CINXE.COM

Editing the Wiki

<!DOCTYPE html> <html> <head> <title>Editing the Wiki</title> <meta charset="utf-8" /> <meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=3" /> <meta content="ImageJ Wiki" property="og:site_name"> <meta content="Editing the Wiki" property="og:title"> <meta content="article" property="og:type"> <meta content="The ImageJ wiki is a community-edited knowledge base on topics relating to ImageJ, a public domain program for processing and analyzing scientific images, and its ecosystem of derivatives and variants, including ImageJ2, Fiji, and others." property="og:description"> <meta content="https://imagej.github.io/editing/index" property="og:url"> <meta content="https://imagej.github.io/media/icons/imagej2.png" property="og:image"> <link rel="apple-touch-icon" sizes="180x180" href="/apple-touch-icon.png"> <link rel="icon" type="image/png" sizes="32x32" href="/favicon-32x32.png"> <link rel="icon" type="image/png" sizes="16x16" href="/favicon-16x16.png"> <link rel="manifest" href="/site.webmanifest"> <link rel="mask-icon" href="/safari-pinned-tab.svg" color="#5bbad5"> <meta name="msapplication-TileColor" content="#da532c"> <meta name="theme-color" content="#ffffff"> <link rel="stylesheet" href="/assets/css/lightbox.min.css" /> <link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/instantsearch.css@7/themes/algolia-min.css"/> <script type="text/javascript" src="https://cdn.jsdelivr.net/npm/dygraphs@2.1.0/dist/dygraph.min.js"></script> <link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/dygraphs@2.1.0/dist/dygraph.min.css" /> <link rel="stylesheet" href="/assets/css/main.css" /> <link rel="stylesheet" href="/assets/css/layout.css"/> <link rel="stylesheet" href="/assets/css/includes.css" /> <link rel="stylesheet" href="/assets/css/dock.css"/> <noscript><link rel="stylesheet" href="/assets/css/noscript.css" /></noscript> <link rel="stylesheet" href="/assets/css/page.css" /> </head> <body class="is-preload"> <!-- Top bar --> <section id="top-bar"> <a href="/"><img id="site-logo" src="/media/icons/imagej2.png"></a> <div id="search-panel"> <div id="search-box"></div> </div> </section> <!-- Page-info --> <div class="page-info"> <a href="https://github.com/imagej/imagej.github.io/commits/main/_pages/editing/index.md">Page history</a> <a href="https://github.com/imagej/imagej.github.io/edit/main/_pages/editing/index.md">Edit this page</a> <a href="/editing">How do I edit this website?</a></div> <section id="left-column" class="sidebar dock"> <!-- Menu --> <div class="menu dockable"> <div class="drag-handle"></div><h3>ImageJ Docs</h3> <ul> <li><a href="/downloads">Download</a></li> <li><details><summary>Learn</summary><ul> <li><details><summary><a href="/learn">ImageJ Basics</a></summary><ul> <li><a href="/tutorials">Tutorials</a></li> <li><a href="/learn/user-guides">User Guides</a></li> <li><a href="/learn/keyboard-shortcuts">Keyboard Shortcuts</a></li> <li><a href="/learn/tips-and-tricks">Tips and Tricks</a></li> <li><a href="/learn/troubleshooting">Troubleshooting</a></li> <li><a href="/learn/faq">Frequently Asked Questions</a></li> <li><details><summary><a href="/platforms">Supported Platforms</a></summary><ul> <li><a href="/platforms/windows">Windows</a></li> <li><a href="/platforms/macos">MacOS</a></li> <li><a href="/platforms/linux">Linux</a></li> <li><a href="/platforms/pi">Raspberry Pi</a></li> <li><a href="/platforms/android">Android</a></li> </ul></details></li> <!-- Learn/ImageJ Basics/Supported Platforms --> <li><details><summary><a href="/formats">File Formats</a></summary><ul> <li><a href="/formats/bio-formats">Bio-Formats</a></li> <li><a href="/formats/video">Video formats</a></li> <li><a href="/formats/quicktime">QuickTime</a></li> <li><a href="/formats/tiff">TIFF</a></li> <li><a href="/formats/pdf">PDF</a></li> <li><a href="/formats/dicom">DICOM</a></li> <li><a href="/formats/lsm">Zeiss LSM</a></li> <li><a href="/formats/olympus">Olympus VSI</a></li> <li><a href="/formats/lurawave">Opera Flex</a></li> <li><a href="/formats/fib-sem">FIB-SEM</a></li> </ul></details></li> <!-- Learn/ImageJ Basics/File Formats --> </ul></details></li> <!-- Learn/ImageJ --> <li><details><summary><a href="/imaging">Scientific Imaging</a></summary><ul> <li><a href="/imaging/principles">Principles of Scientific Imaging</a></li> <li><a href="/imaging/annotating-images">Annotating Images</a></li> <li><a href="/imaging/colocalization-analysis">Colocalization</a></li> <li><a href="/imaging/color-image-processing">Color Image Processing</a></li> <li><a href="/imaging/deconvolution">Deconvolution</a></li> <li><a href="/imaging/image-intensity-processing">Image Intensity Processing</a></li> <li><a href="/imaging/particle-analysis">Particle Analysis</a></li> <li><a href="/imaging/registration">Registration</a></li> <li><a href="/imaging/segmentation">Segmentation</a></li> <li><a href="/imaging/stack-slice-manipulations">Stack-slice Manipulations</a></li> <li><a href="/imaging/t-functions">T-functions</a></li> <li><a href="/imaging/tracking">Tracking</a></li> <li><a href="/imaging/visualization">Visualization</a></li> <li><a href="/imaging/z-functions">Z-functions</a></li> </ul></details></li> <!-- Learn/Scientific Imaging --> </ul></details></li> <!-- Learn --> <li><details><summary><a href="/plugins">Extend</a></summary><ul> <li><a href="/list-of-extensions">List of Extensions</a></li> <li><details><summary><a href="/update-sites">Update Sites</a></summary><ul> <li><a href="/list-of-update-sites">List of Update Sites</a></li> <li><a href="/update-sites/following">Following an Update Site</a></li> <li><a href="/update-sites/setup">Creating an Update Site</a></li> <li><a href="/update-sites/tos">Terms of Service</a></li> <li><a href="/update-sites/automatic-uploads">Automatic Upload</a></li> <li><a href="/update-sites/core-uploads">Uploading to Core Sites</a></li> <li><a href="/update-sites/faq">Update Sites FAQ</a></li> <li><a href="/update-sites/stats">Statistics</a></li> </ul></details></li> <!-- Extend/Update Sites --> <li><details><summary><a href="/scripting">Scripting</a></summary><ul> <li><a href="/scripting/basics">Scripting Basics</a></li> <li><a href="/scripting/script-editor">Script Editor</a></li> <li><a href="/scripting/parameters">Parameters</a></li> <li><a href="/scripting/user-input">User Input</a></li> <li><a href="/scripting/auto-imports">Auto Import</a></li> <li><a href="/scripting/templates">Templates</a></li> <li><a href="/scripting/batch">Batch Processing</a></li> <li><a href="/scripting/headless">Running Headlessly</a></li> <li><a href="/scripting/comparisons">Scripting Comparisons</a></li> <li><a href="/scripting/toolbox">Toolbox</a></li> <li><details><summary>Languages</summary><ul> <li><a href="/scripting/beanshell">BeanShell Scripting</a></li> <li><a href="/scripting/groovy">Groovy Scripting</a></li> <li><a href="/scripting/macro">ImageJ Macro</a></li> <li><a href="/scripting/javascript">JavaScript</a></li> <li><a href="/scripting/clojure">Lisp (Clojure)</a></li> <li><a href="/scripting/matlab">MATLAB</a></li> <li><a href="/scripting/jython">Python (Jython)</a></li> <li><a href="/scripting/python">Python (native)</a></li> <li><a href="/scripting/renjin">R (Renjin)</a></li> <li><a href="/scripting/jruby">Ruby (JRuby)</a></li> <li><a href="/scripting/scala">Scala Scripting</a></li> </ul></details></li> <!-- Extend/Scripting/Languages --> </ul></details></li> <!-- Extend/Scripting --> <li><details><summary><a href="/develop">Development</a></summary><ul> <li><a href="/develop/philosophy">Philosophy</a></li> <li><a href="/develop/architecture">Architecture</a></li> <li><a href="/develop/source">Source code</a></li> <li><a href="/develop/project-management">Project management</a></li> <li><a href="/develop/coding-style">Coding style</a></li> <li><a href="/develop/javadoc">Using Javadoc</a></li> <li><a href="/develop/debugging">Debugging</a></li> <li><a href="/develop/wish-list">Wish list</a></li> <li><details><summary>Tools</summary><ul> <li><a href="/develop/github">GitHub</a></li> <li><a href="/develop/maven">Maven</a></li> <li><a href="/develop/ci">CI/CD</a></li> <li><a href="/develop/dotfiles">Dotfiles</a></li> <li><details><summary><a href="/develop/ides">IDEs</a></summary><ul> <li><a href="/develop/eclipse">Eclipse</a></li> <li><a href="/develop/netbeans">NetBeans</a></li> <li><a href="/develop/intellij">IntelliJ IDEA</a></li> <li><a href="/develop/command-line">Command Line</a></li> </ul></details></li> </ul></details></li> <!-- Extend/Development/Tools --> <li><details><summary>Guides</summary><ul> <li><a href="/develop/plugins">Writing plugins</a></li> <li><a href="/develop/improving-the-code">Contributing to a plugin</a></li> <li><a href="/develop/releasing">Development lifecycle</a></li> <li><a href="/develop/building-a-pom">Building a POM</a></li> <li><a href="/develop/debugging-exercises">Hands-on debugging</a></li> <li><a href="/develop/writing-ops">Adding new ops</a></li> <li><a href="/develop/formats">Adding new formats</a></li> <li><a href="/develop/native-libraries">Using native libraries</a></li> <li><a href="/develop/tips">Tips for developers</a></li> <li><a href="/develop/cpp-tips">Tips for C++ developers</a></li> <li><a href="/develop/ij1-plugins">ImageJ 1.x plugins</a></li> <li><a href="/develop/versioning">Versioning</a></li> <li><a href="/develop/logging">Logging</a></li> <li><a href="/develop/uber-jars">Uber-JARs</a></li> </ul></details></li> <!-- Extend/Development/Guides --> <li><details><summary><a href="/develop/git">Git</a></summary><ul> <li><a href="/develop/git/eclipse">Git in Eclipse (EGit)</a></li> <li><a href="/develop/git/mini-howto">Git mini howto</a></li> <li><a href="/develop/git/workshop">Git workshop</a></li> <li><a href="/develop/git/conflicts">Git conflicts</a></li> <li><a href="/develop/git/topic-branches">Git topic branches</a></li> <li><a href="/develop/git/notes">Git notes</a></li> <li><a href="/develop/git/reflogs">Git reflogs</a></li> <li><a href="/develop/git/submodules">Git submodules</a></li> <li><a href="/develop/git/pinpoint-regressions">How to pinpoint regressions</a></li> <li><a href="/develop/git/publish-a-repository">How to publish a git repository</a></li> <li><a href="/develop/git/extract-a-subproject">How to extract a subproject</a></li> </ul></details></li> <!-- Extend/Development/Git --> </ul></details></li> <!-- Extend/Development --> </ul></details></li> <!-- Extend --> <li><details open><summary><a href="/contribute">Contribute</a></summary><ul> <li><a href="/contribute/citing">Citing</a></li> <li><a href="/people">Contributors</a></li> <li><a href="/orgs">Organizations</a></li> <li><a href="/contribute/governance">Governance</a></li> <li><a href="/contribute/funding">Funding</a></li> <li><a href="/contribute/fiji">Contributing to Fiji</a></li> <li><details><summary><a href="/licensing">Licensing</a></summary><ul> <li><details><summary><a href="/licensing/open-source">Open Source</a></summary><ul> <li><a href="/licensing/apache">Apache</a></li> <li><a href="/licensing/bsd">BSD</a></li> <li><a href="/licensing/epl">EPL</a></li> <li><a href="/licensing/gpl">GPL</a></li> <li><a href="/licensing/lgpl">LGPL</a></li> <li><a href="/licensing/mit">MIT</a></li> <li><a href="/licensing/public-domain">Public domain</a></li> <li><a href="/licensing/big">BIG</a></li> </ul></details></li> <!-- Contribute/Licensing/Open Source --> <li><a href="/licensing/closed-source">Proprietary</a></li> </ul></details></li> <!-- Contribute/Licensing --> <li><details open><summary><a class="current-page">Editing the Wiki</a></summary><ul> <li><a href="/editing/advanced">Advanced Editing</a></li> <li><a href="/editing/buttons">Buttons</a></li> <li><a href="/editing/citations">Citations</a></li> <li><a href="/editing/code">Source Code</a></li> <li><a href="/editing/debugging">Debugging</a></li> <li><a href="/editing/headers">Headers</a></li> <li><a href="/editing/icons">Icons</a></li> <li><a href="/editing/images">Images</a></li> <li><a href="/editing/keys">Keyboard Shortcuts</a></li> <li><a href="/editing/linking">Linking</a></li> <li><a href="/editing/math">Math Expressions</a></li> <li><a href="/editing/menu-paths">Menu Paths</a></li> <li><a href="/editing/navigation">Navigation</a></li> <li><a href="/editing/notices">Notices</a></li> <li><a href="/editing/people">People</a></li> <li><a href="/editing/pitfalls">Pitfalls</a></li> <li><a href="/editing/quizzes">Quizzes</a></li> <li><a href="/editing/statbox">Statbox</a></li> <li><a href="/editing/symbols">Symbols</a></li> <li><a href="/editing/tables">Tables</a></li> <li><a href="/editing/tooltips">Tooltips</a></li> <li><a href="/editing/videos">Videos</a></li> <li><a href="/editing/whitespace">Whitespace</a></li> </ul></details></li> <!-- Contribute/Editing the Wiki --> </ul></details></li> <!-- Contribute --> <li><details><summary><a href="/discuss">Discuss</a></summary><ul> <li><a href="/discuss/bugs">Reporting Issues</a></li> <li><a href="/discuss/mailing-lists">Mailing Lists</a></li> <li><a href="/discuss/chat">Chat</a></li> </ul></details></li> <!-- Discuss --> <li><details><summary>Explore</summary><ul> <li><a href="/news">News</a></li> <li><details><summary><a href="/events">Events</a></summary><ul> <li><a href="/events/presentations">Presentations</a></li> <li><a href="/events/conferences">Conferences</a></li> <li><a href="/events/hackathons">Hackathons</a></li> <li><a href="/events">More...</a></li> </ul></details></li> <!-- Discuss/Events --> <li><details><summary><a href="/libs">Libraries</a></summary><ul> <li><a href="/libs/imagej-ops">ImageJ Ops</a></li> <li><a href="/libs/imagej-common">ImageJ Common</a></li> <li><a href="/libs/imagej-legacy">ImageJ Legacy</a></li> <li><a href="/libs/scijava">SciJava</a></li> <li><a href="/libs/scifio">SCIFIO</a></li> <li><details><summary><a href="/libs/imglib2">ImgLib2</a></summary><ul> <li><a href="/libs/imglib2/getting-started">Getting Started</a></li> <li><a href="/libs/imglib2/accessors">Accessors</a></li> <li><a href="/libs/imglib2/accessibles">Accessibles</a></li> <li><a href="/libs/imglib2/examples">Examples</a></li> <li><a href="/libs/imglib2/workshop-introductory">Introductory Workshop</a></li> <li><a href="/libs/imglib2/workshop-advanced">Advanced Workshop</a></li> <li><a href="/libs/imglib2/matlab">ImgLib2 images in MATLAB</a></li> <li><a href="/libs/imglib2/benchmarks">Benchmarks</a></li> <li><a href="/libs/imglib2/faq">FAQ</a></li> <li><a href="/libs/imglib2/developing">Developing ImgLib2</a></li> <li><a href="/libs/imglib2/discussion">ImgLib2 Discussion</a></li> </ul></details></li> <!-- Explore/Libraries/ImgLib2 --> <li><a href="/libs">More...</a></li> </ul></details></li> <!-- Explore/Libraries --> <li><details><summary><a href="/software">Software</a></summary><ul> <li><a href="/software/nih-image">NIH Image</a></li> <li><a href="/software/imagej">ImageJ</a></li> <li><a href="/software/imagej2">ImageJ2</a></li> <li><a href="/software/fiji">Fiji</a></li> <li><a href="/software">More...</a></li> </ul></details></li> <!-- Explore/Software --> </ul></details></li> <!-- Explore --> </ul> </div> </section> <section id="right-column" class="sidebar dock"> <!-- Vital stats --> <!-- Table of contents --> <div id="toc" class="toc menu dockable"> <div class="drag-handle"></div> <h3>Page contents</h3> <ul data-toc="#content" data-toc-headings="h1,h2,h3,h4,h5,h6"></ul> </div> </section> <!-- Page title --> <div class="container"> <header class="major special"> <h1>Editing the Wiki</h1> </header> </div> <!-- Nav bar --> <div id="nav-bar"><ul class="shadowed-box"><li>Introduction</li><li><a href="/editing/advanced">Advanced&nbsp;Editing</a></li><li><a href="/editing/buttons">Buttons</a></li><li><a href="/editing/citations">Citations</a></li><li><a href="/editing/code">Source&nbsp;Code</a></li><li><a href="/editing/debugging">Debugging</a></li><li><a href="/editing/dokuwiki-migration">DokuWiki&nbsp;Migration</a></li><li><a href="/editing/headers">Headers</a></li><li><a href="/editing/icons">Icons</a></li><li><a href="/editing/images">Images</a></li><li><a href="/editing/keys">Keyboard&nbsp;Shortcuts</a></li><li><a href="/editing/linking">Linking</a></li><li><a href="/editing/math">Math&nbsp;Expressions</a></li><li><a href="/editing/menu-paths">Menu&nbsp;Paths</a></li><li><a href="/editing/navigation">Navigation</a></li><li><a href="/editing/notices">Notices</a></li><li><a href="/editing/people">People</a></li><li><a href="/editing/pitfalls">Pitfalls</a></li><li><a href="/editing/quizzes">Quizzes</a></li><li><a href="/editing/statbox">Statbox</a></li><li><a href="/editing/symbols">Symbols</a></li><li><a href="/editing/tables">Tables</a></li><li><a href="/editing/tooltips">Tooltips</a></li><li><a href="/editing/videos">Videos</a></li><li><a href="/editing/whitespace">Whitespace</a></li></ul></div> <!-- Main content --> <section id="page" class="main style1"> <div class="container"> <div class="box alt"></div> <div id="content" class="page-content"> <p>This page explains how to write and edit wiki pages. The simplest way to create or modify a page is using GitHub’s online file editor. Each page has an “Edit page” link at the top right with a direct link to this interface.</p> <div class="notice" style="font-size: 2; background: #e6e6e6; border-left: 10px solid #bdbdbd"><div class="notice-icon"><img src="/media/icons/tech.png" /></div><div class="notice-content"><p>Advanced users can make edits via a local clone of the site repository; see the <a href="/editing/advanced">advanced editing guide</a> for setup instructions.</p> </div> </div> <h1 id="requirements">Requirements</h1> <p>As this wiki is completely hosted on GitHub, you will need to be logged into a GitHub account to make edits (this replaces the old system of registering for an ImageJ-wiki-specific account). If you don’t have an account yet, you can <a href="https://github.com/signup">create one freely</a>.</p> <p>When making edits through the GitHub web UI, first-time contributors will likely be prompted to <a href="#why-do-i-need-to-fork-this-repository-to-edit-it">fork this repository</a>. Make your edits to your fork as described below, and then <a href="https://docs.github.com/en/pull-requests/collaborating-with-pull-requests/proposing-changes-to-your-work-with-pull-requests/creating-a-pull-request-from-a-fork">create a pull request</a>.</p> <p>An admin will review your pull request, merge it, and add you as a collaborator. Any future edits can then be made directly to this wiki. You can delete your fork at that point.</p> <p>You can also manually create <a href="https://docs.github.com/en/get-started/quickstart/fork-a-repo">forks</a> at any time, and are welcome to continue using the Pull Request mechanism if you prefer.</p> <h1 id="creating-a-new-page">Creating a new page</h1> <p>Let’s dive in to how to create a new page on the site. If you are looking to edit an existing page, skip to <a href="#adding-editing-page-content">adding and editing page content</a> below. See also the general GitHub <a href="https://docs.github.com/en/repositories/working-with-files/managing-files/editing-files">guide to editing files</a>.</p> <ol> <li> <p>Navigate to an appropriate sub-directory of the <a href="https://github.com/imagej/imagej.github.io/tree/-/_pages">pages section</a> of the repository. For example, if you are creating a page about a plugin, you would go to <a href="https://github.com/imagej/imagej.github.io/tree/-/_pages">_pages/plugins/</a>. <strong>Note:</strong> if you need to create a new sub-directory, it can be specified in the file name below.</p> </li> <li> <p>Click <span class="app-button">Add file</span> then <span class="app-button">Create new file</span> from the drop-down:</p> <p><img src="/media/editing/create-page-etw.png" class="img center" alt="editing/create-page-etw" /></p> </li> <li> <p>Add a name for your file. <strong>Note: this is not the page title;</strong> the page title will be applied in the next section, front matter. File names should be:</p> <ul> <li>all lower case</li> <li>use the file extension <code class="language-plaintext highlighter-rouge">.md</code></li> <li>optionally prefixed with new sub-directory name(s), separated with <code class="language-plaintext highlighter-rouge">/</code></li> <li>avoid symbols and spaces, and separate words using dashes (<code class="language-plaintext highlighter-rouge">-</code>):</li> </ul> <p><img src="/media/editing/name-your-file.png" class="img center" alt="editing/name-your-file" style="border: 1px solid #aaa" /></p> </li> </ol> <h2 id="front-matter">Front matter</h2> <p>Every page begins with a block of <em>front matter</em>: a sequence of parameters that configure your page. Without the front matter, your page will not render correctly. The following table lists front matter fields you can use:</p> <table> <thead> <tr> <th style="text-align: right"><strong>Field</strong></th> <th style="text-align: left"><strong>Purpose</strong></th> </tr> </thead> <tbody> <tr> <td style="text-align: right"><strong>title</strong></td> <td style="text-align: left">The title of your page. (<strong>Required</strong>)</td> </tr> <tr> <td style="text-align: right"><strong>description</strong></td> <td style="text-align: left">A short description of your page. Also used for the site’s search engine. When omitted, the first sentence of the page content is used.</td> </tr> <tr> <td style="text-align: right"><strong>section</strong></td> <td style="text-align: left">Main menu section that should be open when this page first loads, if any. Nested sections to expand should be separated by colons (<code class="language-plaintext highlighter-rouge">:</code>). For example, this page’s section is <code class="language-plaintext highlighter-rouge">Contribute:Editing the Wiki</code>.</td> </tr> <tr> <td style="text-align: right"><strong>categories</strong></td> <td style="text-align: left">For pages describing extensions (e.g. a plugin, script, or update site) of ImageJ: a comma-separated list of categories, enclosed in square brackets (<code class="language-plaintext highlighter-rouge">[</code> and <code class="language-plaintext highlighter-rouge">]</code>). Pages with categories appear in the <a href="/list-of-extensions">List of extensions</a>. For example, <code class="language-plaintext highlighter-rouge">[Segmentation, Registration]</code> would put your page in the Segmentation and Registration categories.</td> </tr> <tr> <td style="text-align: right"><strong>statbox*</strong></td> <td style="text-align: left">A collection of individual fields that are used to populate the “Vital statistics” sidebar; see <a href="https://github.com/imagej/imagej.github.io/blob/-/_includes/layout/statbox#L30-L85">this comment</a> for a list. Including at least one of these fields will cause the statbox to appear; otherwise, there will be no statbox for the page.<br /> (<em><strong>*</strong>note there is no field called “statbox”</em>)</td> </tr> <tr> <td style="text-align: right"><strong>icon</strong></td> <td style="text-align: left">A link (internal or external) to an icon that will be used for the page across the wiki, e.g. in the <a href="/list-of-extensions">list of extensions</a> or search bar results.</td> </tr> <tr> <td style="text-align: right"><strong>project</strong></td> <td style="text-align: left">Used to identify project affiliation. See the list of <a href="https://github.com/imagej/imagej.github.io/blob/master/_config.yml#L15-L33">available projects</a></td> </tr> <tr> <td style="text-align: right"><strong>nav-links</strong></td> <td style="text-align: left">Adds a top navigation bar for related pages. See the <a href="/editing/navigation#nav-links">Navigation</a> guide for examples.</td> </tr> </tbody> </table> <p>Below is a minimal example front matter block. You can copy and paste this code into the editor of a new page (see above).</p> <p>Replace <code class="language-plaintext highlighter-rouge">My Awesome Page</code> with the title for the new page.</p> <div class="language-plaintext highlighter-rouge"><div class="highlight"><pre class="highlight"><code>--- title: My Awesome Page --- </code></pre></div></div> <h1 id="adding-editing-page-content">Adding + editing page content</h1> <p>This section covers how to populate the <em>content</em> of your page.</p> <h2 id="markdown">Markdown</h2> <p><a href="https://en.wikipedia.org/wiki/Markdown">Markdown</a> is plain-text syntax formatting, allowing you to easily and cleanly modify text with italics, bold, ordered or bulleted lists, etc. This wiki, as a Jekyll site, uses <a href="https://kramdown.gettalong.org/syntax.html">kramdown</a>. A quick-reference can be found <a href="https://kramdown.gettalong.org/quickref.html">here</a>, and a general Jekyll support reference <a href="https://www.markdownguide.org/tools/jekyll/">here</a>. Also helpful is GitHub Flavored Markdown (GFM) guide found <a href="https://guides.github.com/features/mastering-markdown/">here</a>.</p> <p>Here are some common kinds of text formatting:</p> <table> <thead> <tr> <th>Formatting</th> <th>Markup</th> </tr> </thead> <tbody> <tr> <td><em>italic text</em></td> <td><code class="language-plaintext highlighter-rouge">*italic text*</code></td> </tr> <tr> <td><strong>bold text</strong></td> <td><code class="language-plaintext highlighter-rouge">**bold text**</code></td> </tr> <tr> <td><strong><em>bold and italic text</em></strong></td> <td><code class="language-plaintext highlighter-rouge">***bold and italic text***</code></td> </tr> <tr> <td><code class="language-plaintext highlighter-rouge">fixed width text/code</code></td> <td><code>`fixed width text/code`</code></td> </tr> <tr> <td><del>struck-out text</del></td> <td><code class="language-plaintext highlighter-rouge">~~struck-out text~~</code></td> </tr> <tr> <td><a href="https://example.com/">Hyperlink</a></td> <td><code class="language-plaintext highlighter-rouge">[Hyperlink](https://example.com/)</code></td> </tr> <tr> <td><span style="color: red">red text</span></td> <td><code class="language-plaintext highlighter-rouge">&lt;span style="color: red"&gt;red text&lt;/span&gt;</code></td> </tr> </tbody> </table> <p>Note that the last example, colored text, is not really Markdown, but rather plain <a href="https://en.wikipedia.org/wiki/HTML">HTML</a>. However, Markdown does not have a syntax for changing text color, and it supports mixing in HTML, so you can use the technique above if you need text in different colors.</p> <p>Here are some common image uses:</p> <table> <thead> <tr> <th>Image</th> <th>Markup</th> </tr> </thead> <tbody> <tr> <td><img src="/media/icons/fiji.svg" alt="Alt text" /></td> <td><code class="language-plaintext highlighter-rouge">![Alt text](/media/icons/fiji.svg)</code></td> </tr> <tr> <td><img src="https://fiji.sc/site/logo.png" alt="External image" width="64px" /></td> <td><code class="language-plaintext highlighter-rouge">![External image](https://fiji.sc/site/logo.png){:width="64px"}</code></td> </tr> </tbody> </table> <p>Note that the last example includes inline styling, which is kramdown-specific.</p> <p>Certain kinds of structures have dedicated pages of this guide:</p> <ul> <li><a href="images">Images</a> (using <a href="#liquid">Liquid</a>, not Markdown, for more complex image needs such as galleries, figures, etc…)</li> <li><a href="tables">Tables</a></li> <li><a href="math">Math expressions</a></li> <li><a href="code">Source code and syntax highlighting</a></li> <li><a href="citations#footnotes">Footnotes</a></li> </ul> <h2 id="liquid">Liquid</h2> <p>On top of Markdown, the site uses a templating language called <a href="https://jekyllrb.com/docs/liquid/">Liquid</a> to make page editing more convenient than with Markdown alone. Liquid tags look like <code class="language-plaintext highlighter-rouge">{% ... %}</code> or <code class="language-plaintext highlighter-rouge">{{ ... }}</code>. Many pages on this site use Liquid to invoke functions called <em>includes</em>, which enable insertion of images, figures, notices, and more. (Think of this as: “I would like to <em>include</em> an image”.) Here are a couple of examples:</p> <style> .skinny { margin-left: 0; max-width: 30em; } .skinny td:first-child { width: 8em; } </style> <table style="margin-left: 0; max-width: 30em"> <thead> <tr> <th>Markup</th> <th>Result</th> </tr> </thead> <tbody> <tr> <td><code class="language-plaintext highlighter-rouge">{% include icon name="imagej" %}</code></td> <td><a href=""><img alt="imagej" src="/media/icons/imagej.png" width="48px" /></a></td> </tr> <tr> <td><code class="language-plaintext highlighter-rouge">{% include person id="rasband" %}</code></td> <td><a class="person" href="/people/rasband">Wayne Rasband</a></td> </tr> </tbody> </table> <h3 id="available-includes">Available includes</h3> <p>The following tables list all of this site’s general-purpose includes:</p> <h4 id="citations-and-footnotes">Citations and footnotes</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="citations#citing-publications">citation</a></td> <td>Insert a citation</td> </tr> <tr> <td><a href="citations#testimonials">testimonial</a></td> <td>Insert a personal quote</td> </tr> </tbody> </table> <h4 id="linking">Linking</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="linking#banner">link-banner</a></td> <td>Insert a large, obvious link</td> </tr> <tr> <td><a href="linking#github">github</a></td> <td>Link to a resource on GitHub</td> </tr> <tr> <td><a href="linking#javadoc">javadoc</a></td> <td>Link to a javadoc resource</td> </tr> <tr> <td><a href="linking#matlab">matlab</a></td> <td>Link to MATLAB documentation</td> </tr> <tr> <td><a href="linking#maven">maven</a></td> <td>Link to Maven artifacts</td> </tr> <tr> <td><a href="people">person</a></td> <td>Link to a person’s user page</td> </tr> <tr> <td><a href="people#lists">person-list</a></td> <td>Link to a list of user pages</td> </tr> <tr> <td><a href="linking#scholar">scholar</a></td> <td>Link to an article on Google Scholar</td> </tr> <tr> <td><a href="linking#wikipedia">wikipedia</a></td> <td>Link to a Wikipedia page</td> </tr> </tbody> </table> <h4 id="symbols">Symbols</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="menu-paths">bc</a></td> <td>Insert a menu breadcrumb</td> </tr> <tr> <td><a href="buttons">button</a></td> <td>Insert a button</td> </tr> <tr> <td><a href="keys">key</a></td> <td>Insert a keyboard shortcut</td> </tr> <tr> <td><a href="icons">icon</a></td> <td>Insert an icon</td> </tr> </tbody> </table> <h4 id="media">Media</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="images#images">img</a></td> <td>Insert an image</td> </tr> <tr> <td><a href="images#image-galleries">gallery</a></td> <td>Insert an image gallery</td> </tr> <tr> <td><a href="videos">video</a></td> <td>Embed a video</td> </tr> <tr> <td><a href="tables#spreadsheets">spreadsheet</a></td> <td>Embed a spreadsheet</td> </tr> </tbody> </table> <h4 id="notices">Notices</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="notices">notice</a></td> <td>Insert an informational notice banner</td> </tr> <tr> <td><a href="notices#asides">aside</a></td> <td>Float a right sidebar with commentary</td> </tr> </tbody> </table> <h4 id="source-code">Source code</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="code">code</a></td> <td>Embed a code snippet from GitHub</td> </tr> </tbody> </table> <h4 id="miscellaneous">Miscellaneous</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>Purpose</th> </tr> </thead> <tbody> <tr> <td><a href="quizzes">quiz</a></td> <td>Insert a Q&amp;A with hidden answer</td> </tr> <tr> <td><a href="timelines">timeline</a></td> <td>Insert a horizontal timeline</td> </tr> <tr> <td><a href="tooltips">tooltip</a></td> <td>Add a tooltip appearing on mouseover</td> </tr> <tr> <td><a href="debugging">echo</a></td> <td>For debugging</td> </tr> </tbody> </table> <h4 id="marked-for-removal">MARKED FOR REMOVAL</h4> <table class="skinny"> <thead> <tr> <th>Include</th> <th>What needs to happen</th> </tr> </thead> <tbody> <tr> <td>thumbnail</td> <td>Merge with img include</td> </tr> <tr> <td><a href="notices#info-box">info-box</a></td> <td>Delete after migrating to statbox</td> </tr> <tr> <td>clear</td> <td>Delete after purging all floats</td> </tr> </tbody> </table> <h1 id="finalizing-your-edits">Finalizing your edits</h1> <p>Once you’re happy with your new page, click on the “Commit changes” button to save your work:</p> <p><img src="/media/editing/committing-changes.png" class="img center" alt="editing/committing-changes" style="border: 1px solid #aaa" /></p> <p>This will bring up a dialog where you can set the summary commit message, a more in-depth description of the changes, and verify the account used to make the changes.</p> <p><img src="/media/editing/commit-dialog.png" class="img center" alt="editing/commit-dialog" style="border: 1px solid #aaa" /></p> <p>For most edits it makes sense to simply commit to the <code class="language-plaintext highlighter-rouge">main</code> branch directly. Just adding pages won’t break anything. But if you are concerned you can always use the “branch and pull request” option. Just make sure to assign or mention someone in the PR (pull request)! Otherwise we may not see it to merge it in a timely manner. Good options for reviewer are <a class="person" href="/people/hinerm">Mark Hiner</a> and <a class="person" href="/people/ctrueden">Curtis Rueden</a>.</p> <p>If you aren’t sure what to write in your commit message, there are many guides out on the internet. You can even ask ChatGPT! Just don’t do this:</p> <p><img src="https://imgs.xkcd.com/comics/git_commit.png" class="img center" alt="https://imgs.xkcd.com/comics/git_commit.png" style="border: 1px solid #aaa" /></p> <p>Once you are sufficiently happy with your message and click the “Commit changes” button, your edits will go onto the history of the site. This will trigger <a href="https://github.com/imagej/imagej.github.io/actions">a rebuild of the site</a>. Once that completes, your changes will show up on the live site! Thank you for your contribution!</p> <h1 id="adding-non-page-files">Adding non-page files</h1> <p>If you need to add other types of files, you can use the “Upload files” option in the “Add files” button:</p> <p><img src="/media/editing/uploading-files.png" class="img center" alt="editing/uploading-files" style="border: 1px solid #aaa" /></p> <p>This will bring you to a drag-and-drop interface that allows you to create a new commit directly after you’ve uploaded your desired files.</p> <p>If you want more control over the structure of the files you’re adding, it may be easier to go the <a href="/editing/advanced">Advanced Editing</a> route. This also allows you to preview your changes before committing them.</p> <h1 id="faq">FAQ</h1> <h2 id="why-do-i-need-to-fork-this-repository-to-edit-it">Why do I need to fork this repository to edit it?</h2> <p>If you go to edit a page and see this message, it means you are not listed as a <a href="https://github.com/imagej/imagej.github.io/settings/access">collaborator</a> in this repository.</p> <p><img src="/media/editing/forking.png" class="img center" alt="editing/forking" style="border: 1px solid #aaa" /></p> <p>Proceed with the forking as indicated (which creates a copy of the repository under your account, so that you can edit it). Make the edits you’d like to your fork, then submit a pull request. Upon completion of the pull request review you will be made a collaborator and can make future edits directly.</p> </div> </div> </section> <!-- Footer --> <section id="footer"> <ul class="icons"> <li><a href="https://forum.image.sc/tag/imagej" class="icon alt"><img src="/media/icons/image-sc.png" width="24" style="vertical-align: middle; margin-top: -10px"><span class="label">Forum</span></a></li> <li><a href="https://twitter.com/hashtag/ImageJ" class="icon brands alt fa-twitter"><span class="label">Twitter</span></a></li> <li><a href="https://github.com/imagej" class="icon brands alt fa-github"><span class="label">GitHub</span></a></li> </ul> <ul class="copyright"> <li>Design: <a href="http://html5up.net">HTML5 UP</a></li> </ul> </section> <!-- Hamburger menu --> <nav role="navigation"> <div id="ham-toggle"> <input type="checkbox" /> <span></span> <!-- top bun --> <span></span> <!-- hamburger --> <span></span> <!-- bottom bun --> <ul id="ham-menu"> <div class="menu"><h3>ImageJ Docs</h3> <ul> <li><a href="/downloads">Download</a></li> <li><details><summary>Learn</summary><ul> <li><details><summary><a href="/learn">ImageJ Basics</a></summary><ul> <li><a href="/tutorials">Tutorials</a></li> <li><a href="/learn/user-guides">User Guides</a></li> <li><a href="/learn/keyboard-shortcuts">Keyboard Shortcuts</a></li> <li><a href="/learn/tips-and-tricks">Tips and Tricks</a></li> <li><a href="/learn/troubleshooting">Troubleshooting</a></li> <li><a href="/learn/faq">Frequently Asked Questions</a></li> <li><details><summary><a href="/platforms">Supported Platforms</a></summary><ul> <li><a href="/platforms/windows">Windows</a></li> <li><a href="/platforms/macos">MacOS</a></li> <li><a href="/platforms/linux">Linux</a></li> <li><a href="/platforms/pi">Raspberry Pi</a></li> <li><a href="/platforms/android">Android</a></li> </ul></details></li> <!-- Learn/ImageJ Basics/Supported Platforms --> <li><details><summary><a href="/formats">File Formats</a></summary><ul> <li><a href="/formats/bio-formats">Bio-Formats</a></li> <li><a href="/formats/video">Video formats</a></li> <li><a href="/formats/quicktime">QuickTime</a></li> <li><a href="/formats/tiff">TIFF</a></li> <li><a href="/formats/pdf">PDF</a></li> <li><a href="/formats/dicom">DICOM</a></li> <li><a href="/formats/lsm">Zeiss LSM</a></li> <li><a href="/formats/olympus">Olympus VSI</a></li> <li><a href="/formats/lurawave">Opera Flex</a></li> <li><a href="/formats/fib-sem">FIB-SEM</a></li> </ul></details></li> <!-- Learn/ImageJ Basics/File Formats --> </ul></details></li> <!-- Learn/ImageJ --> <li><details><summary><a href="/imaging">Scientific Imaging</a></summary><ul> <li><a href="/imaging/principles">Principles of Scientific Imaging</a></li> <li><a href="/imaging/annotating-images">Annotating Images</a></li> <li><a href="/imaging/colocalization-analysis">Colocalization</a></li> <li><a href="/imaging/color-image-processing">Color Image Processing</a></li> <li><a href="/imaging/deconvolution">Deconvolution</a></li> <li><a href="/imaging/image-intensity-processing">Image Intensity Processing</a></li> <li><a href="/imaging/particle-analysis">Particle Analysis</a></li> <li><a href="/imaging/registration">Registration</a></li> <li><a href="/imaging/segmentation">Segmentation</a></li> <li><a href="/imaging/stack-slice-manipulations">Stack-slice Manipulations</a></li> <li><a href="/imaging/t-functions">T-functions</a></li> <li><a href="/imaging/tracking">Tracking</a></li> <li><a href="/imaging/visualization">Visualization</a></li> <li><a href="/imaging/z-functions">Z-functions</a></li> </ul></details></li> <!-- Learn/Scientific Imaging --> </ul></details></li> <!-- Learn --> <li><details><summary><a href="/plugins">Extend</a></summary><ul> <li><a href="/list-of-extensions">List of Extensions</a></li> <li><details><summary><a href="/update-sites">Update Sites</a></summary><ul> <li><a href="/list-of-update-sites">List of Update Sites</a></li> <li><a href="/update-sites/following">Following an Update Site</a></li> <li><a href="/update-sites/setup">Creating an Update Site</a></li> <li><a href="/update-sites/tos">Terms of Service</a></li> <li><a href="/update-sites/automatic-uploads">Automatic Upload</a></li> <li><a href="/update-sites/core-uploads">Uploading to Core Sites</a></li> <li><a href="/update-sites/faq">Update Sites FAQ</a></li> <li><a href="/update-sites/stats">Statistics</a></li> </ul></details></li> <!-- Extend/Update Sites --> <li><details><summary><a href="/scripting">Scripting</a></summary><ul> <li><a href="/scripting/basics">Scripting Basics</a></li> <li><a href="/scripting/script-editor">Script Editor</a></li> <li><a href="/scripting/parameters">Parameters</a></li> <li><a href="/scripting/user-input">User Input</a></li> <li><a href="/scripting/auto-imports">Auto Import</a></li> <li><a href="/scripting/templates">Templates</a></li> <li><a href="/scripting/batch">Batch Processing</a></li> <li><a href="/scripting/headless">Running Headlessly</a></li> <li><a href="/scripting/comparisons">Scripting Comparisons</a></li> <li><a href="/scripting/toolbox">Toolbox</a></li> <li><details><summary>Languages</summary><ul> <li><a href="/scripting/beanshell">BeanShell Scripting</a></li> <li><a href="/scripting/groovy">Groovy Scripting</a></li> <li><a href="/scripting/macro">ImageJ Macro</a></li> <li><a href="/scripting/javascript">JavaScript</a></li> <li><a href="/scripting/clojure">Lisp (Clojure)</a></li> <li><a href="/scripting/matlab">MATLAB</a></li> <li><a href="/scripting/jython">Python (Jython)</a></li> <li><a href="/scripting/python">Python (native)</a></li> <li><a href="/scripting/renjin">R (Renjin)</a></li> <li><a href="/scripting/jruby">Ruby (JRuby)</a></li> <li><a href="/scripting/scala">Scala Scripting</a></li> </ul></details></li> <!-- Extend/Scripting/Languages --> </ul></details></li> <!-- Extend/Scripting --> <li><details><summary><a href="/develop">Development</a></summary><ul> <li><a href="/develop/philosophy">Philosophy</a></li> <li><a href="/develop/architecture">Architecture</a></li> <li><a href="/develop/source">Source code</a></li> <li><a href="/develop/project-management">Project management</a></li> <li><a href="/develop/coding-style">Coding style</a></li> <li><a href="/develop/javadoc">Using Javadoc</a></li> <li><a href="/develop/debugging">Debugging</a></li> <li><a href="/develop/wish-list">Wish list</a></li> <li><details><summary>Tools</summary><ul> <li><a href="/develop/github">GitHub</a></li> <li><a href="/develop/maven">Maven</a></li> <li><a href="/develop/ci">CI/CD</a></li> <li><a href="/develop/dotfiles">Dotfiles</a></li> <li><details><summary><a href="/develop/ides">IDEs</a></summary><ul> <li><a href="/develop/eclipse">Eclipse</a></li> <li><a href="/develop/netbeans">NetBeans</a></li> <li><a href="/develop/intellij">IntelliJ IDEA</a></li> <li><a href="/develop/command-line">Command Line</a></li> </ul></details></li> </ul></details></li> <!-- Extend/Development/Tools --> <li><details><summary>Guides</summary><ul> <li><a href="/develop/plugins">Writing plugins</a></li> <li><a href="/develop/improving-the-code">Contributing to a plugin</a></li> <li><a href="/develop/releasing">Development lifecycle</a></li> <li><a href="/develop/building-a-pom">Building a POM</a></li> <li><a href="/develop/debugging-exercises">Hands-on debugging</a></li> <li><a href="/develop/writing-ops">Adding new ops</a></li> <li><a href="/develop/formats">Adding new formats</a></li> <li><a href="/develop/native-libraries">Using native libraries</a></li> <li><a href="/develop/tips">Tips for developers</a></li> <li><a href="/develop/cpp-tips">Tips for C++ developers</a></li> <li><a href="/develop/ij1-plugins">ImageJ 1.x plugins</a></li> <li><a href="/develop/versioning">Versioning</a></li> <li><a href="/develop/logging">Logging</a></li> <li><a href="/develop/uber-jars">Uber-JARs</a></li> </ul></details></li> <!-- Extend/Development/Guides --> <li><details><summary><a href="/develop/git">Git</a></summary><ul> <li><a href="/develop/git/eclipse">Git in Eclipse (EGit)</a></li> <li><a href="/develop/git/mini-howto">Git mini howto</a></li> <li><a href="/develop/git/workshop">Git workshop</a></li> <li><a href="/develop/git/conflicts">Git conflicts</a></li> <li><a href="/develop/git/topic-branches">Git topic branches</a></li> <li><a href="/develop/git/notes">Git notes</a></li> <li><a href="/develop/git/reflogs">Git reflogs</a></li> <li><a href="/develop/git/submodules">Git submodules</a></li> <li><a href="/develop/git/pinpoint-regressions">How to pinpoint regressions</a></li> <li><a href="/develop/git/publish-a-repository">How to publish a git repository</a></li> <li><a href="/develop/git/extract-a-subproject">How to extract a subproject</a></li> </ul></details></li> <!-- Extend/Development/Git --> </ul></details></li> <!-- Extend/Development --> </ul></details></li> <!-- Extend --> <li><details open><summary><a href="/contribute">Contribute</a></summary><ul> <li><a href="/contribute/citing">Citing</a></li> <li><a href="/people">Contributors</a></li> <li><a href="/orgs">Organizations</a></li> <li><a href="/contribute/governance">Governance</a></li> <li><a href="/contribute/funding">Funding</a></li> <li><a href="/contribute/fiji">Contributing to Fiji</a></li> <li><details><summary><a href="/licensing">Licensing</a></summary><ul> <li><details><summary><a href="/licensing/open-source">Open Source</a></summary><ul> <li><a href="/licensing/apache">Apache</a></li> <li><a href="/licensing/bsd">BSD</a></li> <li><a href="/licensing/epl">EPL</a></li> <li><a href="/licensing/gpl">GPL</a></li> <li><a href="/licensing/lgpl">LGPL</a></li> <li><a href="/licensing/mit">MIT</a></li> <li><a href="/licensing/public-domain">Public domain</a></li> <li><a href="/licensing/big">BIG</a></li> </ul></details></li> <!-- Contribute/Licensing/Open Source --> <li><a href="/licensing/closed-source">Proprietary</a></li> </ul></details></li> <!-- Contribute/Licensing --> <li><details open><summary><a class="current-page">Editing the Wiki</a></summary><ul> <li><a href="/editing/advanced">Advanced Editing</a></li> <li><a href="/editing/buttons">Buttons</a></li> <li><a href="/editing/citations">Citations</a></li> <li><a href="/editing/code">Source Code</a></li> <li><a href="/editing/debugging">Debugging</a></li> <li><a href="/editing/headers">Headers</a></li> <li><a href="/editing/icons">Icons</a></li> <li><a href="/editing/images">Images</a></li> <li><a href="/editing/keys">Keyboard Shortcuts</a></li> <li><a href="/editing/linking">Linking</a></li> <li><a href="/editing/math">Math Expressions</a></li> <li><a href="/editing/menu-paths">Menu Paths</a></li> <li><a href="/editing/navigation">Navigation</a></li> <li><a href="/editing/notices">Notices</a></li> <li><a href="/editing/people">People</a></li> <li><a href="/editing/pitfalls">Pitfalls</a></li> <li><a href="/editing/quizzes">Quizzes</a></li> <li><a href="/editing/statbox">Statbox</a></li> <li><a href="/editing/symbols">Symbols</a></li> <li><a href="/editing/tables">Tables</a></li> <li><a href="/editing/tooltips">Tooltips</a></li> <li><a href="/editing/videos">Videos</a></li> <li><a href="/editing/whitespace">Whitespace</a></li> </ul></details></li> <!-- Contribute/Editing the Wiki --> </ul></details></li> <!-- Contribute --> <li><details><summary><a href="/discuss">Discuss</a></summary><ul> <li><a href="/discuss/bugs">Reporting Issues</a></li> <li><a href="/discuss/mailing-lists">Mailing Lists</a></li> <li><a href="/discuss/chat">Chat</a></li> </ul></details></li> <!-- Discuss --> <li><details><summary>Explore</summary><ul> <li><a href="/news">News</a></li> <li><details><summary><a href="/events">Events</a></summary><ul> <li><a href="/events/presentations">Presentations</a></li> <li><a href="/events/conferences">Conferences</a></li> <li><a href="/events/hackathons">Hackathons</a></li> <li><a href="/events">More...</a></li> </ul></details></li> <!-- Discuss/Events --> <li><details><summary><a href="/libs">Libraries</a></summary><ul> <li><a href="/libs/imagej-ops">ImageJ Ops</a></li> <li><a href="/libs/imagej-common">ImageJ Common</a></li> <li><a href="/libs/imagej-legacy">ImageJ Legacy</a></li> <li><a href="/libs/scijava">SciJava</a></li> <li><a href="/libs/scifio">SCIFIO</a></li> <li><details><summary><a href="/libs/imglib2">ImgLib2</a></summary><ul> <li><a href="/libs/imglib2/getting-started">Getting Started</a></li> <li><a href="/libs/imglib2/accessors">Accessors</a></li> <li><a href="/libs/imglib2/accessibles">Accessibles</a></li> <li><a href="/libs/imglib2/examples">Examples</a></li> <li><a href="/libs/imglib2/workshop-introductory">Introductory Workshop</a></li> <li><a href="/libs/imglib2/workshop-advanced">Advanced Workshop</a></li> <li><a href="/libs/imglib2/matlab">ImgLib2 images in MATLAB</a></li> <li><a href="/libs/imglib2/benchmarks">Benchmarks</a></li> <li><a href="/libs/imglib2/faq">FAQ</a></li> <li><a href="/libs/imglib2/developing">Developing ImgLib2</a></li> <li><a href="/libs/imglib2/discussion">ImgLib2 Discussion</a></li> </ul></details></li> <!-- Explore/Libraries/ImgLib2 --> <li><a href="/libs">More...</a></li> </ul></details></li> <!-- Explore/Libraries --> <li><details><summary><a href="/software">Software</a></summary><ul> <li><a href="/software/nih-image">NIH Image</a></li> <li><a href="/software/imagej">ImageJ</a></li> <li><a href="/software/imagej2">ImageJ2</a></li> <li><a href="/software/fiji">Fiji</a></li> <li><a href="/software">More...</a></li> </ul></details></li> <!-- Explore/Software --> </ul></details></li> <!-- Explore --> </ul> </div> </ul> </div> </nav> <div id="dock-overlay-left" class="dock-overlay" data-dock-target="left-column"></div> <div id="dock-overlay-right" class="dock-overlay" data-dock-target="right-column"></div> <!-- Search results --> <div id="search-results"> <div id="search-hits"></div> <div id="pagination"></div> </div> <!-- Scripts --> <!-- Libraries --> <script src="/assets/js/jquery.min.js"></script> <script src="/assets/js/jquery.scrolly.min.js"></script> <script src="/assets/js/browser.min.js"></script> <script src="/assets/js/breakpoints.min.js"></script> <script src="/assets/js/util.js"></script> <script src="/assets/js/jquery.toc.js"></script> <script src="/assets/js/lightbox.min.js"></script> <!-- Extensions --> <!-- Site code --> <script src="/assets/js/main.js"></script> <script src="/assets/js/dock.js"></script> <script src="/assets/js/code.js"></script> <!-- Anchors --> <script src="https://cdn.jsdelivr.net/npm/anchor-js/anchor.min.js"></script> <script>anchors.add('#page h1, #page h2, #page h3, #page h4, #page h5, #page h6');</script> <!-- Citations --> <script src="https://cdn.jsdelivr.net/npm/citation-js@0.4.0-9"></script> <script src="/assets/js/cite.js"></script> <!-- Search --> <script src="https://cdn.jsdelivr.net/npm/algoliasearch@4.13.0/dist/algoliasearch-lite.umd.js"></script> <script src="https://cdn.jsdelivr.net/npm/instantsearch.js@4.40.3/dist/instantsearch.production.min.js"></script> <script src="/assets/js/search.js"></script> <script src="/assets/js/search-tweaks.js"></script> </body> </html>

Pages: 1 2 3 4 5 6 7 8 9 10