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This is another way to import data when doing bulk runs of a workflow."/><meta name="description" content="Every workflow in Latch allows you to import a CSV containing values for its parameters. This is another way to import data when doing bulk runs of a workflow."/><title>CSV Parameter Import - LatchBio</title><meta name="og:url" content="/workflows/csv-import"/><link rel="canonical" href="/workflows/csv-import"/><meta name="next-head-count" content="25"/><link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/katex@0.16.0/dist/katex.min.css" integrity="sha384-Xi8rHCmBmhbuyyhbI88391ZKP2dmfnOl4rT9ZfRI7mLTdk1wblIUnrIq35nqwEvC" crossorigin="anonymous"/><link rel="preload" href="/_next/static/media/a34f9d1faa5f3315-s.p.woff2" as="font" type="font/woff2" crossorigin="anonymous" data-next-font="size-adjust"/><link rel="preload" href="/_next/static/media/bb3ef058b751a6ad-s.p.woff2" as="font" type="font/woff2" crossorigin="anonymous" data-next-font="size-adjust"/><script id="mode-toggle" data-nscript="beforeInteractive"> try { if (localStorage.isDarkMode === 'true') { document.documentElement.classList.add('dark'); } else if (localStorage.isDarkMode === 'false') { 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dark:text-gray-400 dark:hover:text-gray-300" href="/registry/what-is-a-registry"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/table.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Registry</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-semibold text-primary dark:text-primary-light" href="/workflows/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary bg-primary"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-white" 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dark:text-gray-400 dark:hover:text-gray-300" href="/plots/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/chart-scatter-bubble.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Plots</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/admin/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/screen-users.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Administration</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/resources/faq"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/clipboard-question.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Resources</a></li><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Overview</h5><ul><li id="/workflows/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/magnifying-glass.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Workflows & SDK</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Workflows</h5><ul><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Verified Workflows</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/csv-import" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg bg-primary/10 text-primary font-semibold dark:text-primary-light dark:bg-primary-light/10" style="padding-left:1rem" href="/workflows/csv-import"><svg class="h-4 w-4 bg-primary dark:bg-primary-light" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/file-import.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>CSV Parameter Import</div></div></a></li><li id="/workflows/resource-monitoring" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/resource-monitoring"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/memory.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Resource Monitoring</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Python SDK</h5><ul><li id="/workflows/sdk/getting-started/quick-start" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/getting-started/quick-start"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/play.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Quick Start</div></div></a></li><li id="/workflows/sdk/getting-started/authorizing-your-own-workflow" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/getting-started/authorizing-your-own-workflow"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/arrow-progress.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Authoring your Own Workflow</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Workflow Concepts</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Testing and Debugging a Workflow</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Nextflow</h5><ul><li id="/workflows/sdk/nextflow/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/magnifying-glass.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Overview</div></div></a></li><li id="/workflows/sdk/nextflow/tutorial" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/tutorial"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/book.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Tutorial</div></div></a></li><li id="/workflows/sdk/nextflow/profiles" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/profiles"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/user.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Execution Profiles</div></div></a></li><li id="/workflows/sdk/nextflow/caching" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/caching"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/window-restore.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Caching and Resuming</div></div></a></li><li id="/workflows/sdk/nextflow/registries" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/registries"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/lock.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Private Registries</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Customizing Your Interface</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/sdk/nextflow/dependencies" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/dependencies"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/arrow-progress.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Dependencies</div></div></a></li><li id="/workflows/sdk/nextflow/gpus" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/gpus"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/microchip.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Using GPU Accelerators</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Snakemake</h5><ul><li id="/workflows/sdk/snakemake/quickstart" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/quickstart"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/play.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Quick Start</div></div></a></li><li id="/workflows/sdk/snakemake/cloud" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/cloud"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/cloud.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Snakemake Workflow Cloud Compatibility</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Advanced Configuration</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/sdk/snakemake/tutorial" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/tutorial"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/book.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Tutorial</div></div></a></li><li id="/workflows/sdk/snakemake/debugging" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/debugging"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/bug-slash.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Debugging Snakemake</div></div></a></li><li id="/workflows/sdk/snakemake/troubleshooting" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/troubleshooting"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/bugs.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Troubleshooting</div></div></a></li><li id="/workflows/sdk/snakemake/backend" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/backend"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/archway.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Architecture Overview</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Automation</h5><ul><li id="/workflows/sdk/automation/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/robot.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Workflows Automations</div></div></a></li><li id="/workflows/sdk/automation/example-data-addition" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/example-data-addition"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/table.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Example Data Addition Trigger</div></div></a></li><li id="/workflows/sdk/automation/example-interval" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/example-interval"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/alarm-snooze.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Example Interval Trigger</div></div></a></li></ul></div></div></div></div></div><div class="" id="content-container"><div class="flex flex-row gap-12 box-border w-full pt-40 lg:pt-10"><div class="relative grow box-border flex-col w-full mx-auto px-1 lg:pl-[23.7rem] lg:-ml-12 xl:w-[calc(100%-28rem)]" id="content-area"><header id="header" class="relative"><div class="mt-0.5 space-y-2.5"><div class="eyebrow h-5 text-primary dark:text-primary-light text-sm font-semibold">Workflows</div><div class="flex items-center"><h1 class="inline-block text-2xl sm:text-3xl font-extrabold text-gray-900 tracking-tight dark:text-gray-200">CSV Parameter Import</h1></div></div><div class="mt-2 text-lg prose prose-gray dark:prose-invert"><p>Every workflow in Latch allows you to import a CSV containing values for its parameters. This is another way to import data when doing bulk runs of a workflow.</p></div></header><div class="flex flex-col gap-8"><div class="flex flex-col gap-6 xl:hidden [&:not(:empty)]:mt-8"></div></div><div class="relative mt-8 prose prose-gray dark:prose-invert"><div class="my-4 px-5 py-4 overflow-hidden rounded-xl flex gap-3 border border-zinc-500/20 bg-zinc-50/50 dark:border-zinc-500/30 dark:bg-zinc-500/10"><div class="mt-0.5 w-4"><svg viewBox="0 0 20 20" fill="currentColor" xmlns="http://www.w3.org/2000/svg" class="flex-none w-5 h-5 text-zinc-400 dark:text-zinc-300" aria-label="Info"><path d="M8 0C3.58125 0 0 3.58125 0 8C0 12.4187 3.58125 16 8 16C12.4187 16 16 12.4187 16 8C16 3.58125 12.4187 0 8 0ZM8 14.5C4.41563 14.5 1.5 11.5841 1.5 8C1.5 4.41594 4.41563 1.5 8 1.5C11.5844 1.5 14.5 4.41594 14.5 8C14.5 11.5841 11.5844 14.5 8 14.5ZM9.25 10.5H8.75V7.75C8.75 7.3375 8.41563 7 8 7H7C6.5875 7 6.25 7.3375 6.25 7.75C6.25 8.1625 6.5875 8.5 7 8.5H7.25V10.5H6.75C6.3375 10.5 6 10.8375 6 11.25C6 11.6625 6.3375 12 6.75 12H9.25C9.66406 12 10 11.6641 10 11.25C10 10.8359 9.66563 10.5 9.25 10.5ZM8 6C8.55219 6 9 5.55219 9 5C9 4.44781 8.55219 4 8 4C7.44781 4 7 4.44687 7 5C7 5.55313 7.44687 6 8 6Z"></path></svg></div><div class="text-sm prose min-w-0 text-zinc-900 dark:text-zinc-200"><p>The goal of this feature is intended to streamline bringing in your experiment data when running workflows into Latch and we would love to hear from you on ways this could be improved. And to be completely honest the best way to use the CSV import is to write a script that will automatically generate a CSV based on your data.</p></div></div> <h2 class="flex whitespace-pre-wrap group" id="preparing-your-csv"><div class="absolute"><a href="#preparing-your-csv" class="-ml-10 flex items-center opacity-0 border-0 group-hover:opacity-100" aria-label="Navigate to header"><div class="w-6 h-6 text-gray-400 rounded-md flex items-center justify-center zinc-box bg-white ring-1 ring-gray-400/30 dark:ring-gray-700/25 hover:ring-gray-400/60 dark:hover:ring-white/20"><svg xmlns="http://www.w3.org/2000/svg" fill="gray" height="12px" viewBox="0 0 576 512"><path d="M0 256C0 167.6 71.6 96 160 96h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C98.1 144 48 194.1 48 256s50.1 112 112 112h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C71.6 416 0 344.4 0 256zm576 0c0 88.4-71.6 160-160 160H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c61.9 0 112-50.1 112-112s-50.1-112-112-112H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c88.4 0 160 71.6 160 160zM184 232H392c13.3 0 24 10.7 24 24s-10.7 24-24 24H184c-13.3 0-24-10.7-24-24s10.7-24 24-24z"></path></svg></div></a></div><span class="cursor-pointer">Preparing Your CSV</span></h2> <ul> <li>Each row of the CVS will be imported as one run of the workflow and each column for that row will be imported to its corresponding parameter.</li> </ul> <p></p> <ul> <li>Each parameter has a column name that the importer can use automatically map them (we don’t expose these anywhere yet but we’re working on it), but CSV columns can also be mapped manually to a parameter.</li> <li>Each parameter has specific formatting requirements to be properly imported. (I’m gonna work on the documentation for all of the formatting standards because this can be a pain to get right.)</li> <li>If you’re exporting it from a spreadsheet application you’re using here are some guides: <ul> <li><a href="https://support.microsoft.com/en-us/office/import-or-export-text-txt-or-csv-files-5250ac4c-663c-47ce-937b-339e391393ba" target="_blank" rel="noreferrer">Excel</a></li> <li><a href="https://support.apple.com/guide/numbers/export-to-excel-or-another-file-format-tan3b922d4ad/mac" target="_blank" rel="noreferrer">Numbers</a></li> <li><a href="https://support.airtable.com/hc/en-us/articles/203423579-How-to-export-a-spreadsheet-from-another-source" target="_blank" rel="noreferrer">Google Sheets</a></li> </ul> </li> </ul> <h3 class="flex whitespace-pre-wrap group" id="adding-file-paths-to-your-csv"><div class="absolute"><a href="#adding-file-paths-to-your-csv" class="-ml-10 flex items-center opacity-0 border-0 group-hover:opacity-100" aria-label="Navigate to header"><div class="w-6 h-6 text-gray-400 rounded-md flex items-center justify-center zinc-box bg-white ring-1 ring-gray-400/30 dark:ring-gray-700/25 hover:ring-gray-400/60 dark:hover:ring-white/20"><svg xmlns="http://www.w3.org/2000/svg" fill="gray" height="12px" viewBox="0 0 576 512"><path d="M0 256C0 167.6 71.6 96 160 96h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C98.1 144 48 194.1 48 256s50.1 112 112 112h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C71.6 416 0 344.4 0 256zm576 0c0 88.4-71.6 160-160 160H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c61.9 0 112-50.1 112-112s-50.1-112-112-112H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c88.4 0 160 71.6 160 160zM184 232H392c13.3 0 24 10.7 24 24s-10.7 24-24 24H184c-13.3 0-24-10.7-24-24s10.7-24 24-24z"></path></svg></div></a></div><span class="cursor-pointer">Adding File Paths to your CSV</span></h3> <p>If one of the columns in your CSV requires a file path, you have to ensure that the file path matches that on Latch.</p> <div role="list" class="ml-3.5 mt-10 mb-6"><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-gray-200/70 dark:bg-white/10"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">1</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">To do so, click on the file you are interested in.</p><div></div></div></div><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-gray-200/70 dark:bg-white/10"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">2</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">On the right sidebar, select “Copy” to copy the file path of your file.</p><div></div></div></div><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-transparent bg-gradient-to-b from-gray-200 dark:from-white/10 via-80% to-transparent"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">3</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">Paste the file path into the CSV.</p><div></div></div></div></div> <h2 class="flex whitespace-pre-wrap group" id="using-csv-import"><div class="absolute"><a href="#using-csv-import" class="-ml-10 flex items-center opacity-0 border-0 group-hover:opacity-100" aria-label="Navigate to header"><div class="w-6 h-6 text-gray-400 rounded-md flex items-center justify-center zinc-box bg-white ring-1 ring-gray-400/30 dark:ring-gray-700/25 hover:ring-gray-400/60 dark:hover:ring-white/20"><svg xmlns="http://www.w3.org/2000/svg" fill="gray" height="12px" viewBox="0 0 576 512"><path d="M0 256C0 167.6 71.6 96 160 96h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C98.1 144 48 194.1 48 256s50.1 112 112 112h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C71.6 416 0 344.4 0 256zm576 0c0 88.4-71.6 160-160 160H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c61.9 0 112-50.1 112-112s-50.1-112-112-112H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c88.4 0 160 71.6 160 160zM184 232H392c13.3 0 24 10.7 24 24s-10.7 24-24 24H184c-13.3 0-24-10.7-24-24s10.7-24 24-24z"></path></svg></div></a></div><span class="cursor-pointer">Using CSV Import</span></h2> <p>CSV Import is not available for Bulk RNAseq, which instead has the option of using Salmon’s selective alignment method and sample conditions for differential expression analysis.</p> <div role="list" class="ml-3.5 mt-10 mb-6"><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-gray-200/70 dark:bg-white/10"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">1</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">Click the 'Import Bulk Data' button at the top right of the workflow parameters section.</p><div><p>Some Workflows also have a CSV template you can use to import your data.</p></div></div></div><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-gray-200/70 dark:bg-white/10"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">2</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">Select your CSV from your data on Latch.</p><div><p>or select from your computer</p></div></div></div><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-gray-200/70 dark:bg-white/10"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">3</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">The importer will then automatically try to match the columns in your CSV to its corresponding parameter. </p><div><p>When a column is matched to a parameter it will either show:</p><ol> <li>A green check mark which means all of values in that column have passed the validation and are formatted correctly for that parameter.</li> </ol><p>— or —</p><ol start="2"> <li>A red warning triangle which means that some of the data in the matched column is formatted incorrectly for that parameter.</li> </ol><p>Any errors can be fixed in the next step.</p><p>If the importer is unable to automatically match a column it won’t display any icon. You can manually map it to a parameter by clicking the input and selecting its corresponding parameter.</p></div></div></div><div role="listitem" class="relative flex items-start pb-2"><div class="absolute w-px h-[calc(100%-2.75rem)] top-[2.75rem] bg-transparent bg-gradient-to-b from-gray-200 dark:from-white/10 via-80% to-transparent"></div><div class="absolute ml-[-14px] py-2"><div class="w-7 h-7 shrink-0 rounded-lg bg-gray-100 dark:text-white dark:bg-[#26292E] text-sm text-gray-800 font-semibold flex items-center justify-center">4</div></div><div class="w-full overflow-hidden pl-12 pr-px"><p class="mt-2 font-semibold prose dark:prose-invert text-gray-900 dark:text-gray-200">You will then be able to review and edit all of the data before importing.</p><div><p>Any cells with errors will be marked with a red warning triangle which you can hover over to view details on the formatting error. 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stroke="currentColor" stroke-width="2" xmlns="http://www.w3.org/2000/svg" class="h-3 w-3"><path d="M2.44434 12.6665H13.5554" stroke-linecap="round" stroke-linejoin="round"></path><path d="M2.44434 3.3335H13.5554" stroke-linecap="round" stroke-linejoin="round"></path><path d="M2.44434 8H7.33323" stroke-linecap="round" stroke-linejoin="round"></path></svg><span>On this page</span></div><ul><li><a href="#preparing-your-csv" class="py-1 block font-medium hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300">Preparing Your CSV</a></li><li style="margin-left:1rem"><a href="#adding-file-paths-to-your-csv" class="group flex items-start py-1 whitespace-pre-wrap text-gray-500 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300">Adding File Paths to your CSV</a></li><li><a href="#using-csv-import" class="py-1 block font-medium hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300">Using CSV Import</a></li></ul></div></div></div></div></div></div></main></div><script id="__NEXT_DATA__" type="application/json">{"props":{"pageProps":{"mdxSource":{"compiledSource":"/*@jsxRuntime automatic @jsxImportSource react*/\nconst {Fragment: _Fragment, jsx: _jsx, jsxs: _jsxs} = arguments[0];\nconst {useMDXComponents: _provideComponents} = arguments[0];\nfunction _createMdxContent(props) {\n const _components = Object.assign({\n p: \"p\",\n ul: \"ul\",\n li: \"li\",\n img: \"img\",\n a: \"a\",\n ol: \"ol\"\n }, _provideComponents(), props.components), {Info, Heading, Steps, Step, ZoomImage} = _components;\n if (!Heading) _missingMdxReference(\"Heading\", true);\n if (!Info) _missingMdxReference(\"Info\", true);\n if (!Step) _missingMdxReference(\"Step\", true);\n if (!Steps) _missingMdxReference(\"Steps\", true);\n if (!ZoomImage) _missingMdxReference(\"ZoomImage\", true);\n return _jsxs(_Fragment, {\n children: [_jsx(Info, {\n children: _jsx(_components.p, {\n children: \"The goal of this feature is intended to streamline bringing in your experiment\\ndata when running workflows into Latch and we would love to hear from you on\\nways this could be improved. And to be completely honest the best way to use\\nthe CSV import is to write a script that will automatically generate a CSV\\nbased on your data.\"\n })\n }), \"\\n\", _jsx(Heading, {\n level: \"2\",\n id: \"preparing-your-csv\",\n children: \"Preparing Your CSV\"\n }), \"\\n\", _jsxs(_components.ul, {\n children: [\"\\n\", _jsx(_components.li, {\n children: \"Each row of the CVS will be imported as one run of the workflow and each column for that row will be imported to its corresponding parameter.\"\n }), \"\\n\"]\n }), \"\\n\", _jsx(_components.p, {\n children: _jsx(_components.img, {\n src: \"https://mintlify.s3-us-west-1.amazonaws.com/latchbio/images/frame5.png\",\n alt: \"\"\n })\n }), \"\\n\", _jsxs(_components.ul, {\n children: [\"\\n\", _jsx(_components.li, {\n children: \"Each parameter has a column name that the importer can use automatically map them (we don’t expose these anywhere yet but we’re working on it), but CSV columns can also be mapped manually to a parameter.\"\n }), \"\\n\", _jsx(_components.li, {\n children: \"Each parameter has specific formatting requirements to be properly imported. 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