundation successor to Singularity</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/211.html#gitlab-tips-tricks-use-of-docker-images-in-gitlab-ci">GitLab Tips & Tricks: Use of Docker Images in GitLab CI</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/211.html#go-nexus">GO-Nexus</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/211.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#discontinuation-of-general-vpn">Discontinuation of General VPN</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#python-for-hpc">Python for HPC</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/211.html#advanced-hpc-workshop">Advanced HPC Workshop</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/210.html">No.210, August 2022</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/210.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#cobra-successor-procurement">Cobra successor procurement</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#co-sub-2-sub-footprint-of-mpcdf">CO<sub>2</sub> footprint of MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#software-news">Software news</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/210.html#gitlab-ci-distributed-cache">GitLab CI Distributed Cache</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#introduction">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#adding-a-cache-to-your-ci-configuration">Adding a cache to your CI configuration</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#ci-of-software-that-depends-on-third-party-packages">CI of software that depends on third-party packages</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#ci-of-a-complex-hpc-code-that-requires-cpu-and-partly-gpu-resources">CI of a complex HPC code that requires CPU and partly GPU resources</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#concluding-remarks">Concluding remarks</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/210.html#globus-flows">Globus Flows</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#id1">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#flows-in-detail">Flows in detail</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#example">Example</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#summary">Summary</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/210.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#introduction-to-mpcdf-services">Introduction to MPCDF services</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#meet-mpcdf">Meet MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#advanced-hpc-workshop">Advanced HPC workshop</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/210.html#python-for-hpc">Python for HPC</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/209.html">No.209, April 2022</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#alphafold2-on-the-hpc-system-raven">AlphaFold2 on the HPC system <em>Raven</em></a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#gitlab-ci">GitLab CI</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#gitlab-shared-runners-on-gpus">GitLab shared runners on GPUs</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#continuous-integration-testing-for-hpc-codes-on-mpcdf-gitlab">Continuous integration testing for HPC codes on MPCDF GitLab</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#globus-online">Globus Online</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#datahub-access-via-the-globus-online-portal">DataHub access via the Globus Online Portal</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#enhanced-functionality">Enhanced functionality</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#more-information">More information</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#new-selfservice-features-and-improvements">New SelfService Features and Improvements</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#redesign-of-the-login-process">Redesign of the login process</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#viewing-accounting-data">Viewing accounting data</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#additional-improvements">Additional improvements</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#access-to-afs-restricted-for-local-access-only">Access to AFS restricted for local Access only</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/209.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#ai-bootcamp">AI bootcamp</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#international-hpc-summer-school-2022">International HPC Summer School 2022</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#workshop-introduction-to-mpcdf-services-online">Workshop “Introduction to MPCDF services (online)”</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#meet-mpcdf-new-online-forum-and-lectures-for-mpcdf-users">“Meet MPCDF”: New online forum and lectures for MPCDF users</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/209.html#rda-deutschland-tagung-2022">RDA-Deutschland-Tagung 2022</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/208.html">No.208, December 2021</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#termination-of-general-user-operation-for-draco-login-nodes">Termination of general user operation for <em>Draco</em> login nodes</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#announcement-of-cuda-no-defaults-on-cobra-and-raven">Announcement of CUDA no-defaults on <em>Cobra</em> and <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#usage-of-tmp-and-dev-shm-on-cobra-and-raven">Usage of /tmp and /dev/shm on <em>Cobra</em> and <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#eigensolver-library-elpa">Eigensolver library ELPA</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#using-python-based-hybrid-parallel-codes-on-hpc-systems">Using Python-based hybrid-parallel codes on HPC systems</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#python-bindings-for-c-using-pybind11-and-scikit-build">Python bindings for C++ using pybind11 and scikit-build</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#interfacing-python-numpy-with-c-using-pybind11">Interfacing Python/NumPy with C++ using pybind11</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#build-with-scikit-build">Build with scikit-build</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#the-gitlab-package-registry">The Gitlab Package Registry</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#example-publishing-python-packages">Example: Publishing Python packages</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#using-application-tokens-instead-of-passwords">Using Application Tokens instead of Passwords</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#datashare">DataShare</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#gitlab">GitLab</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#software-publishing">Software Publishing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#do-it-yourself">Do it yourself</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#publish-via-a-data-archiving-site">Publish via a data archiving site</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#software-heritage">Software Heritage</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#final-remarks">Final remarks</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/208.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#international-hpc-summer-school-2022">International HPC Summer School 2022</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#advanced-hpc-workshop-2021">Advanced HPC workshop 2021</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/208.html#years-max-planck-computing-centre-in-garching">60 Years Max Planck Computing Centre in Garching</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/207.html">No.207, August 2021</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/207.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#hpc-system-raven-fully-operational">HPC system <em>Raven</em> fully operational</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#gpu-computing-on-raven">GPU Computing on <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#hpc-system-cobra-module-system-to-be-aligned-with-raven">HPC system <em>Cobra</em> - Module system to be aligned with <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#decommissioning-of-draco">Decommissioning of <em>Draco</em></a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/207.html#hpc-cloud">HPC Cloud</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/207.html#poetry-packaging-and-dependency-management-for-python">Poetry: Packaging and Dependency Management for Python</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#introduction">Introduction</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#a-poetry-project-and-initial-configuration">A Poetry project and initial configuration</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#dependency-management">Dependency Management</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#running-your-code">Running your code</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#package-creation-and-publishing">Package creation and publishing</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#conclusion">Conclusion</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/207.html#more-functionality-for-the-selfservice-call-to-action-for-2fa-users">More functionality for the SelfService - Call to action for 2FA users</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#migration-of-mympcdf-functionality">Migration of MyMPCDF functionality</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#updated-password-policy">Updated password policy</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#two-factor-authentication-2fa-call-to-action">Two-Factor Authentication (2FA) - Call to action</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/207.html#news-events">News & Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#brochure-high-performance-computing-and-data-science-in-the-mpg">Brochure “High-Performance Computing and Data Science in the MPG”</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#gpu-bootcamp">GPU bootcamp</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#introductory-course-for-new-users-of-mpcdf">Introductory course for new users of MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#advanced-hpc-workshop">Advanced HPC workshop</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/207.html#python-for-hpc">Python for HPC</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/206.html">No.206, April 2021</a><ul> <li class="toctree-l3"><a class="reference internal" href="bnb/206.html#high-performance-computing">High-performance Computing</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/206.html#hpc-system-raven-deployment-of-the-final-system">HPC System <em>Raven</em>: deployment of the final system</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/206.html#charliecloud-and-singularity-containers-supported-on-cobra-and-raven">Charliecloud and Singularity containers supported on <em>Cobra</em> and <em>Raven</em></a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/206.html#control-and-verification-of-the-cpu-affinity-of-processes-and-threads">Control and verification of the CPU affinity of processes and threads</a></li> </ul> </li> <li class="toctree-l3"><a class="reference internal" href="bnb/206.html#high-performance-data-analytics-and-ai-software-stack-at-mpcdf">High-performance data analytics and AI software stack at MPCDF</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/206.html#decommissioning-of-afs">Decommissioning of AFS</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/206.html#relaunch-of-mpcdf-website-and-new-technical-documentation-platform">Relaunch of MPCDF website and new technical documentation platform</a></li> <li class="toctree-l3"><a class="reference internal" href="bnb/206.html#events">Events</a><ul> <li class="toctree-l4"><a class="reference internal" href="bnb/206.html#new-online-introductory-course-for-new-users-of-mpcdf">New online introductory course for new users of MPCDF</a></li> <li class="toctree-l4"><a class="reference internal" href="bnb/206.html#advanced-hpc-workshop-save-the-date">Advanced HPC workshop: save the date</a></li> </ul> </li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="bnb/previous.html">Previous Editions</a></li> </ul> </li> </ul> </div> </div> </nav> <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" style="background: #EEEEEE" > <i data-toggle="wy-nav-top" class="fa fa-bars"></i> <a href="#">Technical Documentation</a> </nav> <div class="wy-nav-content"> <div class="rst-content style-external-links"> <div role="navigation" aria-label="Page navigation"> <ul class="wy-breadcrumbs"> <li><a href="#" class="icon icon-home" aria-label="Home"></a></li> <li class="breadcrumb-item active">MPCDF Technical Documentation</li> <li class="wy-breadcrumbs-aside"> </li> </ul> <hr/> </div> <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article"> <div itemprop="articleBody"> <div class="section" id="mpcdf-technical-documentation"> <h1>MPCDF Technical Documentation<a class="headerlink" href="#mpcdf-technical-documentation" title="Permalink to this heading"></a></h1> <p>This technical documentation is a reference for the users of the MPCDF services.</p> <p>In case of questions that go beyond the scope of the documentation please contact <a class="reference external" href="/faq/help">MPCDF support</a>.</p> <p>Introductory online tutorials on how to use the MPCDF services are <a class="reference external" href="https://www.mpcdf.mpg.de/services/training">given regularly</a>.</p> <div class="section" id="frequently-asked-questions"> <h2>Frequently Asked Questions<a class="headerlink" href="#frequently-asked-questions" title="Permalink to this heading"></a></h2> <div class="toctree-wrapper compound"> <ul> <li class="toctree-l1"><a class="reference internal" href="faq/index.html">Frequently Asked Questions</a><ul> <li class="toctree-l2"><a class="reference internal" href="faq/account.html">Account registration</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/connecting.html">Connecting</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/2fa.html">Two-factor authentication (2FA)</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/hpc_software.html">HPC Software and Applications</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/hpc_systems.html">HPC Systems and Services</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/tricks.html">Hints, Tips, and Tricks</a></li> <li class="toctree-l2"><a class="reference internal" href="faq/help.html">Help, Support, and Training</a></li> </ul> </li> </ul> </div> </div> <div class="section" id="documentation"> <h2>Documentation<a class="headerlink" href="#documentation" title="Permalink to this heading"></a></h2> <div class="toctree-wrapper compound"> <ul> <li class="toctree-l1"><a class="reference internal" href="doc/index.html">Documentation</a><ul> <li class="toctree-l2"><a class="reference internal" href="doc/computing/index.html">Computing</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/computing/overview.html">Introduction</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/application-support.html">Application Support for HPC, AI and HPDA</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/gateways.html">Gateway machines</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/viper-user-guide.html">Viper User Guide</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/raven-user-guide.html">Raven User Guide</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/clusters/index.html">Dedicated clusters</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/software/index.html">Software</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/hpc-get-started.html">Quickstart guide to HPC</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/performance-monitoring.html">Performance Monitoring</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/computing/training.html">Training</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/data/index.html">Data</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/data/share/index.html">DataShare: Sync and Share Service</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/globusonline/index.html">Globus Online: Large-Scale data Transfer and Sharing</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/object-storage/index.html">Nexus-S3: Object Storage for data Transfer and Sharing</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/data-transfer/index.html">Small to Medium Scale Data Transfers</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/gitlab/index.html">GitLab: Software Development</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/publication/index.html">Data Publication and Metadata Management</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/backup-archive/index.html">Backup and Archive</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/data/store/index.html">Deprecated: The Andrew File System (AFS)</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/cloud/index.html">HPC-Cloud</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/technical/index.html">Technical and User Documentation</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/renting/index.html">Rental Model</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/cloud/terms_of_use/index.html">Terms of Use</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/visualization/index.html">Visualization</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#support-for-the-visualization-of-scientific-data">Support for the Visualization of Scientific Data</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#remote-visualization-and-jupyter-notebook-services">Remote Visualization and Jupyter Notebook Services</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/visualization/index.html#robin">Robin</a></li> </ul> </li> <li class="toctree-l2"><a class="reference internal" href="doc/campus/index.html">Campus</a><ul> <li class="toctree-l3"><a class="reference internal" href="doc/campus/software/index.html">Software</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/vpn/index.html">VPN</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/wifi/index.html">Wi-Fi</a></li> <li class="toctree-l3"><a class="reference internal" href="doc/campus/email/index.html">Email Configuration</a></li> </ul> </li> </ul> </li> </ul> </div> </div> <div class="section" id="bits-and-bytes"> <h2>Bits and Bytes<a class="headerlink" href="#bits-and-bytes" title="Permalink to this heading"></a></h2> <div class="toctree-wrapper compound"> <ul> <li class="toctree-l1"><a class="reference internal" href="bnb/index.html">Bits and Bytes</a><ul> <li class="toctree-l2"><a class="reference internal" href="bnb/216.html">No.216, August 2024</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/215.html">No.215, April 2024</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/214.html">No.214, December 2023</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/213.html">No.213, August 2023</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/212.html">No.212, April 2023</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/211.html">No.211, December 2022</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/210.html">No.210, August 2022</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/209.html">No.209, April 2022</a></li> <li class="toctree-l2"><a class="reference internal" href="bnb/208.html">No.208, December 2021</a></li> <li class="toctree-l2"><a class="reference internal" 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