SDMS Integrations | LabKey Server SDMS

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href="https://www.labkey.com/products-services/electronic-lab-notebook/" target="_self" ><span>Electronic Lab Notebook</span></a></li> </ul> </li> <li data-target="2-main" class="has-submenu open_hover"><a class="dropdown-item" href="/products-services/biologics-lims/" target="_self" >Biologics LIMS</a> <ul class="d-md-none"> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/" target="_self" ><span>Biologics LIMS Overview </span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/sample-plate-management/" target="_self" ><span>Sample & Plate Management</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/antibody-screening-characterization/" target="_self" ><span>Screening & Characterization</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/bioregistry/" target="_self" ><span>Bioregistry</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" ><span>Electronic Lab Notebook</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/#editions" target="_self" ><span>Biologics LIMS Pricing</span></a></li> </ul> </li> <li data-target="3-main" class="has-submenu open_hover"><a class="dropdown-item" href="/products-services/labkey-server/" target="_self" >Scientific Data Management System</a> <ul class="d-md-none"> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/" target="_self" ><span>SDMS Overview</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/sdms-integrations/" target="_self" ><span>Data & System Integrations</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/data-visualization-reporting/" target="_self" ><span>Visualization & Reports</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/security-compliance/" target="_self" ><span>Security & Compliance</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/developer-tools/" target="_self" ><span>Developer Tools</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/#editions" target="_self" ><span>SDMS Pricing</span></a></li> </ul> </li> <li data-target="4-main" class="has-submenu open_hover"><a class="dropdown-item" href="/products-services/cdms-software/" target="_self" >Clinical Data Management System</a> <ul class="d-md-none"> <li class="has-submenu"><a class="dropdown-item" href="/products-services/cdms-software/" target="_self" ><span>CDMS Overview </span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/sdms-integrations/#integrations" target="_self" ><span>System & Data Integrations</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/data-visualization-reporting/" target="_self" ><span>Analysis & Reporting</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/security-compliance/" target="_self" ><span>Security & Compliance</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> </ul> </li> <li data-target="5-main" class="has-submenu open_hover"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" >Electronic Lab Notebook</a> <ul class="d-md-none"> <li class="has-submenu"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" ><span>ELN Overview </span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/labkey-server/" target="_self" ><span>SDMS</span></a></li> <li class="has-submenu"><a class="dropdown-item" href="/products-services/biologics-lims/" target="_self" ><span>Antibody Discovery</span></a></li> </ul> </li> <li data-target="6-main" class="has-submenu open_hover"><a class="dropdown-item" href="/products-services/mass-spectrometry-software/" target="_self" >Panorama - Skyline Mass Spec </a> <ul class="d-md-none"> <li class="has-submenu"><a class="dropdown-item" href="/products-services/mass-spectrometry-software/" target="_self" ><span>Panorama Overview</span></a></li> </ul> </li> </ul> </li> <li class="has-submenu d-none d-lg-block column_wrapper"> <span class="column_title text-left">Features</span> <ul> <li class="hide_hover 0-main active"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Manager Overview</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/sample-tracking/" target="_self" ><span>Sample Tracking</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/freezer-management/" target="_self" ><span>Freezer Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/data-integration/" target="_self" ><span>Assay Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/lab-workflow/" target="_self" ><span>Workflow Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" ><span>Electronic Lab Notebook</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/#editions" target="_self" ><span>Sample Manager Pricing</span></a></li> </ul></li><li class="hide_hover 1-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/lims-software/" target="_self" ><span>LabKey LIMS Overview</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="https://www.labkey.com/products-services/lims-software/lims-inventory-management/" target="_self" ><span>Inventory Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="https://www.labkey.com/products-services/lims-software/lab-automation/" target="_self" ><span>Lab Automation</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="https://www.labkey.com/products-services/lims-software/lims-data-management/" target="_self" ><span>Data Management & Reporting</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="https://www.labkey.com/products-services/electronic-lab-notebook/" target="_self" ><span>Electronic Lab Notebook</span></a></li> </ul></li><li class="hide_hover 2-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/" target="_self" ><span>Biologics LIMS Overview </span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/sample-plate-management/" target="_self" ><span>Sample & Plate Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/antibody-screening-characterization/" target="_self" ><span>Screening & Characterization</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/bioregistry/" target="_self" ><span>Bioregistry</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" ><span>Electronic Lab Notebook</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/#editions" target="_self" ><span>Biologics LIMS Pricing</span></a></li> </ul></li><li class="hide_hover 3-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/" target="_self" ><span>SDMS Overview</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/sdms-integrations/" target="_self" ><span>Data & System Integrations</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/data-visualization-reporting/" target="_self" ><span>Visualization & Reports</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/security-compliance/" target="_self" ><span>Security & Compliance</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/developer-tools/" target="_self" ><span>Developer Tools</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/#editions" target="_self" ><span>SDMS Pricing</span></a></li> </ul></li><li class="hide_hover 4-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/cdms-software/" target="_self" ><span>CDMS Overview </span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/sdms-integrations/#integrations" target="_self" ><span>System & Data Integrations</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/data-visualization-reporting/" target="_self" ><span>Analysis & Reporting</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/security-compliance/" target="_self" ><span>Security & Compliance</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> </ul></li><li class="hide_hover 5-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/electronic-lab-notebook/" target="_self" ><span>ELN Overview </span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/sample-management-software/" target="_self" ><span>Sample Management</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/labkey-server/" target="_self" ><span>SDMS</span></a></li> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/biologics-lims/" target="_self" ><span>Antibody Discovery</span></a></li> </ul></li><li class="hide_hover 6-main"><ul> <li class="has-submenu sub_menu_link_product"><a class="dropdown-item" href="/products-services/mass-spectrometry-software/" target="_self" ><span>Panorama Overview</span></a></li> </ul></li> </ul> </li> <li class="column_wrapper"> <span class="column_title text-left">Take a Tour</span> <div class="ctas_wrapper"> <div class="cta_single"> <div class="icon_area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/samplesArtboard-1.png" alt="" class="img-fluid"> </div> <div class="cta_text_area"> <span class="title_cta">Sample Manager Tour</span> <span class="subtitle_cta">Manage and track the full lifecycle of your lab samples.</span> </div> <a class="strecth-link" href="https://hs.labkey.com/sample-manager-tour" target="_self" ><span>Sample Manager Tour</span></a> </div> <div class="cta_single"> <div class="icon_area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/antibodyArtboard-1.png" alt="" class="img-fluid"> </div> <div class="cta_text_area"> <span class="title_cta">Biologics LIMS Tour</span> <span class="subtitle_cta">Boost the efficiency of your antibody discovery workflows.</span> </div> <a class="strecth-link" href="/products-services/biologics-lims/biologics-lims-tour/" target="_self" ><span>Biologics LIMS Tour</span></a> </div> </div> </li> </ul> </li> <li class="nav-item dropdown"> <a class="nav-link has-submenu" href="/solutions/" target="_self" >Solutions</a> <span class="mobile-toggle d-lg-none"></span> <ul class="dropdown-menu "> <li class="has-submenu column_wrapper"> <span class="column_title text-left">Industries</span> <ul> <li class="has-submenu"><a class="dropdown-item" href="/solutions/biotech-pharma/" target="_self" >Biotech/Pharma</a></li> <li class="has-submenu"><a class="dropdown-item" href="/solutions/academic-research-software/" target="_self" >Academic Research</a></li> <li class="has-submenu"><a class="dropdown-item" href="/solutions/government-research/" target="_self" >Government Research</a></li> </ul> </li> <li class="has-submenu column_wrapper"> <span class="column_title text-left">Applications</span> <ul> <li class="has-submenu"><a class="dropdown-item" href="/solutions/biotech-software/" target="_self" >Biotech R&D</a></li> <li class="has-submenu"><a class="dropdown-item" href="/clinical-research-software/" target="_self" >Clinical Trials & Studies</a></li> <li class="has-submenu"><a class="dropdown-item" href="https://www.labkey.com/solutions/biobank-software/" target="_self" >Biobank Software</a></li> <li class="has-submenu"><a class="dropdown-item" href="/solutions/lab-data-management/" target="_self" >Lab Data Management</a></li> <li class="has-submenu"><a class="dropdown-item" href="https://www.labkey.com/solutions/bioinformatics-software/" target="_self" >Bioinformatics Software</a></li> <li class="has-submenu"><a class="dropdown-item" href="/life-science-cloud/" target="_self" >Scientific Cloud</a></li> </ul> </li> <li class="column_wrapper text_go_center"> <span class="column_title col_3_sol">User Presentations</span> <div class="img-area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/Screenshot-2024-05-30-at-12.31.40 PM.png" alt=""> <a class="strecht-link" href="/resources/#user_presentation" target="_self" ><span>Watch User Presentations</span></a> </div> <div class="text-area"> <span class="title">See how LabKey has helped life science organizations succeed.</span> <a class="btn btn-secondary mt-3" href="/resources/#user_presentation" target="_self" ><span>Watch User Presentations</span></a> </div> </li> </ul> </li> <li class="nav-item dropdown"> <a class="nav-link has-submenu" href="/why-choose-labkey/" target="_self" >Working with LabKey</a> <span class="mobile-toggle d-lg-none"></span> <ul class="dropdown-menu "> <li class="has-submenu column_wrapper"> <span class="column_title text-left">Hear from Our Clients</span> <ul> <li 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src="https://www.labkey.com/wp-content/uploads/2024/07/lightbulb-solutionsArtboard-1.png" alt="" class="img-fluid"> </div> <div class="cta_text_area"> <span class="title_cta">Our Solutions</span> <span class="subtitle_cta">Learn about our solutions.</span> </div> <a class="strecth-link" href="/solutions/" target="_self" ><span></span></a> </div> </div> </li> <li class="column_wrapper text_go_center"> <span class="column_title">Why Choose LabKey</span> <div class="img-area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/whylabkeyArtboard-1.png" alt=""> <a class="strecht-link" href="/why-choose-labkey/" target="_self" ><span>Read Why</span></a> </div> <div class="sub_area"> <p>Learn how our experience and expertise helps our clients.</p> </div> <a class="nav-link btn btn-secondary" href="/why-choose-labkey/" target="_self" ><span>Read Why</span></a> </li> </ul> </li> <li class="nav-item dropdown"> <a class="nav-link has-submenu" href="/resources/" target="_self" >Resources</a> <span class="mobile-toggle d-lg-none"></span> <ul class="dropdown-menu "> <li class="has-submenu column_wrapper"> <span class="column_title text-left">Resources</span> <ul> <li class="has-submenu"><a class="dropdown-item" href="/resources/#blog_posts" target="_self" >Blog</a></li> <li class="has-submenu"><a class="dropdown-item" href="/resources/#webinar" target="_self" >Webinars</a></li> <li class="has-submenu"><a class="dropdown-item" href="/resources/#publications" target="_self" >Publications</a></li> </ul> </li> <li class="has-submenu column_wrapper button_on_mobile"> <span class="column_title text-left">Learn From Our Clients</span> <div class="ctas_wrapper"> <div class="cta_single"> <div class="icon_area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/user-presentationsArtboard-1.png" alt="" class="img-fluid"> </div> <div class="cta_text_area"> <span class="title_cta">User Presentations</span> <span class="subtitle_cta">Hear how life science organizations have succeeded with LabKey. </span> </div> <a class="strecth-link" href="/resources/#user_presentation" target="_self" ><span></span></a> </div> <div class="cta_single"> <div class="icon_area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/case-studiesArtboard-1.png" alt="" class="img-fluid"> </div> <div class="cta_text_area"> <span class="title_cta">Case Studies</span> <span class="subtitle_cta">Read about use cases similar to yours.</span> </div> <a class="strecth-link" href="/resources/#case_study" target="_self" ><span></span></a> </div> </div> </li> <li class="column_wrapper text_go_center"> <span class="column_title">Explore Our Solutions</span> <div class="img-area"> <img src="https://www.labkey.com/wp-content/uploads/2024/07/Screenshot-2024-06-03-at-9.17.08 PM.png" alt=""> <a class="strecht-link" href="/solutions/" target="_self" ><span>Explore</span></a> </div> <div class="sub_area"> <p>Software solutions for life science groups of any shape and size. </p> </div> <a class="nav-link btn btn-secondary" href="/solutions/" target="_self" ><span>Explore</span></a> </li> </ul> </li> <li class="nav-item dropdown"> <a class="nav-link has-submenu" href="/about/" target="_self" >Company</a> <span class="mobile-toggle d-lg-none"></span> <ul class="dropdown-menu "> <li class="has-submenu column_wrapper"> <span class="column_title ">About Us</span> <ul> <li class="has-submenu"><a class="dropdown-item" href="/about/history/" target="_self" >Our History</a></li> <li class="has-submenu"><a class="dropdown-item" href="/about/values-and-diversity/" target="_self" >Diversity & Inclusion</a></li> <li class="has-submenu"><a class="dropdown-item" href="/about/careers/" target="_self" >Careers</a></li> </ul> </li> <li class="has-submenu column_wrapper button_on_mobile"> <span class="column_title ">Contact Us</span> <div class="ctas_wrapper"> <div class="cta_single"> <div class="cta_text_area"> <span class="title_cta">Request a Demo</span> </div> <a class="strecth-link" href="/request-demo/" target="_self" ><span></span></a> </div> <div class="cta_single"> <div class="cta_text_area"> <span class="title_cta">General Inquiries</span> </div> <a class="strecth-link" href="/about/contact-us/" target="_self" ><span></span></a> </div> </div> </li> <li class="column_wrapper text_go_center"> <span class="column_title">Why Is LabKey Different?</span> <div class="img-area"> <img src="" alt=""> <a class="strecht-link" href="/why-choose-labkey/" target="_self" ><span>Read More</span></a> </div> <div class="sub_area"> <p>See how our experience, expertise and exceptional client service makes us more than just another software vendor. </p> </div> <a class="nav-link btn btn-secondary" href="/why-choose-labkey/" target="_self" ><span>Read More</span></a> </li> </ul> </li> <li class="nav-item"> <a class="nav-link btn btn-secondary" href="/request-demo/" target="_self" ><span>Get a Demo</span></a> </li> </ul> </div> </nav> </div> </header> <main id="primary" class="site-main"> <style type="text/css"> @media (min-width: 768px) { .page-banner { margin-bottom: -80px; } } </style> <section class="page-banner "> <div class="background-area"> </div> <div class="content-area revert v2"> <div class="left-area"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/AdobeStock_192471411-Converted.png" alt="" class="img-fluid"> </div> <div class="right-area"> <span id="breadcrumbs"><span><span><a href="https://www.labkey.com/">Home</a></span> > <span><a href="https://www.labkey.com/products-services/">Products</a></span> > <span><a href="https://www.labkey.com/products-services/labkey-server/">SDMS Software</a></span> > <span class="breadcrumb_last" aria-current="page">SDMS Integrations</span></span></span> <h1 class="darkblue">Centralize and align all of your R&D data in one secure system.</h1> <p><span style="font-weight: 400;">The LabKey Server <a href="https://www.labkey.com/products-services/labkey-server/">SDMS</a> integrations offer flexible data import designed to capture and harmonize virtually any type of life science research data. Scientific data can be captured and integrated with related demographic, clinical and sample data to form a “single source of truth” for R&D data. Data integrity is maintained via quality control features and automation tools that reduce the need for error-prone manual processes.</span><span style="font-weight: 400;"><br /> </span></p> <p><b>SDMS integrations allow you to:</b></p> <ul class="custom-ul"> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Model and import virtually any type of R&D data, from any source </span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Harmonize lab data with clinical, demographic and sample related data</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Create workflows that shape your data and automate quality control</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Secure your data with permission-based access and comply with HIPAA, FISMA and CFR Part 11</span></li> </ul> <p>Jump to the <a href="#integrations">full list of integrations</a>.</p> <a href="https://www.labkey.com/request-demo/" target="_self" class="btn btn-primary "><span>Get a Demo</span></a> </div> </div> </section> <section class="half-info-icon-list-image"> <div class="content-area"> <div class="title-area"> <h2>Import and align virtually any type of data source, from any source.</h2> </div> <div class="half-info-icon-list-box"> <div class="top-icon-info"> <h3>Assay Data Integration</h3> </div> <h3>Capture structured data from lab instruments and harmonize with related R&D data.<br class="d-none d-xl-block"> </h3> <ul class="tourial-last-focused"> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Support for mass spectrometry, Luminex, flow cytometry, proteomics and other instrument types</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Generate unique assay design to provide structure and context for tabular instrument data</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Use scripts to clean, shape or automate calculation of values during import</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Automate data capture using APIs, script-based pipelines and file upload triggers</span></li> </ul> </div> <div class="half-info-icon-list-box"> <div class="top-icon-info"> <h3>Quality Control</h3> </div> <h3>Improve data integrity with quality control tools, workflows and automation.<br class="d-none d-xl-block"> </h3> <ul> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Use data validators and range checks to verify data integrity and accuracy</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Use quality control reports to track key QC metrics </span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Automate quality control checks and data cleanup measures </span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Define QC workflows to support your internal processes and standards</span></li> </ul> </div> <div class="half-info-icon-list-box"> <div class="top-icon-info"> <h3>Data Transformation & Alignment</h3> </div> <h3>Transform data to achieve alignment between disparate data sources.<br class="d-none d-xl-block"> </h3> <ul> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Use Python, R, or Java scripting to clean, shape or automate the calculation of values </span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Attach sequential scripts to assay designs to run multiple transformations and reshape data files prior to import </span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Use ontologies to reconcile data with controlled vocabularies to aligning terms, hierarchies, and the meaning of specific data columns and values</span></li> </ul> </div> <div class="half-info-icon-list-box"> <div class="top-icon-info"> <h3>Study Data</h3> </div> <h3>Connect longitudinal study data with related assay and sample data. <br class="d-none d-xl-block"> </h3> <ul> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Integrating clinical and demographic data for participants, cohorts, and groups</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Organize and manage longitudinal study data in a central, secure environment for more efficient curation, analysis, and publishing.</span></li> <li style="font-weight: 400;" aria-level="1"><span style="font-weight: 400;">Manage access to study data at all phases from operational execution to post-publication.</span></li> </ul> </div> </div> </section> <section class="cta-overflow-img"> <div class="background-image"> <img src="https://www.labkey.com/wp-content/themes/labkey/images/cta-overflow-bg.png" alt="cta overflow bg" class="img-fluid"> </div> <div class="content-area"> <div class="left-area"> <h5>Ready for a Demo?</h5> <h2>Click below to book a demo of the LabKey Server SDMS.</h2> <a style="" href="https://www.labkey.com/request-demo/" target="_self" class="btn btn-primary unset-width Testing"><span>Get a Demo</span></a> </div> <div class="right-area"> <img src="https://www.labkey.com/wp-content/uploads/2022/05/solutions-img-1.png" alt="SDMS Software" class="img-fluid"> </div> </div> </section> <style type="text/css"> .labkey-server-table .content-area .table-area table tbody tr td{ text-align: left; } </style> <section class="labkey-server-table" id="integrations"> <div class="content-area"> <div class="table-area table-responsive"> <table class="table"> <thead> <th> <h2>LabKey Server SDMS Integrations</h2> </th> </thead> <tbody> <tr class="row-title"> <td colspan="5">Assays</td> </tr> <tr > <td> Standard Assays </td> <td>Import any type of tabular data using custom assay designs. </td> <td></td> <td></td> <td></td> </tr> <tr > <td> ELISA </td> <td>LabKey Server features graphical plate configuration for your experiments.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> ELISpot </td> <td>LabKey Server features graphical plate configuration for your experiments.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">Fluorospot<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>The current implementation uses the AID MultiSpot reader.</p> </div> </div> </div> </td> <td>LabKey Server features graphical plate configuration for your experiments. </td> <td></td> <td></td> <td></td> </tr> <tr > <td> Flow Cytometry - FlowJo </td> <td>Analyze FCS files using a FlowJo workspace.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Luminex </td> <td>Import multiplexed bead arrays based on xMap technology.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">Mass Spectrometry<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>Perform validations with PeptideProphet and ProteinProphet and quantitation scores using XPRESS or Q3.</p> </div> </div> </div> </td> <td>Perform searches against FASTA sequence databases using XTandem, Sequest, Mascot, or Comet. </td> <td></td> <td></td> <td></td> </tr> <tr class="no-border"> <td> NAb </td> <td>Low- and high-throughput, cross plate, and multi-virus plates are supported.</td> <td></td> <td></td> <td></td> </tr> <tr class="separator"> <td colspan="5"></td> </tr> <tr class="row-title"> <td colspan="5">Software</td> </tr> <tr > <td> Scripting Languages </td> <td>LabKey Server supports all major scripting languages, including R, Java, SAS, JavaScript, and Python.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Access </td> <td>Use Microsoft Access tools on data housed in LabKey using an ODBC connection.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">Excel<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>You can also connect any LabKey data back to Microsoft Excel via an ODBC connection.</p> </div> </div> </div> </td> <td>Excel spreadsheet data can be loaded into LabKey for integration and analysis. </td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">R<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>Display the results of an R script inside your LabKey Server applications with the results updating as the underlying data changes.</p> </div> </div> </div> </td> <td>Make LabKey a client of your R installation, or make R a client of the data in LabKey Server. </td> <td></td> <td></td> <td></td> </tr> <tr > <td> RStudio </td> <td>Use RStudio to design and save reports.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> RStudio Workbench </td> <td>Connect to an RStudio Workbench installation.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Rserve </td> <td>Execute R reports against a remote Rserve instance.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Tableau </td> <td>Visualize LabKey data in Tableau via an ODBC connection.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Spotfire </td> <td>Use the JDBC driver to access LabKey data from Spotfire</td> <td></td> <td></td> <td></td> </tr> <tr > <td> MATLAB </td> <td></td> <td></td> <td></td> <td></td> </tr> <tr > <td> Plotly Dash </td> <td>Supported via HTTP proxy. </td> <td></td> <td></td> <td></td> </tr> <tr > <td> REDCap </td> <td>Synchronize with data in a REDCap server.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Informatica EDC </td> <td>Uses the JDBC driver to access LabKey data </td> <td></td> <td></td> <td></td> </tr> <tr > <td> OpenEMPI </td> <td>Connect LabKey data to an Enterprise Master Patient Index.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Medidata Rave / CDISC ODM </td> <td>Connect directly with, and import data from Medidata Rave servers.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Skyline </td> <td>Integrate with the Skyline targeted mass spectrometry tool</td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">Trans Proteomic Pipeline (TPP)<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>Tools include XTandem, Comet, PeptideProphet, ProteinProphet, XPRESS, Q3, and Libra</p> </div> </div> </div> </td> <td>Analyze mass spectrometry proteomics tools and view their results.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> <div class="with-info">Protein Annotation Databases<div class="info-popup"> <span><img src="https://www.labkey.com/wp-content/themes/labkey/images/svg/table-info.svg" alt="table-info" class="img-fluid"></span> <div class="popup-content"> <p>Databases include UniProtKB Species Suffix Map, SwissProt, TrEMBL, Gene Ontology Database and FASTA.</p> </div> </div> </div> </td> <td>Data in publicly available databases can be synced and combined with your Mass Spec data.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Jupyter Notebook </td> <td>Create and share computational documents.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> DbVisualize </td> <td>Uses the JDBC driver to access LabKey data.</td> <td></td> <td></td> <td></td> </tr> <tr class="no-border"> <td> Mascot </td> <td>Work with Mascot server data.</td> <td></td> <td></td> <td></td> </tr> <tr class="separator"> <td colspan="5"></td> </tr> <tr class="row-title"> <td colspan="5">Databases</td> </tr> <tr > <td> PostgreSQL </td> <td>Configure PostgreSQL as a primary or external data source.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Amazon S3 </td> <td>Configure Amazon S3 as a primary or external data source.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> SAS </td> <td>Configure SAS as an external data source.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> Oracle </td> <td>Configure Oracle as an external data source.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> MySQL </td> <td>Configure MySQL as an external data source.</td> <td></td> <td></td> <td></td> </tr> <tr class="no-border"> <td> Amazon Redshift </td> <td>Configure an Amazon Redshift database as an external data source.</td> <td></td> <td></td> <td></td> </tr> <tr class="separator"> <td colspan="5"></td> </tr> <tr class="row-title"> <td colspan="5">Authentication</td> </tr> <tr > <td> LDAP </td> <td>Configure authentication with an existing LDAP server.</td> <td></td> <td></td> <td></td> </tr> <tr > <td> CAS </td> <td>Configure single sign-on using CAS </td> <td></td> <td></td> <td></td> </tr> <tr > <td> SAML </td> <td>Configure authentication against a SAML provider.</td> <td></td> <td></td> <td></td> </tr> <tr class="no-border"> <td> Duo </td> <td>Configure two-factor authentication via the Duo service</td> <td></td> <td></td> <td></td> </tr> </tbody> </table> </div> </div> </section> <section class="icon-link-three-column"> <div class="background-image"> <img src="https://www.labkey.com/wp-content/themes/labkey/images/bg-pattern-right.png" alt="pattern right" class="img-fluid"> </div> <div class="content-area"> <div class="title-area"> <h3>Continue Exploring the LabKey Server SDMS:</h3> </div> <div class="icon-link-boxes"> <div class="icon-link-box"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/Next-Feature.png" alt="Next" class="img-fluid"> <h3>Visualization & Reports</h3> <a href="https://www.labkey.com/products-services/labkey-server/data-visualization-reporting/" target="_self" class="stretched-link testing1"><span class="visually-hidden">link 1</span></a> </div> <div class="icon-link-box"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/Next-Feature.png" alt="Next" class="img-fluid"> <h3>Security & Compliance</h3> <a href="https://www.labkey.com/products-services/labkey-server/security-compliance/" target="_self" class="stretched-link "><span class="visually-hidden">link 1</span></a> </div> <div class="icon-link-box"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/Next-Feature.png" alt="Next" class="img-fluid"> <h3>Developer Tools</h3> <a href="https://www.labkey.com/products-services/labkey-server/developer-tools/" target="_self" class="stretched-link "><span class="visually-hidden">link 1</span></a> </div> </div> <div class="button-area"> <a href="https://www.labkey.com/products-services/labkey-server/" target="_self" class="btn btn-primary "><span>Back to Server SDMS</span></a> </div> </div> </section> <section id="row6" class="labkey-success padding-bottom-large" style="background-color:#f6f6f6;"> <div class="content-area"> <div class="title-area"> <h2>Learn more about LabKey Server SDMS</h2> </div> <div class="post-grid-area"> <div class="top-title-link"> <h3>Hear from our users:</h3> </div> <div class="post-grid-boxes "> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/nestle.png" alt="Nestle Research" class="img-fluid" width="164px"> </div> <p>Assay and Study Management at Nestlé Research</p> <a href="https://www.labkey.com/user-presentations/assay-study-management-nestle/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a href="https://www.labkey.com/user-presentations/assay-study-management-nestle/" class="stretched-link"><span class="visually-hidden">learnmore</span></a> </div> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/inzen.png" alt="Inzen Therapeutics" class="img-fluid" width="200px"> </div> <p>Benchling & LabKey at Inzen Therapeutics</p> <a href="https://www.labkey.com/user-presentations/inzen-therapeutics/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a href="https://www.labkey.com/user-presentations/inzen-therapeutics/" class="stretched-link"><span class="visually-hidden">learnmore</span></a> </div> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/OHSU.png" alt="OHSU" class="img-fluid" width="200px"> </div> <p>Data Management in Precision Oncology at OHSU</p> <a href="https://www.labkey.com/user-presentations/data-management-precision-oncology-ohsu/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a href="https://www.labkey.com/user-presentations/data-management-precision-oncology-ohsu/" class="stretched-link"><span class="visually-hidden">learnmore</span></a> </div> </div> </div> <div class="post-grid-area"> <div class="top-title-link"> <h3>Case Studies:</h3> </div> <div class="post-grid-boxes grey-white"> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/city-of-hope.png" alt="City of Hope" class="img-fluid" width="184px"> </div> <p>Supporting Precision Medicine at City of Hope</p> <a href="https://www.labkey.com/case-study/city-of-hope/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a href="https://www.labkey.com/case-study/city-of-hope/" class="stretched-link"><span class="visually-hidden">learnmore</span></a> </div> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/fred-hutch.png" alt="Fred Hutch" class="img-fluid" width="200px"> </div> <p>Optide-Hunter at the Fred Hutchinson Cancer Research Center</p> <a href="https://www.labkey.com/case-study/optide-hunter/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a href="https://www.labkey.com/case-study/optide-hunter/" class="stretched-link"><span class="visually-hidden">learnmore</span></a> </div> <div class="post-grid-box "> <div class="image-area" style="background-color: #ffffff"> <img src="https://www.labkey.com/wp-content/uploads/2022/06/wisconsin.png" alt="University of Wisconsin" class="img-fluid" width="200px"> </div> <p>O’Connor LabKey Server</p> <a href="https://www.labkey.com/case-study/oconnor-labkey-server/" class="btn btn-animate-arrow animate-blue"> <div class="arrow-box"></div> Learn more </a> <a 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