CINXE.COM
AmiGO 2: Term Details for "transcription by RNA polymerase V" (GO:0001060)
<!DOCTYPE html> <!-- START template: head_open.tmpl --> <html lang="en"> <head> <meta charset="utf-8"> <meta http-equiv="content-type" content="text/html; charset=utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="description" content="AmiGO 2"> <meta name="author" content="Gene Ontology Consortium"> <!-- <meta name="html_url" content="https://amigo.geneontology.org/static"> --> <link rel="shortcut icon" href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> <link rel="icon" href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> <title>AmiGO 2: Term Details for "transcription by RNA polymerase V" (GO:0001060)</title> <!-- <link rel="icon" --> <!-- type="image/x-icon" --> <!-- href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> --> <!-- END template: head_open.tmpl --> <link rel="stylesheet" type="text/css" href="https://amigo.geneontology.org/static/css/bootstrap.min.css"> <link rel="stylesheet" type="text/css" href="https://amigo.geneontology.org/static/js/com/jquery/css/jqamigo-1.10.3/jquery-ui-1.10.3.custom.min.css"> <link rel="stylesheet" type="text/css" href="https://amigo.geneontology.org/static/css/amigo.css"> <link rel="stylesheet" type="text/css" href="https://amigo.geneontology.org/static/css/bbop.css"> <script type="text/javascript" src="https://amigo.geneontology.org/static/js/com/jquery-1.9.1.min.js"></script> <script type="text/javascript" src="https://amigo.geneontology.org/static/js/com/bootstrap.min.js"></script> <script type="text/javascript" src="https://amigo.geneontology.org/static/js/com/jquery-ui-1.10.3.custom.min.js"></script> <script type="text/javascript" src="https://amigo.geneontology.org/static/js/com/jquery.tablesorter.min.js"></script> <script type="text/javascript" src="https://amigo.geneontology.org/static/staging/GeneralSearchForwarding.js"></script> <script type="text/javascript" src="https://amigo.geneontology.org/static/staging/TermDetails.js"></script> <script type="text/javascript">var global_live_search_query = null;</script> <script type="text/javascript">var global_live_search_filters = [];</script> <script type="text/javascript">var global_live_search_pins = [];</script> <script type="text/javascript">var global_label = "transcription by RNA polymerase V";</script> <script type="text/javascript">var global_acc = "GO:0001060";</script> <script type="text/javascript">var global_default_relation = "isa_partof";</script> <!-- START template: head_close.tmpl --> </head> <!-- END template: head_close.tmpl --> <!-- START template: body_open.tmpl --> <body> <!-- END template: body_open.tmpl --> <!-- START template: header.tmpl --> <!-- page_name = term --> <!-- image_dir = https://amigo.geneontology.org/static/images --> <!-- show_blast = --> <!-- bookmark = --> <!-- session_id = --> <!-- session_id_for_url = session_id= --> <div class="navbar navbar-default navbar-static-top"> <div class="container"> <!-- Button on collapse. --> <div class="navbar-header"> <button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".navbar-collapse"> <span class="icon-bar"></span> <span class="icon-bar"></span> <span class="icon-bar"></span> </button> <a class="amigo-logo-img-link" href="http://geneontology.org"><img class="amigo-logo-img" src="https://amigo.geneontology.org/static/images/go-logo-icon.small.png" alt="GO logo" title="Gene Ontology front page"></a> <a class="navbar-brand" href="https://amigo.geneontology.org/amigo/landing">AmiGO 2</a> </div> <div class="navbar-collapse collapse"> <ul class="nav navbar-nav"> <!-- Home. --> <li><a href="https://amigo.geneontology.org/amigo/landing" title="The AmiGO 2 landing page.">Home</a></li> <!-- The various searches. --> <li class="dropdown"> <a href="#" class="dropdown-toggle" data-toggle="dropdown">Search <b class="caret"></b></a> <ul class="dropdown-menu"> <li><a href="https://amigo.geneontology.org/amigo/search/annotation" title="Associations between GO terms and genes or gene products.">Annotations</a></li> <!-- annotation --> <!-- Annotations --> <!-- Associations between GO terms and genes or gene products. --> <!-- https://amigo.geneontology.org/amigo/search/annotation --> <li><a href="https://amigo.geneontology.org/amigo/search/ontology" title="Gene Ontology Term, Synonym, or Definition.">Ontology</a></li> <!-- ontology --> <!-- Ontology --> <!-- Gene Ontology Term, Synonym, or Definition. --> <!-- https://amigo.geneontology.org/amigo/search/ontology --> <li><a href="https://amigo.geneontology.org/amigo/search/bioentity" title="Genes and gene products associated with GO terms.">Genes and gene products</a></li> <!-- bioentity --> <!-- Genes and gene products --> <!-- Genes and gene products associated with GO terms. --> <!-- https://amigo.geneontology.org/amigo/search/bioentity --> </ul> </li> <!-- Browse. --> <li><a href="https://amigo.geneontology.org/amigo/dd_browse" title="Browse GO terms and view annotation counts.">Browse</a></li> <!-- Software list. --> <li><a href="https://amigo.geneontology.org/amigo/software_list" title="More tools to explore the Gene Ontology">Tools & Resources</a></li> <!-- Help. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Term_Page" title="Help for 'transcription by RNA polymerase V'">Help</a></li> <!-- Feedback. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2:_Feedback" title="Give feedback on AmiGO 2">Feedback</a></li> <!-- About. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2" title="About AmiGO 2">About</a></li> </ul> <!-- START template: header_search.tmpl --> <!-- page_name = term --> <form action="https://amigo.geneontology.org/amigo/medial_search" id="query-form" class="navbar-form navbar-right" role="search" method="GET"> <div class="form-group"> <input type="text" title="Hint: add a space after completing a word to narrow the search." class="form-control bbop-js-tooltip" name="q" placeholder="Quick search" value="" id="gsf-query"> </div> <button type="submit" title="Search for annotations with the inputted text." class="btn btn-default">Search</button> <!-- Begin: autocomplete_help_link.tmpl --> <!-- Begin: abstract_help_link.tmpl --> <a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Quick_Search" title="More information on Quick Search" class=""><span class="glyphicon glyphicon-question-sign"></span> </a> <!-- End: abstract_help_link.tmpl --> <!-- End: autocomplete_help_link.tmpl --> </form> <!-- END template: header_search.tmpl --> <!-- <p class="navbar-text navbar-right"> --> <!-- <a href="http://geneontology.org"><img class="logo-img" style="height: 50px;" src="https://amigo.geneontology.org/static/images/go-logo-icon.small.png" alt="GO logo" title="Gene Ontology front page"></a> --> <!-- </p> --> <!-- <p> --> <!-- <a href="http://geneontology.org" class="navbar-link">GO</a> --> <!-- </p> --> </div> </div> </div> <!-- END template: header.tmpl --> <!-- START template: content_open.tmpl --> <div class="container amigo-ui-wide-max"> <!-- END template: content_open.tmpl --> <!-- START template: content_title.tmpl --> <div class="page-header"> <h1> transcription by RNA polymerase V</h1> </div> <!-- END template: content_title.tmpl --> <!-- START template: term_details.tmpl --> <!-- START: noscript_js_limited.tmpl --> <noscript> <div class="panel panel-warning"> <div class="panel-heading"> <h3 class="panel-title">Notice</h3> </div> <div class="panel-body"> <p> Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page. </p> </div> </div> </noscript> <!-- END: noscript-js-limited.tmpl --> <!-- START template: term_details_main.tmpl --> <div class="panel panel-default"> <div class="panel-heading"> <h3 class="panel-title"> Term Information <!-- Begin: abstract_help_link.tmpl --> <a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Term_Page" title="More information on using this page" class=""><span class="glyphicon glyphicon-question-sign"></span> </a> <!-- End: abstract_help_link.tmpl --> </h3> </div> <div class="panel-body"> <!-- <div style="padding-bottom: 3px;"> --> <div style="float:right;"> <a class="bbop-js-tooltip" title="Let us know if there are any additions, concerns, or other issues that you'd like to share about this data." href="http://help.geneontology.org"> <span class="label label-primary">Feedback <span class="glyphicon glyphicon-heart"></span> </span> </a> </div> <dl class="dl-horizontal amigo-detail-info"> <!-- Acc, name, and ont. --> <dt>Accession</dt> <dd>GO:0001060</dd> <dt>Name</dt> <dd>transcription by RNA polymerase V</dd> <dt>Ontology</dt> <dd>biological_process</dd> <!-- <dt>ID Space</dt> --> <!-- <dd>GO</dd> --> <!-- Synonyms --> <dt>Synonyms</dt> <dd id="syn-collapse-syn" class="syn-collapsible">transcription from RNA pol V promoter, transcription from RNA polymerase V promoter</dd> <!-- Alternate IDs --> <dt>Alternate IDs</dt> <dd>None</dd> <!-- Definition --> <dt>Definition</dt> <dd>The synthesis of RNA from a DNA template by RNA polymerase V, originating at a Pol V-specific promoter. <em>Source:</em> <cite><a title="Go to PMID:19110459" href="http://www.ncbi.nlm.nih.gov/pubmed/19110459">PMID:19110459</a></cite>, <cite>GOC:txnOH</cite> </dd> <!-- Comment. --> <dt>Comment</dt> <dd>None</dd> <!-- Optional GO history. --> <dt>History</dt> <dd>See term <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001060#term=history" title="See term history.">history for GO:0001060</a> at QuickGO</dd> <!-- Taxon constraints. --> <!-- <dt>Taxon info</dt> --> <!-- --> <!-- <dd>None</dd> --> <!-- --> <!-- Chemical reaction participants. --> <dt>Chem. react.</dt> <dd>None</dd> <!-- Subsets --> <dt>Subset</dt> <dd>None</dd> <!-- JS dynamic links created by manager. --> <dt id="prob_related" class="hidden">Related</dt> <dd id="prob_bio" class="hidden"> <a id="prob_bio_href" href="#" class="btn btn-primary btn-xs">Link</a> to all <strong>genes and gene products</strong> annotated to transcription by RNA polymerase V (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann" class="hidden"> <a id="prob_ann_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations</strong> to transcription by RNA polymerase V (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann_dl" class="hidden"> <a id="prob_ann_dl_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations download</strong> (limited to first 10,000) for transcription by RNA polymerase V (<strong>excluding "regulates"</strong>). </dd> <!-- <\!-- -\-> --> <!-- <dt>Feedback</dt> --> <!-- <dd> --> <!-- Contact the --> <!-- <a href="http://help.geneontology.org" title="GO Helpdesk.">GO Helpdesk</a> --> <!-- if you find mistakes or have concerns --> <!-- about the data you find here. --> <!-- </dd> --> </dl> <div> <a href="/amigo/term/GO:0001060?relation=regulates" class="btn btn-primary"> Include "regulates"</a> <br />For more information, please see the <a href="http://geneontology.org/docs/ontology-relations/">ontology relation documentation</a>. </div> </div> </div> <!-- END template: term_details_main.tmpl --> <!-- Hrm... --> <!-- Display tabbing. --> <ul id="display-tabs" class="nav nav-tabs"> <!-- NOTE: As of RC3, "active" did not work, so still tabbed from JS. --> <!-- <li class="active"> --> <li> <a href="#display-associations-tab" data-toggle="tab">Annotations</a> </li> <li> <a href="#display-graphics-tab" data-toggle="tab">Graph Views</a> </li> <li> <a href="#display-lineage-tab" data-toggle="tab">Inferred Tree View</a> </li> <li> <!-- <a href="#display-sentences-tab" data-toggle="tab">Ancestors and Children</a> --> <a href="#display-sentences-tab" data-toggle="tab">Neighborhood</a> </li> <li> <a href="#display-xref-tab" data-toggle="tab">Mappings</a> </li> <!-- <li> --> <!-- <a href="#display-out-tab" data-toggle="tab">Other Views</a> --> <!-- </li> --> <!-- <li> --> <!-- <a href="#display-down-tab" data-toggle="tab">Downloads</a> --> <!-- </li> --> </ul> <div class="tab-content"> <!-- <div class="container"> --> <!-- </div> --> <div id="display-associations-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer amigo-live-search-results-unbounder"> <div class="panel-body"> <!-- START template: annotation_search.tmpl --> <div id="results-area" class="row"> <div class="col-xs-12 col-sm-12 col-md-3 col-lg-3"> <div> <h4>Filter results</h4> <div id="accordion" class="bbop-widget-set-live-filters"> Loading... </div> </div> </div> <div class="col-xs-12 col-sm-12 col-md-9 col-lg-9"> <div id="pager" class="bbop-widget-set-live-pager"></div> <div id="results" class="bbop-widget-set-live-results"> pending... </div> </div> </div> <!-- END template: annotation_search.tmpl --> </div> </div> </div> <div id="display-graphics-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_graphics.tmpl --> <h5> View this term in <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001060" title="Go to the QuickGO term page for GO:0001060">QuickGO</a>. </h5> <p> <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0001060" title="Go to the QuickGO term page for GO:0001060"> <img src="https://amigo.geneontology.org/visualize?mode=quickgo&inline=false&term=GO:0001060&beta=0" alt="Graph of GO:0001060 from QuickGO" /> </a> </p> <h5>Additional external viewing options</h5> <ul class="list-unstyled"> <li><a href="http://ols.wordvis.com/q=GO:0001060" title="View the graph in the OLSVis viewer">OLSVis (interactive)</a></li> </ul> <h5>Additional internal viewing options</h5> <ul class="list-unstyled"> <!-- TODO: do this with breadcrumbsy string (taken from REST URL) --> <!-- <li>Last action: unknown</li> --> <li><a href="https://amigo.geneontology.org/visualize?mode=amigo&term_data_type=string&term_data=GO%3A0001060&inline=false&format=png" title="View the graph as a static PNG image">Graphical view (PNG)</a></li> <li><a href="https://amigo.geneontology.org/visualize?term_data=GO%3A0001060&term_data_type=string&mode=amigo&format=svg&inline=false" title="View the graph as an interactive SVG+JS document">Graphical view (SVG)</a></li> <!-- One day this will be out of experimental. --> <!-- <li><a href="" --> <!-- title="Navigate the GO, using the current term as a seed">GO Navigation</a></li> --> </ul> <!-- END template: term_details_graphics.tmpl --> </div> </div> </div> <div id="display-lineage-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_lineage.tmpl --> <!-- <h4>Term lineage for transcription by RNA polymerase V, including inferred links:</h4> --> <ul class="list-unstyled"> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e160)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0008150#display-lineage-tab" title="Go to biological_process">GO:0008150 biological_process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873aa50)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0008152#display-lineage-tab" title="Go to metabolic process">GO:0008152 metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a88740028)--> <!-- number_of_spaces = 1--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009987#display-lineage-tab" title="Go to cellular process">GO:0009987 cellular process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e808)--> <!-- number_of_spaces = 1--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0044238#display-lineage-tab" title="Go to primary metabolic process">GO:0044238 primary metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e8f8)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009058#display-lineage-tab" title="Go to biosynthetic process">GO:0009058 biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e118)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0043170#display-lineage-tab" title="Go to macromolecule metabolic process">GO:0043170 macromolecule metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e5f8)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006139#display-lineage-tab" title="Go to nucleobase-containing compound metabolic process">GO:0006139 nucleobase-containing compound metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a88742588)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0009059#display-lineage-tab" title="Go to macromolecule biosynthetic process">GO:0009059 macromolecule biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a88740940)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0090304#display-lineage-tab" title="Go to nucleic acid metabolic process">GO:0090304 nucleic acid metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873e880)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0034654#display-lineage-tab" title="Go to nucleobase-containing compound biosynthetic process">GO:0034654 nucleobase-containing compound biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873dd28)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0141187#display-lineage-tab" title="Go to nucleic acid biosynthetic process">GO:0141187 nucleic acid biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873dcf8)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0016070#display-lineage-tab" title="Go to RNA metabolic process">GO:0016070 RNA metabolic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873fde8)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[Inferred part_of relation]" title="Inferred part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0010467#display-lineage-tab" title="Go to gene expression">GO:0010467 gene expression</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873dda0)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0032774#display-lineage-tab" title="Go to RNA biosynthetic process">GO:0032774 RNA biosynthetic process</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a887401c0)--> <!-- number_of_spaces = 6--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0006351#display-lineage-tab" title="Go to DNA-templated transcription">GO:0006351 DNA-templated transcription</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a891d5610)--> <!-- number_of_spaces = 7--> <!-- override_image = https://amigo.geneontology.org/static/images/term_lineage_wedge.png--> <!-- override_title = Current term--> <!-- override_link = 1--> <!-- override_bold = 1--> <li> <img src="https://amigo.geneontology.org/static/images/term_lineage_wedge.png" alt="[Current term]" title="Current term" /> <span style="font-weight: bold;">GO:0001060 transcription by RNA polymerase V</span> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a891b4548)--> <!-- number_of_spaces = 8--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/negatively_regulates.gif" alt="[negatively_regulates relation]" title="negatively_regulates relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:1904280#display-lineage-tab" title="Go to negative regulation of transcription by RNA polymerase V">GO:1904280 negative regulation of transcription by RNA polymerase V</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873a228)--> <!-- number_of_spaces = 8--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/positively_regulates.gif" alt="[positively_regulates relation]" title="positively_regulates relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:1904281#display-lineage-tab" title="Go to positive regulation of transcription by RNA polymerase V">GO:1904281 positive regulation of transcription by RNA polymerase V</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873a108)--> <!-- number_of_spaces = 8--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/regulates.gif" alt="[regulates relation]" title="regulates relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:1904279#display-lineage-tab" title="Go to regulation of transcription by RNA polymerase V">GO:1904279 regulation of transcription by RNA polymerase V</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x557a8873a198)--> <!-- number_of_spaces = 8--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/part_of.gif" alt="[part_of relation]" title="part_of relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0001058#display-lineage-tab" title="Go to RNA polymerase V activity">GO:0001058 RNA polymerase V activity</a> </li> <!-- END template: term_details_entry.tmpl --> </ul> <!-- END template: term_details_lineage.tmpl --> </div> </div> </div> <div id="display-sentences-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_sentences.tmpl --> <h5 class="text-center"> Parents of transcription by RNA polymerase V (GO:0001060) </h5> <table id="all-table-above" class="table table-striped table-hover"> <!-- START template: term_details_neighborhood_head.tmpl --> <thead> <tr> <th style="width: 42%">subject<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by subject" alt="[Reorder by subject]" /></th> <th style="width: 16%">relation<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by relation" alt="[Reorder by relation]" /></th> <th style="width: 42%">object<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by object" alt="[Reorder by object]" /></th> </tr> </thead> <!-- END template: term_details_neighborhood_head.tmpl --> <tbody> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x557a891d5610) --> <!-- object_chunk = HASH(0x557a891adab0) --> <!-- even_odd_rows = 0 --> <!-- munge_id_tail = _a --> <!-- count_type = object --> <tr class=""> <td> transcription by RNA polymerase V </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> is_a </span> </td> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0006351" title="Go to DNA-templated transcription">DNA-templated transcription (GO:0006351)</a> </td> </tr> <!-- END template: term_details_re_row.tmpl --> </tbody> </table> <h5 class="text-center"> Children of transcription by RNA polymerase V (GO:0001060) </h5> <table id="all-table-below" class="table table-striped table-hover"> <!-- START template: term_details_neighborhood_head.tmpl --> <thead> <tr> <th style="width: 42%">subject<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by subject" alt="[Reorder by subject]" /></th> <th style="width: 16%">relation<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by relation" alt="[Reorder by relation]" /></th> <th style="width: 42%">object<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by object" alt="[Reorder by object]" /></th> </tr> </thead> <!-- END template: term_details_neighborhood_head.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x557a8873a240) --> <!-- object_chunk = HASH(0x557a891d5610) --> <!-- even_odd_rows = 1 --> <!-- munge_id_tail = _a --> <!-- count_type = subject --> <tr class=""> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:1904280" title="Go to negative regulation of transcription by RNA polymerase V">negative regulation of transcription by RNA polymerase V (GO:1904280)</a> </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/RO:0002212.gif" alt="[RO:0002212 relation]" title="RO:0002212 relation" /> RO:0002212 </span> </td> <td> transcription by RNA polymerase V </td> </tr> <!-- END template: term_details_re_row.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x557a88742618) --> <!-- object_chunk = HASH(0x557a891d5610) --> <!-- even_odd_rows = 2 --> <!-- munge_id_tail = _a --> <!-- count_type = subject --> <tr class=""> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:1904279" title="Go to regulation of transcription by RNA polymerase V">regulation of transcription by RNA polymerase V (GO:1904279)</a> </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/RO:0002211.gif" alt="[RO:0002211 relation]" title="RO:0002211 relation" /> RO:0002211 </span> </td> <td> transcription by RNA polymerase V </td> </tr> <!-- END template: term_details_re_row.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x557a8873ffe0) --> <!-- object_chunk = HASH(0x557a891d5610) --> <!-- even_odd_rows = 3 --> <!-- munge_id_tail = _a --> <!-- count_type = subject --> <tr class=""> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:1904281" title="Go to positive regulation of transcription by RNA polymerase V">positive regulation of transcription by RNA polymerase V (GO:1904281)</a> </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/RO:0002213.gif" alt="[RO:0002213 relation]" title="RO:0002213 relation" /> RO:0002213 </span> </td> <td> transcription by RNA polymerase V </td> </tr> <!-- END template: term_details_re_row.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x557a88740118) --> <!-- object_chunk = HASH(0x557a891d5610) --> <!-- even_odd_rows = 4 --> <!-- munge_id_tail = _a --> <!-- count_type = subject --> <tr class=""> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0001058" title="Go to RNA polymerase V activity">RNA polymerase V activity (GO:0001058)</a> </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/BFO:0000050.gif" alt="[BFO:0000050 relation]" title="BFO:0000050 relation" /> BFO:0000050 </span> </td> <td> transcription by RNA polymerase V </td> </tr> <!-- END template: term_details_re_row.tmpl --> <tbody> </tbody> </table> <!-- END template: term_details_sentences.tmpl --> </div> </div> </div> <div id="display-xref-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_xrefs.tmpl --> <h5>None.</h5> <!-- END template: term_details_xrefs.tmpl --> </div> </div> </div> </div> <!-- END template: term_details.tmpl --> <!-- Begin: footer.tmpl --> <!-- release_date = --> <!-- version = 2.5.17 --> <!-- VERSION = --> <hr> <footer> <div class="row"> <!-- Left. --> <div class="col-md-4"> <a href="https://geneontology.org/page/go-citation-policy#GO_Data" title="How to cite AmiGO data">Cite this data</a> • <a href="http://geneontology.org/page/use-and-license" title="Terms of use for the GO project">Terms of use</a> • <a href="http://help.geneontology.org" title="Contact the GO helpdesk">GO helpdesk</a> <br /> Copyright © 1999-2024 <a href="https://geneontology.org/" title="Gene Ontology home page">the Gene Ontology</a> </div> <!-- Middle. --> <div class="col-md-4" style="text-align: center;"> <!-- <a href="https://wiki.geneontology.org/index.php/AmiGO_Labs" title="Try out an experimental version of AmiGO"><small>Try AmiGO Labs</small></a> --> </div> <!-- Right. --> <div class="col-md-4" style="text-align: right;"> <a href="https://doi.org/10.5281/zenodo.14083199"> <img src="https://zenodo.org/badge/DOI/10.5281/zenodo.14083199.svg" alt="DOI"> </a> <br /> Last file loaded on 2024-11-05, see <a href="https://amigo.geneontology.org/amigo/load_details">full details</a> <br /> AmiGO 2 version: <a title="View release notes for the current version" href="https://wiki.geneontology.org/index.php/AmiGO_2_0">2.5.17</a> (amigo-production) </div> </div> </footer> <!-- analytics --> <!-- Google tag (gtag.js) --> <script async src="https://www.googletagmanager.com/gtag/js?id=G-SW9EH26WXM"></script> <script> window.dataLayer = window.dataLayer || []; function gtag(){dataLayer.push(arguments);} gtag('js', new Date()); gtag('config', 'G-SW9EH26WXM'); </script> <!-- End: footer.tmpl --> <!-- START: content_close.tmpl --> </div> </body> </html> <!-- END: content_close.tmpl -->